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1

Hiraoka, Retori, Tomoyuki Komai, and Shinji Tsuchida. "A new species of Alvinocaris (Crustacea: Decapoda: Caridea: Alvinocarididae) from hydrothermal vents in the Izu-Bonin and Mariana Arcs, north-western Pacific." Journal of the Marine Biological Association of the United Kingdom 100, no. 1 (2019): 93–102. http://dx.doi.org/10.1017/s0025315419001097.

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AbstractA new species of the caridean genus Alvinocaris, A. marimonte sp. nov., is described and illustrated on the basis of specimens collected from hydrothermal vents at three locations in Izu-Bonin and Mariana Arcs of the north-western Pacific Ocean, Myojin Knoll (1224 m depth), NW Eifuku (1574–1582 m depth) and NW Rota seamounts (525 m depth). It is the 17th species assigned to Alvinocaris, and differs from all other congeneric species in several morphological characteristics derived from the rostrum length and armature, the carapace armature, the shape of the posterior margin of the telso
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2

MARTIN, JOEL W., ADAM R. WALL, TIM SHANK, HARIM CHA, CHARLOTTE A. SEID, and GREG W. ROUSE. "A new species of Alvinocaris (Crustacea: Decapoda: Caridea: Alvinocarididae) from Costa Rican methane seeps." Zootaxa 4504, no. 3 (2018): 418. http://dx.doi.org/10.11646/zootaxa.4504.3.7.

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A new caridean shrimp, Alvinocaris costaricensis, is described from methane seeps in the eastern Pacific off Costa Rica. The new species is the 16th described species of the genus, and by molecular analysis appears closest to Alvinocaris komaii from the Lau Basin, southwestern Pacific, but shares certain morphological characters with A. lusca from the Galapagos Rift and A. muricola from the West Florida Escarpment, as well as with A. kexueae from the Manus Basin in the Southwest Pacific.
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3

KOMAI, T., T. M. SHANK, and C. L. VAN DOVER. "A new species of Alvinocaris (Crustacea: Decapoda: Caridea: Alvinocarididae) and a new record of A. muricola from methane seeps on the Blake Ridge Diapir, Northwestern Atlantic." Zootaxa 1019, no. 1 (2005): 27. http://dx.doi.org/10.11646/zootaxa.1019.1.2.

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Two species of the alvinocaridid shrimp genus Alvinocaris, A. methanophila n. sp. and A. muricola Williams, are reported from a cold seep site on the Blake Ridge Diapir, northwestern Atlantic, at a depth of 2155 m. Alvinocaris methanophila is described and illustrated on the basis of 33 adult specimens. It is most similar to the sympatrically found A. muricola Williams, but differs in the comparatively stout second segment of the antennular peduncle and smaller size at maturity in females. Available data suggest that A. muricola is rare at this site. Brief notes on habitat and distribution of
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4

KOMAI, TOMOYUKI, and TIN-YAM CHAN. "A new genus and two new species of alvinocaridid shrimps (Crustacea: Decapoda: Caridea) from a hydrothermal vent field off northeastern Taiwan." Zootaxa 2372, no. 1 (2010): 15–32. http://dx.doi.org/10.11646/zootaxa.2372.1.3.

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Two new species of alvinocaridid shrimps are described from a hydrothermal vent field off northeastern Taiwan at depths of 252–300 m. Alvinocaris chelys n. sp. is morphologically very similar to A. williamsi Shank & Martin, 2003 from the Mid-Atlantic Ridge, and A. alexander Ahyong, 2009 from the southern Kermadec Ridge. These three species can be differentiated by the shape of the postrostral ridge, telson, the second segment of the antennular peduncle and the armature of the meri and ischia of the third pereopod. The second new species, although rather similar to Alvinocaris niwa Webber,
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WEBBER, W. RICHARD. "A new species of Alvinocaris (Crustacea: Decapoda: Alvinocarididae) and new records of alvinocaridids from hydrothermal vents north of New Zealand." Zootaxa 444, no. 1 (2004): 1. http://dx.doi.org/10.11646/zootaxa.444.1.1.

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Alvinocaris niwa n. sp. is described from hydrothermal vents at the Brothers Caldera and Rumble V Seamount on the southern Kermadec Ridge, midway between the Kermadec Islands and Bay of Plenty, New Zealand. Four hundred specimens of Alvinocaris longirostris Kikuchi & Ohta, 1995, described from Japan, are recorded at the Brothers. The presence of a possible third Alvinocaris at Rumble V and one or two species of Chorocaris at Brothers are also reported. Eighty-eight specimens of A. niwa and 41 of A. longirostris were measured and examined to assess morphological variation. Morphological cha
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6

Lunina, A. A., and A. L. Vereshchaka. "Hydrothermal vent shrimps Alvinocaris markensis: Interpopulation variation." Doklady Biological Sciences 421, no. 1 (2008): 266–68. http://dx.doi.org/10.1134/s0012496608040133.

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7

Yahagi, Takuya, Hiromi Watanabe, Shigeaki Kojima, Girish Beedessee, and Tomoyuki Komai. "First record and a new species of Alvinocaris Williams & Chace, 1982 (Crustacea: Decapoda: Caridea: Alvinocarididae) from the Indian Ocean." Zootaxa 3893, no. 1 (2014): 101–13. https://doi.org/10.11646/zootaxa.3893.1.4.

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Yahagi, Takuya, Watanabe, Hiromi, Kojima, Shigeaki, Beedessee, Girish, Komai, Tomoyuki (2014): First record and a new species of Alvinocaris Williams & Chace, 1982 (Crustacea: Decapoda: Caridea: Alvinocarididae) from the Indian Ocean. Zootaxa 3893 (1): 101-113, DOI: 10.11646/zootaxa.3893.1.4
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8

Martin, Joel W., Adam R. Wall, Tim Shank, Harim Cha, Charlotte A. Seid, and Greg W. Rouse. "A new species of Alvinocaris (Crustacea: Decapoda: Caridea: Alvinocarididae) from Costa Rican methane seeps." Zootaxa 4504, no. 3 (2018): 418–30. https://doi.org/10.11646/zootaxa.4504.3.7.

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Martin, Joel W., Wall, Adam R., Shank, Tim, Cha, Harim, Seid, Charlotte A., Rouse, Greg W. (2018): A new species of Alvinocaris (Crustacea: Decapoda: Caridea: Alvinocarididae) from Costa Rican methane seeps. Zootaxa 4504 (3): 418-430, DOI: 10.11646/zootaxa.4504.3.7
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9

WANG, YAN-RONG, and ZHONG-LI SHA. "A new species of the genus Alvinocaris Williams and Chace, 1982 (Crustacea: Decapoda: Caridea: Alvinocarididae) from the Manus Basin hydrothermal vents, Southwest Pacific." Zootaxa 4226, no. 1 (2017): 126. http://dx.doi.org/10.11646/zootaxa.4226.1.7.

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One new species of alvinocaridid Alvinocaris kexueae sp. nov. is described from hydrothermal vents on the Manus Basin, Southwest Pacific. This is the fifteenth species in Alvinocaris Williams & Chace, 1982. The new species is easily recognized by the combination of the rostrum distinctively overreaching the distal end of the antennular peduncle, and the armature of its dorsal and ventral margins; the unarmed third abdominal segment, and by the posterior margin of the telson having one triangular tooth medially and 6 pairs unequal spines. It is morphologically most similar to A. brevitelson
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10

Komai, T., T. M. Shank, and Dover C. L. Van. "A new species of Alvinocaris (Crustacea: Decapoda: Caridea: Alvinocarididae) and a new record of A. muricola from methane seeps on the Blake Ridge Diapir, Northwestern Atlantic." Zootaxa 1019, no. 1 (2005): 27–42. https://doi.org/10.11646/zootaxa.1019.1.2.

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Komai, T., Shank, T. M., Van Dover, C. L. (2005): A new species of Alvinocaris (Crustacea: Decapoda: Caridea: Alvinocarididae) and a new record of A. muricola from methane seeps on the Blake Ridge Diapir, Northwestern Atlantic. Zootaxa 1019 (1): 27-42, DOI: 10.11646/zootaxa.1019.1.2, URL: https://biotaxa.org/Zootaxa/article/view/zootaxa.1019.1.2
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Tokuda, Gaku, Akinori Yamada, Kazuma Nakano, Nao Arita, and Hideo Yamasaki. "Occurrence and recent long-distance dispersal of deep-sea hydrothermal vent shrimps." Biology Letters 2, no. 2 (2005): 257–60. http://dx.doi.org/10.1098/rsbl.2005.0420.

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Deep-sea hydrothermal vents and methane seeps are extreme environments that have a high concentration of hydrogen sulphide. However, abundant unique invertebrates including shrimps of the family Bresiliidae have been found in such environments. The bresiliid shrimps are believed to have radiated in the Miocene (less than 20 Myr); however, the period when and the mechanisms by which they dispersed across the hydrothermal vents and cold seeps in oceans worldwide have not been clarified. In the present study, we collected the deep-sea blind shrimp Alvinocaris longirostris from the hydrothermal ve
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12

Guo, Lu-Lu, Shao-Lu Wang, Fang-Chao Zhu, Feng Xue, and Li-Sheng He. "Characteristics of Two Crustins from Alvinocaris longirostris in Hydrothermal Vents." Marine Drugs 19, no. 11 (2021): 600. http://dx.doi.org/10.3390/md19110600.

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Crustins are widely distributed among different crustacean groups. They are characterized by a whey acidic protein (WAP) domain, and most examined Crustins show activity against Gram-positive bacteria. This study reports two Crustins, Al-crus 3 and Al-crus 7, from hydrothermal vent shrimp, Alvinocaris longirostris. Al-crus 3 and Al-crus 7 belong to Crustin Type IIa, with a similarity of about 51% at amino acid level. Antibacterial assays showed that Al-crus 3 mainly displayed activity against Gram-positive bacteria with MIC50 values of 10–25 μM. However, Al-crus 7 not only displayed activity a
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13

Wharton, Darrison N., Robert N. Jinks, Erik D. Herzog, et al. "Morphology of the Eye of the Hydrothermal Vent Shrimp, Alvinocaris Markensis." Journal of the Marine Biological Association of the United Kingdom 77, no. 4 (1997): 1097–108. http://dx.doi.org/10.1017/s0025315400038650.

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The bresiliid shrimp Alvinocaris markensis is a predator that inhabits the base of sulphide mounds built by the black smoker chimneys of active hydrothermal vents at the Snake Pit site on the Mid-Atlantic Ridge. Casual examination of animals collected with theDSV ‘Alvin’ suggests that, like other biesiliid shrimp from hydrothermal vents, the eyes of this species are adapted for vision in very dim light. However, examination of the structure and ultrastructure of eyes of animals collected and immediately fixed shows that the expected massive array of photoreceptors is partially or completely mi
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14

Christoffersen, Martin L. "Phylogenetic relationships between Oplophoridae, Atyidae, Pasiphaeidae, Alvinocarididae Fam. N., Bresiliidae, Psalidopodidae and Disciadidae (Crustacea caridea atyoidea)." Boletim de Zoologia 10, no. 10 (1986): 273. http://dx.doi.org/10.11606/issn.2526-3358.bolzoo.1986.122357.

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Os Pasiphaeoidea syn.n., Psalidopodoidea syn.n. e Bresilioidea syn.n. foram incluídos nos Atyoidea (mais correntemente conhecidos como Oplophoroidea), para se obter um conceito natural deste táxon. A monofilia do táxon Atyoidea emendado é indicado pelo exópodo reduzido do primeiro maxilípede. Uma hierarquia de 20 subgrupos monofiléticos, delimitados por 42 novidades evolutivas hipotéticas, é sintetizada num cladograma. A seguinte classificação filogenética sequenciada é proposta: Superfamília Atyoidea; Família Oplophoridae; Família Atyidae; Subfamília Xiphocaridinae; Gênero Xiphocaris; Subfamí
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15

Pereira, Olívia S., Maurício Shimabukuro, Angelo F. Bernardino, and Paulo Y. G. Sumida. "Molecular affinity of Southwest Atlantic Alvinocaris muricola with Atlantic Equatorial Belt populations." Deep Sea Research Part I: Oceanographic Research Papers 163 (September 2020): 103343. http://dx.doi.org/10.1016/j.dsr.2020.103343.

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16

Ramirez-Llodra, Eva, and Michel Segonzac. "Reproductive biology of Alvinocaris muricola (Decapoda: Caridea: Alvinocarididae) from cold seeps in the Congo Basin." Journal of the Marine Biological Association of the United Kingdom 86, no. 6 (2006): 1347–56. http://dx.doi.org/10.1017/s0025315406014378.

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The caridean shrimp Alvinocaris muricola has been observed forming high density populations over mussel beds on the giant pockmark cold seep site Regab in the Gulf of Guinea at 3150 m depth. Samples were collected using the ROV Victor 6000, a beam trawl and a TV grab from two sites. The specimens were sexed and measured for population structure analysis. In one sample the sex ratio was 1:1, but the other sample had a sex ratio significantly biased towards females. The maximum size of females is larger than males. A sub-sample was used for gametogenesis and fecundity analysis. The oogenesis and
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17

Koyama, Sumihiro, Takahiko Nagahama, Noriyuki Ootsu, et al. "Survival of Deep-Sea Shrimp (Alvinocaris sp.) During Decompression and Larval Hatching at Atmospheric Pressure." Marine Biotechnology 7, no. 4 (2005): 272–78. http://dx.doi.org/10.1007/s10126-004-3050-0.

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18

Komai, Tomoyuki, and Michel Segonzac. "A new genus and species of alvinocaridid shrimp (Crustacea: Decapoda: Caridea) from hydrothermal vents on the North Fiji and Lau Basins, south-western Pacific." Journal of the Marine Biological Association of the United Kingdom 84, no. 6 (2004): 1179–88. http://dx.doi.org/10.1017/s0025315404010628h.

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Nautilocaris saintlaurentae gen. nov., sp. nov., is described and illustrated from hydrothermal vents in the North Fiji Basin and Lau Basin in the south-western Pacific. This new taxon is assigned to the Alvinocarididae. It has a well-developed, dorsally dentate rostrum, carapace with pterygostomian spine present, eye broadly fused mesially, epipod–setobranch complex present above pereopods, and appendix internae on second to fourth pleopods greatly reduced. This combination of characters places it in an intermediate position between a group of species in the genus Alvinocaris with well develo
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19

Tokuda, Gaku, Akinori Yamada, Kazuma Nakano, Nao O. Arita, and Hideo Yamasaki. "Colonization of Sulfurovum sp. on the gill surfaces of Alvinocaris longirostris, a deep-sea hydrothermal vent shrimp." Marine Ecology 29, no. 1 (2008): 106–14. http://dx.doi.org/10.1111/j.1439-0485.2007.00211.x.

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Aguzzi, Jacopo, Eva Ramirez-Llodra, Guy Telesnicki, and Mercedes Camps. "Day-night activity rhythm of the cold seep shrimp Alvinocaris stactophila (Caridea: Alvinocarididae) from the Gulf of Mexico." Journal of the Marine Biological Association of the United Kingdom 87, no. 5 (2007): 1175–80. http://dx.doi.org/10.1017/s0025315407057311.

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The activity rhythm of the cold seep shrimp Alvinocaris stactophila from the Gulf of Mexico slope (650 m depth) was investigated in the laboratory in relation to an artificial 12 h light-dark regime. Animals were sampled with a submersible and transferred into individual aquaria where their activity was monitored for 5 d by taking digital video snapshots every 30 s. An observer analysed the footage by counting the number of times an animal crossed two perpendicular lines drawn on a PC screen per 30 min interval. Resulting time series were represented over consecutive days and the waveform anal
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Hui, Min, Qian Xin, Jiao Cheng, and Zhongli Sha. "Characterization and Comparison of Eye Development and Phototransduction Genes in Deep- and Shallow-Water Shrimp Alvinocaris longirostris and Palaemon carinicauda." Diversity 14, no. 8 (2022): 653. http://dx.doi.org/10.3390/d14080653.

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The investigations of the molecular components of eye development and phototransduction in deep-sea species are important to elucidate the mechanism of their adaptation to dim light. In this study, eye transcriptomes of the shrimp Alvinocaris longirostris from the deep-sea chemosynthetic ecosystem and the shallow-water shrimp Palaemon carinicauda were compared. Two Pax6 homologs with low expression levels were identified in both species, which are essential transcription factors in eye development. This finding implies that the development of the two shrimp eyes at early embryo–larvae stages m
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Hui, Min, Jiao Cheng, and Zhongli Sha. "Adaptation to the deep-sea hydrothermal vents and cold seeps: Insights from the transcriptomes of Alvinocaris longirostris in both environments." Deep Sea Research Part I: Oceanographic Research Papers 135 (May 2018): 23–33. http://dx.doi.org/10.1016/j.dsr.2018.03.014.

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23

Van Dover, CL. "A comparison of stable isotope ratios (1807160 and 13C/12C) between two species of hydrothermal vent decapods {Alvinocaris lusca and Munidopsis subsquamosa)." Marine Ecology Progress Series 31 (1986): 295–99. http://dx.doi.org/10.3354/meps031295.

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Gebruk, A. V., E. C. Southward, H. Kennedy, and A. J. Southward. "Food sources, behaviour, and distribution of hydrothermal vent shrimps at the Mid-Atlantic Ridge." Journal of the Marine Biological Association of the United Kingdom 80, no. 3 (2000): 485–99. http://dx.doi.org/10.1017/s0025315400002186.

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Five species of bresilioid shrimp were investigated at seven hydrothermal sites on the Mid-Atlantic Ridge: Menez Gwen, Lucky Strike, Rainbow, Broken Spur, TAG, Snake Pit and Logatchev. Samples were prepared for analysis of stable isotopes, elemental composition and lipids. Shrimp behaviour was observed from the submersible ‘Alvin’ and in the laboratory aboard RV ‘Atlantis’. The distribution and zonation of the shrimp species was recorded. Juvenile shrimp of all species arrive at the vents carrying reserves of photosynthetic origin, built-up in the pelagic larval stages. These reserves are used
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25

Decelle, Johan, Ann Andersen, and Stéphane Hourdez. "Morphological adaptations to chronic hypoxia in deep-sea decapod crustaceans from hydrothermal vents and cold seeps." Marine biology 157 (March 6, 2010): 1259–69. https://doi.org/10.1007/s00227-010-1406-8.

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Animals inhabiting hydrothermal vents and cold seeps face conditions that are challenging for survival. In particular these two habitats are characterized by chronic hypoxia, sometimes reaching complete anoxia. The characteristics of the scaphognathite and gills were studied in 4 species of shrimp and 3 species of crabs from hydrothermal vents and cold seeps, in order to highlight potential adaptations that could enhance oxygen acquisition in comparison to shallow-water relatives. All the vent and seep species studied here exhibit significantly larger scaphognathites, likely allowing more wate
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Copley, JTP, and CM Young. "Seasonality and zonation in the reproductive biology and population structure of the shrimp Alvinocaris stactophila (Caridea: Alvinocarididae) at a Louisiana Slope cold seep." Marine Ecology Progress Series 315 (June 13, 2006): 199–209. http://dx.doi.org/10.3354/meps315199.

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YAHAGI, TAKUYA, HIROMI WATANABE, SHIGEAKI KOJIMA, GIRISH BEEDESSEE, and TOMOYUKI KOMAI. "First record and a new species of Alvinocaris Williams & Chace, 1982 (Crustacea: Decapoda: Caridea: Alvinocarididae) from the Indian Ocean." Zootaxa 3893, no. 1 (2014): 101. http://dx.doi.org/10.11646/zootaxa.3893.1.4.

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Sun, Qing-lei, Zhi-gang Zeng, Shuai Chen, and Li Sun. "First Comparative Analysis of the Community Structures and Carbon Metabolic Pathways of the Bacteria Associated with Alvinocaris longirostris in a Hydrothermal Vent of Okinawa Trough." PLOS ONE 11, no. 4 (2016): e0154359. http://dx.doi.org/10.1371/journal.pone.0154359.

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29

Gebruk, A. V., P. Chevaldonné, T. Shank, R. A. Lutz, and R. C. Vrijenhoek. "Deep-sea hydrothermal vent communities of the Logatchev area (14°45′N, Mid-Atlantic Ridge): diverse biotopes and high biomass." Journal of the Marine Biological Association of the United Kingdom 80, no. 3 (2000): 383–93. http://dx.doi.org/10.1017/s0025315499002088.

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Results from recent biological studies (including three Alvin dives in July 1997) of the southernmost deep-sea hydrothermal area known on the Mid-Atlantic Ridge (MAR), the Logatchev hydrothermal area, are described. The Logatchev area includes three vent fields, each with a different geological setting corresponding to: (1) a large sulphide mound with ‘smoking craters’; (2) an active chimney complex (known as ‘Irina-2’); and (3) a diffuse flow through soft sediment (‘Anya's Garden’). Hydrothermal communities found at these fields differ considerably: Anya's Garden is dominated by vesicomyid cl
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Zelnio, Kevin A., and Stéphane Hourdez. "A New Species of Alvinocaris (Crustacea: Decapoda: Caridea: Alvinocarididae) from Hydrothermal Vents at The Lau Basin, Southwest Pacific, and a Key to The Species of Alvinocarididae." Proceedings of the Biological Society of Washington 122, no. 1 (2009): 52–71. http://dx.doi.org/10.2988/07-28.1.

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Wang, Aiyang, Zhongli Sha, and Min Hui. "Full-Length Transcriptome Comparison Provides Novel Insights into the Molecular Basis of Adaptation to Different Ecological Niches of the Deep-Sea Hydrothermal Vent in Alvinocaridid Shrimps." Diversity 14, no. 5 (2022): 371. http://dx.doi.org/10.3390/d14050371.

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The deep-sea hydrothermal vent ecosystem is one of the extreme chemoautotrophic environments. Shinkaicaris leurokolos Kikuchi and Hashimoto, 2000, and Alvinocaris longirostris Kikuchi and Ohta, 1995, are typically co-distributed and closely related alvinocaridid shrimps in hydrothermal vent areas with different ecological niches, providing an excellent model for studying the adaptive evolution mechanism of animals in the extreme deep-sea hydrothermal vent environment. The shrimp S. leurokolos lives in close proximity to the chimney vent discharging high-temperature fluid, while A. longirostris
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Pond, DW, DR Dixon, MV Bell, AE Fallick, and JR Sargent. "Occurrence of 16:2(n-4) and 18:2(n-4) fatty acids in the lipids of the hydrothermal vent shrimps Rimicaris exoculata and Alvinocaris markensis: nutritional and trophic implications." Marine Ecology Progress Series 156 (1997): 167–74. http://dx.doi.org/10.3354/meps156167.

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Baldrighi, E., A. Vanreusel, D. Zeppilli, R. Sandulli, and M. Segonzac. "Occurrence of Chromadorita regabi sp. nov. (Nematoda: Adenophorea), a nematode egg predator of Alvinocaris muricola (Crustacea: Decapoda: Caridea: Alvinocarididae) from a deep cold seep area of the Gulf of Guinea." European Zoological Journal 85, no. 1 (2018): 299–311. http://dx.doi.org/10.1080/24750263.2018.1498926.

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Hui, Min, Aiyang Wang, Jiao Cheng, and Zhongli Sha. "Full-length 16S rRNA amplicon sequencing reveals the variation of epibiotic microbiota associated with two shrimp species of Alvinocarididae: possibly co-determined by environmental heterogeneity and specific recognition of hosts." PeerJ 10 (August 8, 2022): e13758. http://dx.doi.org/10.7717/peerj.13758.

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Shrimps of the family Alvinocarididae, endemic species to deep sea chemosynthetic ecosystems, harbor epibiotic microbes on gills which probably play important roles in the survival of the shrimps. Among them, Alvinocaris longirostris and Shinkaicaris leurokolos occupy different ecological niches within the same hydrothermal vent in Okinawa Trough, and A. longirostris also exists in a methane seep of the South China Sea. In this study, full-length 16S rRNA sequences of the gill associated bacteria of two alvinocaridid species from different chemosynthetically ecological niches were first captur
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Cornejo-Granados, Fernanda, Luigui Gallardo-Becerra, Miriam Leonardo-Reza, Juan Pablo Ochoa-Romo, and Adrian Ochoa-Leyva. "A meta-analysis reveals the environmental and host factors shaping the structure and function of the shrimp microbiota." PeerJ 6 (August 10, 2018): e5382. http://dx.doi.org/10.7717/peerj.5382.

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The shrimp or prawn is the most valuable traded marine product in the world market today and its microbiota plays an essential role in its development, physiology, and health. The technological advances and dropping costs of high-throughput sequencing have increased the number of studies characterizing the shrimp microbiota. However, the application of different experimental and bioinformatics protocols makes it difficult to compare different studies to reach general conclusions about shrimp microbiota. To meet this necessity, we report the first meta-analysis of the microbiota from freshwater
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Yang, Jin-Shu, Bo Lu, Dian-Fu Chen, et al. "When Did Decapods Invade Hydrothermal Vents? Clues from the Western Pacific and Indian Oceans." Molecular Biology and Evolution 30, no. 2 (2012): 305–9. http://dx.doi.org/10.1093/molbev/mss224.

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Abstract Hydrothermal vents are typically located in midocean ridges and back-arc basins and are usually generated by the movement of tectonic plates. Life thrives in these environments despite the extreme conditions. In addition to chemoautotrophic bacteria, decapod crustaceans are dominant in many of the hydrothermal vents discovered to date. Contrary to the hypothesis that these species are remnants of relic fauna, increasing evidence supports the notion that hydrothermal vent decapods have diversified in more recent times with previous research attributing the origin of alvinocarid shrimps
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Wang, Yiting, Lijun Liu, Min Yu, et al. "Carideicomes alvinocaridis gen. nov., sp. nov., a marine bacterium isolated from shrimp gill in a hydrothermal field of Okinawa Trough." International Journal of Systematic and Evolutionary Microbiology 70, no. 3 (2020): 1777–84. http://dx.doi.org/10.1099/ijsem.0.003971.

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A Gram-stain-negative, strictly aerobic, oval-shaped, non-motile bacterium with no flagella, designated strain SCR17T, was isolated from a shrimp gill habitat in Tangyin hydrothermal field of Okinawa Trough. Phylogenetic analysis based on 16S rRNA gene sequences indicated that strain SCR17T formed a lineage within the family ‘ Rhodobacteraceae ’, and shared 16S rRNA gene sequence similarity of 93.2–96.2 % to the related genera Aquicoccus and Roseivivax . Strain SCR17T was able to grow with 0–14 % (w/v) NaCl (optimum, 9–10 %). The sole respiratory quinone was ubiquinone-10. The major polar lipi
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Zbinden, Magali, and Marie-Anne Cambon-Bonavita. "Occurrence of Deferribacterales and Entomoplasmatales in the deep-sea Alvinocarid shrimp Rimicaris exoculata gut." FEMS Microbiology Ecology 46, no. 1 (2003): 23–30. http://dx.doi.org/10.1016/s0168-6496(03)00176-4.

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Liu, Lijun, Min Yu, Shun Zhou, et al. "Muricauda alvinocaridis sp. nov., isolated from shrimp gill from the Okinawa Trough." International Journal of Systematic and Evolutionary Microbiology 70, no. 3 (2020): 1666–71. http://dx.doi.org/10.1099/ijsem.0.003953.

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A Gram-stain-negative, strictly aerobic, non-motile, long, straight-rod and non-flagellated marine bacterium strain, designated SCR12T, was isolated from the gill of a shrimp collected in the Tangyin hydrothermal field of the Okinawa Trough. The growth temperature was in the range of 16–40 °C and the optimum temperature was 37 °C. Optimal growth occurred at pH 6.5 and in the presence of 3 % (w/v) NaCl. The predominant isoprenoid quinone of strain SCR12T was menaquinone-6 (MK-6). The predominant fatty acids (>10 %) were iso-C15 : 0 (44.2 %), iso-C15 : 1 G (19.0 %) and iso-C17 : 0 3-OH (12.1
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Liu, Lijun, Min Yu, Shun Zhou, et al. "Corrigendum: Muricauda alvinocaridis sp. nov., isolated from shrimp gill from the Okinawa Trough." International Journal of Systematic and Evolutionary Microbiology 70, no. 9 (2020): 5183. http://dx.doi.org/10.1099/ijsem.0.004399.

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Sun, Shao’e, Zhongli Sha, and Yanrong Wang. "Phylogenetic position of Alvinocarididae (Crustacea: Decapoda: Caridea): New insights into the origin and evolutionary history of the hydrothermal vent alvinocarid shrimps." Deep Sea Research Part I: Oceanographic Research Papers 141 (November 2018): 93–105. http://dx.doi.org/10.1016/j.dsr.2018.10.001.

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Wang, Yiting, Lijun Liu, Min Yu, et al. "Corrigendum: Carideicomes alvinocaridis gen. nov., sp. nov., a marine bacterium isolated from shrimp gill in a hydrothermal field of Okinawa Trough." International Journal of Systematic and Evolutionary Microbiology 70, no. 9 (2020): 5184. http://dx.doi.org/10.1099/ijsem.0.004400.

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Dai, Qi, Ting Xu, Yixuan Li, et al. "Comparative Population Genetics of Two Alvinocaridid Shrimp Species in Chemosynthetic Ecosystems of the Western Pacific." Integrative Zoology, January 27, 2025. https://doi.org/10.1111/1749-4877.12954.

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ABSTRACTDeep‐sea shrimps from the family Alvinocarididae are prominent inhabitants of chemosynthesis‐based habitats worldwide. However, their genetic diversity and population connectivity remain poorly understood due to limited sampling. To fill these knowledge gaps, we compared the population genetics of two vent‐ and seep‐dwelling alvinocaridid species with overlapped geographic ranges between the South China Sea and the Manus Basin. Alvinocaris longirostris has a wider distribution, ranging from 35°N to 3°S and at depths of 930 to 1736 m, while Alvinocaris kexueae is more restricted, found
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Hui, Min, Jiao Cheng, and Zhongli Sha. "First comprehensive analysis of lysine acetylation in Alvinocaris longirostris from the deep-sea hydrothermal vents." BMC Genomics 19, no. 1 (2018). http://dx.doi.org/10.1186/s12864-018-4745-3.

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Xin, Qian, Min Hui, Chaolun Li, and Zhongli Sha. "Eyes of differing colors in Alvinocaris longirostris from deep-sea chemosynthetic ecosystems: genetic and molecular evidence of its formation mechanism." Journal of Oceanology and Limnology, May 9, 2020. http://dx.doi.org/10.1007/s00343-020-9312-5.

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Methou, P., NO Ogawa, H. Nomaki, N. Ohkouchi, C. Chen, and K. Schnabel. "Genetic connectivity and isotopic niches of alvinocaridid shrimps from chemosynthetic habitats in Aotearoa/New Zealand, with a new Alvinocaris species." Marine Ecology Progress Series, 2024. http://dx.doi.org/10.3354/meps14611.

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Ma, Wenlong, Jiawei Li, Xiaolin Qu, et al. "Liquid–Solid Triboelectric Nanogenerator‐Based DNA Barcode Detection Biosensor for Species Identification." Advanced Science, December 4, 2024. https://doi.org/10.1002/advs.202408718.

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AbstractDNA barcode detection method is widely applied for species identification, which is imperative to evaluate the effect of human economic activities on the biodiversity of ecosystem. However, the wide utilization of existing detection biosensors is limited by bulky and expensive instruments, such as Raman spectroscopy and electrochemical station. Herein, a liquid–solid triboelectric nanogenerator (TENG)‐based DNA barcode detection biosensor is proposed, which consists of water flow, fluid channel, and PDMS film attached by specifically designed capture probe. Through sequentially combini
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Gaytán-Caballero, Adriana, Florence Schubotz, Ian R. MacDonald, and Elva G. Escobar-Briones. "Descriptive ecology of abyssal decapods from Chapopote Knoll (southwestern Gulf of Mexico)." Frontiers in Marine Science 12 (February 7, 2025). https://doi.org/10.3389/fmars.2025.1534328.

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The Chapopote Knoll at 3200 m depth, in the southern Gulf of Mexico harbors highly diverse benthic habitats, including massive asphalt flows and surficial gas hydrates with gas seepage. Its associated benthic megafauna includes endemic cold-seep species and background species. This study describes the benthic habitat preferences, distribution patterns and diets of three crustacean species, the caridean shrimp Alvinocaris muricola and the galatheids Munidopsis geyeri and M. exuta. High-resolution imaging recorded eight habitats and helped depict their spatial distributions. A. muricola aggregat
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Suh, Yeon Jee, Se-Jong Ju, Min-Seob Kim, Hyuntae Choi, and Kyung-Hoon Shin. "Trophic diversity of chemosymbiont hosts in deep-sea hydrothermal vents using amino acid nitrogen isotopes." Frontiers in Marine Science 10 (December 11, 2023). http://dx.doi.org/10.3389/fmars.2023.1204992.

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Chemosymbiotic species inhabiting deep-sea hydrothermal vents are known to rely on microbial symbionts for nutrition. However, the relative contributions of heterotrophic energy sources to their diets remain poorly understood. In this study, we investigate the trophic positions (TP) of symbiont-bearing taxa, including vent mussels, snails, and shrimps, and examine the contribution of copepods and detrital organic matter (OM) to the food chain. Amino acid nitrogen isotopic compositions (δ15NAA) were used to investigate the TP of vent mussels (Bathymodiolus septemdierum and Gigantidas vrijenhoek
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Shin, Ji-Yoon, and Jin-Sook Park. "Muricauda spongiicola sp. nov., isolated from the sponge Callyspongia elongata." International Journal of Systematic and Evolutionary Microbiology 73, no. 2 (2023). http://dx.doi.org/10.1099/ijsem.0.005702.

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A novel Gram-stain-negative, thin-rod-shaped, aerobic, non-motile and yellow-pigmented marine bacterium (designated strain 2012CJ35-5T) was isolated from a marine sponge Callyspongia elongata sampled in Jeju-do, Republic of Korea. Phylogenetic analysis based on 16S rRNA gene sequences revealed that strain 2012CJ35-5T belonged to the family Flavobacteriaceae , and was most closely related to Muricauda olearia KCCM 90075T (96.3 %), Muricauda alvinocaridis JCM 33425T (95.7 %), Muricauda flava KCTC 22665T (95.6 %), Muricauda koreensis KCTC 52351T (95.6 %) and Muricauda eckloniae KCTC 22266T (94.9
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