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Relevant bibliographies by topics / Analysis of the variants

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Academic literature on the topic 'Analysis of the variants'

Author: Grafiati

Published: 4 June 2021

Last updated: 7 February 2022

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Journal articles on the topic "Analysis of the variants"

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He, Jianing, and Haibo Wang. "The Analysis of Zero Inventory Drift Variants Based on Simple and General Order-Up-To Policies." International Journal of Applied Metaheuristic Computing 1, no. 3 (2010): 37–52. http://dx.doi.org/10.4018/jamc.2010070103.

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In this paper, simple and general Order-Up-To (OUT) models with Minimum Mean Square Error (MMSE) forecast for the AR(1) demand pattern are introduced in the control engineering perspective. Important insights about lead-time misidentification are derived from the analysis of variance discrepancy. By applying the Final Value Theorem (FVI), a final value offset (i.e., inventory drift) is proved to exist and can be measured even though the actual lead-time is known. In this regard, to eliminate the inherent offset and keep the system variances acceptable, two kinds of zero inventory drift variant

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Jiang, Yu, Sai Chen, Xingyan Wang, et al. "Association Analysis and Meta-Analysis of Multi-Allelic Variants for Large-Scale Sequence Data." Genes 11, no. 5 (2020): 586. http://dx.doi.org/10.3390/genes11050586.

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There is great interest in understanding the impact of rare variants in human diseases using large sequence datasets. In deep sequence datasets of >10,000 samples, ~10% of the variant sites are observed to be multi-allelic. Many of the multi-allelic variants have been shown to be functional and disease-relevant. Proper analysis of multi-allelic variants is critical to the success of a sequencing study, but existing methods do not properly handle multi-allelic variants and can produce highly misleading association results. We discuss practical issues and methods to encode multi-allelic sites

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Hülsenbeck, Isabel, Mirjam Frank, Eva Biewald, Deniz Kanber, Dietmar R. Lohmann, and Petra Ketteler. "Introduction of a Variant Classification System for Analysis of Genotype-Phenotype Relationships in Heritable Retinoblastoma." Cancers 13, no. 7 (2021): 1605. http://dx.doi.org/10.3390/cancers13071605.

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Constitutional haploinsufficiency of the RB1 gene causes heritable retinoblastoma, a tumor predisposition syndrome. Patients with heritable retinoblastoma develop multiple retinoblastomas early in childhood and other extraocular tumors later in life. Constitutional pathogenic variants in RB1 are heterogeneous, and a few genotype-phenotype correlations have been described. To identify further genotype-phenotype relationships, we developed the retinoblastoma variant effect classification (REC), which considers each variant’s predicted effects on the common causal mediator, RB1 protein pRB. For v

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Mahony, Simon. "Analysis of Ancient and Medieval Texts and Manuscripts: Digital Approaches." Variants, no. 14 (March 20, 2019): 191–93. http://dx.doi.org/10.4000/variants.778.

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Pagel, Kymberleigh A., Rick Kim, Kyle Moad, et al. "Integrated Informatics Analysis of Cancer-Related Variants." JCO Clinical Cancer Informatics, no. 4 (September 2020): 310–17. http://dx.doi.org/10.1200/cci.19.00132.

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PURPOSE The modern researcher is confronted with hundreds of published methods to interpret genetic variants. There are databases of genes and variants, phenotype-genotype relationships, algorithms that score and rank genes, and in silico variant effect prediction tools. Because variant prioritization is a multifactorial problem, a welcome development in the field has been the emergence of decision support frameworks, which make it easier to integrate multiple resources in an interactive environment. Current decision support frameworks are typically limited by closed proprietary architectures,

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Iqbal, Sumaiya, David Hoksza, Eduardo Pérez-Palma, et al. "MISCAST: MIssense variant to protein StruCture Analysis web SuiTe." Nucleic Acids Research 48, W1 (2020): W132—W139. http://dx.doi.org/10.1093/nar/gkaa361.

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Abstract Human genome sequencing efforts have greatly expanded, and a plethora of missense variants identified both in patients and in the general population is now publicly accessible. Interpretation of the molecular-level effect of missense variants, however, remains challenging and requires a particular investigation of amino acid substitutions in the context of protein structure and function. Answers to questions like ‘Is a variant perturbing a site involved in key macromolecular interactions and/or cellular signaling?’, or ‘Is a variant changing an amino acid located at the protein core o

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Bandyopadhyay, Baishali, Veda Chanda, and Yupeng Wang. "Finding the Sources of Missing Heritability within Rare Variants Through Simulation." Bioinformatics and Biology Insights 11 (January 1, 2017): 117793221773509. http://dx.doi.org/10.1177/1177932217735096.

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Thousands of genome-wide association studies (GWAS) have been conducted to identify the genetic variants associated with complex disorders. However, only a small proportion of phenotypic variances can be explained by the reported variants. Moreover, many GWAS failed to identify genetic variants associated with disorders displaying hereditary features. The “missing heritability” problem can be partly explained by rare variants. We simulated a causality scenario that gestational ages, a quantitative trait that can distinguish preterm (<37 weeks) and term births, were significantly correlated

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Kadam, Ajit, Vinod K.S., Mimansha Patel, et al. "Clinicopathological analysis of histopathological variants of ameloblastoma in Chattisgarh population." Journal of Advanced Medical and Dental Sciences Research 4, no. 4 (2016): 101–4. http://dx.doi.org/10.21276/jamdsr.2016.4.4.22.

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Cameron-Christie, Sophia, Charles J. Wolock, Emily Groopman, et al. "Exome-Based Rare-Variant Analyses in CKD." Journal of the American Society of Nephrology 30, no. 6 (2019): 1109–22. http://dx.doi.org/10.1681/asn.2018090909.

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BackgroundStudies have identified many common genetic associations that influence renal function and all-cause CKD, but these explain only a small fraction of variance in these traits. The contribution of rare variants has not been systematically examined.MethodsWe performed exome sequencing of 3150 individuals, who collectively encompassed diverse CKD subtypes, and 9563 controls. To detect causal genes and evaluate the contribution of rare variants we used collapsing analysis, in which we compared the proportion of cases and controls carrying rare variants per gene.ResultsThe analyses capture

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Xiang, Ruidong, Irene van den Berg, Iona M. MacLeod, et al. "Quantifying the contribution of sequence variants with regulatory and evolutionary significance to 34 bovine complex traits." Proceedings of the National Academy of Sciences 116, no. 39 (2019): 19398–408. http://dx.doi.org/10.1073/pnas.1904159116.

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Many genome variants shaping mammalian phenotype are hypothesized to regulate gene transcription and/or to be under selection. However, most of the evidence to support this hypothesis comes from human studies. Systematic evidence for regulatory and evolutionary signals contributing to complex traits in a different mammalian model is needed. Sequence variants associated with gene expression (expression quantitative trait loci [eQTLs]) and concentration of metabolites (metabolic quantitative trait loci [mQTLs]) and under histone-modification marks in several tissues were discovered from multiomi

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Dissertations / Theses on the topic "Analysis of the variants"

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Boxall, Sally Anne. "Analysis of CD45 variants effecting alternative splicing." Thesis, University College London (University of London), 2005. http://discovery.ucl.ac.uk/1444552/.

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The CD45 (leukocyte common) antigen is a haemopoietic cell specific tyrosine phosphatase essential for antigen receptor signalling in lymphocytes. Multiple isoforms of CD45 are expressed in a cell type and activation-specific manner, but the exact function of the different isoforms remains obscure. In humans, naive T cells express high molecular weight isoforms (containing CD45RA), but following activation switch to expression of low molecular weight (CD45R0 and CD45RB) isoforms. Human CD45 variant alleles which alter CD45 isoform expression have been identified and associated with infectious

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Flanagan, Stephen G. "A genetic analysis of measles virus haemagglutinin variants." Thesis, Queen's University Belfast, 1992. http://ethos.bl.uk/OrderDetails.do?uin=uk.bl.ethos.317503.

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Murat, Katarzyna. "Bioinformatics analysis of epigenetic variants associated with melanoma." Thesis, University of Bradford, 2018. http://hdl.handle.net/10454/17220.

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The field of cancer genomics is currently being enhanced by the power of Epigenome-wide association studies (EWAS). Over the last couple of years comprehensive sequence data sets have been generated, allowing analysis of genome-wide activity in cohorts of different individuals to be increasingly available. Finding associations between epigenetic variation and phenotype is one of the biggest challenges in biomedical research. Laboratories lacking dedicated resources and programming experience require bioinformatics expertise which can be prohibitively costly and time-consuming. To addres

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Adhikari, Kaustubh. "Statistical Methodology for Sequence Analysis." Thesis, Harvard University, 2012. http://dissertations.umi.com/gsas.harvard:10178.

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Rare disease variants are receiving increasing importance in the past few years as the potential cause for many complex diseases, after the common disease variants failed to explain a large part of the missing heritability. With the advancement in sequencing techniques as well as computational capabilities, statistical methodology for analyzing rare variants is now a hot topic, especially in case-control association studies. In this thesis, we initially present two related statistical methodologies designed for case-control studies to predict the number of common and rare variants in a particu

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Zhang, Yue. "Detection copy number variants profile by multiple constrained optimization." HKBU Institutional Repository, 2017. https://repository.hkbu.edu.hk/etd_oa/439.

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Copy number variation, causing by the genome rearrangement, generally refers to the copy numbers increased or decreased of large genome segments whose lengths are more than 1kb. Such copy number variations mainly appeared as the sub-microscopic level of deletion and duplication. Copy number variation is an important component of genome structural variation, and is one of pathogenic factors of human diseases. Next generation sequencing technology is a popular CNV detection method and it has been widely used in various fields of life science research. It possesses the advantages of high throughp

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Olsson, Charlotta. "Quantitative analysis of disease associated mutations and sequence variants." Doctoral thesis, Uppsala : Acta Universitatis Upsaliensis : Univ.-bibl. [distributör], 2001. http://publications.uu.se/theses/91-554-5018-0/.

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Masciangioli, Tina Marie. "Structural and dynamic studies of bacteriorhodopsin and its variants." Diss., Georgia Institute of Technology, 1999. http://hdl.handle.net/1853/30551.

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Lam, Ching-po. "Analysis of LMP-1 variants in EBV related Hodgkin's disease." Click to view the E-thesis via HKUTO, 2003. http://sunzi.lib.hku.hk/hkuto/record/B3197109X.

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林正甫 and Ching-po Lam. "Analysis of LMP-1 variants in EBV related Hodgkin's disease." Thesis, The University of Hong Kong (Pokfulam, Hong Kong), 2003. http://hub.hku.hk/bib/B3197109X.

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Ryman, Katherine Diana. "Molecular analysis of yellow fever virus variants with altered phenotypes." Thesis, University of Surrey, 1995. http://ethos.bl.uk/OrderDetails.do?uin=uk.bl.ethos.260373.

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Books on the topic "Analysis of the variants"

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Translated texts: Properties, variants, evaluations. Howard Fertig, 2004.

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Schweitzer, Marcell. Break-even analyses: Basic model, variants, extensions. Wiley, 1992.

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Skousen, Royal. Analysis of textual variants of the Book of Mormon. Foundation for Ancient Research and Mormon Studies, Brigham Young University, 2004.

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Steiner, Erich. Translated texts: properties, variants, evaluations. Lang, 2004.

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Wedekind, Klaus. Generating narratives: Interrelations of knowledge, text variants, and Cushitic focus strategies. Mouton de Gruyter, 1990.

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Institute of Cost and Management Accountants., ed. Variance analysis. Financial Training, 1986.

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Towards non-Abelian p-adic Hodge theory in the good reduction case. American Mathematical Society, 2011.

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author, Thompson Simon G., ed. Mendelian randomization: Methods for using genetic variants in causal estimation. CRC Press, Taylor & Francis Group, 2015.

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Giri, N. Analysis of Variance. South Asian Publishers, 1986.

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Helmut, Norpoth, ed. Analysis of variance. 2nd ed. Sage Publications, 1987.

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Book chapters on the topic "Analysis of the variants"

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Ritter, Gunter. "Classification and Clustering of Objects With Variants." In Data Analysis. Springer Berlin Heidelberg, 2000. http://dx.doi.org/10.1007/978-3-642-58250-9_4.

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Giron-Sierra, Jose Maria. "Wavelet Variants for 2D Analysis." In Digital Signal Processing with Matlab Examples, Volume 2. Springer Singapore, 2016. http://dx.doi.org/10.1007/978-981-10-2537-2_4.

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Wong, Tuck Seng, and Kang Lan Tee. "Protein Variants Analysis and Characterization." In A Practical Guide to Protein Engineering. Springer International Publishing, 2020. http://dx.doi.org/10.1007/978-3-030-56898-6_10.

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Tachmazidou, Ioanna, and Eleftheria Zeggini. "Meta-Analysis of Rare Variants." In Assessing Rare Variation in Complex Traits. Springer New York, 2015. http://dx.doi.org/10.1007/978-1-4939-2824-8_15.

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Borisov, Oleg V., Melissa Alvarez, James A. Carroll, and Paul W. Brown. "Sequence Variants and Sequence Variant Analysis in Biotherapeutic Proteins." In ACS Symposium Series. American Chemical Society, 2015. http://dx.doi.org/10.1021/bk-2015-1201.ch002.

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Shainoff, J. R. "Analysis of composition of soluble fibrinogen/fibrin complexes by differential ultracentrifugation." In Structural variants and interactions, edited by A. Henschen and B. Henssel. De Gruyter, 1985. http://dx.doi.org/10.1515/9783110855951-011.

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Southan, C., and A. Hensc. "The analysis of fibrinopeptide release from S--carboxymethylated fibrinogen chains using high-performance liquid chromatography." In Structural variants and interactions, edited by A. Henschen and B. Henssel. De Gruyter, 1985. http://dx.doi.org/10.1515/9783110855951-009.

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Singh, Namrata, and Jayati Bhardwaj. "Comparative Analysis for Steganographic LSB Variants." In Advances in Intelligent Systems and Computing. Springer Singapore, 2018. http://dx.doi.org/10.1007/978-981-13-1513-8_84.

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Ling, Zhen, Yiling Xu, Yier Jin, Cliff Zou, and Xinwen Fu. "New Variants of Mirai and Analysis." In Encyclopedia of Wireless Networks. Springer International Publishing, 2020. http://dx.doi.org/10.1007/978-3-319-78262-1_174.

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Ling, Zhen, Yiling Xu, Yier Jin, Cliff Zou, and Xinwen Fu. "New Variants of Mirai and Analysis." In Encyclopedia of Wireless Networks. Springer International Publishing, 2020. http://dx.doi.org/10.1007/978-3-319-32903-1_174-1.

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Conference papers on the topic "Analysis of the variants"

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Hundal, Mahendra. "Product Design Variants and Customization: Dealing With Conflicting Requirements." In ASME 2012 11th Biennial Conference on Engineering Systems Design and Analysis. American Society of Mechanical Engineers, 2012. http://dx.doi.org/10.1115/esda2012-82409.

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Product variety is necessary to satisfy the market. The change from a vendor market to a customer market has led to increased competition among manufacturers, benefiting the customer. Accordingly, less busy market niches are sought and more specific customer wishes are fulfilled. Rapid improvements or design of new products generate new incentives to buy. This market trend increases the variety of product variants while simultaneously leading to smaller number and lot size per variant. An increase in the number of variants and a decrease in the lot size tend to lead to longer throughput and de

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Bujok, Petr. "Enhanced variants of IDE algorithm." In INTERNATIONAL CONFERENCE OF NUMERICAL ANALYSIS AND APPLIED MATHEMATICS (ICNAAM 2016). Author(s), 2017. http://dx.doi.org/10.1063/1.4992239.

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Wei-min, Liu, and Chang Chein-I. "Variants of Principal Components Analysis." In 2007 IEEE International Geoscience and Remote Sensing Symposium. IEEE, 2007. http://dx.doi.org/10.1109/igarss.2007.4422989.

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Agarwal, Ayush, Ashima Yadav, and Dinesh Kumar Vishwakarma. "Multimodal Sentiment Analysis via RNN variants." In 2019 IEEE International Conference on Big Data, Cloud Computing, Data Science & Engineering (BCD). IEEE, 2019. http://dx.doi.org/10.1109/bcd.2019.8885108.

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Al-Hajjaji, Mustafa, Michael Schulze, and Uwe Ryssel. "Similarity analysis of product-line variants." In SPLC '18: 22nd International Systems and Software Product Line Conference. ACM, 2018. http://dx.doi.org/10.1145/3233027.3233044.

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Pande, Amol P., and S. R. Devane. "Study and Analysis of Different TCP Variants." In 2018 Fourth International Conference on Computing Communication Control and Automation (ICCUBEA). IEEE, 2018. http://dx.doi.org/10.1109/iccubea.2018.8697750.

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Merboldt, André, Albert Zeyer, Ralf Schlüter, and Hermann Ney. "An Analysis of Local Monotonic Attention Variants." In Interspeech 2019. ISCA, 2019. http://dx.doi.org/10.21437/interspeech.2019-2879.

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Kansal, Simmi, Tarunpreet Bhatia, and Shivani Goel. "Performance analysis of LEACH and its variants." In 2015 2nd International Conference on Electronics and Communication Systems (ICECS). IEEE, 2015. http://dx.doi.org/10.1109/ecs.2015.7124984.

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Al-Mubaid, Hisham. "Analysis of Gene Variants for Functional Annotations." In 2019 IEEE Conference on Computational Intelligence in Bioinformatics and Computational Biology (CIBCB). IEEE, 2019. http://dx.doi.org/10.1109/cibcb.2019.8791476.

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Ripon, Shamim, Keya Azad, Sk Jahir Hossain, and Mehidee Hassan. "Modeling and analysis of product-line variants." In the 16th International Software Product Line Conference. ACM Press, 2012. http://dx.doi.org/10.1145/2364412.2364417.

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Reports on the topic "Analysis of the variants"

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S.R. Harker, C.R. Vogel, and T. Gedeon. Analysis of Constrained Optimization Variants of the Map-Seeking Circuit Algorithm. Office of Scientific and Technical Information (OSTI), 2005. http://dx.doi.org/10.2172/891009.

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Kachakova, Darina, Orlin Stoyanov, Gyulnas Dzhebir, et al. Association Analysis of RELN and BMP2 Variants with Otosclerosis in Bulgaria. "Prof. Marin Drinov" Publishing House of Bulgarian Academy of Sciences, 2020. http://dx.doi.org/10.7546/crabs.2020.12.15.

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Fan, Beifang, Jianping Ma, Huimin Zhang, et al. Association of FKBP5 gene variants with depression susceptibility: a comprehensive meta-analysis. INPLASY - International Platform of Registered Systematic Review and Meta-analysis Protocols, 2020. http://dx.doi.org/10.37766/inplasy2020.8.0086.

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Nussbaum, Robert L. Functional Analysis of Variants of Unknown Significance in BRCA1 and BRCA2 Using Complementation of a Synthetic Lethal Interaction with PARP Inhibition. Defense Technical Information Center, 2014. http://dx.doi.org/10.21236/ada619698.

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Jia, Ziqi, Jiang Wu, Jiaxin Li, Jiaqi Liu, and Xiang Wang. Meta-analysis of breast cancer risk associated with established germline pathogenic variants in breast cancer-predisposition genes in population-based studies. INPLASY - International Platform of Registered Systematic Review and Meta-analysis Protocols, 2021. http://dx.doi.org/10.37766/inplasy2021.2.0017.

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Dzhangarov, A. I. Multivariate analysis of variance analysis software. Engineering Herald of Don, 2019. http://dx.doi.org/10.18411/0236-8898-1123.

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Dzhangarov, A. I. Multivariate analysis of variance analysis software. Engineering Herald of Don, 2019. http://dx.doi.org/10.18411/0236-8898-1123-2020.

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Goodall, Colin. The Analysis of Averages and the Analysis of Variance. Defense Technical Information Center, 1988. http://dx.doi.org/10.21236/ada198467.

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Taylor, K. E., and C. Covey. Analysis of Variance Including the Diurnal Cycle. Office of Scientific and Technical Information (OSTI), 2018. http://dx.doi.org/10.2172/1460516.

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Ramsey, M. H., M. Thompson, and M. Hale. Objective evaluation of precision requirements for geochemical analysis using analysis of variance. Natural Resources Canada/ESS/Scientific and Technical Publishing Services, 1993. http://dx.doi.org/10.4095/193282.

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