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Artykuły w czasopismach na temat „Folding code”

Autor: Grafiati

Data publikacji: 3 czerwca 2025

Data aktualizacji: 31 lipca 2025

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1

Caramelo, Julio J., and Armando J. Parodi. "A sweet code for glycoprotein folding." FEBS Letters 589, no. 22 (2015): 3379–87. http://dx.doi.org/10.1016/j.febslet.2015.07.021.

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Breuckmann, Nikolas P., and Simon Burton. "Fold-Transversal Clifford Gates for Quantum Codes." Quantum 8 (June 13, 2024): 1372. http://dx.doi.org/10.22331/q-2024-06-13-1372.

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We generalize the concept of folding from surface codes to CSS codes by considering certain dualities within them. In particular, this gives a general method to implement logical operations in suitable LDPC quantum codes using transversal gates and qubit permutations only.To demonstrate our approach, we specifically consider a [[30, 8, 3]] hyperbolic quantum code called Bring's code. Further, we show that by restricting the logical subspace of Bring's code to four qubits, we can obtain the full Clifford group on that subspace.

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3

Radford, Sheena. "How Well Evolved Is The Folding Code?" Biophysical Journal 96, no. 3 (2009): 552a. http://dx.doi.org/10.1016/j.bpj.2008.12.2992.

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Rumbley, J., L. Hoang, L. Mayne, and S. W. Englander. "An amino acid code for protein folding." Proceedings of the National Academy of Sciences 98, no. 1 (2001): 105–12. http://dx.doi.org/10.1073/pnas.98.1.105.

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5

Carter, Charlie. "tRNA: The operational RNA code and protein folding." Open Access Government 41, no. 1 (2024): 228–29. http://dx.doi.org/10.56367/oag-041-10822.

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tRNA: The operational RNA code and protein folding Charles W. Carter, Jr., from the Department of Biochemistry and Biophysics, University of North Carolina at Chapel Hill, relates molecular recognition used in genetic coding to structures of aminoacyl-tRNA synthetases and their cognate tRNAs. Genetic coding is simultaneously widely understood and little appreciated. Widely understood because Marshall Nierenberg worked out the codon assignments within a decade or so of the double helical structure of DNA by Watson and Crick (1). Little appreciated because a code, as far as we know, is something

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6

Suk, Jae Hyuk, and Dong Hoon Lee. "VCF: Virtual Code Folding to Enhance Virtualization Obfuscation." IEEE Access 8 (2020): 139161–75. http://dx.doi.org/10.1109/access.2020.3012684.

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7

Rackovsky, S. "On the nature of the protein folding code." Proceedings of the National Academy of Sciences 90, no. 2 (1993): 644–48. http://dx.doi.org/10.1073/pnas.90.2.644.

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8

Zou, Taisong, Brian Woodrum, Giovanna Ghirlanda, and Banu Sefika Ozkan. "Deciphering the Protein Folding Code through Zipping Steps." Biophysical Journal 104, no. 2 (2013): 398a. http://dx.doi.org/10.1016/j.bpj.2012.11.2220.

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9

Janković, G. Brankica, and Đ. Natalija Polović. "The protein folding problem." Biologia Serbica 39, no. 1 (2017): 105–11. https://doi.org/10.5281/zenodo.827151.

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<strong>Summary.</strong> The protein folding problem is the most important unsolved problem in structural biochemistry. The problem consists of three related puzzles: i) what is the physical folding code? ii) what is the folding mechanism? and iii) can we predict the 3D structure from the amino acid sequences of proteins? Bearing in mind the importance of protein folding, misfolding, aggregation and assembly in many different disciplines, from biophysics to biomedicine, finding solutions that would be generally applicable is of the utmost importance in biosciences.

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10

Prakash, Kirti, and David Fournier. "Histone Code and Higher-Order Chromatin Folding: A Hypothesis." Genomics and Computational Biology 3, no. 2 (2017): 41. http://dx.doi.org/10.18547/gcb.2017.vol3.iss2.e41.

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Histone modifications alone or in combination are thought to modulate chromatin structure and function; a concept termed histone code. By combining evidence from several studies, we investigated if the histone code can play a role in higher-order folding of chromatin. Firstly using genomic data, we analyzed associations between histone modifications at the nucleosome level. We could dissect the composition of individual nucleosomes into five predicted clusters of histone modifications. Secondly, by assembling the raw reads of histone modifications at various length scales, we noticed that the

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11

FENG, Wenquan, Xiaodi XING, Qi ZHAO, and ZuLin WANG. "Local Frequency Folding Method for Fast PN-Code Acquisition." IEICE Transactions on Communications E97.B, no. 5 (2014): 1072–79. http://dx.doi.org/10.1587/transcom.e97.b.1072.

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12

Biro, Jan. "Discovery of Proteomic Code with mRNA Assisted Protein Folding." International Journal of Molecular Sciences 9, no. 12 (2008): 2424–46. http://dx.doi.org/10.3390/ijms9122424.

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13

Hu, Shaoliang, Mingrong Wang, Guoping Cai, and Mingyue He. "Genetic Code-guided Protein Synthesis and Folding inEscherichia coli." Journal of Biological Chemistry 288, no. 43 (2013): 30855–61. http://dx.doi.org/10.1074/jbc.m113.467977.

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14

Komar, Anton A. "A Code Within a Code: How Codons Fine-Tune Protein Folding in the Cell." Biochemistry (Moscow) 86, no. 8 (2021): 976–91. http://dx.doi.org/10.1134/s0006297921080083.

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15

Goychuk, Andriy, Deepti Kannan, Arup K. Chakraborty, and Mehran Kardar. "Source Code - Polymer folding through active processes recreates features of genome organization." Proceedings of the National Academy of Sciences of the United States of America 120, no. 20 (2023): e2221726120. https://doi.org/10.5281/zenodo.7274942.

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This repository contains the source code for the polymer simulations, the source code for exact numerical calculations that determine the steady state conformation of a linear phantom polymer, and several Mathematica notebook that illustrates analytic calculations, for the article "<em>Polymer folding through active processes recreates features of genome organization</em>" published in <em>Proceedings of the National Academy of Sciences of the United States of America </em><strong>120</strong>, e2221726120. File Description Active-Polymer-Conformation.zip Mathematica notebo

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16

Mravic, Marco, Jessica L. Thomaston, Maxwell Tucker, Paige E. Solomon, Lijun Liu, and William F. DeGrado. "Packing of apolar side chains enables accurate design of highly stable membrane proteins." Science 363, no. 6434 (2019): 1418–23. http://dx.doi.org/10.1126/science.aav7541.

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The features that stabilize the structures of membrane proteins remain poorly understood. Polar interactions contribute modestly, and the hydrophobic effect contributes little to the energetics of apolar side-chain packing in membranes. Disruption of steric packing can destabilize the native folds of membrane proteins, but is packing alone sufficient to drive folding in lipids? If so, then membrane proteins stabilized by this feature should be readily designed and structurally characterized—yet this has not been achieved. Through simulation of the natural protein phospholamban and redesign of

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17

Bielecki, Włodzimierz, Piotr Błaszyński, and Marek Pałkowski. "3D Tiled Code Generation for Nussinov’s Algorithm." Applied Sciences 12, no. 12 (2022): 5898. http://dx.doi.org/10.3390/app12125898.

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Current state-of-the-art parallel codes used to calculate the maximum number of pairs for a given RNA sequence by means of Nussinov’s algorithm do not allow for achieving speedup close up to the number of the processors used for execution of those codes on multi-core computers. This is due to the fact that known codes do not make full use of and derive benefit from cache memory of such computers. There is a need to develop new approaches allowing for increasing cache exploitation in multi-core computers. One of such possibilities is increasing the dimension of tiles in generated target tiled c

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18

Dodson, Guy. "Protein folding: deciphering the second half of the genetic code." Trends in Biochemical Sciences 16 (January 1991): 76–77. http://dx.doi.org/10.1016/0968-0004(91)90030-y.

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19

Yang, Jiaan. "Comprehensive description of protein structures using protein folding shape code." Proteins: Structure, Function, and Bioinformatics 71, no. 3 (2008): 1497–518. http://dx.doi.org/10.1002/prot.21932.

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20

Thinh, Tran Ich, Bui Van Binh, and Tran Minh Tu. "Bending and vibration analysis of multi-folding laminate composite plate using finite element method." Vietnam Journal of Mechanics 34, no. 3 (2012): 185–202. http://dx.doi.org/10.15625/0866-7136/34/3/2359.

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This paper deals with the bending and vibration analysis of multi-folding laminate composite plate using finite element method based on the first order shear deformation theory (FSDT). The algorithm and Matlab code using eight nodded rectangular isoparametric plate element with five degrees of freedom per node were built for numerical simulations. In the numerical results, the effect of folding angle on deflections, natural frequencies and transient displacement response for different boundary conditions of the plate were investigated.

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21

Oliveberg, Mikael, and Peter G. Wolynes. "The experimental survey of protein-folding energy landscapes." Quarterly Reviews of Biophysics 38, no. 3 (2005): 245–88. http://dx.doi.org/10.1017/s0033583506004185.

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1. Introduction 22. The macroscopic and microscopic views of protein folding 22.1 The macroscopic view: the experimental folding free-energy profile 22.2 The microscopic view: an underlying energy landscape 33. The micro to macro projection: from an energy landscape to a free-energy profile 64. Global features of the protein folding transition-state ensemble 124.1 Overall transition state location β[Dagger]: a measure of compactness 124.2 What makes folding so robust ? 135. Structural characterization of the transition-state ensemble 165.1 Insights from ϕ-value analysis 166. Deviations from id

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22

Gao, Yu Han, Ru Zhang Li, Dong Bing Fu, Yong Lu Wang, and Zheng Ping Zhang. "An Encoder Used in an Ultra High-Speed Folding and Interpolating ADC." Advanced Materials Research 1049-1050 (October 2014): 687–90. http://dx.doi.org/10.4028/www.scientific.net/amr.1049-1050.687.

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High speed encoder is the key element of high speed analog-to-digital converter (ADC). Therefor the type of encoder, the type of code, bubble error suppression and bit synchronization must be taken into careful consideration especially for folding and interpolating ADC. To reduce the bubble error which may resulted from the circuit niose, comparator metastability and other interference, the output of quantizer is first encoded with gray code and then converted to binary code. This high speed encoder is verified in the whole time-interleaved ADC with 0.18 Bi-CMOS technology, the whole ADC can a

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23

Yoo, Seungsoo. "A Folding-Based Direct P Code Acquisition Scheme in GPS Receivers." Journal of Institute of Control, Robotics and Systems 24, no. 9 (2018): 910–14. http://dx.doi.org/10.5302/j.icros.2018.18.0105.

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24

Shental-Bechor, Dalit, and Yaakov Levy. "Folding of glycoproteins: toward understanding the biophysics of the glycosylation code." Current Opinion in Structural Biology 19, no. 5 (2009): 524–33. http://dx.doi.org/10.1016/j.sbi.2009.07.002.

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25

Li, Hong, Xiaowei Cui, Mingquan Lu, and Zhenming Feng. "Dual-folding based rapid search method for long PN-code acquisition." IEEE Transactions on Wireless Communications 7, no. 12 (2008): 5286–96. http://dx.doi.org/10.1109/t-wc.2008.071130.

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26

Blalock, J. Edwin. "The role of the genetic code in peptide folding and interaction." Pharmacological Research 26 (September 1992): 112. http://dx.doi.org/10.1016/1043-6618(92)90934-4.

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27

Balasco, Nicole, Luciana Esposito, and Luigi Vitagliano. "Structural Biology in the AlphaFold Era: How Far Is Artificial Intelligence from Deciphering the Protein Folding Code?" Biomolecules 15, no. 5 (2025): 674. https://doi.org/10.3390/biom15050674.

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Proteins are biomolecules characterized by uncommon chemical and physicochemical complexities coupled with extreme responsiveness to even minor chemical modifications or environmental variations. Since the shape that proteins assume is fundamental for their function, understanding the chemical and structural bases that drive their three-dimensional structures represents the central problem for an atomic-level interpretation of biology. Not surprisingly, this question has progressively become the Holy Grail of structural biology (the folding problem). From this perspective, we initially describ

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28

Islam, Md Saiful, Ying Hei Chui, and Zengtao Chen. "Novel Apex Connection for Light Wood Frame Panelized Roof." Materials 15, no. 21 (2022): 7457. http://dx.doi.org/10.3390/ma15217457.

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Panelized fabrication of light-frame wood buildings has higher productivity than the traditional stick-built method. However, the roof production process is not very efficient due to the structural system and construction method. This study proposes a novel apex connection that allows for a folding mechanism in a panelized light wood frame roof system. Proof of concept of the proposed connection assembly is presented by a 3D printout of the developed connection. Following the steel design code and timber code, the initial estimation of different parameters, such as the pinhole diameter and num

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29

Santos, João D., Sara Canato, Ana S. Carvalho, et al. "Folding Status Is Determinant over Traffic-Competence in Defining CFTR Interactors in the Endoplasmic Reticulum." Cells 8, no. 4 (2019): 353. http://dx.doi.org/10.3390/cells8040353.

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The most common cystic fibrosis-causing mutation (F508del, present in ~85% of CF patients) leads to CFTR misfolding, which is recognized by the endoplasmic reticulum (ER) quality control (ERQC), resulting in ER retention and early degradation. It is known that CFTR exit from the ER is mediated by specific retention/sorting signals that include four arginine-framed tripeptide (AFT) retention motifs and a diacidic (DAD) exit code that controls the interaction with the COPII machinery. Here, we aim at obtaining a global view of the protein interactors that regulate CFTR exit from the ER. We used

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DIMITRIEVA, SLAVICA, and PHILIPP BUCHER. "PRACTICALITY AND TIME COMPLEXITY OF A SPARSIFIED RNA FOLDING ALGORITHM." Journal of Bioinformatics and Computational Biology 10, no. 02 (2012): 1241007. http://dx.doi.org/10.1142/s0219720012410077.

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Commonly used RNA folding programs compute the minimum free energy structure of a sequence under the pseudoknot exclusion constraint. They are based on Zuker's algorithm which runs in time O(n3). Recently, it has been claimed that RNA folding can be achieved in average time O(n2) using a sparsification technique. A proof of quadratic time complexity was based on the assumption that computational RNA folding obeys the "polymer-zeta property". Several variants of sparse RNA folding algorithms were later developed. Here, we present our own version, which is readily applicable to existing RNA fold

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31

Rackovsky, S. "On the existence and implications of an inverse folding code in proteins." Proceedings of the National Academy of Sciences 92, no. 15 (1995): 6861–63. http://dx.doi.org/10.1073/pnas.92.15.6861.

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KENNEDY, MICHAEL PETER. "A NONLINEAR DYNAMICS INTERPRETATION OF ALGORITHMIC A/D CONVERSION." International Journal of Bifurcation and Chaos 05, no. 03 (1995): 891–93. http://dx.doi.org/10.1142/s0218127495000685.

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An algorithmic A/D converter may be viewed as a discrete-time dynamical system. From this perspective, an ideal one bit recycling binary converter corresponds to the Bernouilli Shift map. An implementation of the tent map (by means of a folding circuit or otherwise) yields an algorithmic converter with Gray code output.

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33

Xie, Wei, Kazue Kanehara, Ayaz Sayeed, and Davis T. W. Ng. "Intrinsic Conformational Determinants Signal Protein Misfolding to the Hrd1/Htm1 Endoplasmic Reticulum–associated Degradation System." Molecular Biology of the Cell 20, no. 14 (2009): 3317–29. http://dx.doi.org/10.1091/mbc.e09-03-0231.

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Endoplasmic reticulum (ER) quality control mechanisms monitor the folding of nascent polypeptides of the secretory pathway. These are dynamic processes that retain folding proteins, promote the transport of conformationally mature proteins, and target misfolded proteins to ER-associated degradation (ERAD) pathways. Aided by the identification of numerous ERAD factors, late functions that include substrate extraction, ubiquitination, and degradation are fairly well described. By contrast, the mechanisms of substrate recognition remain mysterious. For some substrates, a specific N-linked glycan

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34

Carter, Charles W., and Peter R. Wills. "The Roots of Genetic Coding in Aminoacyl-tRNA Synthetase Duality." Annual Review of Biochemistry 90, no. 1 (2021): 349–73. http://dx.doi.org/10.1146/annurev-biochem-071620-021218.

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Codon-dependent translation underlies genetics and phylogenetic inferences, but its origins pose two challenges. Prevailing narratives cannot account for the fact that aminoacyl-tRNA synthetases (aaRSs), which translate the genetic code, must collectively enforce the rules used to assemble themselves. Nor can they explain how specific assignments arose from rudimentary differentiation between ancestral aaRSs and corresponding transfer RNAs (tRNAs). Experimental deconstruction of the two aaRS superfamilies created new experimental tools with which to analyze the emergence of the code. Amino aci

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35

Blaszynski, Piotr, Marek Palkowski, Wlodzimierz Bielecki, and Maciej Poliwoda. "Efficiency of Various Tiling Strategies for the Zuker Algorithm Optimization." Mathematics 12, no. 5 (2024): 728. http://dx.doi.org/10.3390/math12050728.

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This paper focuses on optimizing the Zuker RNA folding algorithm, a bioinformatics task with non-serial polyadic dynamic programming and non-uniform loop dependencies. The intricate dependence pattern is represented using affine formulas, enabling the automatic application of tiling strategies via the polyhedral method. Three source-to-source compilers—PLUTO, TRACO, and DAPT—are employed, utilizing techniques such as affine transformations, the transitive closure of dependence relation graphs, and space–time tiling to generate cache-efficient codes, respectively. A dedicated transpose code tec

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36

McGehee, Andrew J., Sutanu Bhattacharya, Rahmatullah Roche, and Debswapna Bhattacharya. "PolyFold: An interactive visual simulator for distance-based protein folding." PLOS ONE 15, no. 12 (2020): e0243331. http://dx.doi.org/10.1371/journal.pone.0243331.

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Recent advances in distance-based protein folding have led to a paradigm shift in protein structure prediction. Through sufficiently precise estimation of the inter-residue distance matrix for a protein sequence, it is now feasible to predict the correct folds for new proteins much more accurately than ever before. Despite the exciting progress, a dedicated visualization system that can dynamically capture the distance-based folding process is still lacking. Most molecular visualizers typically provide only a static view of a folded protein conformation, but do not capture the folding process.

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Yoo, Seungsoo, and Sun Yong Kim. "A Two Stage P Code Acquisition Scheme Based on Folding and Zero Padding." Journal of Institute of Control, Robotics and Systems 24, no. 8 (2018): 710–15. http://dx.doi.org/10.5302/j.icros.2018.0075.

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Sun, Shaojian, Paul D. Thomas, and Ken A. Dill. "A simple protein folding algorithm using a binary code and secondary structure constraints." "Protein Engineering, Design and Selection" 8, no. 8 (1995): 769–78. http://dx.doi.org/10.1093/protein/8.8.769.

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Gontchar, I. I., and M. V. Chushnyakova. "A C-code for the double folding interaction potential of two spherical nuclei." Computer Physics Communications 181, no. 1 (2010): 168–82. http://dx.doi.org/10.1016/j.cpc.2009.09.007.

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40

Bowler, Bruce E., Md Khurshid, Alam Khan, and Michaela L. Finnegan. "Probing the Protein Folding Code through the Polymer Properties of Low-Complexity Sequences." Biophysical Journal 104, no. 2 (2013): 235a. http://dx.doi.org/10.1016/j.bpj.2012.11.1327.

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Beck, Sophie, Alexander Hampel, Olivier Parcollet, Claude Ederer, and Antoine Georges. "Charge self-consistent electronic structure calculations with dynamical mean-field theory using Quantum ESPRESSO, Wannier 90 and TRIQS." Journal of Physics: Condensed Matter 34, no. 23 (2022): 235601. http://dx.doi.org/10.1088/1361-648x/ac5d1c.

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Abstract We present a fully charge self-consistent implementation of dynamical mean field theory (DMFT) combined with density functional theory (DFT) for electronic structure calculations of materials with strong electronic correlations. The implementation uses the Quantum ESPRESSO package for the DFT calculations, the Wannier90 code for the up-/down-folding and the TRIQS software package for setting up and solving the DMFT equations. All components are available under open source licenses, are MPI-parallelized, fully integrated in the respective packages, and use an hdf5 archive interface to

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42

Takizawa, Hiroki, Junichi Iwakiri, Goro Terai, and Kiyoshi Asai. "Finding the direct optimal RNA barrier energy and improving pathways with an arbitrary energy model." Bioinformatics 36, Supplement_1 (2020): i227—i235. http://dx.doi.org/10.1093/bioinformatics/btaa469.

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Abstract Motivation RNA folding kinetics plays an important role in the biological functions of RNA molecules. An important goal in the investigation of the kinetic behavior of RNAs is to find the folding pathway with the lowest energy barrier. For this purpose, most of the existing methods use heuristics because the number of possible pathways is huge even if only the shortest (direct) folding pathways are considered. Results In this study, we propose a new method using a best-first search strategy to efficiently compute the exact solution of the minimum barrier energy of direct pathways. Usi

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Aslan, N., and M. Saltan. "On the Construction of Chaotic Dynamical Systems on the Box Fractal." Researches in Mathematics 29, no. 2 (2021): 3. http://dx.doi.org/10.15421/242105.

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In this paper, our main aim is to obtain two different discrete chaotic dynamical systems on the Box fractal ($B$). For this goal, we first give two composition functions (which generate Box fractal and filled-square respectively via escape time algorithm) of expanding, folding and translation mappings. In order to examine the properties of these dynamical systems more easily, we use the intrinsic metric which is defined by the code representation of the points on $B$ and express these dynamical systems on the code sets of this fractal. We then obtain that they are chaotic in the sense of Deva

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44

APPEL, ANDREW W., and TREVOR JIM. "Shrinking lambda expressions in linear time." Journal of Functional Programming 7, no. 5 (1997): 515–40. http://dx.doi.org/10.1017/s0956796897002839.

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Functional-language compilers often perform optimizations based on beta and delta reduction. To avoid speculative optimizations that can blow up the code size, we might wish to use only shrinking reduction rules guaranteed to make the program smaller: these include dead-variable elimination, constant folding, and a restricted beta rule that inlines only functions that are called just once. The restricted beta rule leads to a shrinking rewrite system that has not previously been studied. We show some efficient normalization algorithms that are immediately useful in optimizing compilers; and we

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Solomovici, Jean, Thierry Lesnik, Simone Parvez, Ricardo Ehrlich, Claude Reiss, and Hasan Parvez. "Conformational diseases and the protein folding problem: Evidence for species-independent link between protein folding and genetic code degeneracy in ribosomal proteins." Biogenic Amines 18, no. 3 (2004): 477–501. http://dx.doi.org/10.1163/1569391041501753.

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White, S. H., and G. von Heijne. "Do protein–lipid interactions determine the recognition of transmembrane helices at the ER translocon?" Biochemical Society Transactions 33, no. 5 (2005): 1012–15. http://dx.doi.org/10.1042/bst0331012.

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Membrane-protein integration, folding and assembly processes in vivo depend on complex targeting, translocation, chaperoning, and sorting machineries that somehow read the ‘molecular code’ built into the nascent polypeptide, ultimately producing a properly folded protein integrated into the correct target membrane. Although the main molecular constituents and the basic mechanistic principles of many of these machines are known in outline, the codes remain poorly defined and there is little quantitative information on how protein sequence affects the final structure of membrane proteins. By car

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Minja, Aleksandar, Dušan Dobromirov, and Vojin Šenk. "Bidirectional stack decoding of polar codes." Vojnotehnicki glasnik 69, no. 2 (2021): 405–15. http://dx.doi.org/10.5937/vojtehg69-29858.

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Introduction/purpose: The paper introduces a reduced latency stack decoding algorithm of polar codes, inspired by the bidirectional stack decoding of convolutional codes and based on the folding technique. Methods: The stack decoding algorithm (also known as stack search) that is useful for decoding tree codes, the list decoding technique introduced by Peter Elias and the folding technique for polar codes which is used to reduce the latency of the decoding algorithm. The simulation was done using the Monte Carlo procedure. Results: A new polar code decoding algorithm, suitable for parallel imp

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Liu, Yi, Qian Yang, and Fangzhou Zhao. "Synonymous but Not Silent: The Codon Usage Code for Gene Expression and Protein Folding." Annual Review of Biochemistry 90, no. 1 (2021): 375–401. http://dx.doi.org/10.1146/annurev-biochem-071320-112701.

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Codon usage bias, the preference for certain synonymous codons, is found in all genomes. Although synonymous mutations were previously thought to be silent, a large body of evidence has demonstrated that codon usage can play major roles in determining gene expression levels and protein structures. Codon usage influences translation elongation speed and regulates translation efficiency and accuracy. Adaptation of codon usage to tRNA expression determines the proteome landscape. In addition, codon usage biases result in nonuniform ribosome decoding rates on mRNAs, which in turn influence the cot

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BIRO, JAN C. "Protein Folding Information in Nucleic Acids which Is Not Present in the Genetic Code." Annals of the New York Academy of Sciences 1091, no. 1 (2006): 399–411. http://dx.doi.org/10.1196/annals.1378.083.

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Gontchar, I. I., and M. V. Chushnyakova. "DFMSPH14: A C-code for the double folding interaction potential of two spherical nuclei." Computer Physics Communications 206 (September 2016): 97–102. http://dx.doi.org/10.1016/j.cpc.2016.04.012.

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