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1

Zhang, Y. Miles, Michael W. Gates, and Joseph D. Shorthouse. "Testing species limits of Eurytomidae (Hymenoptera) associated with galls induced by Diplolepis (Hymenoptera: Cynipidae) in Canada using an integrative approach." Canadian Entomologist 146, no. 3 (November 21, 2013): 321–34. http://dx.doi.org/10.4039/tce.2013.70.

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AbstractStudies of insect host-parasitoid relationships are often confounded by the difficulties associated with species delimitation in taxonomically challenging groups. Eurytomidae (Hymenoptera) are common parasitoids associated with galls induced by Cynipidae (Hymenoptera) and are difficult to identify due to their small size, morphological conservatism, and unreliable published host records. This study tests the species limits of eurytomids associated with galls induced by Diplolepis Geoffroy (Hymenoptera: Cynipidae) in Canada using an integrative taxonomy approach including adult morpholo
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Grant, Colin. "Homage to Henry Bugbee." Call to Earth 3, no. 1 (2002): 21–24. http://dx.doi.org/10.5840/call2002313.

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Conway, Daniel W. "The Wilderness of Henry Bugbee." Journal of Speculative Philosophy 17, no. 4 (2003): 259–69. http://dx.doi.org/10.1353/jsp.2003.0051.

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Hatley, James. "Henry Bugbee, Wilderness, and the Omnirelevance of the Ten-Thousand Things." Journal of Chinese Philosophy 43, no. 3-4 (March 3, 2016): 295–312. http://dx.doi.org/10.1163/15406253-0430304011.

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In his philosophical journal The Inward Morning, Henry Bugbee appeals to the Daodejing to derive principles, particularly that of ziran, of “self-soing,” by which one is guided in thinking heedfully. In this way, one is called reflexively into responsibility for and by things in what Bugbee terms their “density” and “omnirelevance.” Through Bugbee’s unique notion of wilderness as “emergent togetherness,” the periodicity and fluency cultivated in ecological contemplation refines the practice of natural history, such that it is attuned to the manner in which one is called to be at home and so ec
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Allard. "Bugbee on the Ground of Unconditional Affirmation." Pluralist 6, no. 2 (2011): 35. http://dx.doi.org/10.5406/pluralist.6.2.0035.

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Maizlin, Ilan Igor, Jerry S. Chen, Nicholas James Smith, and David A. Rogers. "Closure of a Traumatic Esophagomediastinal Fistula in a Child by Endoscopic Fulguration and Fibrin Injection." American Surgeon 82, no. 9 (September 2016): 789–91. http://dx.doi.org/10.1177/000313481608200938.

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Posttraumatic esophagomediastinal fistula is an uncommon clinical entity that warrants surgical awareness due to its life-threatening potential. Its management, especially in previously operated field, is controversial and several endoscopic methods are being proposed as alternatives. Ours is the first report of endoscopic fulguration and fibrin injection in successful closure of such fistula. A 9-year-old female sustained complete tracheoesophageal transection from a gunshot wound to the neck and underwent immediate primary repair. She presented nine months later with fevers and swelling over
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7

Mooney, Edward F. "Two Testimonies in American Philosophy: Stanley Cavell, Henry Bugbee." Journal of Speculative Philosophy 17, no. 2 (2003): 108–21. http://dx.doi.org/10.1353/jsp.2003.0036.

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MacEwen, Jamie M., Nathan G. Earley, and Robert G. Lalonde. "How much does the host matter to the parasitoid? Distribution of Eurytoma (Hymenoptera, Chalcidoidea) species amongst two locally co-occurring gall-inducing hosts in the genus Diplolepis (Hymenoptera, Cynipidae)." Canadian Entomologist 152, no. 6 (September 28, 2020): 815–22. http://dx.doi.org/10.4039/tce.2020.55.

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AbstractGall wasps in the cynipid genus Diplolepis Geoffroy (Hymenoptera: Cynipidae) attack various species of native and introduced roses in Canada. Although gall forms are diverse, gall wasps are parasitised by highly concordant complexes of parasitoids and inquilines. Many species of gall wasps attack the same host plants and develop over the same periods in the season, suggesting that opportunistic parasitoids may be exploiting a range of hosts rather than specialising. We sampled larvae of Eurytoma Illiger (Hymenoptera: Cynipidae) from galls of D. variabilis (Bassett) and D. rosaefolii (C
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Wu, Haoming, Yang Wang, Lei Dong, Haiyan Hu, Lu Meng, Huimin Liu, Nan Zheng, and Jiaqi Wang. "Microbial Characteristics and Safety of Dairy Manure ComPosting for Reuse as Dairy Bedding." Biology 10, no. 1 (December 28, 2020): 13. http://dx.doi.org/10.3390/biology10010013.

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Changes in bacterial community, phenotype, metabolic function, and pathogenic bacteria content in recycled manure solids (RMS) were analyzed by 16S rRNA sequencing, Bugbase, picrost2, and qPCR, respectively. The data from RMS bedding were compared to those of sand bedding and rice husk bedding. The results show that the proportion of potentially pathogenic bacteria among the manure flora of RMS after dry and wet separation, after composting, and after sun-cure storage was 74.00%, 26.03%, and 49.067%, respectively. Compared to RMS bedding, the proportion of potentially pathogenic microorganisms
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Kuo, Jimmy, Daniel Liu, and Chorng-Horng Lin. "Functional Prediction of Microbial Communities in Sediment Microbial Fuel Cells." Bioengineering 10, no. 2 (February 3, 2023): 199. http://dx.doi.org/10.3390/bioengineering10020199.

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Sediment microbial fuel cells (MFCs) were developed in which the complex substrates present in the sediment could be oxidized by microbes for electron production. In this study, the functional prediction of microbial communities of anode-associated soils in sediment MFCs was investigated based on 16S rRNA genes. Four computational approaches, including BugBase, Functional Annotation of Prokaryotic Taxa (FAPROTAX), the Phylogenetic Investigation of Communities by Reconstruction of Unobserved States (PICRUSt2), and Tax4Fun2, were applied. A total of 67, 9, 37, and 38 functional features were sta
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Andrews, Thomas M., Charles M. Myer, and Robin T. Cotton. "Alternative Management for Laryngeal and Tracheobronchial Lesions: The Bugbee Electrode." Otolaryngology–Head and Neck Surgery 103, no. 5 (November 1990): 841. http://dx.doi.org/10.1177/019459989010300532.

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Richardson, Matthew A., Tyler W. Winford, Byron K. Norris, and J. Mark Reed. "Management of Pediatric Subglottic Cysts Using the Bugbee Fulgurating Electrode." JAMA Otolaryngology–Head & Neck Surgery 140, no. 2 (February 1, 2014): 164. http://dx.doi.org/10.1001/jamaoto.2013.6122.

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Hatley, James. "Henry Bugbee, Wilderness, and the Omnirelevance of the Ten-Thousand Things." Journal of Chinese Philosophy 43, no. 3-4 (September 2016): 295–312. http://dx.doi.org/10.1111/1540-6253.12258.

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Rodick. "Finding One’s Own Voice: The Philosophical Development of Henry G. Bugbee, Jr." Pluralist 6, no. 2 (2011): 18. http://dx.doi.org/10.5406/pluralist.6.2.0018.

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Klassen, Norm. "God's Patients: Chaucer, Agency, and the Nature of Laws by John Bugbee." Religion & Literature 52, no. 2 (2020): 144–46. http://dx.doi.org/10.1353/rel.2020.0011.

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Lynch, Kathryn L. "God's Patients: Chaucer, Agency, and the Nature of Laws by John Bugbee." Studies in the Age of Chaucer 41, no. 1 (2019): 345–49. http://dx.doi.org/10.1353/sac.2019.0015.

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Smith, Laura. "Henry Bugbee, edited by David W. Rodick, Wilderness in America: Philosophical Writings." Environmental Values 27, no. 6 (December 1, 2018): 711–12. http://dx.doi.org/10.3197/096327118x15343388356400.

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Tyler, Ron. "Making a Hand: The Art of H. D. Bugbee by Michael R. Grauer." Southwestern Historical Quarterly 124, no. 1 (2020): 86–87. http://dx.doi.org/10.1353/swh.2020.0061.

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Xue, Yiming, Li Li, Shuanglin Dong, Qinfeng Gao, and Xiangli Tian. "The Effects of Different Carbon Sources on the Production Environment and Breeding Parameters of Litopenaeus vannamei." Water 13, no. 24 (December 14, 2021): 3584. http://dx.doi.org/10.3390/w13243584.

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This study investigated the effect of different carbon sources on water quality, ammonia removal pathways, the bacterial community, and the production of Litopenaeus vannamei in outdoor culture tanks. Three systems were established: a clear water system (CW) and biofloc technology (BFT) systems with added molasses (M-BF) or poly (3-hydroxybutyric acid-co-3-hydrovaleric acid) (PHBV) (P-BF). The average pH, total alkalinity, total organic carbon, biofloc volume, chlorophyll a, nitrite, nitrate, total nitrogen, and nitrification rate were significantly different among the treatments. Microbial co
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20

Li, Junwei, Suwen Chen, Peng Wu, Changbo Zhu, Ruiping Hu, Ting Li, and Yongjian Guo. "Insights into the Relationship between Intestinal Microbiota of the Aquaculture Worm Sipunculus nudus and Surrounding Sediments." Fishes 8, no. 1 (January 3, 2023): 32. http://dx.doi.org/10.3390/fishes8010032.

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Sipunculus nudus is an important intertidal aquaculture species that can ingest organic matter from the surface sediment and shows a high transportation capacity in sediment. However, little is known about the influence of intertidal aquaculture species on the sediment microbial community and the exchange of microbiota between the intestine and the surrounding sediment. In this study, the microbial communities in the intestine of S. nudus and three kinds of surrounding sediments were analyzed using high-throughput sequencing of the 16S rRNA gene amplicon, and the relationships between differen
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McCravy, Kenneth W., and C. Wayne Berisford. "Parasifoids of the Nantucket Pine Tip Moth (Lepidoptera: Tortricidae) in the Coastal Plain of Georgia." Journal of Entomological Science 35, no. 3 (July 1, 2000): 220–26. http://dx.doi.org/10.18474/0749-8004-35.3.220.

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Parasitism of the Nantucket pine tip moth, Rhyacionia frustrana (Comstock), was studied for four consecutive generations in the Georgia coastal plain by collecting tip moth-infested shoots and rearing adult moths and parasitoids. Nineteen species of parasitoids were collected. Based on numbers of emerging adults, the overall tip moth parasitism rate was 44.8%. Lixophaga mediocris Aid rich, Eurytoma pini Bugbee, and Hyssopus rhyacioniae Gahan were the most abundant parasitoids, accounting for 36.3%, 25.4%, and 11.7% of parasitism, respectively. Parasitism was highest in the summer, 1996, and sp
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22

Hanak, Brian W., Emily F. Ross, Carolyn A. Harris, Samuel R. Browd, and William Shain. "Toward a better understanding of the cellular basis for cerebrospinal fluid shunt obstruction: report on the construction of a bank of explanted hydrocephalus devices." Journal of Neurosurgery: Pediatrics 18, no. 2 (August 2016): 213–23. http://dx.doi.org/10.3171/2016.2.peds15531.

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OBJECTIVE Shunt obstruction by cells and/or tissue is the most common cause of shunt failure. Ventricular catheter obstruction alone accounts for more than 50% of shunt failures in pediatric patients. The authors sought to systematically collect explanted ventricular catheters from the Seattle Children's Hospital with a focus on elucidating the cellular mechanisms underlying obstruction. METHODS In the operating room, explanted hardware was placed in 4% paraformaldehyde. Weekly, samples were transferred to buffer solution and stored at 4°C. After consent was obtained for their use, catheters w
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23

Huang, Rui, Ke He, Xiaopeng Duan, Jinfeng Xiao, Hanning Wang, and Guoan Xiang. "Changes of Intestinal Microflora in Colorectal Cancer Patients after Surgical Resection and Chemotherapy." Computational and Mathematical Methods in Medicine 2022 (February 24, 2022): 1–16. http://dx.doi.org/10.1155/2022/1940846.

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Objective. The change of bacterial flora structure in colorectal cancer (CRC) patients after treatment is not clear. The aim of this study was to explore the change and function of intestinal microflora in CRC before and after treatment. Method. The 16S conserved region V3+V4 of intestinal flora obtained from CRC patients was sequenced and analyzed. Alpha and beta diversity indices were used to analyze the abundance and structure of gut flora. FAPROTAX, BugBase, and Tax4Fun software were used to analyze the species phenotypes and Kyoto Encyclopedia of Genes and Genomes Ontology (KO) function p
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24

Frank, Jeff. "Against technology-mediated personalized learning: resources from John William Miller and Henry Bugbee to support parental resistance." Ethics and Education 15, no. 1 (December 4, 2019): 98–112. http://dx.doi.org/10.1080/17449642.2019.1700445.

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Leggo, Jonathan J., and Joseph D. Shorthouse. "Modification of galls of Diplolepis triforma (Hymenoptera: Cynipidae) by the parasitoids Eurytoma spongiosa (Hymenoptera: Eurytomidae) and Glyphomerus stigma (Hymenoptera: Torymidae)." Canadian Entomologist 138, no. 5 (October 2006): 681–96. http://dx.doi.org/10.4039/n05-088.

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AbstractStem galls induced by the cynipid Diplolepis triforma Shorthouse and Ritchie are frequently inhabited by several species of parasitic chalcids and ichneumonids that consume inducers or other parasitoids. Two of these parasitoids, the eurytomid Eurytoma spongiosa Bugbee and the torymid Glyphomerus stigma (Fabr.), consume gall tissues after they have consumed their insect hosts and are considered entomophytophagous. Both are koinobiont ectoparasitoids. Eurytoma spongiosa oviposits within gall chambers and attacks larvae of the inducer throughout the summer season, from the early growth p
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Shah, Darshan H., Arvind P. Ganpule, Ravindra B. Sabnis, and Mahesh R. Desai. "Congenital duplication of the urethra with urethral diverticulum: a case report." F1000Research 3 (May 1, 2014): 99. http://dx.doi.org/10.12688/f1000research.3848.1.

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Duplication of the urethra is a rare congenital anomaly. Urethral duplication with the presence of diverticulum is a rare combination and to the best of our knowledge has not been previously reported. We report a case of a 16 month old male child with duplication of the urethra and diverticulum arising from the ventral urethra. We also cover the intricacies and challenges in the management of such a case.The opening of the narrowed accessory dorsal urethra at the verumontanum was cauterized and gradually the dorsal urethra became atrophied. The ventral urethral diverticulum was excised. This c
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Calisti, A., M. L. Perrotta, R. Coletta, C. Olivieri, V. Briganti, L. Oriolo, and R. Fabbri. "An all-endo Approach to Complete Ureteral Duplications Complicated by Ureterocele and/or Vesicoureteral Reflux: Feasibility, Limitations, and Results." International Journal of Pediatrics 2011 (2011): 1–4. http://dx.doi.org/10.1155/2011/103067.

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Purpose. Totally endoscopic management (all-endo) of patients with a duplicated renal system (DS) associated with severe vesicoureteral reflux (VUR) or obstructive ureterocele (UC) is an attractive alternative to traditional open procedures. The authors discuss feasibility and results of an all-endo approach on a consecutive series of patients.Methods. From 1999 to 2009, all patients with a complete DS associated with UC and/or VUR were proposed for primary all-endo approach. UC puncture was performed using a 3 Fr Bugbee electrode. Deflux (dextranomer/hyaluronic acid copolymer) injection was a
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Cranshaw, Whitney, and Matthew Camper. "Management of Poplar Twiggall Fly on Nursery-grown Aspen." Journal of Environmental Horticulture 25, no. 1 (March 1, 2007): 33–35. http://dx.doi.org/10.24266/0738-2898-25.1.33.

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Abstract The poplar twiggall fly (PTGF), Hexomyza schineri (Giraud) (Diptera: Agromyzidae), makes smoothly rounded galls on current season twigs of aspen that persist and continue to expand into large swellings years after insect emergence. Early season observations noted that adults make feeding puncture wounds in foliage with their ovipositor that are good indicators of early season activity. Oviposition in twigs results in an observable swelling of tissues within days. However, full development of galls does not occur until approximately two months following oviposition. Adults typically we
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Cheney, Ann M., and Danielle Cravalho. "Students Voicing Collegiate Recovery." Journal of Recovery Science 1, no. 2 (September 22, 2018): 4. http://dx.doi.org/10.31886/jors.12.2018.16.

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Young adults increasingly enter college with substance use addiction. Some may achieve recovery before setting their foot on a college campus whereas others during their college years. These students often struggle to maintain sobriety as they act out their daily lives because they find themselves in abstinence-hostile environments (Bugbee et al., 2016; Harris et al., 2008). This presentation will discuss students’ collegiate recovery experiences and will report on a photovoice project documenting students’ recovery experience and recovery management and support needs. Photovoice is a particip
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Srinivasa, Ravi N., Rajiv N. Srinivasa, Joseph J. Gemmete, and Jeffrey Forris Beecham Chick. "Bugbee flexible electrocautery facilitates choledochoscopic biopsy, fulguration, and debulking of a high grade intraductal papillary neoplasm of the bile duct." Hepatobiliary & Pancreatic Diseases International 17, no. 2 (April 2018): 176–79. http://dx.doi.org/10.1016/j.hbpd.2018.02.007.

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Taylor, Jamie. "God’s Patients: Chaucer, Agency, and the Nature of Laws. John Bugbee. Notre Dame, IN: University of Notre Dame Press, 2019. Pp. viii+477." Modern Philology 117, no. 4 (May 1, 2020): E231—E233. http://dx.doi.org/10.1086/708307.

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Ali, Sohaib, Tauseef Ullah, Muhammad Ibrahim Afridi, Tabraiz Wali Shah, Shafiq Ur Rehman, Hanif Ur Rahman, Idris Khan, Muhammad Taimur Khan, and Ehsan Sayyed. "Surgical Outcomes of Third Ventriculostomy in Patients of Obstructive Hydrocephalus." Pakistan Journal of Medical and Health Sciences 16, no. 9 (September 30, 2022): 391–93. http://dx.doi.org/10.53350/pjmhs22169391.

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Introduction: Hydrocephalus is the accumulation of excess cerebrospinal fluid (CSF) in the ventricular system of the brain. Objectives: The main objective of this study is to find the surgical outcomes of third ventriculostomy in patients of obstructive hydrocephalus. Material and methods: The data was collected through non-probability consecutive sampling technique. There were 60 patients which were included in the study. A flexible endoscopic telecamera and a Bugbee electrocautery wire and monitor were used for the procedure. The main causes of hydrocephalus have been identified. history of
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Attfield, Robin. "Review of David W. Rodick (ed.), Wilderness in America: Philosophical Writings of Henry G. Bugbee, New York: Fordham University Press, 2017; ISBN: 978-0-8232-7536-6." Philosophy 94, no. 3 (June 13, 2019): 477–83. http://dx.doi.org/10.1017/s0031819119000068.

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Shahid, Shah Md Ahsan, Nawshad Ali, Sayed Sirajul Islam, Shantona Rani Pal, and Khondokar Seheli Nasrin Lina. "Management of Posterior Urethral Valves: An Outcome Analysis of Endoscopic Valve Fulguration." TAJ: Journal of Teachers Association 31, no. 2 (May 29, 2019): 68–72. http://dx.doi.org/10.3329/taj.v31i2.41603.

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Posterior urethral valves (PUV) constitute the most common infra-vesical urinary obstruction in boys. PUV are often accompanied by severe consequences to the lower and upper urinary tract (LUT, UUT). They also represent a major urological cause for pediatric renal transplantations. Surgical options for primary management invariably aim at abolition of valves. However, temporary urinary diversion may sometimes be a viable alternative, especially in critically ill patients or preterm infants. It was a retrospective, descriptive study which was conducted at the Department of Pediatric Surgery, Ra
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Schrock, Chad D. "John Bugbee, God’s Patients: Chaucer, Agency, and the Nature of Laws. Notre Dame: University of Notre Dame Press, 2019. Pp. xxii, 477. $55. ISBN: 978-0-2681-0445-0." Speculum 96, no. 3 (July 1, 2021): 786–88. http://dx.doi.org/10.1086/715092.

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Deshmukh, V., S. Grogan, T. Seo, D. Bhat, W. Bugbee, D. D’lima, and Y. Yazici. "AB0070 LORECIVIVINT (SM04690), A POTENTIAL DISEASE-MODIFYING TREATMENT FOR KNEE OSTEOARTHRITIS, DEMONSTRATED CARTILAGE-PROTECTIVE EFFECTS ON HUMAN OSTEOARTHRITIC EXPLANTS." Annals of the Rheumatic Diseases 79, Suppl 1 (June 2020): 1335.1–1336. http://dx.doi.org/10.1136/annrheumdis-2020-eular.6346.

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Background:Wnt pathway upregulation contributes to knee osteoarthritis (OA) through osteocyte differentiation, cartilage thinning, and inflammation. Lorecivivint (LOR; SM04690), a novel, small-molecule CLK/DYRK1A inhibitor that modulates the Wnt pathway, demonstrated disease-modifying potential for knee OA in preclinical studies.1However, the specific mechanisms by which LOR protects cartilage in knee OA are unclear.Objectives:To evaluate the cartilage-protective effects of LOR on human OA explants from total knee replacement (TKR) donors.Methods:Knee joint tissue from 22 TKR donors was obtain
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Mazikowski, Adam, and Mateusz Feldzensztajn. "Design and development of lamp of adjustable spectrum." Photonics Letters of Poland 14, no. 1 (March 31, 2022): 13. http://dx.doi.org/10.4302/plp.v14i1.1135.

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Nowadays artificial light is used in many areas of human life. Dedicated lighting allows to emphasize selected features of technical and biological objects, stimulates the growth of plants or enhances the attractiveness of products or artistic works. In this paper a developed low-cost lamp with an adjustable spectrum was presented. As light sources, several LEDs of both narrow-band and wide-band spectrum were selected. A multi-channel Raspberry PI was applied for LEDs driving and ensuring the user’s interface. To properly mix light from several different LEDs, a dedicated integration sphere wa
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Dong, Wanyu, Guicai Du, Tingting Zhang, Hong Yang, Qunqun Guo, and Ronggui Li. "Bacterial Diversity and Pathogenicity of Pine Wood Nematode (Bursaphelenchus xylophilus) from Two Diff erent Sources." Chiang Mai Journal of Science 49, no. 2 (March 2022). http://dx.doi.org/10.12982/cmjs.2022.024.

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Pine wilt disease is a devastating disease of pine trees caused by a pine wood nematode (PWN), Bursaphelenchus xylophilus (Steiner & Buhrer) Nickle. We studied the bacteria carried by B. xylophilus from Fushan Mountain and Qingdao University Campus (F and Q samples) and the pathogenicity of the two PWN samples to explore the relationship between PWN companion bacteria and its pathogenicity. Based on metagenomic analysis, the distribution of the bacteria from the two samples was signifi cantly different. At the phylum level, Proteobacteria is the largest phylum in the two samples, 85 and 65
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Zhu, Anchao, Yingying Liu, Zongmin Li, Ying He, Lijing Bai, Youtian Wu, Yuying Zhang, Ying Huang, and Ping Jiang. "Diagnosis and functional prediction of microbial markers in tumor tissues of sporadic colorectal cancer patients associated with the MLH1 protein phenotype." Frontiers in Oncology 12 (January 23, 2023). http://dx.doi.org/10.3389/fonc.2022.1116780.

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ObjectiveMost patients with sporadic colorectal cancer (SCRC) develop microsatellite instability because of defects in mismatch repair (MMR). Moreover, the gut microbiome plays a vital role in the pathogenesis of SCRC. In this study, we assessed the microbial composition and diversity of SCRC tumors with varying MutL protein homolog 1 (MLH1) status, and the effects of functional genes related to bacterial markers and clinical diagnostic prediction.MethodsThe tumor microbial diversity and composition were profiled using high-throughput sequencing of the 16S ribosomal RNA (rRNA) gene V4 region.
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Yan, Meng, Li Hou, Yaoyao Cai, Hanfei Wang, Yujun Ma, Qiming Geng, Weiwei Jiang, and Weibing Tang. "Effects of Intestinal FXR-Related Molecules on Intestinal Mucosal Barriers in Biliary Tract Obstruction." Frontiers in Pharmacology 13 (June 13, 2022). http://dx.doi.org/10.3389/fphar.2022.906452.

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Background: The farnesoid X receptor (FXR) is a key factor regulating hepatic bile acid synthesis and enterohepatic circulation. Repression of bile acid synthesis by the FXR is a potential strategy for treating cholestatic liver disease. However, the role of intestinal FXR on the intestinal barrier and intestinal microbiota needs further investigation.Materials: Intestinal tissues were collected from patients with biliary atresia or without hepatobiliary disease. Then, intestinal mRNA levels of FXR-related molecules were determined. To investigate the effect of FXR activation, bile-duct-ligati
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Zhao, Xinxin, Fanshu Xiang, Fengxian Tang, Wenchao Cai, Zhuang Guo, Qiangchuan Hou, Xinquan Yang, Wen Song, and Chunhui Shan. "Bacterial Communities and Prediction of Microbial Metabolic Pathway in Rice Wine Koji From Different Regions in China." Frontiers in Microbiology 12 (January 3, 2022). http://dx.doi.org/10.3389/fmicb.2021.748779.

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Rice wine koji, a traditional homemade starter culture in China, is nutritious and delicious. The final quality of rice wine koji is closely related to the structure of its microbial community. However, the diversity of natural microorganisms in rice wine koji from different regions has not been evaluated. In this study, the microbial population of 92 naturally fermented rice koji samples collected from Hubei, Guangxi, and Sichuan was systematically analyzed by high-throughput sequencing. From all the rice wine koji samples, 22 phyla and 479 bacterial genera were identified. Weissella, Pedioco
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Ma, Li-Tian, Jing-Xuan Lian, Yang Bai, Meng-Juan Shang, Zhe-Zhe Zhang, Fei-Fei Wu, Jing Chen, et al. "Adeno-associated virus vector intraperitoneal injection induces colonic mucosa and submucosa transduction and alters the diversity and composition of the faecal microbiota in rats." Frontiers in Cellular and Infection Microbiology 12 (December 22, 2022). http://dx.doi.org/10.3389/fcimb.2022.1028380.

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BackgroundViral vector technology, especially recombinant adeno-associated virus vector (rAAV) technology, has shown great promise in preclinical research for clinical applications. Several studies have confirmed that rAAV can successfully transduce the enteric nervous system (ENS), and rAAV gene therapy has been approved by the Food and Drug Administration (FDA) for the treatment of the early childhood blindness disease Leber congenital amaurosis and spinal muscular atrophy (SMA). However, until now, it has not been possible to determine the effect of AAV9 on intestinal microbiota. MethodsWe
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Zhu, Qiliang, Kun Yan, Yufeng Dong, and Yanping Wang. "Rhizosphere bacterial communities and soil nutrient conditions reveal sexual dimorphism of Populus deltoides." Journal of Forestry Research, July 22, 2022. http://dx.doi.org/10.1007/s11676-022-01517-x.

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AbstractSexual dimorphism of plants shapes the different morphology and physiology between males and females. However, it is still unclear whether it influences belowground ecological processes. In this study, rhizosphere soil of male and female Populus deltoides and bulk soil were collected from an 18-year plantation (male and female trees mix-planted) and grouped into three soil compartments. Soil carbon (C), nitrogen (N) and phosphorus (P) levels were determined, and soil bacterial communities were analyzed by high-throughput sequencing. The results showed the less total carbon and total or
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Armstrong, Jacob, Justine K. Rudkin, Naomi Allen, Derrick W. Crook, Daniel J. Wilson, David H. Wyllie, and Anne Marie O’Connell. "Dynamic linkage of COVID-19 test results between Public Health England’s Second Generation Surveillance System and UK Biobank." Microbial Genomics 6, no. 7 (July 1, 2020). http://dx.doi.org/10.1099/mgen.0.000397.

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UK Biobank (UKB) is an international health resource enabling research into the genetic and lifestyle determinants of common diseases of middle and older age. It comprises 500 000 participants. Public Health England’s Second Generation Surveillance System is a centralized microbiology database covering English clinical diagnostics laboratories that provides national surveillance of legally notifiable infections, bacterial isolations and antimicrobial resistance. We previously developed secure, pseudonymized, individual-level linkage of these systems. In this study, we implemented rapid dynamic
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Liu, Ying, Feifei Fang, Yilin Xiong, Jiandi Wu, Xueyan Li, Gangping Li, Tao Bai, Xiaohua Hou, and Jun Song. "Reprogrammed fecal and mucosa-associated intestinal microbiota and weakened mucus layer in intestinal goblet cell- specific Piezo1-deficient mice." Frontiers in Cellular and Infection Microbiology 12 (November 8, 2022). http://dx.doi.org/10.3389/fcimb.2022.1035386.

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Dysfunction of the mucus layer allows commensal and pathogenic microorganisms to reach the intestinal epithelium, thereby leading to infection and inflammation. This barrier is synthesized and secreted by host goblet cells. Many factors that influence the function of goblet cells (GCs) have been studied. However, how the microenvironment surrounding GCs influences the mucus layer and microbiota of the colon is unclear. To explore the effect of GC Piezo1 on the mucus layer and microbiota in the colon, we generated an intestinal epithelial Piezo1 conditional knockout mouse model. The fecal-assoc
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Lin, Baiqiang, Fuya Zhao, Yang Liu, Jiayu Sun, Jing Feng, Lei Zhao, Haoran Wang, et al. "Alterations in Oral Microbiota of Differentiated Thyroid Carcinoma Patients With Xerostomia After Radioiodine Therapy." Frontiers in Endocrinology 13 (August 26, 2022). http://dx.doi.org/10.3389/fendo.2022.895970.

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Background and AimsOral xerostomia remains one of the most common complications of differentiated thyroid carcinoma patients (DTC) after radioiodine therapy (RAI). Environmental factors in the etiology of xerostomia are largely unknown. We aimed to characterize the oral microbiota signatures and related biological functions associated with xerostomia and identify environmental factors affecting them.MethodsSaliva was collected from 30 DTC patients with xerostomia (XAs), 32 patients without xerostomia (indicated as non-XAs) following RAI after total thyroidectomy, and 40 healthy people (HCs) fo
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Ma, Nan, Yujing Qi, Xiaona Liang, Jing Bai, Jingmin Deng, Meihua Li, and Zhiyi He. "Compare the Effect of Inhaled Corticosteroids and Systemic Corticosteroids on Sputum Microbiome of AECOPD." Frontiers in Medicine 8 (February 26, 2021). http://dx.doi.org/10.3389/fmed.2021.637246.

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Background: To observe the effects of inhaled corticosteroids (ICS) and systemic corticosteroids (SCS) on the sputum microbiology of patients with AECOPD.Methods: The 16S rRNA sequencing results for sputum samples from 36 admitted AECOPD patients were analyzed using ICS or SCS on the basis of standard treatment; sputum samples were collected before and after treatment for 1 day, 7, and 14 days.Results: After 7 days of SCS treatment, the bacterial abundance of Sorangium, Acidibacter, and Fretibacterium decreased at the genus level. After 14 days of SCS treatment, the bacterial abundance of Prev
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Xu, Hengyong, Yuxiang Lu, Dan Li, Chaoyang Yan, Yuru Jiang, Zhi Hu, Zhipeng Zhang, et al. "Probiotic mediated intestinal microbiota and improved performance, egg quality and ovarian immune function of laying hens at different laying stage." Frontiers in Microbiology 14 (January 24, 2023). http://dx.doi.org/10.3389/fmicb.2023.1041072.

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In order to investigate the effects of dietary probiotics supplementation on laying performance, egg quality, serum hormone levels, immunity, antioxidant, and gut microbiota of layers at different laying stages, a total of 168 Tianfu green shell laying hens (28-day-old) were randomly divided into 2 treatments: a non-supplemented control diet (NC), and diet supplemented with 10 g/kg of probiotics, respectively. Each treatment had 6 replicates with 14 hens per replicate. The feeding trial lasted for 54 weeks. The results showed that the supplementation of probiotics significantly increased the a
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Liang, Z., C. B. Dong, H. Liang, Y. X. Zhen, R. L. Zhou, Y. F. Han, and Z. Q. Liang. "A microbiome study reveals the potential relationship between the bacterial diversity of a gymnastics hall and human health." Scientific Reports 12, no. 1 (April 5, 2022). http://dx.doi.org/10.1038/s41598-022-09355-x.

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AbstractCurrently, investigations on the microbiota of sports centers and related facilities have been carried out in some countries, which showed that Microsporum gypseum, Trichophyton mentagrophytes and T. tonsurans are important dermatoprotofungi. In China, some research on athletes and sports equipment between the fungal community and public health has made some interesting achievements. However, the bacterial group among them has not been reported. Therefore, The aim of this study was to uncover (I) gymnastic equipment is there potential pathogenic factors and (ii) is there any difference
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Cao, Yurong, Baozhen Zhu, Fei Li, Duihong Zhang, Tongqing Guo, Fadi Li, and Guo Yang. "The Destruction of the Anaerobic Environment Caused by Rumen Fistula Surgery Leads to Differences in the Rumen Microbial Diversity and Function of Sheep." Frontiers in Veterinary Science 8 (December 1, 2021). http://dx.doi.org/10.3389/fvets.2021.754195.

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This experiment was to study the impact of rumen fistula surgery on the rumen microbios in sheep. Six male adult Hu sheep (48.8 ± 0.23 kg, 0.5 years) were fed at 0700 and 1,800 with ad libitum access to water. The rumen fistula was installed in the same batch from 0600 to 0900. Monitoring the dry mater intake and the output of dry mater faces 1, 2, 4, 6, 8, 10, 12, 14 days after fistulated surgery. The collection of rumen fluid was arranged at 1d during rumen surgery (DRS1), 3d after rumen surgery (ARS3), and 14d after rumen surgery (ARS14) for volatile fatty acid (VFA) and DNA extraction for
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