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Articles de revues sur le sujet « Plant viruses Genetics »

Auteur : Grafiati

Publié le 4 juin 2021

Mis à jour le 25 janvier 2023

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1

Fraser, R. S. S. "The Genetics of Resistance to Plant Viruses." Annual Review of Phytopathology 28, no. 1 (September 1990): 179–200. http://dx.doi.org/10.1146/annurev.py.28.090190.001143.

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2

de Jager, C. P. "Plant resistance to viruses." Physiological and Molecular Plant Pathology 36, no. 3 (March 1990): 265–66. http://dx.doi.org/10.1016/0885-5765(90)90032-s.

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3

Elena, Santiago F., Stéphanie Bedhomme, Purificación Carrasco, José M. Cuevas, Francisca de la Iglesia, Guillaume Lafforgue, Jasna Lalić, Àngels Pròsper, Nicolas Tromas, and Mark P. Zwart. "The Evolutionary Genetics of Emerging Plant RNA Viruses." Molecular Plant-Microbe Interactions® 24, no. 3 (March 2011): 287–93. http://dx.doi.org/10.1094/mpmi-09-10-0214.

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Over the years, agriculture across the world has been compromised by a succession of devastating epidemics caused by new viruses that spilled over from reservoir species or by new variants of classic viruses that acquired new virulence factors or changed their epidemiological patterns. Viral emergence is usually associated with ecological change or with agronomical practices bringing together reservoirs and crop species. The complete picture is, however, much more complex, and results from an evolutionary process in which the main players are ecological factors, viruses' genetic plasticity, an

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4

Roossinck, Marilyn J. "Lifestyles of plant viruses." Philosophical Transactions of the Royal Society B: Biological Sciences 365, no. 1548 (June 27, 2010): 1899–905. http://dx.doi.org/10.1098/rstb.2010.0057.

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The vast majority of well-characterized eukaryotic viruses are those that cause acute or chronic infections in humans and domestic plants and animals. However, asymptomatic persistent viruses have been described in animals, and are thought to be sources for emerging acute viruses. Although not previously described in these terms, there are also many viruses of plants that maintain a persistent lifestyle. They have been largely ignored because they do not generally cause disease. The persistent viruses in plants belong to the family Partitiviridae or the genus Endornavirus . These groups also h

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5

Ali, Zahir, and Magdy M. Mahfouz. "CRISPR/Cas systems versus plant viruses: engineering plant immunity and beyond." Plant Physiology 186, no. 4 (May 12, 2021): 1770–85. http://dx.doi.org/10.1093/plphys/kiab220.

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Abstract Molecular engineering of plant immunity to confer resistance against plant viruses holds great promise for mitigating crop losses and improving plant productivity and yields, thereby enhancing food security. Several approaches have been employed to boost immunity in plants by interfering with the transmission or lifecycles of viruses. In this review, we discuss the successful application of clustered regularly interspaced short palindromic repeats (CRISPR)/CRISPR-associated protein (Cas) (CRISPR/Cas) systems to engineer plant immunity, increase plant resistance to viruses, and develop

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6

Marwal, Avinash, and Rajarshi Kumar Gaur. "Host Plant Strategies to Combat Against Viruses Effector Proteins." Current Genomics 21, no. 6 (September 16, 2020): 401–10. http://dx.doi.org/10.2174/1389202921999200712135131.

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Viruses are obligate parasites that exist in an inactive state until they enter the host body. Upon entry, viruses become active and start replicating by using the host cell machinery. All plant viruses can augment their transmission, thus powering their detrimental effects on the host plant. To diminish infection and diseases caused by viruses, the plant has a defence mechanism known as pathogenesis- related biochemicals, which are metabolites and proteins. Proteins that ultimately prevent pathogenic diseases are called R proteins. Several plant R genes (that confirm resistance) and avirulenc

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7

Keese, Paul, and Adrian Gibbs. "Plant viruses: master explorers of evolutionary space." Current Opinion in Genetics & Development 3, no. 6 (January 1993): 873–77. http://dx.doi.org/10.1016/0959-437x(93)90007-c.

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8

Kasschau, Kristin D., and James C. Carrington. "A Counterdefensive Strategy of Plant Viruses." Cell 95, no. 4 (November 1998): 461–70. http://dx.doi.org/10.1016/s0092-8674(00)81614-1.

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9

Kridl, Jean C., and Robert M. Goodman. "Transcriptional regulatory sequences from plant viruses." BioEssays 4, no. 1 (January 1986): 4–8. http://dx.doi.org/10.1002/bies.950040103.

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10

THRESH, J. M. "The ecology of tropical plant viruses." Plant Pathology 40, no. 3 (September 1991): 324–39. http://dx.doi.org/10.1111/j.1365-3059.1991.tb02386.x.

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11

Pierpoint, W. S. "Atlas of plant viruses: Vols I and II." Physiological and Molecular Plant Pathology 33, no. 2 (September 1988): 314–16. http://dx.doi.org/10.1016/0885-5765(88)90034-3.

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12

Johnson, J., T. Lin, and G. Lomonossoff. "PRESENTATION OF HETEROLOGOUS PEPTIDES ON PLANT VIRUSES: Genetics, Structure, and Function." Annual Review of Phytopathology 35, no. 1 (September 1997): 67–86. http://dx.doi.org/10.1146/annurev.phyto.35.1.67.

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13

Feng, Mingfeng, Zhenghe Li, Xiaorong Tao, Xianbing Wang, and Zhike Feng. "Advances in reverse genetics system of plant negative-strand RNA viruses." Chinese Science Bulletin 65, no. 35 (July 25, 2020): 4073–83. http://dx.doi.org/10.1360/tb-2020-0671.

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14

Jensen, D. D. "EFFECTS OF PLANT VIRUSES ON INSECTS*." Annals of the New York Academy of Sciences 105, no. 13 (December 15, 2006): 685–712. http://dx.doi.org/10.1111/j.1749-6632.1963.tb42958.x.

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15

Rai, Avanish, Palaiyur N. Sivalingam, and Muthappa Senthil-Kumar. "A spotlight on non-host resistance to plant viruses." PeerJ 10 (March 31, 2022): e12996. http://dx.doi.org/10.7717/peerj.12996.

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Plant viruses encounter a range of host defenses including non-host resistance (NHR), leading to the arrest of virus replication and movement in plants. Viruses have limited host ranges, and adaptation to a new host is an atypical phenomenon. The entire genotypes of plant species which are imperceptive to every single isolate of a genetically variable virus species are described as non-hosts. NHR is the non-specific resistance manifested by an innately immune non-host due to pre-existing and inducible defense responses, which cannot be evaded by yet-to-be adapted plant viruses. NHR-to-plant vi

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16

Zahmanova, Gergana, Katerina Takova, Rumyana Valkova, Valentina Toneva, Ivan Minkov, Anton Andonov, and Georgi L. Lukov. "Plant-Derived Recombinant Vaccines against Zoonotic Viruses." Life 12, no. 2 (January 21, 2022): 156. http://dx.doi.org/10.3390/life12020156.

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Emerging and re-emerging zoonotic diseases cause serious illness with billions of cases, and millions of deaths. The most effective way to restrict the spread of zoonotic viruses among humans and animals and prevent disease is vaccination. Recombinant proteins produced in plants offer an alternative approach for the development of safe, effective, inexpensive candidate vaccines. Current strategies are focused on the production of highly immunogenic structural proteins, which mimic the organizations of the native virion but lack the viral genetic material. These include chimeric viral peptides,

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17

Koenig, Renate, and D. E. Lesemann. "Plant Viruses in German Rivers and Lakes." Journal of Phytopathology 112, no. 2 (February 1985): 105–16. http://dx.doi.org/10.1111/j.1439-0434.1985.tb04819.x.

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18

Piazzolla, P., A. Buondonno, F. Palmieri, and A. Stradis. "Studies on Plant Viruses-soil Colloids Interactions." Journal of Phytopathology 138, no. 2 (June 1993): 111–17. http://dx.doi.org/10.1111/j.1439-0434.1993.tb01367.x.

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19

Lima, Alison T. M., Roberto R. Sobrinho, Jorge González-Aguilera, Carolina S. Rocha, Sarah J. C. Silva, César A. D. Xavier, Fábio N. Silva, Siobain Duffy, and F. Murilo Zerbini. "Synonymous site variation due to recombination explains higher genetic variability in begomovirus populations infecting non-cultivated hosts." Journal of General Virology 94, no. 2 (February 1, 2013): 418–31. http://dx.doi.org/10.1099/vir.0.047241-0.

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Begomoviruses are ssDNA plant viruses that cause serious epidemics in economically important crops worldwide. Non-cultivated plants also harbour many begomoviruses, and it is believed that these hosts may act as reservoirs and as mixing vessels where recombination may occur. Begomoviruses are notoriously recombination-prone, and also display nucleotide substitution rates equivalent to those of RNA viruses. In Brazil, several indigenous begomoviruses have been described infecting tomatoes following the introduction of a novel biotype of the whitefly vector in the mid-1990s. More recently, a num

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20

Brunt, Alan A. "Plant Viruses, Unique and Intriguing Pathogens - A Textbook of Plant Virology." Journal of Phytopathology 148, no. 11-12 (December 2000): 637–42. http://dx.doi.org/10.1111/j.1439-0434.2000.00543.x.

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21

Kleczkowski, A. "EFFECTS OF NONIONIZING RADIATION ON PLANT VIRUSES." Annals of the New York Academy of Sciences 83, no. 4 (December 15, 2006): 661–69. http://dx.doi.org/10.1111/j.1749-6632.1960.tb40937.x.

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22

Maramorosch, Karl. "INTERRELATIONSHIPS BETWEEN PLANT PATHOGENIC VIRUSES AND INSECTS*." Annals of the New York Academy of Sciences 118, no. 6 (December 16, 2006): 363–70. http://dx.doi.org/10.1111/j.1749-6632.1964.tb33984.x.

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23

Gutiérrez, Serafín, Yannis Michalakis, Manuella Munster, and Stéphane Blanc. "Plant feeding by insect vectors can affect life cycle, population genetics and evolution of plant viruses." Functional Ecology 27, no. 3 (February 19, 2013): 610–22. http://dx.doi.org/10.1111/1365-2435.12070.

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24

Vicente, M., G. Fazio, M. E. Menezes, and R. R. Golgher. "Inhibition of Plant Viruses by Human Gamma Interferon." Journal of Phytopathology 119, no. 1 (May 1987): 25–31. http://dx.doi.org/10.1111/j.1439-0434.1987.tb04380.x.

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25

Baruah, Aiswarya, Palaiyur Nanjappan Sivalingam, Urooj Fatima, and Muthappa Senthil-Kumar. "Non-host resistance to plant viruses: What do we know?" Physiological and Molecular Plant Pathology 111 (August 2020): 101506. http://dx.doi.org/10.1016/j.pmpp.2020.101506.

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26

Michael, T., and A. Wilson. "Plant viruses: A tool-box for genetic engineering and crop protection." BioEssays 10, no. 6 (June 1989): 179–86. http://dx.doi.org/10.1002/bies.950100602.

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27

Desbiez, C., B. Moury, and H. Lecoq. "The hallmarks of “green” viruses: Do plant viruses evolve differently from the others?" Infection, Genetics and Evolution 11, no. 5 (July 2011): 812–24. http://dx.doi.org/10.1016/j.meegid.2011.02.020.

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28

Brault, Véronique, Maryline Uzest, Baptiste Monsion, Emmanuel Jacquot, and Stéphane Blanc. "Aphids as transport devices for plant viruses." Comptes Rendus Biologies 333, no. 6-7 (June 2010): 524–38. http://dx.doi.org/10.1016/j.crvi.2010.04.001.

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29

Mitsuhashi, Jun. "AXENIC REARING OF INSECT VECTORS OF PLANT VIRUSES*." Annals of the New York Academy of Sciences 118, no. 6 (December 16, 2006): 384–86. http://dx.doi.org/10.1111/j.1749-6632.1964.tb33987.x.

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30

Nelson, Richard S., and Vitaly Citovsky. "Plant Viruses. Invaders of Cells and Pirates of Cellular Pathways." Plant Physiology 138, no. 4 (August 2005): 1809–14. http://dx.doi.org/10.1104/pp.104.900167.

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31

Poison, A. "19. Purification of Filamentous Plant Viruses by Thin Layer Centrifugation (Applied to TMV, SCMV, PVX, SCV, and YMC Viruses)." Preparative Biochemistry 23, no. 1-2 (January 1993): 237–53. http://dx.doi.org/10.1080/10826069308544553.

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32

Kellmann, Jan-Wolfhard. "Identification of Plant Virus Movement-Host Protein Interactions." Zeitschrift für Naturforschung C 56, no. 9-10 (October 1, 2001): 669–79. http://dx.doi.org/10.1515/znc-2001-9-1001.

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Abstract After the discovery of ‘movement proteins’ as a peculiarity of plant viruses and with the help of novel methods for the detection and isolation of interacting host proteins new insights have been obtained to understand the mechanisms of virus movement in plant tissues. Rapid progress in studying the molecular mechanisms of systemic spread of plant infecting viruses revealed an interrelation between virus movement and macromolecular trafficking in plant tissues. This article summarizes current explorations on plant virus movement proteins (MPs) and introduces the state of the art in th

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33

Pagán, Israel. "Transmission through seeds: The unknown life of plant viruses." PLOS Pathogens 18, no. 8 (August 11, 2022): e1010707. http://dx.doi.org/10.1371/journal.ppat.1010707.

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34

Ruark, Casey L., Michael Gardner, Melissa G. Mitchum, Eric L. Davis, and Tim L. Sit. "Novel RNA viruses within plant parasitic cyst nematodes." PLOS ONE 13, no. 3 (March 6, 2018): e0193881. http://dx.doi.org/10.1371/journal.pone.0193881.

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35

Plumb, R. T. "Viruses of Poaceae : a case history in plant pathology." Plant Pathology 51, no. 6 (December 2002): 673–82. http://dx.doi.org/10.1046/j.1365-3059.2002.00790.x.

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36

Willemsen, Anouk, José L. Carrasco, Santiago F. Elena, and Mark P. Zwart. "Going, going, gone: predicting the fate of genomic insertions in plant RNA viruses." Heredity 121, no. 5 (May 10, 2018): 499–509. http://dx.doi.org/10.1038/s41437-018-0086-x.

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37

Poison, A. "20. Electro-Extraction of Viruses from Infected Plant Tissue (Applied to Turnip Yellow Mosaic, Tobacco Mosaic, and Maize Streak Viruses)." Preparative Biochemistry 23, no. 1-2 (January 1993): 255–65. http://dx.doi.org/10.1080/10826069308544554.

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38

Gilbert, Rosalind, and Diane Ouwerkerk. "The Genetics of Rumen Phage Populations." Proceedings 36, no. 1 (April 7, 2020): 165. http://dx.doi.org/10.3390/proceedings2019036165.

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The microbial populations of the rumen are widely recognised as being essential for ruminant nutrition and health, utilising and breaking down fibrous plant material which would otherwise be indigestible. The dense and highly diverse viral populations which co-exist with these microbial populations are less understood, despite their potential impacts on microbial lysis and gene transfer. In recent years, studies using metagenomics, metatranscriptomics and proteomics have provided new insights into the types of viruses present in the rumen and the proteins they produce. These studies however ar

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39

Singh, Rachana, Mohammad Kuddus, Pradhyumna Kumar Singh, and Deki Choden. "Nanotechnology for Nanophytopathogens: From Detection to the Management of Plant Viruses." BioMed Research International 2022 (October 3, 2022): 1–12. http://dx.doi.org/10.1155/2022/8688584.

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Plant viruses are the most destructive pathogens which cause devastating losses to crops due to their diversity in the genome, rapid evolution, mutation or recombination in the genome, and lack of management options. It is important to develop a reliable remedy to improve the management of plant viral diseases in economically important crops. Some reports show the efficiency of metal nanoparticles and engineered nanomaterials and their wide range of applications in nanoagriculture. Currently, there are reports for the use of nanoparticles as an antibacterial and antifungal agent in plants and

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40

Hong, Hao, Chunli Wang, Ying Huang, Min Xu, Jiaoling Yan, Mingfeng Feng, Jia Li, et al. "Antiviral RISC mainly targets viral mRNA but not genomic RNA of tospovirus." PLOS Pathogens 17, no. 7 (July 28, 2021): e1009757. http://dx.doi.org/10.1371/journal.ppat.1009757.

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Antiviral RNA silencing/interference (RNAi) of negative-strand (-) RNA plant viruses (NSVs) has been studied less than for single-stranded, positive-sense (+)RNA plant viruses. From the latter, genomic and subgenomic mRNA molecules are targeted by RNAi. However, genomic RNA strands from plant NSVs are generally wrapped tightly within viral nucleocapsid (N) protein to form ribonucleoproteins (RNPs), the core unit for viral replication, transcription and movement. In this study, the targeting of the NSV tospoviral genomic RNA and mRNA molecules by antiviral RNA-induced silencing complexes (RISC)

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41

ANDERSON, P. K., and F. J. MORALES. "The Emergence of New Plant Diseases: The Case of Insect-transmitted Plant Viruses." Annals of the New York Academy of Sciences 740, no. 1 Disease in Ev (December 1994): 181–94. http://dx.doi.org/10.1111/j.1749-6632.1994.tb19868.x.

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42

Rosario, Karyna, Noémi Van Bogaert, Natalia B. López-Figueroa, Haris Paliogiannis, Mason Kerr, and Mya Breitbart. "Freshwater macrophytes harbor viruses representing all five major phyla of the RNA viral kingdom Orthornavirae." PeerJ 10 (August 16, 2022): e13875. http://dx.doi.org/10.7717/peerj.13875.

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Research on aquatic plant viruses is lagging behind that of their terrestrial counterparts. To address this knowledge gap, here we identified viruses associated with freshwater macrophytes, a taxonomically diverse group of aquatic phototrophs that are visible with the naked eye. We surveyed pooled macrophyte samples collected at four spring sites in Florida, USA through next generation sequencing of RNA extracted from purified viral particles. Sequencing efforts resulted in the detection of 156 freshwater macrophyte associated (FMA) viral contigs, 37 of which approximate complete genomes or se

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43

Asiimwe, Theodore, Lucy R. Stewart, Kristen Willie, Deogracious P. Massawe, Jovia Kamatenesi, and Margaret G. Redinbaugh. "Maize lethal necrosis viruses and other maize viruses in Rwanda." Plant Pathology 69, no. 3 (February 3, 2020): 585–97. http://dx.doi.org/10.1111/ppa.13134.

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44

Rochow, W. F. "VARIATION WITHIN AND AMONG APHID VECTORS OF PLANT VIRUSES*." Annals of the New York Academy of Sciences 105, no. 13 (December 15, 2006): 713–29. http://dx.doi.org/10.1111/j.1749-6632.1963.tb42959.x.

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45

BEACHY, ROGER N., JOHN H. FITCHEN, and MICH B. HEIN. "Use of Plant Viruses for Delivery of Vaccine Epitopes." Annals of the New York Academy of Sciences 792, no. 1 Engineering P (May 1996): 43–49. http://dx.doi.org/10.1111/j.1749-6632.1996.tb32489.x.

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46

Cody, Will B., and Herman B. Scholthof. "Plant Virus Vectors 3.0: Transitioning into Synthetic Genomics." Annual Review of Phytopathology 57, no. 1 (August 25, 2019): 211–30. http://dx.doi.org/10.1146/annurev-phyto-082718-100301.

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Plant viruses were first implemented as heterologous gene expression vectors more than three decades ago. Since then, the methodology for their use has varied, but we propose it was the merging of technologies with virology tools, which occurred in three defined steps discussed here, that has driven viral vector applications to date. The first was the advent of molecular biology and reverse genetics, which enabled the cloning and manipulation of viral genomes to express genes of interest (vectors 1.0). The second stems from the discovery of RNA silencing and the development of high-throughput

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47

Tatineni, Satyanarayana, Lucy R. Stewart, Hélène Sanfaçon, Xiaofeng Wang, Jesús Navas-Castillo, and M. Reza Hajimorad. "Fundamental Aspects of Plant Viruses−An Overview on Focus Issue Articles." Phytopathology® 110, no. 1 (January 2020): 6–9. http://dx.doi.org/10.1094/phyto-10-19-0404-fi.

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Given the importance of and rapid research progress in plant virology in recent years, this Focus Issue broadly emphasizes advances in fundamental aspects of virus infection cycles and epidemiology. This Focus Issue comprises three review articles and 18 research articles. The research articles cover broad research areas on the identification of novel viruses, the development of detection methods, reverse genetics systems and functional genomics for plant viruses, vector and seed transmission studies, viral population studies, virus–virus interactions and their effect on vector transmission, a

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48

Clavel, Marion, Esther Lechner, Marco Incarbone, Timothée Vincent, Valerie Cognat, Ekaterina Smirnova, Maxime Lecorbeiller, Véronique Brault, Véronique Ziegler-Graff, and Pascal Genschik. "Atypical molecular features of RNA silencing against the phloem-restricted polerovirus TuYV." Nucleic Acids Research 49, no. 19 (October 6, 2021): 11274–93. http://dx.doi.org/10.1093/nar/gkab802.

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Abstract In plants and some animal lineages, RNA silencing is an efficient and adaptable defense mechanism against viruses. To counter it, viruses encode suppressor proteins that interfere with RNA silencing. Phloem-restricted viruses are spreading at an alarming rate and cause substantial reduction of crop yield, but how they interact with their hosts at the molecular level is still insufficiently understood. Here, we investigate the antiviral response against phloem-restricted turnip yellows virus (TuYV) in the model plant Arabidopsis thaliana. Using a combination of genetics, deep sequencin

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49

Clavel, Marion, Esther Lechner, Marco Incarbone, Timothée Vincent, Valerie Cognat, Ekaterina Smirnova, Maxime Lecorbeiller, Véronique Brault, Véronique Ziegler-Graff, and Pascal Genschik. "Atypical molecular features of RNA silencing against the phloem-restricted polerovirus TuYV." Nucleic Acids Research 49, no. 19 (October 6, 2021): 11274–93. http://dx.doi.org/10.1093/nar/gkab802.

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Abstract In plants and some animal lineages, RNA silencing is an efficient and adaptable defense mechanism against viruses. To counter it, viruses encode suppressor proteins that interfere with RNA silencing. Phloem-restricted viruses are spreading at an alarming rate and cause substantial reduction of crop yield, but how they interact with their hosts at the molecular level is still insufficiently understood. Here, we investigate the antiviral response against phloem-restricted turnip yellows virus (TuYV) in the model plant Arabidopsis thaliana. Using a combination of genetics, deep sequencin

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50

Yue, Jianying, Yao Wei, and Mingmin Zhao. "The Reversible Methylation of m6A Is Involved in Plant Virus Infection." Biology 11, no. 2 (February 9, 2022): 271. http://dx.doi.org/10.3390/biology11020271.

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In recent years, m6A RNA methylation has attracted broad interest and is becoming a hot research topic. It has been demonstrated that there is a strong association between m6A and viral infection in the human system. The life cycles of plant RNA viruses are often coordinated with the mechanisms of their RNA modification. Here, we reviewed recent advances in m6A methylation in plant viruses. It appears that m6A methylation plays a dual role during viral infection in plants. On the one hand, m6A methylation acts as an antiviral immune response induced by virus infection, which inhibits viral rep

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