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Relevant bibliographies by topics / Physarum polycephalum

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Academic literature on the topic 'Physarum polycephalum'

Author: Grafiati

Published: 4 June 2021

Last updated: 30 July 2024

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Journal articles on the topic "Physarum polycephalum"

1

Cai, Zhengying, Gengze Li, Jinming Zhang, and Shasha Xiong. "Using an Artificial Physarum polycephalum Colony for Threshold Image Segmentation." Applied Sciences 13, no. 21 (2023): 11976. http://dx.doi.org/10.3390/app132111976.

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Traditional artificial intelligence algorithms are prone to falling into local optima when solving threshold segmentation problems. Here, a novel artificial Physarum polycephalum colony algorithm is proposed to help us solve the difficult problem. First, the algorithm methodology of an artificial Physarum polycephalum colony algorithm is described to search for the optimal solutions by expansion and contraction of a lot of artificial hyphae. Different artificial Physarum polycephalum can learn from each other and produce more hyphae in expansion. In contraction, the artificial Physarum polycephalum colony can select the best hyphae with high fitness through a quick sort algorithm, but the other hyphae with low fitness will be absorbed and disappear. Second, a fitness function is modeled based on Kapur’s entropy for the proposed artificial Physarum polycephalum colony algorithm to search for optimal threshold segmentation solutions. Third, a series of benchmark experiments are implemented to test the proposed artificial Physarum polycephalum colony algorithm, and some state-of-the-art approaches are employed for comparison. The experimental results verified that the proposed algorithm can obtain better accuracy and convergence speed, and is not easier to fall into the local optimal solution too early.

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Kscheschinski, Bjoern, Mirna Kramar, and Karen Alim. "Calcium regulates cortex contraction in Physarum polycephalum." Physical Biology 21, no. 1 (2023): 016001. http://dx.doi.org/10.1088/1478-3975/ad0a9a.

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Abstract The tubular network-forming slime mold Physarum polycephalum is able to maintain long-scale contraction patterns driven by an actomyosin cortex. The resulting shuttle streaming in the network is crucial for the organism to respond to external stimuli and reorganize its body mass giving rise to complex behaviors. However, the chemical basis of the self-organized flow pattern is not fully understood. Here, we present ratiometric measurements of free intracellular calcium in simple morphologies of Physarum networks. The spatiotemporal patterns of the free calcium concentration reveal a nearly anti-correlated relation to the tube radius, suggesting that calcium is indeed a key regulator of the actomyosin activity. We compare the experimentally observed phase relation between the radius and the calcium concentration to the predictions of a theoretical model including calcium as an inhibitor. Numerical simulations of the model suggest that calcium indeed inhibits the contractions in Physarum, although a quantitative difference to the experimentally measured phase relation remains. Unraveling the mechanism underlying the contraction patterns is a key step in gaining further insight into the principles of Physarum’s complex behavior.

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Luo, Yandong, Jianwen Guo, Zhenpeng Lao, Shaohui Zhang, and Xiaohui Yan. "Swarm Robot Exploration Strategy for Path Formation Tasks Inspired by Physarum polycephalum." Complexity 2021 (May 19, 2021): 1–17. http://dx.doi.org/10.1155/2021/6698421.

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Physarum polycephalum, a unicellular and multiheaded slime mould, can form highly efficient networks connecting separated food sources during the process of foraging. These adaptive networks exhibit a unique characteristic in that they are optimized without the control of a central consciousness. Inspired by this phenomenon, we present an efficient exploration and navigation strategy for a swarm of robots, which exploits cooperation and self-organisation to overcome the limited abilities of the individual robots. The task faced by the robots consists in the exploration of an unknown environment in order to find a path between two distant target areas. For the proposed algorithm (EAIPP), we experimentally present robustness tests and obstacle tests conducted to analyse the performance of our algorithm and compare the proposed algorithm with other swarm robot foraging algorithms that also focus on the path formation task. This work has certain significance for the research of swarm robots and Physarum polycephalum. For the research of swarm robotics, our algorithm not only can lead multirobot as a whole to overcome the limitations of very simple individual agents but also can offer better performance in terms of search efficiency and success rate. For the research of Physarum polycephalum, this work is the first one combining swarm robots and Physarum polycephalum. It also reveals the potential of the Physarum polycephalum foraging principle in multirobot systems.

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Kippenberger, Stefan, Gordon Pipa, Katja Steinhorst, et al. "Learning in the Single-Cell Organism Physarum polycephalum: Effect of Propofol." International Journal of Molecular Sciences 24, no. 7 (2023): 6287. http://dx.doi.org/10.3390/ijms24076287.

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Propofol belongs to a class of molecules that are known to block learning and memory in mammals, including rodents and humans. Interestingly, learning and memory are not tied to the presence of a nervous system. There are several lines of evidence indicating that single-celled organisms also have the capacity for learning and memory which may be considered as basal intelligence. Here, we introduce a new experimental model for testing the learning ability of Physarum polycephalum, a model organism frequently used to study single-celled “intelligence”. In this study, the impact of propofol on Physarum’s “intelligence” was tested. The model consists of a labyrinth of subsequent bifurcations in which food (oat flakes soaked with coconut oil-derived medium chain triglycerides [MCT] and soybean oil-derived long chain triglycerides [LCT]) or propofol in MCT/LCT) is placed in one of each Y-branch. In this setting, it was tested whether Physarum memorized the rewarding branch. We saw that Physarum was a quick learner when capturing the first bifurcations of the maze; thereafter, the effect decreased, perhaps due to reaching a state of satiety. In contrast, when oat flakes were soaked with propofol, Physarum’s preference for oat flakes declined significantly. Several possible actions, including the blocking of gamma-aminobutyric acid (GABA) receptor signaling, are suggested to account for this behavior, many of which can be tested in our new model.

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Strano, Emanuele, Andrew Adamatzky, and Jeff Jones. "Physarum Itinerae." International Journal of Nanotechnology and Molecular Computation 3, no. 2 (2011): 31–55. http://dx.doi.org/10.4018/jnmc.2011040103.

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The Roman Empire is renowned for sharp logical design and outstanding building quality of its road system. Many roads built by Romans are still used in continental Europe and UK. The Roman roads were built for military transportations with efficiency in mind, as straight as possible. Thus the roads make an ideal test-bed for developing experimental laboratory techniques for evaluating man-made transport systems using living creatures. The authors imitate development of road networks in Iron Age Italy using slime mould Physarum polycephalum. The authors represent ten Roman cities with oat flakes, inoculate the slime mould in Roma, wait as mould spans all flakes-cities with its network of protoplasmic tubes, and analyse structures of the protoplasmic networks. The authors found that most Roman roads, a part of those linking Placentia to Bononia and Genua to Florenzia are represented in development of Physarum polycephalum. Transport networks developed by Romans and by slime mould show similarities of planar proximity graphs, and particular minimum spanning tree. Based on laboratory experiments the authors reconstructed a speculative sequence of road development in Iron Age Italy.

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6

Achhammer, Gunthar, Alexandra Winkler, Bernhard Angerer, and Eggehard Holler. "DNA polymerase ? of Physarum polycephalum." Current Genetics 28, no. 6 (1995): 534–45. http://dx.doi.org/10.1007/bf00518166.

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Adamatzky, Andrew. "Manipulating substances with Physarum polycephalum." Materials Science and Engineering: C 30, no. 8 (2010): 1211–20. http://dx.doi.org/10.1016/j.msec.2010.06.020.

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HARDMAN, Norman, and David A. F. GILLESPIE. "DNA Replication in Physarum polycephalum." European Journal of Biochemistry 106, no. 1 (2005): 161–67. http://dx.doi.org/10.1111/j.1432-1033.1980.tb06007.x.

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Taylor, Randolph W., and Henrie Treadwell. "A freeze-fracture-etched study of the physarum polycephalum plasma membrane during early formation of the macroplasmodial stage." Proceedings, annual meeting, Electron Microscopy Society of America 51 (August 1, 1993): 346–47. http://dx.doi.org/10.1017/s0424820100147570.

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The plasma membrane of the Slime Mold, Physarum polycephalum, process unique morphological distinctions at different stages of the life cycle. Investigations of the plasma membrane of P. polycephalum, particularly, the arrangements of the intramembranous particles has provided useful information concerning possible changes occurring in higher organisms. In this report Freeze-fracture-etched techniques were used to investigate 3 hours post-fusion of the macroplasmodia stage of the P. polycephalum plasma membrane.Microplasmodia of Physarum polycephalum (M3C), axenically maintained, were collected in mid-expotential growth phase by centrifugation. Aliquots of microplasmodia were spread in 3 cm circles with a wide mouth pipette onto sterile filter paper which was supported on a wire screen contained in a petri dish. The cells were starved for 2 hrs at 24°C. After starvation, the cells were feed semidefined medium supplemented with hemin and incubated at 24°C. Three hours after incubation, samples were collected randomly from the petri plates, placed in plancettes and frozen with a propane-nitrogen jet freezer.

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Werner-Felmayer, G., G. Golderer, E. R. Werner, P. Gröbner, and H. Wachter. "Pteridine biosynthesis and nitric oxide synthase in Physarum polycephalum." Biochemical Journal 304, no. 1 (1994): 105–11. http://dx.doi.org/10.1042/bj3040105.

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Physarum polycephalum, an acellular slime mould, serves as a model system to study cell-cycle-dependent events since nuclear division is naturally synchronous. This organism was shown to release isoxanthopterin which is structurally related to tetrahydrobiopterin, a cofactor of aromatic amino acid hydroxylases and of nitric oxide synthases (NOSs) (EC 1.14.13.39). Here, we studied Physarum pteridine biosynthesis in more detail and found that high amounts of tetrahydrobiopterin are produced and NOS activity is expressed. Physarum pteridine biosynthesis is peculiar in as much as 7,8-dihydroneopterin aldolase (EC 4.1.2.25), an enzyme of folic acid biosynthesis usually not found in organisms producing tetrahydrobiopterin, is detected in parallel. NOS purified from Physarum depends on NADPH, tetrahydrobiopterin and flavins. Enzyme activity is independent of exogenous Ca2+ and is inhibited by arginine analogues. The purified enzyme (with a molecular mass of 130 kDa) contains tightly bound tetrahydrobiopterin and flavins. During the synchronous cell cycle of Physarum, pteridine biosynthesis increases during S-phase whereas NOS activity peaks during mitosis, drops at telophase and peaks again during early S-phase. Our results characterize Physarum pteridine biosynthesis and NOS and suggest a possible link between NOS activity and mitosis.

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Dissertations / Theses on the topic "Physarum polycephalum"

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Lépine, Guylaine. "Étude des gènes de la famille HAP chez Physarum polycephalum." Master's thesis, Université Laval, 1989. http://hdl.handle.net/20.500.11794/57512.

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Lagnel, Claire. "Caractérisation d'origines de réplication de Physarum polycephalum." Thesis, National Library of Canada = Bibliothèque nationale du Canada, 1998. http://www.collectionscanada.ca/obj/s4/f2/dsk2/ftp02/NQ36289.pdf.

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Hugodot, Yannick. "Topoisomérase II : le modèle de physarum polycephalum." Paris 11, 2003. http://www.theses.fr/2003PA112178.

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Les ADN-topoisomérases de type II sont des enzymes essentielles, capables de modifier la topologie de l'ADN en coupant transitoirement la double hélice, et susceptibles d'intervenir dans la plupart des processus de lecture ou de copie de l'information génétique. Toutefois, si leurs propriétés catalytiques sont bien caractérisées in vitro, leur activité et leur mode de régulation in vivo restent à éclaircir. Afin de mieux comprendre le rôle de ces enzymes au cours du cycle, cellulaire, nous avons choisi Physarum polycephalum, un organisme eucaryote capable de former une cellule syncitiale géante dont les millions de noyaux sont naturellement synchrones. En utilisant le CP-115, 953, un inhibiteur spécifique de la topoisomérase II, nous avons cartographié les sites de clivage par l'enzyme dans la région du gène codant pour la profiline P: tous les sites détectés se localisent dans la région 5' du gène, mais ne semblent corrélés ni avec la courbure de l'ADN, ni avec sa thermostabilité. La proportion maximale de clivage observée en mitose suggère l'implication de la topoisomérase II dans la ségrégation des chromosomes. Nous avons également identifié la séquence codante de l'enzyme de Physarum en criblant une banque d'ADN complémentaire et par la technique de 3' RACE. Cette topoisomérase II contient tous les motifs caractéristiques de ses homologues eucaryotes, à deux différences près: un domaine C-terminal plus court, et une extension N-terminale atypique potentiellement impliquée dans la régulation ou la localisation de l'enzyme. Nous avons déterminé que le gène codant pour cette enzyme est répliqué au début de la phase S par deux fourches de réplication convergentes qui générent un signal de terminaison au cœur de la région transcrite. Les tentatives d'expression de la protéine dans E. Coli, destinées à étudier les paramètres biochimiques de l'enzyme et à permettre la synthèse d'anticorps spécifiques, n'ont pas permis de produite cette enzyme sous une forme soluble<br>Type II DNA-topoisomerases are essential enzymes that cut transiently the double helix of DNA. Their ability to modify DNA topology suggests their implication in various processes like transciption and replication. Although their catalytic properties are well established in vitro, their activity and regulation in vivo is not fully characterized. In order to understand the role of these enzymes during the cell cycle, we choose Physarum polycephalum, an eukaryotic organism that is able to form a syncitium containing millions of naturally synchronous nuclei. We mapped the cleavage sites of topoisomerase II at the profilin P gene locus, using CP- 115,953, a specific inhibitor of this enzyme. All the detected sites are localized in the 5' region of the gene, but do not seem to correlate neither with DNA curvature nor its thermostability. We found an increased intensity of cleavage during mitosis, suggesting a role for topoisomerase II in chromosome segregation. We also identified the coding sequence of the enzyme of Physarum through the screening of a cDNA library and the use of a 3' RACE approach. The predicted amino-acid sequence shares similarity with those of other eukaryots, however, it contains a shortened C-terminal domain and an atypica1 N-terminal extension, which function remains unknown. We established that the corresponding gene is replicated early during S-phase and that two converging replication, forks generate a termination signal inside the transcribed region. Finally, in order to study the biochemical properties of the enzyme, we tried to express the topoisomerase II of Physarum in E. Coli. Unfortunately, all the attempts resulted in the expression of an insoluble protein

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Foote, A. M. "Deuteration studies and histone H1 from Physarum polycephalum." Thesis, University of Portsmouth, 1985. http://ethos.bl.uk/OrderDetails.do?uin=uk.bl.ethos.354971.

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Swanston, Emma. "A study of developmentally regulated genes in Physarum polycephalum." Thesis, University of Leicester, 2000. http://hdl.handle.net/2381/30332.

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In the life cycle of the Protist, Physarum polycephalum, uninucleate amoebae develop into multinucleate, syncytial plasmodia via an irreversible development transition. Previously a subtracted cDNA library was screened and a novel class of genes was identified that were expressed primarily during development. These genes were called red genes (regulated in development). My first aim was to identify and characterise more red genes. I isolated two partial cDNA clones, D11/1100 (redE) and A18/1020 (mynD). Northern blotting showed that both of the genes represented red genes; for redE this was confirmed by RT-PCR. Southern blotting showed that redE is a single-copy gene, while mynD is a single-copy gene that is a member of a gene family. A18/1020 was renamed mynD (myosin developmental) because database searches showed that the cDNA encodes part of the tail domain of a type II myosin heavy-chain protein. The complete redE coding sequence, plus some of the upstream promoter sequence was obtained by cloning a genomic restriction fragment. Database searches showed that the deduced RedE protein was not homologous to any known proteins, although it contained several potential phosphorylation and glycosylation sites. Thus, the function of RedE is unknown. As a first step towards investigating red gene function, I attempted to make a vector that would allow the manipulation of gene expression. My second aim was to examine the replication of the red genes in the plasmodial S-phase because genes that are expressed at low levels in the plasmodium had not previously been studied. I showed that redE is replicated in early S-phase, and that two previously discovered red genes, redA and redB, are replicated in mid and early S-phase respectively.

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Michie, F. B. "A study of developmentally-regulated mRNA populations in Physarum polycephalum." Thesis, University of Aberdeen, 1987. http://ethos.bl.uk/OrderDetails.do?uin=uk.bl.ethos.382870.

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Methods for the isolation of pure, intact <i>Physarum</i> polysomal RNA have been employed to obtain polyadenylated RNA. <i>Physarum</i> polyadenylated RNA isolated by these methods has been demonstrated to be suitable for use as a template for the synthesis of <i>Physarum</i> single-stranded cDNA. These molecules ranged in size from 100--2000 nucleotides. The enzyme steps involved in the synthesis and cloning of double-stranded cDNA were investigated individually to determine the optimum reaction conditions. A globin mRNA template was employed to analyse conditions for single and double-stranded cDNA synthesis. It was demonstrated that synthesis of the second cDNA strand, S1 Nuclease treatment, and synthesis of homopolymer tracts are inefficient and variable features of the standard cDNA protocols employed at the time of the study. These difficulties have been reported by other workers, and it has been suggested as a result that alternative methods of cDNA synthesis and cloning should be employed. Several cDNA clones, obtained from a limited <i>Physarum</i> cDNA library, were analysed in detail. One, pPCF2, was demonstrated to hybridize to methylated, repetitive <i>Physarum</i> DNA by Southern hybridization. Therefore in this instance, methylation of CpG sequences, which has been implicated in the negative regulation of gene expression, did not inhibit transcription of DNA containing these sequences, as has been proposed. The DNA sequence which hybridized to pPCF2 contained internal, methylated sequences, and was not methylated at the flanking restriction endonuclease recognition sites. This is consistent with observations that methylation at the 5' promoter region of the gene, inhibits expression of that gene, while methylation of the structural region does not. Another <i>Physarum</i> cDNA clone, pPCF3, was demonstrated to hybridize exclusively to undermethylated, repetitive <i>Physarum</i> DNA sequences. A hypermethylated, highly repetitive, cloned <i>Physarum</i> DNA sequence, pPH29, was shown to hybridize to cytoplasmic and polysomal RNA. Recently, pPH29 has been identified as the middle sequence of a putative transposon-like element. Such elements are believed to transpose via an RNA intermediate, which is reverse-transcribed into cDNA. The demonstration that pPH29 hybridizes to <i>Physarum</i> RNA provides further evidence, in conjunction with structural information, that it may form part of a transposable element.

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Lucchini, Renzo. "Chromatin structure of the extrachromosomal ribosomal DNA of physarum polycephalum /." Zürich, 1986. http://e-collection.ethbib.ethz.ch/show?type=diss&nr=8123.

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Glyn, Matthew. "Cytoskeletal and associated modifications in Physarum polycephalum myxamoebae and flagellates." Thesis, University of Kent, 1989. http://ethos.bl.uk/OrderDetails.do?uin=uk.bl.ethos.329328.

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Bailey, Juliet A. "Analysis of cellular events during plasmodium development in Physarum polycephalum." Thesis, University of Leicester, 1989. http://hdl.handle.net/2381/35072.

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In Physarum polycephalum, uninucleate, haploid amoebae develop into multinucleate syncytial plasmodia. Plasmodium development is controlled by the mating-type locus matA. Sexual development involves the fusion of pairs of amoebae carrying different alleles of matA; fusion between amoebae carrying the same allele of matA does not lead to plasmodium formation. Apogamic development is caused by mutations at this locus. Time-lapse cinematographic analysis of matA-heteroallelic and matA-homoallelic cultures indicated that amoebae were able to fuse at any age. In matA-heteroallelic cultures, amoebal fusion was followed by nuclear fusion, in interphase, to give a diploid zygote. The zygote underwent an extended period of growth before forming a binucleate plasmodium by mitosis unaccompanied by cytokinesis. During this cell cycle, the cells lost the ability to transform into flagellates and became irreversibly committed to development. Immunofluorescence microscopy showed that the change from amoebal to plasmodial microtubule organisation began during this cell cycle. In matA-homoallelic fusion cells, the cell cycle was not extended and there were no alterations in microtubule organisation. In apogamic strains, single haploid amoebae could develop into haploid plasmodia; developing amoebae entered an extended cell cycle ending in the formation of a binucleate plasmodium. As in sexual development, growth continued during this cell cycle, ability to undergo the amoeba-flagellate transformation was lost, the developing cell became committed to development and microtubule organisation began to alter. Development was analysed in two apogamic strains carrying additional mutations blocking plasmodium development. In both strains, development began with an extended cell cycle, leading to the formation of a binucleate plasmodium; development became abnormal shortly after this time. In one strain, the mutation had apparently affected the cytoskeleton or the cell membrane. In the other strain, nuclear structure appeared to be affected by the mutation.

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Blindt, Adrian B. "Changes in cellular organisation during apogamic development in Physarum polycephalum." Thesis, University of Leicester, 1987. http://hdl.handle.net/2381/34382.

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Amoebae of strain CL of Physarum polycephalum undergo apogamic development to form multinucleate plasmodia. During the amoebal-plasmodial transition, large uninucleate cells become irreversibly committed to plasmodium development. The transformation of an amoeba to a plasmodium involves a change in the tubulin isotypes expressed and a radical restructuring of cellular microtubules. During the transition the amoebal cytoplasmic microtubules, centrioles and cytoplasmic MTOC must disappear and the plasmodial-specific tubulin isotypes and intranuclear microtubule organising centre (MTOC) must be acquired. In developing cultures, amoebae lose the ability to flagellate before they become committed. Enriched suspensions of committed cells can be obtained by inducing asynchronous differentiating cultures to flagellate and passing the cells through a glass bead column. The resulting committed cells can be cultured, with some synchrony, to form plasmodia on bacterial lawns or in axenic liquid medium but cannot be cultured on axenic agar medium. During mating, cells lose the ability to flagellate early in plasmodium development. Committed cells from mating mixtures can be enriched in a similar way to committed cells of CL and have similar growth characteristics. Uninucleate committed cells of CL have the same DNA content as amoebae and plasmodia but have 6-10 times the amount of RNA. Apogamic committed cells express tubulin isotypes characteristic of amoebae, but after culture in axenic liquid medium, the cells express plasmodial-specific tubulin isotypes. Results suggest that plasmodial-specific tubulin isotypes are switched on in quadrinucleate cells. The amoebal cytoskeleton persists in binucleate and quadrinucleate cells but has disappeared in larger multinucleate cells. Mitosis in uninucleate committed cells is intranuclear (plasmodial-type). The amoebal MTOCs are eliminated during the first few mitotic cycles after commitment and do not become the plasmodial intranuclear MTOCs. Centriole loss apparently occurs before MTOC loss.

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Books on the topic "Physarum polycephalum"

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Dove, William F., Jennifer Dee, Sadashi Hatano, Finn B. Haugli, and Karl-Ernst Wohlfarth-Bottermann, eds. The Molecular Biology of Physarum polycephalum. Springer New York, 1986. http://dx.doi.org/10.1007/978-1-4613-2203-0.

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NATO Advanced Research Workshop on the Molecular Biology of Physarum polycephalum (1985 Madison, Wis.). The molecular biology of Physarum polycephalum. Published in cooperation with NATO Scientific Affairs Division [by] Plenum Press, 1986.

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Innsbruck, Austria) European Physarum Workshop (10th 1992. Molecular and cell biology of Physarum polycephalum: 10th European Physarum Workshop, Innsbruck (Igls), Austria, April 7-12, 1992 : abstracts. University of Innsbruck, 1992.

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Foote, Alison Mary. Deuteration studies and histone H1 from Physarum polycephalum. Portsmouth Polytechnic, Dept. of Biological Sciences, 1985.

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Poetsch, Bettina. Zur Expression und Funktion von Aktin und Tubulin in der Photomorphogenese von Physarum polycephalum. Intemann, 1989.

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Stone, Graham Robert. Studies of the nucleosome core particle structure in Physarum polycephalum. Portsmouth Polytechnic, Dept. of Biological Sciences, 1985.

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Dussutour, Audrey. Tout ce que vous avez toujours voulu savoir sur le blob sans jamais oser le demander. Équateurs, 2017.

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Sutela, Jenna. Orgs: From slime mold to Silicon Valley and beyond. Garret Publications, 2017.

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Heads, Richard John. Studies on a putative H1℗ʻ-like protein linked to growth and differentiation in Physarum polycephalum. Portsmouth Polytechnic, School of Biological Sciences, 1989.

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Haugli, Finn B., Karl-Ernst Wohlfarth-Bottermann, Sadashi Hatano, William F. Dove, and Jennifer Dee. Molecular Biology of Physarum Polycephalum. Springer, 2012.

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Book chapters on the topic "Physarum polycephalum"

1

Schomburg, Dietmar, and Margit Salzmann. "Physarum polycephalum ribonuclease." In Enzyme Handbook 3. Springer Berlin Heidelberg, 1991. http://dx.doi.org/10.1007/978-3-642-76463-9_178.

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Jones, Jeff. "Slime Mould Physarum Polycephalum." In From Pattern Formation to Material Computation. Springer International Publishing, 2015. http://dx.doi.org/10.1007/978-3-319-16823-4_2.

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Sauer, Helmut W. "Introduction to Physarum." In The Molecular Biology of Physarum polycephalum. Springer New York, 1986. http://dx.doi.org/10.1007/978-1-4613-2203-0_1.

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Sperry, Megan M., Nirosha J. Murugan, and Michael Levin. "Studying Protista WBR and Repair Using Physarum polycephalum." In Methods in Molecular Biology. Springer US, 2022. http://dx.doi.org/10.1007/978-1-0716-2172-1_3.

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AbstractPhysarum polycephalum is a protist slime mould that exhibits a high degree of responsiveness to its environment through a complex network of tubes and cytoskeletal components that coordinate behavior across its unicellular, multinucleated body. Physarum has been used to study decision making, problem solving, and mechanosensation in aneural biological systems. The robust generative and repair capacities of Physarum also enable the study of whole-body regeneration within a relatively simple model system. Here we describe methods for growing, imaging, quantifying, and sampling Physarum that are adapted for investigating regeneration and repair.

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Burland, Timothy G. "Genetic Analysis in Physarum polycephalum." In The Molecular Biology of Physarum polycephalum. Springer New York, 1986. http://dx.doi.org/10.1007/978-1-4613-2203-0_2.

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Bernitt, E., C. Oettmeier, and H. G. Döbereiner. "Microplasmodium Dynamics of Physarum Polycephalum." In IFMBE Proceedings. Springer Berlin Heidelberg, 2010. http://dx.doi.org/10.1007/978-3-642-14515-5_288.

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Gott, Jonatha M., and Amy C. Rhee. "Insertion/Deletion Editing in Physarum polycephalum." In Nucleic Acids and Molecular Biology. Springer Berlin Heidelberg, 2008. http://dx.doi.org/10.1007/978-3-540-73787-2_4.

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Dove, William F., and Keith Gull. "Physarum as an Integrated Experimental Organism." In The Molecular Biology of Physarum polycephalum. Springer New York, 1986. http://dx.doi.org/10.1007/978-1-4613-2203-0_26.

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Hardman, Norman. "Molecular Organization of the Physarum Genome." In The Molecular Biology of Physarum polycephalum. Springer New York, 1986. http://dx.doi.org/10.1007/978-1-4613-2203-0_3.

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Kohama, Kazuhiro, and Setsuro Ebashi. "Inhibitory Ca2+-Regulation of the Physarum Actomyosin System." In The Molecular Biology of Physarum polycephalum. Springer New York, 1986. http://dx.doi.org/10.1007/978-1-4613-2203-0_10.

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Conference papers on the topic "Physarum polycephalum"

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Dimonte, Alice, Tatiana Berzina, and Victor Erokhin. "Physarum Polycephalum changes polyaniline properties." In European Conference on Artificial Life 2015. The MIT Press, 2015. http://dx.doi.org/10.7551/978-0-262-33027-5-ch005.

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Dimonte, Alice, Tatiana Berzina, and Victor Erokhin. "Physarum Polycephalum changes polyaniline properties." In European Conference on Artificial Life 2015. The MIT Press, 2015. http://dx.doi.org/10.1162/978-0-262-33027-5-ch005.

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Dimonte, Alice, Tatiana Berzina, and Victor Erokhin. "Basic Transitions of Physarum Polycephalum." In 2015 Federated Conference on Computer Science and Information Systems. IEEE, 2015. http://dx.doi.org/10.15439/2015f237.

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Dimonte, Alice, Agostine Romeo, Giuseppe Tarabella, Pasquale D'Angelo, Victory Erokhin, and Salvatore Iannotta. "Interfacing physarum polycephalum with organic memristors." In 2015 International Conference on Memristive Systems (MEMRISYS). IEEE, 2015. http://dx.doi.org/10.1109/memrisys.2015.7378381.

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Schumann, Andrew. "Reversible logic gates on Physarum Polycephalum." In PROCEEDINGS OF THE INTERNATIONAL CONFERENCE ON NUMERICAL ANALYSIS AND APPLIED MATHEMATICS 2014 (ICNAAM-2014). AIP Publishing LLC, 2015. http://dx.doi.org/10.1063/1.4912819.

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Schumann, Andrew. "Non-linear permutation groups on Physarum polycephalum." In 2014 2nd International Conference on Systems and Informatics (ICSAI). IEEE, 2014. http://dx.doi.org/10.1109/icsai.2014.7009294.

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Schumann, Andrew. "Go Games on Plasmodia of Physarum Polycephalum." In 2015 Federated Conference on Computer Science and Information Systems. IEEE, 2015. http://dx.doi.org/10.15439/2015f236.

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Lee, Jonghyun, Christina Oettmeier, and Hans-Günther Döbereiner. "Growth pattern of Physarum polycephalum during starvation." In 9th EAI International Conference on Bio-inspired Information and Communications Technologies (formerly BIONETICS). ACM, 2016. http://dx.doi.org/10.4108/eai.3-12-2015.2262481.

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Shirakawa, Tomohiro. "Anticipatory Behavior and Intracellular Communication in Physarum polycephalum." In COMPUTING ANTICIPATORY SYSTEMS: CASYS'05 - Seventh International Conference. AIP, 2006. http://dx.doi.org/10.1063/1.2216665.

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Ehrlich, Drew, Milad Hakimshafaei, and Oskar Elek. "Scaffolding Generation using a 3D Physarum Polycephalum Simulation." In SCF '22: Symposium on Computational Fabrication. ACM, 2022. http://dx.doi.org/10.1145/3559400.3565590.

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