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Relevant bibliographies by topics / Aquatic virology

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Academic literature on the topic 'Aquatic virology'

Author: Grafiati

Published: 4 June 2021

Last updated: 11 February 2022

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Journal articles on the topic "Aquatic virology"

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Nkili-Meyong, Andriniaina Andy, Laurent Bigarré, Ingrid Labouba, Tatiana Vallaeys, Jean-Christophe Avarre, and Nicolas Berthet. "Contribution of Next-Generation Sequencing to Aquatic and Fish Virology." Intervirology 59, no. 5-6 (2016): 285–300. http://dx.doi.org/10.1159/000477808.

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Yau, Sheree, and Mansha Seth-Pasricha. "Viruses of Polar Aquatic Environments." Viruses 11, no. 2 (February 22, 2019): 189. http://dx.doi.org/10.3390/v11020189.

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The poles constitute 14% of the Earth’s biosphere: The aquatic Arctic surrounded by land in the north, and the frozen Antarctic continent surrounded by the Southern Ocean. In spite of an extremely cold climate in addition to varied topographies, the polar aquatic regions are teeming with microbial life. Even in sub-glacial regions, cellular life has adapted to these extreme environments where perhaps there are traces of early microbes on Earth. As grazing by macrofauna is limited in most of these polar regions, viruses are being recognized for their role as important agents of mortality, thereby influencing the biogeochemical cycling of nutrients that, in turn, impact community dynamics at seasonal and spatial scales. Here, we review the viral diversity in aquatic polar regions that has been discovered in the last decade, most of which has been revealed by advances in genomics-enabled technologies, and we reflect on the vast extent of the still-to-be explored polar microbial diversity and its “enigmatic virosphere”.

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Lewis, G. D., M. W. Loutit, and F. J. Austin. "A method for detecting human enteroviruses in aquatic sediments." Journal of Virological Methods 10, no. 2 (February 1985): 153–62. http://dx.doi.org/10.1016/0166-0934(85)90101-6.

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4

Coy, Samantha, Eric Gann, Helena Pound, Steven Short, and Steven Wilhelm. "Viruses of Eukaryotic Algae: Diversity, Methods for Detection, and Future Directions." Viruses 10, no. 9 (September 11, 2018): 487. http://dx.doi.org/10.3390/v10090487.

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The scope for ecological studies of eukaryotic algal viruses has greatly improved with the development of molecular and bioinformatic approaches that do not require algal cultures. Here, we review the history and perceived future opportunities for research on eukaryotic algal viruses. We begin with a summary of the 65 eukaryotic algal viruses that are presently in culture collections, with emphasis on shared evolutionary traits (e.g., conserved core genes) of each known viral type. We then describe how core genes have been used to enable molecular detection of viruses in the environment, ranging from PCR-based amplification to community scale “-omics” approaches. Special attention is given to recent studies that have employed network-analyses of -omics data to predict virus-host relationships, from which a general bioinformatics pipeline is described for this type of approach. Finally, we conclude with acknowledgement of how the field of aquatic virology is adapting to these advances, and highlight the need to properly characterize new virus-host systems that may be isolated using preliminary molecular surveys. Researchers can approach this work using lessons learned from the Chlorella virus system, which is not only the best characterized algal-virus system, but is also responsible for much of the foundation in the field of aquatic virology.

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Sadeghi, Mohammadreza, Yuji Tomaru, and Tero Ahola. "RNA Viruses in Aquatic Unicellular Eukaryotes." Viruses 13, no. 3 (February 25, 2021): 362. http://dx.doi.org/10.3390/v13030362.

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Increasing sequence information indicates that RNA viruses constitute a major fraction of marine virus assemblages. However, only 12 RNA virus species have been described, infecting known host species of marine single-celled eukaryotes. Eight of these use diatoms as hosts, while four are resident in dinoflagellate, raphidophyte, thraustochytrid, or prasinophyte species. Most of these belong to the order Picornavirales, while two are divergent and fall into the families Alvernaviridae and Reoviridae. However, a very recent study has suggested that there is extraordinary diversity in aquatic RNA viromes, describing thousands of viruses, many of which likely use protist hosts. Thus, RNA viruses are expected to play a major ecological role for marine unicellular eukaryotic hosts. In this review, we describe in detail what has to date been discovered concerning viruses with RNA genomes that infect aquatic unicellular eukaryotes.

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6

Novoa, B., S. Nun˜ez, C. Fernández-Puentes, A. J. Figueras, and A. E. Toranzo. "Epizootic study in a turbot farm: bacteriology, virology, parasitology and histology." Aquaculture 107, no. 2-3 (October 1992): 253–58. http://dx.doi.org/10.1016/0044-8486(92)90074-u.

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7

Balmer, Bethany F., Rodman G. Getchell, Rachel L. Powers, Jihye Lee, Tinghu Zhang, Michael E. Jung, Maureen K. Purcell, Kevin Snekvik, and Hector C. Aguilar. "Broad-spectrum antiviral JL122 blocks infection and inhibits transmission of aquatic rhabdoviruses." Virology 525 (December 2018): 143–49. http://dx.doi.org/10.1016/j.virol.2018.09.009.

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8

Wartecki, Adrian, and Piotr Rzymski. "On the Coronaviruses and Their Associations with the Aquatic Environment and Wastewater." Water 12, no. 6 (June 4, 2020): 1598. http://dx.doi.org/10.3390/w12061598.

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The outbreak of Coronavirus Disease 2019 (COVID-19), a severe respiratory disease caused by betacoronavirus SARS-CoV-2, in 2019 that further developed into a pandemic has received an unprecedented response from the scientific community and sparked a general research interest into the biology and ecology of Coronaviridae, a family of positive-sense single-stranded RNA viruses. Aquatic environments, lakes, rivers and ponds, are important habitats for bats and birds, which are hosts for various coronavirus species and strains and which shed viral particles in their feces. It is therefore of high interest to fully explore the role that aquatic environments may play in coronavirus spread, including cross-species transmissions. Besides the respiratory tract, coronaviruses pathogenic to humans can also infect the digestive system and be subsequently defecated. Considering this, it is pivotal to understand whether wastewater can play a role in their dissemination, particularly in areas with poor sanitation. This review provides an overview of the taxonomy, molecular biology, natural reservoirs and pathogenicity of coronaviruses; outlines their potential to survive in aquatic environments and wastewater; and demonstrates their association with aquatic biota, mainly waterfowl. It also calls for further, interdisciplinary research in the field of aquatic virology to explore the potential hotspots of coronaviruses in the aquatic environment and the routes through which they may enter it.

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9

Rastrojo, Alberto, and Antonio Alcamí. "Aquatic viral metagenomics: Lights and shadows." Virus Research 239 (July 2017): 87–96. http://dx.doi.org/10.1016/j.virusres.2016.11.021.

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Chu, D. K. W., C. Y. H. Leung, M. Gilbert, P. H. Joyner, E. M. Ng, T. M. Tse, Y. Guan, J. S. M. Peiris, and L. L. M. Poon. "Avian Coronavirus in Wild Aquatic Birds." Journal of Virology 85, no. 23 (September 28, 2011): 12815–20. http://dx.doi.org/10.1128/jvi.05838-11.

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Books on the topic "Aquatic virology"

1

Jianfang, Gui, ed. Shui sheng bing du xue: Aquatic virology. Beijing Shi: Gao deng jiao yu chu ban she, 2008.

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Book chapters on the topic "Aquatic virology"

1

Kibenge, F. S. B., and M. G. Godoy. "Reoviruses of Aquatic Organisms." In Aquaculture Virology, 205–36. Elsevier, 2016. http://dx.doi.org/10.1016/b978-0-12-801573-5.00014-0.

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Munang’andu, H. M., S. Mutoloki, and Ø. Evensen. "Birnaviruses of Aquatic Organisms." In Aquaculture Virology, 237–50. Elsevier, 2016. http://dx.doi.org/10.1016/b978-0-12-801573-5.00015-2.

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Schütze, H. "Coronaviruses in Aquatic Organisms." In Aquaculture Virology, 327–35. Elsevier, 2016. http://dx.doi.org/10.1016/b978-0-12-801573-5.00020-6.

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Kibenge, F. S. B. "Unclassified and Unassigned Aquatic Animal Viruses." In Aquaculture Virology, 35–48. Elsevier, 2016. http://dx.doi.org/10.1016/b978-0-12-801573-5.00003-6.

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Kibenge, F. S. B., M. G. Godoy, and M. J. T. Kibenge. "Diagnosis of Aquatic Animal Viral Diseases." In Aquaculture Virology, 49–75. Elsevier, 2016. http://dx.doi.org/10.1016/b978-0-12-801573-5.00004-8.

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Kibenge, F. S. B. "Classification and Identification of Aquatic Animal Viruses." In Aquaculture Virology, 9–34. Elsevier, 2016. http://dx.doi.org/10.1016/b978-0-12-801573-5.00002-4.

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