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Dissertations / Theses on the topic 'Anaerobic bacteria Molecular aspects'

Author: Grafiati

Published: 4 June 2021

Last updated: 29 January 2023

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1

Woo, Kei-sheng Gibson, and 吳基昇. "Molecular epidemiology of anaerobic gram-positive bacilli bacteremia and discovery of six novel anaerobic gram-positive bacilli." Thesis, The University of Hong Kong (Pokfulam, Hong Kong), 2003. http://hub.hku.hk/bib/B29762984.

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2

Zhao, Dongqing, and 趙冬卿. "Molecular characterization of a leptotrichia species." Thesis, The University of Hong Kong (Pokfulam, Hong Kong), 2009. http://hub.hku.hk/bib/B42925253.

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3

Chan, On-chim, and 陳安潛. "Characterization of microbial consortia in anaerobic granular sludge: a ribosomal RNA-based molecular approach." Thesis, The University of Hong Kong (Pokfulam, Hong Kong), 2000. http://hub.hku.hk/bib/B31239924.

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4

Srimanote, Potjanee. "Analysis of putative virulence factors of a locus of enterocyte effacement-negative shiga-toxigenic Escherichia coli O113:H21 strain." Title page, contents and abstract only, 2003. http://web4.library.adelaide.edu.au/theses/09PH/09php863.pdf.

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"February 2003." Addendum and corrigenda inserted at back Includes bibliographical references (leaves 249-272) Aims to identify and characterise potential virulence-associated factors from the locus of enterocyte effacement-negative shiga-toxigenic Escherichia coli O113:H21 strain 98NK2 which was responsible for an outbreak of haemolytic uremic syndrome. Particular attention was focused on putative virulence genes encoded on the megaplasmid of this strain.

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5

Hamdi, Olfa. "Digestion anaérobie d'effluents d'une conserverie de thon tunisienne : aspects biotechnologiques et microbiologiques." Thesis, Aix-Marseille, 2015. http://www.theses.fr/2015AIXM4711.

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Deux réacteurs, R1 et R2, ont été alimentés quotidiennement avec les effluents à traiter à des TRH de 13 jours et de 20 jours, respectivement. Les résultats obtenus ont montré un taux d'abattement de la dégradation de la matière organique de 53% pour R2, contre 35% pour R1. Afin de mieux comprendre le fonctionnement biologique de ces réacteurs, nous avons exploré les communautés microbiennes d'importance écologique impliquées dans la dégradation de la matière organique contenue dans ces effluents. Cela a été réalisé dans un premier temps par des approches moléculaires en utilisant la technique

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6

Zhao, Dongqing. "Molecular characterization of a leptotrichia species." Click to view the E-thesis via HKUTO, 2009. http://sunzi.lib.hku.hk/hkuto/record/B42925253.

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7

Han, Ping, and 韓平. "Molecular detection methods and characterization of anammox bacteria from different ecological niches." Thesis, The University of Hong Kong (Pokfulam, Hong Kong), 2014. http://hdl.handle.net/10722/197075.

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8

Cáceres, Mercedes. "Ecological aspects of antimicrobial susceptibility of anaerobic bacteria in Nicaragua /." Stockholm, 1999. http://diss.kib.ki.se/1999/91-628-3801-6/.

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9

Amano, Teruki. "A molecular ecological study on anaerobic ammonium oxidizing (anammox) bacteria in coastal sediment." Kyoto University, 2011. http://hdl.handle.net/2433/142330.

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Kyoto University (京都大学)<br>0048<br>新制・課程博士<br>博士(農学)<br>甲第16132号<br>農博第1868号<br>新制||農||990(附属図書館)<br>学位論文||H23||N4602(農学部図書室)<br>28711<br>京都大学大学院農学研究科応用生物科学専攻<br>(主査)教授左子芳彦, 教授藤原建紀, 教授澤山茂樹<br>学位規則第4条第1項該当

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10

Lowe, Kristine L. "Biogeochemical cycling of metals in redox-stratified marine environments : role of anaerobic microorganisms." Diss., Georgia Institute of Technology, 1999. http://hdl.handle.net/1853/25187.

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11

Schutte, Mart-Alet (Martha Aletta). "Molecular characterization of Sulfobacillus and related organisms." Thesis, Stellenbosch : Stellenbosch University, 2004. http://hdl.handle.net/10019.1/53753.

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Thesis (MSc)--University of Stellenbosch, 2004.<br>ENGLISH ABSTRACT: Thirteen Sulfobacillus strains from different geographical locations and two Alicyclobacillus strains were included in this study. These organisms proved to be moderately thermophillic (two different sets of optimal temperatures of 45°C and 55°C were found), Gram-positive, endospore forming bacteria. The pH optima of the strains tested was pH 2.5 and the pH range lay between pH 1.5 and pH 5.0. It was established that some strains of Sulfobacillus had the capacity for anaerobic growth when using ferric iron as an electr

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12

Smith, Kiara L. "Anaerobic Degradation of Polycyclic Aromatic Hydrocarbons at a Creosote-Contaminated Superfund Site and the Significance of Increased Methane Production in an Organophilic Clay Sediment Cap." PDXScholar, 2010. https://pdxscholar.library.pdx.edu/open_access_etds/101.

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The overall goal of this work was to investigate microbial activity leading to the anaerobic degradation of polycyclic aromatic hydrocarbons and an organophilic clay sediment cap used at a creosote-contaminated Superfund site. To determine whether or not PAHs were being degraded under anaerobic conditions in situ, groundwater and sediment porewater samples were analyzed for metabolic biomarkers, or metabolites, formed in the anaerobic degradation of naphthalene (a low-molecular weight PAH). In addition, a groundwater push-pull method was developed to evaluate whether the transformation of deut

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13

Olofsson, Magnus. "Microbiological Surveillance in Primary Health Care : New Aspects of Antimicrobial Resistance and Molecular Epidemiology in an Ageing Population." Doctoral thesis, Linköpings universitet, Institutionen för medicin och hälsa, 2016. http://urn.kb.se/resolve?urn=urn:nbn:se:liu:diva-133246.

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Background The inexorable rise in antimicrobial resistance (AMR) interferes with the goals of health care services around the world, given how critical the antibacterials are in making infections treatable and surgical procedures doable. Nursing homes residents have been identified as a reservoir for AMR, possibly due to the combination of being physically and mentally frail, frequently treated with antibacterials, and frequently moved between nursing home and hospital. Microbiological surveillance is a key countermeasure against further AMR development. Yet, surveillance data is easily biased

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14

Tshivhunge, Azwiedziswi Sylvia. "Enzymology of activated sewage sludge during anaerobic treatment of wastewaters : identification, characterisation, isolation and partial purification of proteases." Thesis, Rhodes University, 2001. http://hdl.handle.net/10962/d1004072.

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During anaerobic digestion bacteria inside the digester require a carbon source for their growth and metabolism, sewage sludge was used as a carbon source in this study. The COD content was used to measure the disappearance of the substrate. COD content was reduced by 48.3% and 49% in the methanogenic and sulphidogenic bioreactors, respectively, while sulphate concentration was reduced by 40%, producing 70mg/L of hydrogen sulphide as the end product over the first 5-7 days. Sulphate (which is used as a terminal electron acceptor of sulphur reducing bacteria) has little or no effect on the sulp

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15

嚴德貞 and Tak-ching Yim. "Molecular characterization of a rare bacterial pathogen causing psoas abscess." Thesis, The University of Hong Kong (Pokfulam, Hong Kong), 2003. http://hub.hku.hk/bib/B31971404.

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16

Flemming, Leonard (Leonard Arnold). "Molecular characterisation of Flavobacterium spp. and investigation of their biofilm-forming capacity in the tilapia aquaculture system." Thesis, Stellenbosch : University of Stellenbosch, 2006. http://hdl.handle.net/10019.1/17351.

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Thesis (MSc)--University of Stellenbosch, 2006.<br>ENGLISH ABSTRACT: Fish infections caused by pathogenic Flavobacterium spp. are a major problem in the aquaculture industry worldwide, often leading to large economic losses. Thirty-two Flavobacterium spp. isolates, obtained from various diseased fish species and biofilm growth, were characterised genetically using 16S rRNA gene sequencing, 16S rRNA gene PCR restriction fragment length polymorphism (RFLP), randomly amplified polymorphic DNA (RAPD) PCR, repetitive extragenic palindromic (REP) element PCR, plasmid profiling, whole cell pro

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17

Ticak, Tomislav. "Anoxic quaternary amine utilization by archaea and bacteria through a non-L-pyrrolysine methyltransferase; insights into global ecology, human health, and evolution of anaerobic systems." Miami University / OhioLINK, 2015. http://rave.ohiolink.edu/etdc/view?acc_num=miami1429897518.

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18

Peat, Scott M. "Utilization of Phylogenetic Systematics, Molecular Evolution, and Comparative Transcriptomics to Address Aspects of Nematode and Bacterial Evolution." BYU ScholarsArchive, 2010. https://scholarsarchive.byu.edu/etd/2535.

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Both insect parasitic/entomopathogenic nematodes and plant parasitic nematodes are of great economic importance. Insect parasitic/entomopathogenic nematodes provide an environmentally safe and effective method to control numerous insect pests worldwide. Alternatively, plant parasitic nematodes cause billions of dollars in crop loss worldwide. Because of these impacts, it is important to understand how these nematodes evolve, and, in the case of entomopathogenic nematodes, how their bacterial symbionts evolve. This dissertation contains six chapters. Chapter one is a review of DNA markers and t

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19

Senhorinho, Gerusa Neyla Andrade. "Análise microbiológica e molecular de espécies de Porphyromonas e Fusobacterium isoladas de cães com e sem periodontite e sua relação com a resposta imunológica." Universidade de São Paulo, 2010. http://www.teses.usp.br/teses/disponiveis/42/42132/tde-19052010-154516/.

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A periodontite é uma resposta inflamatória desencadeada por um complexo biofilme constituído por diversos microrganisnos, particularmente por bactérias anaeróbias, tais como Porphyromonas spp. e Fusobacterium spp. Essas bactérias produzem vários fatores de virulência capazes de atuar no início e progressão da doença. Cem amostras subgengivais foram analisadas, sendo 50 de cães com periodontite e 50 de cães sadios, obtendo-se 144 isolados bacterianos identificados como pertencentes aos gêneros Porphyromonas e Fusobacterium. A produção de hemolisinas e hemaglutininas, susceptibilidade aos soros

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20

Borrel, Guillaume. "Diversité des archées et implication de la composante procaryote dans le cycle biogéochimique du méthane en milieu aquatique continental : études taxonomiques et fonctionnelles dans la colonne d'eau et les sédiments anoxiques du lac Pavin." Phd thesis, Université Blaise Pascal - Clermont-Ferrand II, 2011. http://tel.archives-ouvertes.fr/tel-00932300.

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Le méthane, un des principaux gaz à effet de serre, est majoritairement produit et consommé par l'activité métabolique de microorganismes affiliés aux domaines des Archaea et des Bacteria. Afin d'appréhender le cycle biogéochimique du méthane, il est essentiel d'identifier l'ensemble des acteurs impliqués dans ce dernier ainsi que les facteurs environnementaux modulant leurs activités. Les lacs d'eau douce constituent une source importante de méthane, car, dans ces écosystèmes, les conditions environnementales favorisent la méthanogenèse au détriment d'autres processus terminaux de la dégradat

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21

Skene, Ian. "Characterisation of a tannin acylhydrolase from a ruminal selenomonad / by Ian Skene." 1996. http://hdl.handle.net/2440/18928.

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Bibliography: leaves 189-205.<br>xi, 205 leaves : ill. ; 30 cm.<br>Title page, contents and abstract only. The complete thesis in print form is available from the University Library.<br>The aim of this PhD project is to screen feral goat rumen fluid for the presence of new organisms that may play a role in the detoxification of tannins and to investigate their mechanisms of action. An enrichment experiment is conducted to screen rumen fluid for anaerobic bacteria capable of growing in the presence of high levels of "Acacia" condensed tannin. Four morphologically-distinct bacteria are isolated,

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Skene, Ian. "Characterisation of a tannin acylhydrolase from a ruminal selenomonad / by Ian Skene." Thesis, 1996. http://hdl.handle.net/2440/18928.

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Bibliography: leaves 189-205.<br>xi, 205 leaves : ill. ; 30 cm.<br>The aim of this PhD project is to screen feral goat rumen fluid for the presence of new organisms that may play a role in the detoxification of tannins and to investigate their mechanisms of action. An enrichment experiment is conducted to screen rumen fluid for anaerobic bacteria capable of growing in the presence of high levels of "Acacia" condensed tannin. Four morphologically-distinct bacteria are isolated, confirming that resistance is a property shared by more than one organism. One isolate is chosen at random for further

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23

Croal, Laura Rosemary. "Fe(II) Oxidation by Anaerobic Phototrophic Bacteria: Molecular Mechanisms and Geological Implications." Thesis, 2005. https://thesis.library.caltech.edu/2471/3/3_H2.pdf.

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In this thesis, the hypothesis that photoautotrophic Fe(II)-oxidizing bacteria catalyzed the deposition of Banded Iron Formations (BIFs), an enigmatic class of ancient sedimentary rocks is explored. Ecophysiological, geochemical, genetic and biochemical approaches are taken to elucidate the molecular mechanism of photoautotrophic Fe(II) oxidation in an effort to identify molecular biosignatures that are unique to this metabolism and capable of being preserved BIFs. In an ecophysiological approach, we show that Fe(II) oxidation by these phototrophs proceeds at appreciable rates in the presenc

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24

Montoya, Castaño Dolly [Verfasser]. "Anaerobic, solvent producing bacteria : molecular characterisation, polysaccharolytic activity and agroindustrial waste degradation / Dolly Montoya Castaño." 2003. http://d-nb.info/96989130X/34.

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25

Neves, Mónica Sofia Furtado Martins. "Bio-removal of toxic metals by metal resistant anaerobic bacteria: molecular characterization and performance studies." Doctoral thesis, 2010. http://hdl.handle.net/10400.1/1531.

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Tese de dout., Ciências Biotecnológicas (Biotecnologia Ambiental), Faculdade de Ciências e Tecnologia, Univ. do Algarve, 2010<br>The objective of the research described in this thesis was the identification and characterization of anaerobic bacterial communities with high metal resistance and ability for metal removal, thus with potential for application in bioremediation processes. A sulphate-reducing bacteria (SRB) consortium resistant to high concentrations of heavy metals (Fe, Cu, Zn), similar to those typically present in acid mine drainage (AMD), was obtained from a wastewater treat

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26

Lalbahadur, Tharnija. "Characterisation of the microbial communities present in an anaerobic baffled reactor utilising molecular techniques." Thesis, 2005. http://hdl.handle.net/10321/305.

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Thesis (M.Tech.: Biotechnology)-Dept. of Biotechnology, Durban Institute Of Technology, 2005 xxiii, 172 p. : ill. ; 30 cm<br>The provision of safe and sanitary water is a constitutional right and above all, a necessity of life. As a result of the rapid urbanisation and the past policies of apartheid, a large population of South Africa dwell in informal settlements, where there is very little hope of development, as the government does not possess the resources that are necessary for a full-scale sanitation programme. Therefore, on-site treatments have been considered to provide sanitation in t

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27

Okada, Shoko. "The thermal profile of enteric bacteria from Australian mammals : host and geographical effects." Master's thesis, 2001. http://hdl.handle.net/1885/147460.

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28

Lin, Shih-Yao, and 林詩耀. "Characterization of hydrocarbon degrading and plant growth promoting bacteria: from systematic classification and molecular detection aspects." Thesis, 2012. http://ndltd.ncl.edu.tw/handle/79153955891938951826.

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博士<br>國立中興大學<br>土壤環境科學系所<br>100<br>In the present study, the systematic classification and molecular detection of hydrocarbon degrading and plant growth promoting rhizobacteria were established. The hydrocarbons degrading bacteria were isolated from oil contaminated samples and the degrading capability was analyzed. Dehydrogenase and lipase were used to estimate the microbial activity within oil contaminated soil. The strategy of bioaugmentation was demonstrated that isolates Azospirillum picis CC-TAR-3T, Azospirillum rugosum CC-AFH-6T, Azospirillum formosense CC-Nfb-7T, Novosphingobium olei C

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29

Laughlin, Jamie B. A. "Molecular and physiological characterization of thiosulphate-oxidizing microbial associations prior to use in hydrogen sulphide biofiltration." 2000. http://hdl.handle.net/10413/4957.

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Interacting microbial associations capable of utilizing thiosulphate as an energy source were enriched/isolated from activated sludge, landfill site [mal covering soil and soil from an acid mine water drainage site. The isolates were designated Lf-I, Ws-2 and Am-3, respectively. Although hydrogen sulphide was the target molecule for gas biofiltration, thiosulphate, which is a key oxidized intermediate, was used in this study due to the difficulty of working with a toxic gas. Together with thiosulphate oxidation, the microbial associations were assessed for their abilities to oxidize dissolved

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30

Shin, Eun Jung. "Characterization of novel marine oligotrophic bacteria isolated from the Pacific Ocean : description of Marinivirgula fluito gen. nov., sp. nov., Marinivirgula obesa gen. nov., sp. nov. and Litincola parvulus gen. nov., sp. nov." Thesis, 2003. http://hdl.handle.net/1957/30417.

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31

Chihomvu, Patience. "Biochemical and molecular characterization of heavy metal resistant bacteria isolated from the Klip River, South Africa." Thesis, 2014. http://hdl.handle.net/10352/304.

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M. Tech. (Department of Biotechnology, Faculty of Engineering and Technology) Vaal University of Technology<br>The Klip River has suffered severe anthropogenic effects from industrial, agricultural, mining and domestic activities. As a result harmful contaminants such as heavy metals have accumulated in the river, causing microorganisms inhabiting the environment to develop mechanisms to protect them from the harmful effects of the contaminants. The current study deals with the isolation and characterization of heavy metal resistant bacteria isolated from the Klip River Catchment. Water and se

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32

Mukhuba, Mashudu. "Ecological guild of microbes that drive production of biogas from multiple feedstock." Diss., 2017. http://hdl.handle.net/10500/24518.

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Anaerobic digestion (AD) is becoming a widely adopted technology for conversion of organic waste and nutrient-rich fertiliser production due to its cost-effectiveness and sustainability. In this study, a batch experiment was conducted using five different types of food waste and cow dung (CD). No significant difference was observed among the four substrates that produced the highest methane (P<0.05). Based on the batch experiment results, two substrates were selected for semi-continuous digestion and the highest methane yield (67%) was obtained from co-digestion (CO). PCR-DGGE results revealed

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33

Ngobeni, Renay. "Molecular characterization of E.histolytica strains and the impact of host genetics on amoebic infection in Limpopo and Gauteng Province, South Africa." Diss., 2016. http://hdl.handle.net/123456789/424.

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34

Echelman, Daniel Jay. "Mechanics of Gram-positive bacterial cell adhesion." Thesis, 2018. https://doi.org/10.7916/D8PZ6SQ3.

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Bacteria adhere despite severe mechanical perturbations. In Gram-positive bacteria, this adhesion is dependent upon a set of extracellular proteins, most notably pili, that have a unique abundance of internal disulfide, isopeptide, and thioester bonds. How these cell adhesion proteins manage to withstand such mechanical assaults, and what role these internal covalent bonds play to that end, remain open questions. Herein, we apply single-molecule force spectroscopy to delve into the mechanical behavior of three Gram-positive pilus proteins. We find that structural components of the Actinomyces

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35

Oman, Tara Lynn. "Regulation of outer surface lipoprotein A in the Lyme disease spirochete Borrelia burgdorferi." Thesis, 2013. http://hdl.handle.net/1805/3629.

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Indiana University-Purdue University Indianapolis (IUPUI)<br>Borrelia burgdorferi, a bacterium which causes Lyme disease, is maintained in nature through a cycle involving two distinct hosts: a tick vector and a mammalian host. To adapt to these two diverse environments, B. burgdorferi undergoes dramatic alterations in its surface lipoprotein. Two essential lipoproteins, outer surface protein A (OspA) and outer surface protein C (OspC), are reciprocally regulated throughout the B. burgdorferi lifecycle. Very little is known about the regulation of OspA. These studies elucidate the regulatory m

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Anggriawan, Riyan. "Microbiological and Food Safety Aspects of Tempeh Production in Indonesia." Doctoral thesis, 2018. http://hdl.handle.net/11858/00-1735-0000-002E-E395-C.

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37

Carrasco, Sebastian Eduardo. "Elucidating the interaction of Borrelia burgdorferi OspC with phagocytes in the establishment of lyme borreliosis." 2015. http://hdl.handle.net/1805/7344.

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Indiana University-Purdue University Indianapolis (IUPUI)<br>Lyme disease, the most prevalent vector-borne illness in the United States, is a multisystem inflammatory disorder caused by infection with the spirochete Borrelia burgdorferi (Bb). This spirochete is maintained in nature through an enzootic cycle involving ticks and small mammals. The Bb genome encodes a large number of surface lipoproteins, many of which are expressed during mammalian infection. One of these lipoproteins is the major outer surface protein C (OspC) whose production is induced during transmission as spirochetes trans

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Thomas, William J. "Identification and characterization of type III effector proteins in plant-associated bacteria." Thesis, 2012. http://hdl.handle.net/1957/29206.

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Symbioses between microbes and multicellular eukaryotes are found in all biomes, and encompass a spectrum of symbiotic lifestyles that includes parasitism and disease, commensalism, and mutually beneficial interdependent host-microbe relationships. Regardless of outcome, these symbiotic lifestyles are governed by a complex molecular "courtship" between microbe and potential host. This courtship is the primary determinant of the host range of a given microsymbiont. Host immunity poses a formidable barrier to the establishment of host-microbe relationships, and the majority of microbial suito

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Whybrew, Jennafer M. "Aerobic Uptake of Cholesterol by Ergosterol Auxotrophic Strains in Candida glabrata & Random and Site-Directed Mutagenesis of ERG25 in Saccharomyces cerevisiae." 2012. http://hdl.handle.net/1805/2980.

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Indiana University-Purdue University Indianapolis (IUPUI)<br>Candida albicans and Candida glabrata are opportunistic human pathogens that are the leading cause of fungal infections, which are increasingly becoming the leading cause of sepsis in immunosuppressed individuals. C. glabrata in particular has become a significant concern due to the increase in clinical isolates that demonstrate resistance to triazole antifungal drugs, the most prevalent treatment for such infections. Triazole drugs target the ERG11 gene product and prevent C-14 demethylation of the first sterol intermediate, lanoste

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