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Rozprawy doktorskie na temat „Gene mapping – Computer simulation”

Autor: Grafiati

Data publikacji: 4 czerwca 2021

Data aktualizacji: 19 lutego 2022

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1

Kruczkiewicz, Peter. "A comparative genomic framework for the in silico design and assessment of molecular typing methods using whole-genome sequence data with application to Listeria monocytogenes." Thesis, Lethbridge, Alta. : University of Lethbridge, Dept. of Biological Sciences, c2013, 2013. http://hdl.handle.net/10133/3391.

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Although increased genome sequencing e orts have increased our understanding of genomic variability within many bacterial species, there has been limited application of this knowledge towards assessing current molecular typing methods and developing novel molecular typing methods. This thesis reports a novel in silico comparative genomic framework where the performance of typing methods is assessed on the basis of the discriminatory power of the method as well as the concordance of the method with a whole-genome phylogeny. Using this framework, we designed a comparative genomic ngerprinting (

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Akhtar, Mahmood Electrical Engineering &amp Telecommunications Faculty of Engineering UNSW. "Genomic sequence processing: gene finding in eukaryotes." Publisher:University of New South Wales. Electrical Engineering & Telecommunications, 2008. http://handle.unsw.edu.au/1959.4/40912.

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Of the many existing eukaryotic gene finding software programs, none are able to guarantee accurate identification of genomic protein coding regions and other biological signals central to pathway from DNA to the protein. Eukaryotic gene finding is difficult mainly due to noncontiguous and non-continuous nature of genes. Existing approaches are heavily dependent on the compositional statistics of the sequences they learn from and are not equally suitable for all types of sequences. This thesis firstly develops efficient digital signal processing-based methods for the identification of genomic

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Hon, Wing-hong, and 韓永康. "Analysis of DNA shuffling by computer simulation." Thesis, The University of Hong Kong (Pokfulam, Hong Kong), 2003. http://hub.hku.hk/bib/B27771027.

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Luotsinen, Linus Jan. "AUTONOMOUS ENVIRONMENTAL MAPPING IN MULTI-AGENT UAV SYSTEMS." Master's thesis, University of Central Florida, 2004. http://digital.library.ucf.edu/cdm/ref/collection/ETD/id/4421.

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UAV units are by many researchers and aviation specialists considered the future and cutting edge of modern flight technology. This thesis discusses methods for efficient autonomous environmental mapping in a multi-agent domain. An algorithm that emphasizes on team work by sharing the agents local map information and exploration intentions is presented as a solution to the mapping problem. General theories on how to model and implement rational autonomous behaviour for UAV agents are presented. Three different human and tactical behaviour modeling techniques are evaluated. The author found the

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Ayar, Yusuf Yavuz. "Design And Simulation Of A Flash Translation Layer Algorithm." Master's thesis, METU, 2010. http://etd.lib.metu.edu.tr/upload/12611995/index.pdf.

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Flash Memories have been widely used as a storage media in electronic devices such as USB flash drives, mobile phones and cameras. Flash Memory offers a portable and non-volatile de- sign, which can be carried to everywhere without data loss. It is durable against temperature and humidity. With all these advantages, Flash Memory gets popular day by day. However, Flash Memory has also some disadvantages, such as erase-before restriction and erase limi- tation of each individual block. Erase-before restriction pushes every single writable unit to be erased before an update operation. Another lim

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Hao, Guoliang. "Imaging of the atria and cardiac conduction system : from experiment to computer modelling." Thesis, University of Manchester, 2013. https://www.research.manchester.ac.uk/portal/en/theses/imaging-of-the-atria-and-cardiac-conduction-system--from-experiment-to-computer-modelling(3e5dba52-70f3-4fa8-890d-adfe2380086c).html.

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Background: Experimental mapping and computer modelling provide important platforms to study the fundamental mechanisms underlying normal and abnormal activation of the heart. However, accurate computer modelling requires detailed anatomical models and needs support and validation from experimental data. Aims: 1) Construction of detailed anatomical heart models with the cardiac conduction system (CCS). 2) Mapping of the electrical activation sequence in rabbit atria to support and validate computer simulation. 3) Mapping of the spontaneous activity in the atrioventricular ring tissues (AV ring

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Walter, Matthew R. "Sparse Bayesian information filters for localization and mapping." Thesis, Massachusetts Institute of Technology, 2008. http://hdl.handle.net/1721.1/46498.

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Thesis (S.M.)--Joint Program in Oceanography/Applied Ocean Science and Engineering (Massachusetts Institute of Technology, Dept. of Mechanical Engineering; and the Woods Hole Oceanographic Institution), 2008.<br>Includes bibliographical references (p. 159-170).<br>This thesis formulates an estimation framework for Simultaneous Localization and Mapping (SLAM) that addresses the problem of scalability in large environments. We describe an estimation-theoretic algorithm that achieves significant gains in computational efficiency while maintaining consistent estimates for the vehicle pose and the

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Barran, Brian Arthur. "View dependent fluid dynamics." Texas A&M University, 2006. http://hdl.handle.net/1969.1/3827.

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This thesis presents a method for simulating fluids on a view dependent grid structure to exploit level-of-detail with distance to the viewer. Current computer graphics techniques, such as the Stable Fluid and Particle Level Set methods, are modified to support a nonuniform simulation grid. In addition, infinite fluid boundary conditions are introduced that allow fluid to flow freely into or out of the simulation domain to achieve the effect of large, boundary free bodies of fluid. Finally, a physically based rendering method known as photon mapping is used in conjunction with ray tracing to g

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Cai, Xinye. "A multi-objective GP-PSO hybrid algorithm for gene regulatory network modeling." Diss., Manhattan, Kan. : Kansas State University, 2009. http://hdl.handle.net/2097/1492.

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Agyapong-Kodua, Kwabena. "Multi-product cost and value stream modelling in support of business process analysis." Thesis, Loughborough University, 2009. https://dspace.lboro.ac.uk/2134/5585.

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He, Yiyang. "A Physically Based Pipeline for Real-Time Simulation and Rendering of Realistic Fire and Smoke." Thesis, Stockholms universitet, Numerisk analys och datalogi (NADA), 2018. http://urn.kb.se/resolve?urn=urn:nbn:se:su:diva-160401.

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With the rapidly growing computational power of modern computers, physically based rendering has found its way into real world applications. Real-time simulations and renderings of fire and smoke had become one major research interest in modern video game industry, and will continue being one important research direction in computer graphics. To visually recreate realistic dynamic fire and smoke is a complicated problem. Furthermore, to solve the problem requires knowledge from various areas, ranged from computer graphics and image processing to computational physics and chemistry. Even though

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Diaz, Espinosa Carlos Andrés. "Uma aplicação de navegação robótica autônoma através de visão computacional estéreo." [s.n.], 2010. http://repositorio.unicamp.br/jspui/handle/REPOSIP/263062.

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Orientador: Paulo Roberto Gardel Kurka<br>Dissertação (mestrado) - Universidade Estadual de Campinas, Faculdade de Engenharia Mecânica<br>Made available in DSpace on 2018-08-16T16:41:02Z (GMT). No. of bitstreams: 1 DiazEspinosa_CarlosAndres_M.pdf: 5130242 bytes, checksum: 334f37aa82bbde2c9ddbfe192baa7c48 (MD5) Previous issue date: 2010<br>Resumo: O presente trabalho descreve uma técnica de navegação autônoma, utilizando imagens estereoscópicas de câmeras para estimar o movimento de um robô em um ambiente desconhecido. Um método de correlação de pontos em imagens unidimensionais é desenvolvid

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Refahi, Yassin. "Modélisation multiéchelle de perturbation de la phyllotaxie d'Arabidopsis thaliana." Phd thesis, Université Montpellier II - Sciences et Techniques du Languedoc, 2011. http://tel.archives-ouvertes.fr/tel-00859869.

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Dans cette thèse nous nous intéressons à la manière dont la structure des plantes émerge du fonctionnement de leur méristème apical. Pour cela, nous étudions la structure du méristème apical d'Arabidopsis thaliana à différentes échelles. La thèse commence par étudier les plantes à l'échelle macroscopique dont la phyllotaxie a été perturbée et par le développement d'outils mathématiques pour quantifier et analyser ces perturbations. Ensuite, nous étudions à une échelle plus microscopiques quelles peuvent être les raisons de telles perturbations. Pour cela, nous avons testé une version étendue d

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Costa, MÃrio Jorge Nunes. "RealizaÃÃo de PrÃtica de FÃsica em Bancada e SimulaÃÃo Computacional para Promover o Desenvolvimento da Aprendizagem Significativa e Colaborativa." Universidade Federal do CearÃ, 2013. http://www.teses.ufc.br/tde_busca/arquivo.php?codArquivo=9445.

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nÃo hÃ<br>A avaliaÃÃo educacional brasileira, segundo o PISA, se reflete no quadro de desigualdades econÃmicas e sociais vivenciadas entre os hemisfÃrios norte e sul planetÃrios. A presente pesquisa objetiva investigar, de que maneira, a concepÃÃo e realizaÃÃo de uma atividade pedagÃgica colaborativa de experimentaÃÃo de bancada, apoiada por atividades pedagÃgicas de simulaÃÃo e modelagem computacional, pÃde contribuir para favorecer o desenvolvimento do processo de aprendizagem significativa. As atividades foram efetivadas enfatizando-se a construÃÃo e (re) significaÃÃo de conceitos de fÃsica

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15

Fischer, Stephan. "Modélisation de l'évolution de la taille des génomes et de leur densité en gènes par mutations locales et grands réarrangements chromosomiques." Phd thesis, INSA de Lyon, 2013. http://tel.archives-ouvertes.fr/tel-00924831.

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Bien que de nombreuses séquences génomiques soient maintenant connues, les mécanismes évolutifs qui déterminent la taille des génomes, et notamment leur part d'ADN non codant, sont encore débattus. Ainsi, alors que de nombreux mécanismes faisant grandir les génomes (prolifération d'éléments transposables, création de nouveaux gènes par duplication, ...) sont clairement identifiés, les mécanismes limitant la taille des génomes sont moins bien établis. La sélection darwinienne pourrait directement défavoriser les génomes les moins compacts, sous l'hypothèse qu'une grande quantité d'ADN à répliqu

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Li, Xuejing. "Using machine learning to predict gene expression and discover sequence motifs." Thesis, 2012. https://doi.org/10.7916/D81N874M.

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Recently, large amounts of experimental data for complex biological systems have become available. We use tools and algorithms from machine learning to build data-driven predictive models. We first present a novel algorithm to discover gene sequence motifs associated with temporal expression patterns of genes. Our algorithm, which is based on partial least squares (PLS) regression, is able to directly model the flow of information, from gene sequence to gene expression, to learn cis regulatory motifs and characterize associated gene expression patterns. Our algorithm outperforms traditional c

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Anderssen, Edwin Cheere. "'n Rekenaargebaseerde model vir die voorstelling van tyd-ruimtelike aspekte met verwysing na historiese veldslae." Thesis, 2014. http://hdl.handle.net/10210/10562.

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Ph.D.<br>Until recently the majority of computer aided instruction (CAl) programs available for the teaching of history, only provided elementary facilities such as drill-and-practice exercises. Some of the more advanced systems use simulation techniques to create fictitious historical situations. These simulation systems take the form of computer games where the participants have to make decisions on historical situations with which they are confronted. The initial aim of this study was to develop a CAl-system for the teaching of history in which historical field battles could be simulated, o

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Malakar, Preeti. "Integrated Parallel Simulations and Visualization for Large-Scale Weather Applications." Thesis, 2013. http://etd.iisc.ernet.in/2005/3907.

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The emergence of the exascale era necessitates development of new techniques to efficiently perform high-performance scientific simulations, online data analysis and on-the-fly visualization. Critical applications like cyclone tracking and earthquake modeling require high-fidelity and high- performance simulations involving large-scale computations and generate huge amounts of data. Faster simulations and simultaneous online data analysis and visualization enable scientists provide real-time guidance to policy makers. In this thesis, we present a set of techniques for efficient high-fidelity

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