Relevant bibliographies by topics / Archaebacteria

Contents

  1. Journal articles
  2. Dissertations / Theses
  3. Books
  4. Book chapters
  5. Conference papers
  6. Reports

Academic literature on the topic 'Archaebacteria'

Author: Grafiati
Published: 4 June 2021
Last updated: 25 February 2023

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Journal articles on the topic "Archaebacteria"

1

Cammarano, P., O. Tiboni, and A. M. Sanangelantoni. "Phylogenetic conservation of antigenic determinants in archaebacterial elongation factors (Tu proteins)." Canadian Journal of Microbiology 35, no. 1 (January 1, 1989): 2–10. http://dx.doi.org/10.1139/m89-002.

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By using affinity chromatography methods, we have purified elongation factor Tu (EF-Tu) proteins from a host of archaebacteria covering all known divisions in the archaebacterial tree except halophiles, and from such distantly related eubacteria as Thermotoga maritima and Escherichia coli. Polyclonal antibodies were raised against the Tu proteins of Sulfolobus solfataricus, Thermoproteus tenax, Thermococcus celer, Pyrococcus wosei, Archaeoglobus fulgidus, Methanococcus thermolitotrophicus, Thermoplasma acidophilum, and Thermotoga and used to probe the immunochemical relatedness of elongation f
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2

Fedorov, Oleg V., Michael G. Pyatibratov, Alla S. Kostyukova, Natalja K. Osina, and Valery Yu Tarasov. "Protofilament as a structural element of flagella of haloalkalophilic archaebacteria." Canadian Journal of Microbiology 40, no. 1 (January 1, 1994): 45–53. http://dx.doi.org/10.1139/m94-007.

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Flagella of the haloalkalophilic archaebacterium Natronobacterium magadii were purified and characterized. The diameter of the flagella was 10 nm. It was shown that the flagella consist of four major proteins with molecular weights of 105 000, 60 000, 59 000, and 45 000. With decreasing NaCl concentration, the flagella dissociated into protofilaments. The structure of dissociated flagella and individual flagellins was studied by limited proteolysis. It was found that proteolytic cleavage of flagellins in dissociated flagella into high molecular weight fragments (about 40 000) did not lead to p
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3

Amils, R., L. Ramírez, J. L. Sanz, I. Marín, A. G. Pisabarro, and D. Ureña. "The use of functional analysis of the ribosome as a tool to determine archaebacterial phylogeny." Canadian Journal of Microbiology 35, no. 1 (January 1, 1989): 141–47. http://dx.doi.org/10.1139/m89-021.

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Forty different antibiotics with diverse kingdom and functional specificities were used to measure the functional characteristics of the archaebacterial translation apparatus. The resulting inhibitory curves, which are characteristic of the cell-free system analyzed, were transformed into quantitative values that were used to cluster the different archaebacteria analyzed. This cluster resembles the phylogenetic tree generated by 16S rRNA sequence comparisons. These results strongly suggest that functional analysis of an appropriate evolutionary clock, such as the ribosome, is of intrinsic phyl
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Olsen, Gary J., and Carl R. Woese. "A brief note concerning archaebacterial phylogeny." Canadian Journal of Microbiology 35, no. 1 (January 1, 1989): 119–23. http://dx.doi.org/10.1139/m89-018.

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Critical analysis of the recently proposed alternative to the normal archaebacterial tree, the new eocyte tree, shows that the latter's central topology, in which the eubacteria branch from an entirely different section of the unrooted archaebacterial tree than the eukaryotes, is consistent with an artifact. The effects of the alignment used and the particular composition of the sequence quartets analyzed to infer this tree are discussed in detail.Key words: archaebacteria, molecular phylogeny, 16S ribosomal RNA, evolution, eocyte tree.
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Wolters, Jörn, and Volker A. Erdmann. "The structure and evolution of archaebacterial ribosomal RNAs." Canadian Journal of Microbiology 35, no. 1 (January 1, 1989): 43–51. http://dx.doi.org/10.1139/m89-007.

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A cladistic analysis of 553 5S rRNA sequences has revealed a Ur-5S rRNA, the ancestor of all present-day 5S rRNA molecules. Previously stated characteristic differences between the eubacterial and eukaryotic molecules, namely, the length base-pairing schemes of helices D, can be used as a marker for the various archaebacterial branches. One model comprises Thermococcus, Thermoplasma, methanobacteria, and halobacteria; a second comprises the Sulfolobales; and a third is represented only by the single organism Octopus Spring species 1. A relaxed selection pressure on helix E with subsequent dele
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Ramirez, Celia, Lawrence C. Shimmin, C. Hunter Newton, Alastair T. Matheson, and Patrick P. Dennis. "Structure and evolution of the L11, L1, L10, and L12 equivalent ribosomal proteins in eubacteria, archaebacteria, and eucaryotes." Canadian Journal of Microbiology 35, no. 1 (January 1, 1989): 234–44. http://dx.doi.org/10.1139/m89-036.

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The genes corresponding to the L11, L1, L10, and L12 equivalent ribosomal proteins (L11e, L1e, L10e, and L12e) of Escherichia coli have been cloned and sequenced from two widely divergent species of archaebacteria, Halobacterium cutirubrum and Sulfolobus solfataricus, and the L10 and four different L12 genes have been cloned and sequenced from the eucaryote Saccharomyces cerevisiae. Alignments between the deduced amino acid sequences of these proteins and to other available homologous proteins of eubacteria and eucaryotes have been made. The data suggest that the archaebacteria are a distinct
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7

Hensel, Reinhard, Peter Zwickl, Stefan Fabry, Jutta Lang, and Peter Palm. "Sequence comparison of glyceraldehyde-3-phosphate dehydrogenases from the three urkingdoms: evolutionary implication." Canadian Journal of Microbiology 35, no. 1 (January 1, 1989): 81–85. http://dx.doi.org/10.1139/m89-012.

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The primary structure of the glyceraldehyde-3-phosphate dehydrogenase from the archaebacteria shows striking deviation from the known sequences of eubacterial and eukaryotic sequences, despite unequivocal homologies in functionally important regions. Thus, the structural similarity between the eubacterial and eukaryotic enzymes is significantly higher than that between the archaebacterial enzymes and the eubacterial and eukarytic enzymes. This preferred similarity of eubacterial and eukaryotic glyceraldehyde-3-phosphate dehydrogenase structures does not correspond to the phylogenetic distances
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8

Akanni, Wasiu A., Karen Siu-Ting, Christopher J. Creevey, James O. McInerney, Mark Wilkinson, Peter G. Foster, and Davide Pisani. "Horizontal gene flow from Eubacteria to Archaebacteria and what it means for our understanding of eukaryogenesis." Philosophical Transactions of the Royal Society B: Biological Sciences 370, no. 1678 (September 26, 2015): 20140337. http://dx.doi.org/10.1098/rstb.2014.0337.

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The origin of the eukaryotic cell is considered one of the major evolutionary transitions in the history of life. Current evidence strongly supports a scenario of eukaryotic origin in which two prokaryotes, an archaebacterial host and an α -proteobacterium (the free-living ancestor of the mitochondrion), entered a stable symbiotic relationship. The establishment of this relationship was associated with a process of chimerization, whereby a large number of genes from the α-proteobacterial symbiont were transferred to the host nucleus. A general framework allowing the conceptualization of eukary
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9

Zillig, Wolfram, Hans-Peter Klenk, Peter Palm, Gabriela Pühler, Felix Gropp, Roger A. Garrett, and Henrik Leffers. "The phylogenetic relations of DNA-dependent RNA polymerases of archaebacteria, eukaryotes, and eubacteria." Canadian Journal of Microbiology 35, no. 1 (January 1, 1989): 73–80. http://dx.doi.org/10.1139/m89-011.

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Unrooted phylogenetic dendrograms were calculated by two independent methods, parsimony and distance matrix analysis, from an alignment of the derived amino acid sequences of the A and C subunits of the DNA-dependent RNA polymerases of the archaebacteria Sulfolobus acidocaldarius and Halobacterium halobium with 12 corresponding sequences including a further set of archaebacterial A + C subunits, eukaryotic nuclear RNA polymerases, pol I, pol II, and pol III, eubacterial β′ and chloroplast β′ and β″ subunits. They show the archaebacteria as a coherent group in close neighborhood of and sharing
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10

Fewson, Charles A. "Archaebacteria." Biochemical Education 14, no. 3 (July 1986): 103–15. http://dx.doi.org/10.1016/0307-4412(86)90167-6.

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Dissertations / Theses on the topic "Archaebacteria"

1

Stevens, A. F. "Studies on the extremely halophilic archaebacteria." Thesis, University of Leicester, 1985. http://hdl.handle.net/2381/35419.

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A variety of techniques have been employed to study the taxonomic relationships within a large number of extremely halophilic archaebacteria, including both alkaliphilic and neutrophilic isolates. These techniques include a computer-assisted analysis of whole cell and ribosomal protein patterns, after separation by one-dimensional SDS- polyacrylamide gel electrophoresis. The API-ZYM system has been applied to the extreme halophiles to produce, and then compare, the partial enzyme profiles of a large number of strains. The serotaxonomy of the major cell envelope component of the archaebacterial
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Galada, Ncebakazi. "Exploring diversity and ecology of nonarchaea in hydrothermal biotopes." Thesis, University of the Western Cape, 2005. http://etd.uwc.ac.za/index.php?module=etd&amp.

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The Nanoarchaeota were proposed as the fourth archaeal sub-division in 2002, and the only fully characterized nanoarchaeon was found to exist in a symbiotic association with the crenarchaeote, Ignicoccus sp. This nanoarchaeote, named Nanoarchaeum equitans could not be detected with &ldquo<br>universal&rdquo<br>archaeal 16S PCR primers and could only be amplified using specifically designed primers. In order to identify and access a wide diversity of archaeal phylotypes a new set of &ldquo<br>universal&rdquo<br>archaeal primers A571F (5&rsquo<br>-GCY TAA AGS RIC CGT AGC-3&rsquo<br>) and UA1204R
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3

Lin, Xinli. "Isolation and characterization of new pterins from nonmethanogenic archaebacteria." Diss., Virginia Polytechnic Institute and State University, 1987. http://hdl.handle.net/10919/77823.

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Several new pterins have been discovered in halophilic and thermoacidophilic archaebacteria. Two of these were identified in the extreme halophiles and were thus called halopterins. One of these halopterins is produced by Halobacterium salinarium, Halobacterium halobium, and Halococcus morrhuae and is called phosphohalopterin-1. It was given this name because it was the first halopterin discovered and it has four monophosphate esters per dimeric pterin. The proposed structure of phosphohalopterin-1 is as follows. [see document for diagram of chemical structure] The other halopterin, which is
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Brown, James W. "RNA polymerase binding sites and polyadenylated RNAs in archaebacteria /." The Ohio State University, 1988. http://rave.ohiolink.edu/etdc/view?acc_num=osu1487591658174843.

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Giaquinto, Laura School of Biotechnology &amp Biomolecular Science UNSW. "The characterization of Csp (Cold Shock Protein) from the Antarctic archaeon, Methanogenium frigidum." Awarded by:University of New South Wales. School of Biotechnology and Biomolecular Science, 2006. http://handle.unsw.edu.au/1959.4/26148.

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Cold shock proteins (Csp) are small acidic proteins that fold into ??-barrel structures with five anti-parallel ??-strands and are involved in essential cellular processes. Upon temperature downshift the synthesis of Csp proteins is drastically increased to enable cells to restore growth in the cold. These proteins facilitate transcription and translation at low temperature by functioning as RNA chaperones. Csp proteins have been most extensively studied in Bacteria but very few Csp homologues have been identified and studied in Archaea. This is the first study examining structural, functional
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Morozova, Daria. "Tolerance limits and survival potential of methanogenic archaea from Siberian permafrost under extreme living conditions = Toleranzgrenzen und Überlebensstrategien von methanogenen Archaeen aus sibirischen Permafrosthabitaten unter Extrembedingungen /." Bremerhaven : Alfred-Wegener-Institut für Polar- und Meeresforschung, 2007. http://www.loc.gov/catdir/toc/fy0804/2008384365.html.

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Beckler, Gregory Scott. "Structure and analysis of the hisA and hisI genes of the archaebacterium Methanococcus vannielii /." The Ohio State University, 1987. http://rave.ohiolink.edu/etdc/view?acc_num=osu1487330761219015.

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Munro, Stacey. "Investigation of the transcriptional response of Sulfolobus solfataricus to damaging agents." Thesis, St Andrews, 2009. http://hdl.handle.net/10023/743.

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Stewart, John E. B. (John Edward Bakos). "Characterization of Aspartate Transcarbamoylase in the Archaebacterium Methanococcus Jannaschii." Thesis, University of North Texas, 1996. https://digital.library.unt.edu/ark:/67531/metadc935724/.

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Asparate transcarbamoylase catalyzes the first committed step in the de novo synthesis of pyrmidine nucleotides UMP, UDP, UTP, and CTP. The archetype enzyme found in Escherichia coli (310 kDa) exhibits sigmodial substrate binding kinetics with positive control by ATP and negative control with CTP and UTP. The ATCase characterized in this study is from the extreme thermophilic Archaebacterium, Methanococcus jannaschii. The enzyme was very stable at elevated temperatures and possessed activity from 20 degrees Celsius to 90 degrees Celsius. M. Jannaschii ATCase retained 75% of its activity after
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Richards, Jodi Dominique. "Helicases and DNA dependent ATPases of Sulfolobus solfataricus /." St Andrews, 2008. http://hdl.handle.net/10023/474.

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Books on the topic "Archaebacteria"

1

Morris, Kates, Kushner Donn, and Matheson A. T, eds. The Biochemistry of archaea (archaebacteria). Amsterdam: Elsevier, 1993.

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2

J, Danson Michael, Hough D. W, and Lunt George G, eds. The archaebacteria: Biochemistry and biotechnology. London: Portland Press, 1992.

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1920-, Kandler Otto, Zillig Wolfram, and International Workshop on Biology and Biochemistry of Archaebacteria (1985 : Munich, Germany), eds. Archaebacteria '85: Proceedings of the EMBO Workshop on Molecular Genetics of Archaebacteria and the International Workshop on Biology and Biochemistry of Archaebacteria, Munich, June 1985. Stuttgart: Fischer, 1986.

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Morozova, Daria. Tolerance limits and survival potential of methanogenic archaea from Siberian permafrost under extreme living conditions =: Toleranzgrenzen und Überlebensstrategien von methanogenen Archaeen aus sibirischen Permafrosthabitaten unter Extrembedingungen. Bremerhaven: Alfred-Wegener-Institut für Polar- und Meeresforschung, 2007.

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5

Kelly, R. Hyperthermophilic archaebacteria: Prospects for bioprocessing of fossil fuels. S.l: s.n, 1990.

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6

Brierley, J. A. Acidophilic thermophilic archaebacteria--Potential application for metals recovery. S.l: s.n, 1990.

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7

Barker, David. Archaea: Salt-lovers, methane-makers, thermophiles, and other archaeans. New York: Crabtree Pub., 2010.

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Barker, David. Archaea: Salt-lovers, methane-makers, thermophiles, and other archaeans. New York, N.Y: Crabtree Pub. Co., 2010.

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Archaea: Salt-lovers, methane-makers, thermophiles, and other archaea. New York: Crabtree Pub., 2010.

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The third domain: The untold story of archaea and the future of biotechnology. Washington, D.C: Joseph Henry Press, 2007.

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Book chapters on the topic "Archaebacteria"

1

Gooch, Jan W. "Archaebacteria." In Encyclopedic Dictionary of Polymers, 875. New York, NY: Springer New York, 2011. http://dx.doi.org/10.1007/978-1-4419-6247-8_13167.

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Stanier, Roger Y., John L. Ingraham, Mark L. Wheelis, and Page R. Painter. "The Archaebacteria." In General Microbiology, 330–43. London: Macmillan Education UK, 1986. http://dx.doi.org/10.1007/978-1-349-08754-9_14.

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Stanier, Roger Y., John L. Ingraham, Mark L. Wheelis, and Page R. Painter. "The Archaebacteria." In General Microbiology, 330–43. London: Macmillan Education UK, 1986. http://dx.doi.org/10.1007/978-1-349-15028-1_14.

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Javor, Barbara. "Halophilic Archaebacteria." In Brock/Springer Series in Contemporary Bioscience, 101–24. Berlin, Heidelberg: Springer Berlin Heidelberg, 1989. http://dx.doi.org/10.1007/978-3-642-74370-2_7.

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Kandler, Otto. "Archaea Archaebacteria." In Progress in Botany / Fortschritte der Botanik, 1–24. Berlin, Heidelberg: Springer Berlin Heidelberg, 1993. http://dx.doi.org/10.1007/978-3-642-78020-2_1.

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Grant, W. D. "Anaerobic Archaebacteria." In Recent Advances in Anaerobic Bacteriology, 245–48. Dordrecht: Springer Netherlands, 1987. http://dx.doi.org/10.1007/978-94-009-3293-7_21.

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Hori, Hiroshi, Yukio Satow, Isao Inoue, and Mitsuo Chihara. "Archaebacteria Vs Metabacteria." In Evolution of Life, 325–36. Tokyo: Springer Japan, 1991. http://dx.doi.org/10.1007/978-4-431-68302-5_20.

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Zillig, Wolfram, Wolf-Dieter Reiter, Peter Palm, Felix Gropp, Horst Neumann, and Michael Rettenberger. "Viruses of Archaebacteria." In The Bacteriophages, 517–58. Boston, MA: Springer US, 1988. http://dx.doi.org/10.1007/978-1-4684-5424-6_12.

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Miyata, Takashi, Naoyuki Iwabe, Kei-ichi Kuma, Yu-ichi Kawanishi, Masami Hasegawa, Hirohisa Kishino, Yasuo Mukohata, Kunio Ihara, and Syozo Osawa. "Evolution of Archaebacteria: Phylogenetic Relationships Among Archaebacteria, Eubacteria, and Eukaryotes." In Evolution of Life, 337–51. Tokyo: Springer Japan, 1991. http://dx.doi.org/10.1007/978-4-431-68302-5_21.

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Duarte, J. C. "Thermophilic Archaebacteria for Biotechnology." In Recent Advances in Biotechnology, 397–404. Dordrecht: Springer Netherlands, 1992. http://dx.doi.org/10.1007/978-94-011-2468-3_22.

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Conference papers on the topic "Archaebacteria"

1

Abraham, Leo T., and Esha N. Varma. "Extraction Of Methane From Gas Hydrates Using Anaerobic Archaebacteria." In Offshore Technology Conference. Offshore Technology Conference, 2007. http://dx.doi.org/10.4043/18551-ms.

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Chrencik, B. J., and T. L. Marsh. "Contributions of methanogenic Archaebacteria in community-driven anaerobic chromate reduction by Yellowstone National Park hot spring microorganisms." In MICROBES IN APPLIED RESEARCH - Current Advances and Challenges. WORLD SCIENTIFIC, 2012. http://dx.doi.org/10.1142/9789814405041_0012.

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Reports on the topic "Archaebacteria"

1

Jensen, Roy A. Biochemical-Pathway Diversity in Archaebacteria. Fort Belvoir, VA: Defense Technical Information Center, August 1990. http://dx.doi.org/10.21236/ada226200.

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Clark, Douglas S. Pressure-Temperature Effects on Thermophilic Archaebacteria. Fort Belvoir, VA: Defense Technical Information Center, August 1989. http://dx.doi.org/10.21236/ada211241.

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Gupta, Ramesh. Structure and Expression of Various RNAs in the Archaebacteria. Fort Belvoir, VA: Defense Technical Information Center, September 1988. http://dx.doi.org/10.21236/ada204058.

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Gunsalus, Robert P. Genetic Analysis of Hyperthermophilic Archaebacterial Phenomena. Fort Belvoir, VA: Defense Technical Information Center, February 1994. http://dx.doi.org/10.21236/ada286106.

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Daniels, Charles J. Processing of Archaebacterial Intron-Containing tRNA Gene Transcripts. Fort Belvoir, VA: Defense Technical Information Center, July 1988. http://dx.doi.org/10.21236/ada197868.

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Russell, Alan J. Investigation of Pressure Regulation in an Archaebacterial Enzyme. Fort Belvoir, VA: Defense Technical Information Center, March 1994. http://dx.doi.org/10.21236/ada281413.

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Kelly, Robert M. Hydrogen/Sulfur Autotrophy in the Hyperthermophilic Archaebacterium Pyrodictium brockii. Fort Belvoir, VA: Defense Technical Information Center, August 1992. http://dx.doi.org/10.21236/ada254407.

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Zinder, Stephan H. The Nitrogenase in a Methanogenic Archaebacterium and Its Regulation. Fort Belvoir, VA: Defense Technical Information Center, February 1990. http://dx.doi.org/10.21236/ada218346.

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Maier, R. Hydrogen/sulfur metabolism in the hyperthermophilic archaebacterium Pyrodictium brockii. Office of Scientific and Technical Information (OSTI), March 1990. http://dx.doi.org/10.2172/6969524.

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Daniels, C. J. Structure and regulation of an archaebacterial promoter: An in vivo study. Progress report. Office of Scientific and Technical Information (OSTI), December 1993. http://dx.doi.org/10.2172/10169665.

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