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Journal articles on the topic 'Microtranscriptome'

Author: Grafiati
Published: 4 June 2021
Last updated: 14 February 2022

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1

Yuen, Tony, Frederique Ruf, Tearina Chu, and Stuart C. Sealfon. "Microtranscriptome regulation by gonadotropin-releasing hormone." Molecular and Cellular Endocrinology 302, no. 1 (2009): 12–17. http://dx.doi.org/10.1016/j.mce.2008.12.013.

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2

Limothai, Umaporn, Janejira Dinhuzen, Titipon Payongsri, et al. "Circulating microtranscriptome profiles reveal distinct expression of microRNAs in severe leptospirosis." PLOS Neglected Tropical Diseases 14, no. 11 (2020): e0008809. http://dx.doi.org/10.1371/journal.pntd.0008809.

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Biomarkers to predict the severity of leptospirosis are still lacking. This study aimed to identify and validate microRNAs in patients with severe leptospirosis, that could potentially be used as biomarkers for predicting an unfavorable outcome. Serum samples were collected from participants with definite diagnosis of leptospirosis. The participants were divided into two groups, non-severe and severe leptospirosis, as defined by the Specific Organ Sequential Organ Failure (SOFA) Score of more than two in any organ. Microtranscriptome analysis was performed using the NanoString miRNA Expression
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3

Silva, Renan Gonçalves da, Thiago Mateus Rosa-Santos, Suzelei de Castro França, Pratibha Kottapalli, Kameswara Rao Kottapalli, and Sonia Marli Zingaretti. "Microtranscriptome analysis of sugarcane cultivars in response to aluminum stress." PLOS ONE 14, no. 11 (2019): e0217806. http://dx.doi.org/10.1371/journal.pone.0217806.

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4

Gentile, Agustina, Thaís H. Ferreira, Raphael S. Mattos, et al. "Effects of drought on the microtranscriptome of field-grown sugarcane plants." Planta 237, no. 3 (2012): 783–98. http://dx.doi.org/10.1007/s00425-012-1795-7.

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5

Hicks, Steven, Neil Khurana, Daria LaRocca, et al. "COMBINED ANALYSIS OF THE ORAL MICROBIOME AND MICROTRANSCRIPTOME OF AUTISM SPECTRUM DISORDER." European Neuropsychopharmacology 29 (2019): S961—S962. http://dx.doi.org/10.1016/j.euroneuro.2017.08.321.

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6

Desgagné, Véronique, Renée Guérin, Simon-Pierre Guay, et al. "Human high-density lipoprotein microtranscriptome is unique and suggests an extended role in lipid metabolism." Epigenomics 11, no. 8 (2019): 917–34. http://dx.doi.org/10.2217/epi-2018-0161.

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7

Djami-Tchatchou, Arnaud T., and Ian A. Dubery. "Lipopolysaccharide perception leads to dynamic alterations in the microtranscriptome of Arabidopsis thaliana cells and leaf tissues." BMC Plant Biology 15, no. 1 (2015): 79. http://dx.doi.org/10.1186/s12870-015-0465-x.

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8

Garcia, Leandro Encarnação, Erivelto Corrêa de Araújo Junior, Larissa Martins Melo, et al. "Characterization of the microtranscriptome of macrophages infected with virulent, attenuated and saprophyte strains of Leptospira spp." PLOS Neglected Tropical Diseases 12, no. 7 (2018): e0006621. http://dx.doi.org/10.1371/journal.pntd.0006621.

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9

Ortiz-Morea, Fausto A., Renato Vicentini, Geraldo F. F. Silva, et al. "Global analysis of the sugarcane microtranscriptome reveals a unique composition of small RNAs associated with axillary bud outgrowth." Journal of Experimental Botany 64, no. 8 (2013): 2307–20. http://dx.doi.org/10.1093/jxb/ert089.

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10

Kondelova, Alexandra, Begoña Alburquerque-González, Petra Vychytilova-Faltejskova, et al. "miR-181a-2* expression is different amongst carcinomas from the colorectal serrated route." Mutagenesis 35, no. 3 (2019): 233–41. http://dx.doi.org/10.1093/mutage/gez039.

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Abstract Serrated adenocarcinoma (SAC) and colorectal carcinomas showing histological and molecular features of high-level of microsatellite instability (hmMSI-H) are both end points of the serrated pathway of colorectal carcinogenesis. Despite common features (right-sided location, CpG island methylation phenotype and BRAF mutation) there are no studies comparing the microRNA (miRNA) expression profiles in SACs and hmMSI-H. The microtranscriptome from 12 SACs and 8 hmMSI-H were analysed using Affymetrix GeneChip miRNA 3.0 arrays and differentially enriched functions involving immune response
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11

Bubici, Giovanni, Maria Isabella Prigigallo, Francesca Garganese, Francesco Nugnes, Maurice Jansen, and Francesco Porcelli. "First Report of Aleurocanthus spiniferus on Ailanthus altissima: Profiling of the Insect Microbiome and MicroRNAs." Insects 11, no. 3 (2020): 161. http://dx.doi.org/10.3390/insects11030161.

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We report the first occurrence of the orange spiny whitefly (Aleurocanthus spiniferus; OSW) on the tree of heaven (Ailanthus altissima) in Bari, Apulia region, Italy. After our first observation in 2016, the infestation recurred regularly during the following years and expanded to the neighboring trees. Since then, we have also found the insect on numerous patches of the tree of heaven and other plant species in the Bari province. Nevertheless, the tree of heaven was not particularly threatened by the insect, so that a possible contribution by OSW for the control of such an invasive plant cann
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12

Alaba, Sylwia, Pawel Piszczalka, Halina Pietrykowska, et al. "The liverwort P ellia endiviifolia shares microtranscriptomic traits that are common to green algae and land plants." New Phytologist 206, no. 1 (2014): 352–67. http://dx.doi.org/10.1111/nph.13220.

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13

Elchaninov, Andrey, Maria Nikitina, Polina Vishnyakova, et al. "Macro- and microtranscriptomic evidence of the monocyte recruitment to regenerating liver after partial hepatectomy in mouse model." Biomedicine & Pharmacotherapy 138 (June 2021): 111516. http://dx.doi.org/10.1016/j.biopha.2021.111516.

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14

Piasecka, Agnieszka, Michał Sekrecki, Michał Wojciech Szcześniak, and Krzysztof Sobczak. "MEF2C shapes the microtranscriptome during differentiation of skeletal muscles." Scientific Reports 11, no. 1 (2021). http://dx.doi.org/10.1038/s41598-021-82706-2.

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AbstractMyocyte enhancer factor 2C (MEF2C) is a transcription factor that regulates heart and skeletal muscle differentiation and growth. Several protein-encoding genes were identified as targets of this factor; however, little is known about its contribution to the microtranscriptome composition and dynamics in myogenic programs. In this report, we aimed to address this question. Deep sequencing of small RNAs of human muscle cells revealed a set of microRNAs (miRNAs), including several muscle-specific miRNAs, that are sensitive to MEF2C depletion. As expected, in cells with knockdown of MEF2C
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15

Pacak, Andrzej Miroslaw, Katarzyna Kruszka, Aleksandra Świda-Barteczka, et al. "Developmental changes in barley microRNA expression profiles coupled with miRNA targets analysis." Acta Biochimica Polonica 63, no. 4 (2017). http://dx.doi.org/10.18388/abp.2016_1347.

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MicroRNAs are 18-24 nt long single stranded RNAs that are crucial regulators of gene expression and control plant development and response to environmental cues. We have analyzed microtranscriptomes of five barley developmental stages. Generally during barley development miR168-3p, miR1432-5p levels increase and miR156-5p, miR169-3p decrease. We have identified two miR156-5p izomiRs (called 5’U miR156-5p - 20 nt and 5’UU miR156-5p - 21 nt), which were differently expressed during barley development. 5’ U miR156-5p level decreased in 3-week, 6-week and 68-day old barley, when compared to 1-week
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16

Esteban-Gil, Angel, Fernando Pérez-Sanz, José García-Solano, et al. "ColPortal, an integrative multiomic platform for analysing epigenetic interactions in colorectal cancer." Scientific Data 6, no. 1 (2019). http://dx.doi.org/10.1038/s41597-019-0198-z.

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Abstract Colorectal cancer (CRC) is the third leading cause of cancer mortality worldwide. Different pathological pathways and molecular drivers have been described and some of the associated markers are used to select effective anti-neoplastic therapy. More recent evidence points to a causal role of microbiota and altered microRNA expression in CRC carcinogenesis, but their relationship with pathological drivers or molecular phenotypes is not clearly established. Joint analysis of clinical and omics data can help clarify such relations. We present ColPortal, a platform that integrates transcr
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