Добірка наукової літератури з теми "Palindrome analyser"
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Статті в журналах з теми "Palindrome analyser":
Cunningham, Lesley A., Atina G. Coté, Cennet Cam-Ozdemir, and Susanna M. Lewis. "Rapid, Stabilizing Palindrome Rearrangements in Somatic Cells by the Center-Break Mechanism." Molecular and Cellular Biology 23, no. 23 (December 1, 2003): 8740–50. http://dx.doi.org/10.1128/mcb.23.23.8740-8750.2003.
Brázda, Václav, Jan Kolomazník, Jiří Lýsek, Lucia Hároníková, Jan Coufal, and Jiří Št'astný. "Palindrome analyser – A new web-based server for predicting and evaluating inverted repeats in nucleotide sequences." Biochemical and Biophysical Research Communications 478, no. 4 (September 2016): 1739–45. http://dx.doi.org/10.1016/j.bbrc.2016.09.015.
Brázda, Václav, Jiří Lýsek, Martin Bartas, and Miroslav Fojta. "Complex Analyses of Short Inverted Repeats in All Sequenced Chloroplast DNAs." BioMed Research International 2018 (July 24, 2018): 1–10. http://dx.doi.org/10.1155/2018/1097018.
Nobile, C., J. Nickol, and R. G. Martin. "Nucleosome phasing on a DNA fragment from the replication origin of simian virus 40 and rephasing upon cruciform formation of the DNA." Molecular and Cellular Biology 6, no. 8 (August 1986): 2916–22. http://dx.doi.org/10.1128/mcb.6.8.2916.
Nobile, C., J. Nickol, and R. G. Martin. "Nucleosome phasing on a DNA fragment from the replication origin of simian virus 40 and rephasing upon cruciform formation of the DNA." Molecular and Cellular Biology 6, no. 8 (August 1986): 2916–22. http://dx.doi.org/10.1128/mcb.6.8.2916-2922.1986.
Higa, M., T. Kitahashi, Y. Sasaki, H. Okada, and H. Ando. "Distinct promoter sequences of two precursor genes for salmon gonadotropin-releasing hormone in masu salmon." Journal of Molecular Endocrinology 19, no. 2 (October 1, 1997): 149–61. http://dx.doi.org/10.1677/jme.0.0190149.
Ahmad, Sk Safique. "Perturbation analysis for palindromic and anti-palindromic nonlinear eigenvalue problems." ETNA - Electronic Transactions on Numerical Analysis 51 (2019): 151–68. http://dx.doi.org/10.1553/etna_vol51s151.
Anderson, S. J., S. Miyake, and D. Y. Loh. "Transcription from a murine T-cell receptor V beta promoter depends on a conserved decamer motif similar to the cyclic AMP response element." Molecular and Cellular Biology 9, no. 11 (November 1989): 4835–45. http://dx.doi.org/10.1128/mcb.9.11.4835.
Anderson, S. J., S. Miyake, and D. Y. Loh. "Transcription from a murine T-cell receptor V beta promoter depends on a conserved decamer motif similar to the cyclic AMP response element." Molecular and Cellular Biology 9, no. 11 (November 1989): 4835–45. http://dx.doi.org/10.1128/mcb.9.11.4835-4845.1989.
He, Tian-Xiao, and Louis Shapiro. "Palindromes and pseudo-involution multiplication." Linear Algebra and its Applications 593 (May 2020): 1–17. http://dx.doi.org/10.1016/j.laa.2020.01.031.
Дисертації з теми "Palindrome analyser":
Šedý, Michal. "Analýza lokalizace inverzních repetic v bakteriálních genomech." Master's thesis, Vysoké učení technické v Brně. Fakulta chemická, 2021. http://www.nusl.cz/ntk/nusl-449791.
Pirillo, Giuseppe. "Contribution à la combinatoire des mots." Paris 7, 2007. http://www.theses.fr/2007PA077159.
We study: a)a special case of unavoidable reguiarities, the repetitivity introduced and studied by Justin. This field is in relation with the results of Thue, the Theorem of Ramsey and the Theorem of van der Waerden; b) the notion of permutable semigroupe (in relation with the Theorem of Shirshov) and some finiteness conditions forfinitely generated semigroups. C) the Sturmians words (of which the study, very old, has recently progressed under the impulsion of many interesting contributions of Berstel) and the episturmian words. We also mention some our recent contributions to the theoretical biology and some contributions to mathematical and computer science education. This work is not a survey of our research activity and does not contain a detailed analysis of our results but is a moment of reflexion in order to better organize our future work
Sutharzan, Sreeskandarajan. "A GENOME-WIDE ANALYSIS OF PERFECT INVERTED REPEATS IN ARABIDOPSIS THALIANA." Miami University / OhioLINK, 2013. http://rave.ohiolink.edu/etdc/view?acc_num=miami1386848607.
Maurer, Kathleen M. "Ned Rorem’s Poems of Love and the Rain and Paul Hindemith’s Hin und züruck: An Analysis of Two Twentieth-Century Vocal Works With an Emphasis On the Use of Mirror Form." University of Cincinnati / OhioLINK, 2007. http://rave.ohiolink.edu/etdc/view?acc_num=ucin1186589055.
Altay, Dede Neslihan. "Characterization Of Lactobacillus Delbrueckii Subspecies Bulgaricus And Streptococcus Thermophilus As Lactic Cultures Isolated From Traditional Turkish Yogurts And Subtyping Of Streptococcus Thermophilus Using Crispr Analysis And Mlst." Phd thesis, METU, 2010. http://etd.lib.metu.edu.tr/upload/3/12612009/index.pdf.
Jacoby, Derek. "The Music of Lee Hyla| An Analysis of the First Movement of Concerto for Piano and Chamber Orchestra no. 2 and a Survey of Stylistic Elements in His Music, and an original composition, "Palindromic One| Number 31", for seven players." Thesis, Brandeis University, 2013. http://pqdtopen.proquest.com/#viewpdf?dispub=3562303.
The first part of this dissertation is a detailed analysis of the first movement of Lee Hyla’s Concerto for Piano and Chamber Orchestra no. 2 (1991). The second part documents stylistic elements over the course of his compositional output.
The Concerto will serve as the focal point of analysis for two reasons. First, Hyla uses a more surface-level and audible musical narrative, a type of narrative he began employing in his music between 1981 and 1983. The Concerto, coming eight to ten years later, is sufficiently removed from the initial works, allowing this technique time to further develop. By 1991, other important facets of his approach emerged, elements employed in many compositions that followed, including some of his most recent.
The second reason for the selection of the Concerto pertains to the exact type of narrative employed. In Hyla’s compositions, the musical narrative ranges from almost completely flowing, in which most sections seamlessly transition to the next, to almost completely juxtaposed, in which blocks of contrasting music are linked with little or no transition. In the middle, there is a large gray area representing a merger of the two, partially flowing and partially juxtaposed. This is where the Concerto is found.
The second part of this analysis will examine several stylistic elements of Hyla’s larger style. Through numerous examples, drawn from well over a dozen pieces composed from 1978 to present, further light will be shed on some of the consistent compositional techniques found in Hyla’s music.
Deyell, Matthew. "Multiplexed Genetic Perturbations of the Regulatory Network of E. coli." Thesis, Sorbonne Paris Cité, 2018. http://www.theses.fr/2018USPCC175/document.
Despite advances in DNA sequencing, we have yet to understand how an organism’s phenotype relates to the contents of their genome. However it has become clear that the impact of genes are context dependant. The mere presence of a gene within a genome does not inform us of when it is expressed, and which other genes are expressed along with it. Understanding how gene expression is regulated is a necessary piece of understanding how phenotypes emerge from a given genotype. Transcription factors, which can activate or repress the expression of a gene, form a complex network of interactions between themselves and their targeted genes. This network consists of a hierarchy of groups of strongly connected transcription factors, each relating to distinct cellular processes. Is the structure of this transcriptional regulatory network significant to the transcriptional response of a cell? Here we use a programmable DNA binding protein called CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) to perturb gene expression of global regulators within the transcriptional regulatory network. These global regulators are regulating many distinct cellular processes and have many genetic targets. The CRISPR system allows us to perturb these regulators in all possible combinations, including higher order perturbations with potentially all targeted global regulators perturbed at the same time. We then record both the expression pattern of the transciptome using RNA sequencing, and the fitness of each strain. We find that the structure of the regulatory network increases the dimensionality of the transcriptional response rather than reducing it. This results in significant high order epistasis beyond pair-wise interactions. This has implications for how these networks evolve. The pair-wise epistasis we find between global transcription factors rely on the presence or absence of other perturbations. This implies that other perturbations could act as potentiating mutations. The number of potential evolutionary paths increases with high order epistasis, although this alone tells us nothing about the quality of those paths. Importantly, the replicates for this thesis are still on-going and the data presented here has not yet excluded experimental artefacts
Cote, Atina. "In Vivo Analysis of Cruciform Extrusion and Resolution of DNA Palindromes in Eukaryotes." Thesis, 2009. http://hdl.handle.net/1807/17746.
Wei, Chia-chen, and 魏嘉成. "Perturbation Analysis of Structure-Preserving Algorithms for the Palindromic Quadratic Eigenvalue Problems." Thesis, 2009. http://ndltd.ncl.edu.tw/handle/57624243216411979880.
國立成功大學
數學系應用數學碩博士班
97
In this paper, we consider the perturbation analysis corresponding to the palindromic quadratic eigenvalue problem $(lambda^{2}A_{1}^{ op}+lambda A_{0}+A_{1})x=0$, where $A_{0}^{ op}=A_{0}$ and $A_{0},A_{1}inBbb{C}^{n imes n}$. The palindromic structure of the coefficient matrices of the quadratic eigenvalue problem shows the reciprocal characteristic for the eigenvalues. In order to solve the eigenvalue problem efficiently and accurately, preserving the reciprocal property is significant. In $2006$, Mackey et al. [17] proposed a palindromic linearization for the problem and in $2007$, Qian et al. [21] gave another linearization for the problem which transfers the palindromic quadratic eigenvalue problem to an enlarged symplectic generalized eigenvalue problem. Moreover, there are two more typical structure-preserving algorithms for solving the corresponding generalized eigenvalue problems in [23,21] which are called URV-based method and Patel-like algorithm, respectively. Recently, Lin [21] shows an equivalent relation between URV-based method and Patel-like algorithm so that the computation cost for the first type linearization using URV-based method is about a double more than that for the second type linearization using the Patel-like algorithm. Based on the idea of Tisseur [25], we compare the condition number of both generalized eigenvalue problems. We hence conclude that the computed eigenvalues of the second type linearization can be computed more accurate than that of the first type. Finally, numerical implementation illustrates the conclusions above.
Schröder, Christian [Verfasser]. "Palindromic and even eigenvalue problems - analysis and numerical methods / vorgelegt von Christian Schröder." 2008. http://d-nb.info/989328422/34.
Книги з теми "Palindrome analyser":
Symonds, Dominic. “You’ve Got to Be Carefully Taught”. Edited by Robert Gordon. Oxford University Press, 2014. http://dx.doi.org/10.1093/oxfordhb/9780195391374.013.0003.
Частини книг з теми "Palindrome analyser":
Hooda, Amit, Michael M. Bronstein, Alexander M. Bronstein, and Radu P. Horaud. "Shape Palindromes: Analysis of Intrinsic Symmetries in 2D Articulated Shapes." In Lecture Notes in Computer Science, 665–76. Berlin, Heidelberg: Springer Berlin Heidelberg, 2012. http://dx.doi.org/10.1007/978-3-642-24785-9_56.
Ghosh, Debashis, and Anant P. Godbole. "Palindromes in Random Letter Generation: Poisson Approximations, Rates of Growth,and Erdös-Rényi Laws." In Athens Conference on Applied Probability and Time Series Analysis, 99–115. New York, NY: Springer New York, 1996. http://dx.doi.org/10.1007/978-1-4612-0749-8_7.
Neima, Paul E., Joan Burnside, Katrina Elsaesser, Harry Hwang, Bruce E. Clurman, Robert Kimmel, and Jeff Delrow. "Analysis of gene expression, copy number and palindrome formation with a DT40 enriched CDNA microarray." In Subcellular Biochemistry, 245–56. Dordrecht: Springer Netherlands, 2006. http://dx.doi.org/10.1007/978-1-4020-4896-8_14.
Botelho, Ana, Ana Canto, Célia Leão, and Mónica V. Cunha. "Clustered Regularly Interspaced Short Palindromic Repeats (CRISPRs) Analysis of Members of the Mycobacterium tuberculosis Complex." In Veterinary Infection Biology: Molecular Diagnostics and High-Throughput Strategies, 373–89. New York, NY: Springer New York, 2014. http://dx.doi.org/10.1007/978-1-4939-2004-4_27.
Chiang, Cheng-Ta, Yuyun Liao, and Mi Lu. "Performance Analysis of the Palindrome Network." In Advances in Parallel Computing, 673–80. Elsevier, 1998. http://dx.doi.org/10.1016/s0927-5452(98)80086-5.
Burnetts, Charles. "Sentiment and the ‘Smart’ Melodrama." In Improving Passions. Edinburgh University Press, 2017. http://dx.doi.org/10.3366/edinburgh/9780748698196.003.0007.
Zobrist, Jacob D., Morgan McCaw, Minjeong Kang, Alan L. Eggenberger, Keunsub Lee, and Kan Wang. "Genome editing of maize." In Genome editing for precision crop breeding, 341–76. Burleigh Dodds Science Publishing, 2021. http://dx.doi.org/10.19103/as.2020.0082.19.
Тези доповідей конференцій з теми "Palindrome analyser":
Huang, Chien-Hung, Sheng-Jia Weng, Praveen Kumar Korla, Jywe-Fei Fang, Jeffrey J. P. Tsai, Nilubon Kurubanjerdjit, and Ka-Lok Ng. "Identification and Analysis of Palindromes for RNA Sequences." In 2016 IEEE 16th International Conference on Bioinformatics and Bioengineering (BIBE). IEEE, 2016. http://dx.doi.org/10.1109/bibe.2016.35.