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1
Roberts, S. J. "Bacterial diseases of woody ornamental plants." Thesis, University of Leeds, 1985. http://ethos.bl.uk/OrderDetails.do?uin=uk.bl.ethos.375533.
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2
Olfat, Farzad. "Helicobacter pylori : bacterial adhesion and host response." Doctoral thesis, Umeå universitet, Odontologi, 2003. http://urn.kb.se/resolve?urn=urn:nbn:se:umu:diva-133.
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The gastric pathogen Helicobacter pylori infects more than half of the population worldwide. H. pylori manage to establish persistent infection, which would be life-long if not treated. In order to establish such an infection, this pathogen has to deal with the host immune system. H. pylori has certain characteristics which make the bacteria less announced to the host immune system. Additionally, for remaining in the harsh and acidic environment of the stomach with peristaltic movements and a high frequency of turnover of epithelial cells, H. pylori has developed different binding modes to structures present both in the mucus and on the surface of gastric cells and also to extracellular matrix proteins. Evidently, adhesion has a determinant role for a successful colonization by H. pylori. It has been shown that a small fraction of the H. pylori infection is in intimate contact and attached to the host epithelium. Despite its small proportion, this group maintains the persistency of infection. As there is no suitable in vitro system to mimic the human stomach for studies of H. pylori infection, we have developed the In Vitro Explant Culture technique (IVEC). By using this model we could show that H. pylori use the Lewis b blood group antigen to bind to the host gastric mucosa, during experimental conditions most similar to the in vivo situation. Furthermore, we could show that the host tissue responses to the bacterial attachment by expression of Interleukin 8 (IL- ), which will guide the inflammatory processes. Interestingly, by inhibition of bacterial adhesion through receptor competition i.e., by use of soluble Lewis b antigen, IL-8 production was hampered in the IVEC system, which further validates the presence of a tight relation between bacterial adhesion and induction of host immune responses. One of the inflammation signaling cursors in vivo is the upregulated sialylated Lewis x (sLex) antigen, an inflammation associated carbohydrate structure well established as a binding site for the selectin family of adhesion molecules. We could show that during chronic gastric inflammation, which is actually caused by the persistent H. pylori infection, the bacterial cells adapt their binding mode, and preferentially bind to sLex, which will provide an even more intimate contact with the host cells. This interaction is mediated by SabA, the H. pylori adhesin for sialylated oligosaccharides/glycoconjugates. By employing red blood cells as a model we could further demonstrate that SabA is identical to the “established” H. pylori hemagglutinin. We could also show that SabA binds to sialylated glycolipids (gangliosides) rather than glycoproteins on cell surfaces. Our result also revealed that SabA also binds to and activates human neutrophils. Such effect was unrelated to BabA and the H. pylori Neutrophil Activating Protein (HP- AP), which were not directly involved in the activation of neutrophils. Furthermore, phagocytosis of bacteria by neutrophils was demonstrated to be mainly dependent on presence of SabA. Interestingly, HP-NAP showed a possible role in guiding the bacterial adhesion during conditions of limited sialylation, i.e. equivalent to mild gastritis, when the tissue would be less inflamed and sialylated. In conclusion, H. pylori adhesion causes host tissue inflammation, then the bacteria will adapt to the new condition and bind to epithelial cells in a tighter mode by synergistic activities of BabA and SabA. Additionally, SabA bind to and activate human neutrophils, which will exacerbate inflammation responses and cause damage to host tissue. Thus, BabA and SabA are potential candidates to be targeted for therapeutic strategies against H. pylori and gastric disease.
3
Wondimagegne, Eshetu. "Bacterial wilt of potato in Ethiopia." Thesis, University of East Anglia, 1993. http://ethos.bl.uk/OrderDetails.do?uin=uk.bl.ethos.335193.
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Packer, Samantha. "Bacterial-epithelial cell interactions in the periodontal diseases." Thesis, University College London (University of London), 2005. http://discovery.ucl.ac.uk/1445766/.
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Periodontal diseases result from a complex interaction between a biofilm containing commensal and periopathogenic bacteria and the host innate and acquired defense systems. The interaction of oral commensal and pathogenic bacteria and their effect on ' cell behaviour, particularly the synthesis of antibacterial and inflammatory molecules, has been the focus of this project. The messenger RNA (mRNA) and protein expression of human beta-defensin and pro-inflammatory cytokine mRNA in the gingiva of patients suffering from the periodontal diseases was also determined. Patients suffering periodontal diseases showed increased mRNA expression of human beta-defensins and cytokines compared to controls, however, there was no difference in human beta-defensin protein expression between diseased and control tissue samples. Further studies were then carried out to determine the effect of oral commensal and periopathogenic bacteria and their surface components on oral epithelial cells (OECs). An oral squamous carcinoma cell line was found to produce IL-8 protein and express mRNA for human beta-defensin 2 (hpD-2), both of which were induced by several oral bacterial cell surface components, including LPS. The stimulatory effect of LPS was subsequently found to involve the LPS receptor, CD 14. The presence of toll-like receptor mRNA was also demonstrated and results showed that their expression may be regulated by bacteria associated molecular patterns. Both live- and heat-killed oral bacterial pathogens, A. actinomycetemcomitans and P. gingivalis induced production of IL-8 protein and hpD-2 mRNA from OECs. Exposure to the oral commensals S. sanguis and S. gordonii resulted in a decrease in the production of IL-8 mRNA from OECs, whilst heat-killed S. sanguis upregulated hpD-2 mRNA. A highly invasive strain of A. actinomycetemcomitans was shown to adhere to OECs to a greater degree, and also led to a greater induction of hpD-2 mRNA and IL-8 protein compared to a non-invasive strain. Further, isogenic mutants of the oral commensal S. gordonii DL1 Challis, deficient in the production of antigen I/II-family proteins SspA and SspB and the fibrillar cell surface proteins CshA and CshB, showed reduced adhesion to OECs. All strains had comparable effects on IL-8 protein and hpD-2 mRNA expression in OECs. The results presented in this thesis demonstrate the expression profile of human beta- defensins and cytokines in healthy and diseased gingival tissue. hpD-2 has been shown to be upregulated in oral epithelial cells by a range of oral commensal and pathogenic bacteria and their products. It has also been shown that the invasive nature of oral bacteria may contribute to increased expression of hpD-2 messenger RNA in oral epithelial cells. The upregulation of hpD-2 mRNA by a wide variety of components, bacterial or otherwise in oral epithelial cells may have therapeutic potential, however further studies would need to be carried out to determine the correlation between mRNA and protein expression of hpD-2.
5
Teschke, Miriam. "Prävalenz von Arcobacter spp. in Puten- und Schweinefleisch aus dem Berliner Einzelhandel und Vergleich von drei kulturellen Arcobacter-Nachweisverfahren /." Berlin : Mbv, 2008. http://d-nb.info/990056414/04.
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6
Young, Hugh. "Laboratory diagnosis and epidemiology of bacterial sexually transmitted diseases." Thesis, University of Edinburgh, 1997. http://hdl.handle.net/1842/27730.
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This thesis brings together 118 published studies on the microbiology of sexually transmitted diseases resulting from work performed in the University of Edinburgh Department of Medical Microbiology between 1973 and 1995. The main aim of these studies was to improve microbiological aspects of the diagnosis and management of syphilis and gonorrhoea. The earliest publication on syphilis serology was the first to recommend the use of a specific treponemal antigen test, the Treponema pallidum haemagglutination assay (TPHA) for routine screening. As a result of this study a screening schedule comprising the Venereal Diseases Research Laboratory (VDRL) and TPHA tests was introduced into routine practice in late 1973. Soon the same screening schedule was widely adopted in the United Kingdom and Europe. Appreciating the importance of computerised and automation I validated and standardised a prototype commercial enzyme immunoassay (EIA) as a single serological screening test and demonstrated that this gave a performance comparable to screening with the VDRL and TPHA tests while being suitable for automation and electronic report generation. Screening for syphilis by EIA is now becoming widespread throughout Europe. Because false positive EIA reactions may also show reactivity in the FTA-abs test, immunoblotting was evaluated as a confirmatory test. The possibility of syphilis reactivation and loss of treponemal markers in patients co-infected with HIV were also studied.
7
Ndungu, Anne. "Rare genetic variants and susceptibility to severe bacterial diseases." Thesis, University of Oxford, 2015. https://ora.ox.ac.uk/objects/uuid:9c5745f9-50f9-469a-8771-2e49e75db7ac.
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Infectious diseases are a major cause of morbidity and mortality worldwide. Streptococcus pneumoniae and Neisseria meningitidis are major causes of severe bacterial disease which can manifest as invasive disease such as bacteraemia and meningitis. Exposure to these pathogens is relatively widespread, yet only a minority of individuals develop invasive disease. A host genetic component to infectious disease susceptibility has been implied from twin and adoptee studies. A role for rare large effect genetic variants in predisposition to infection has been demonstrated through the study of individuals with primary immunodeficiencies. However, a majority of these studies have been undertaken in individuals with a history of recurrent disease or in multi-case families. The relative role of rare genetic variants of moderate to large effect at the population level has not been widely explored. This thesis presents effort made using next generation sequencing methods to identify rare genetic variants that lead to increased susceptibility to bacterial disease focussing on meningococcal disease, pleural infection(empyema), pneumococcal disease and sepsis phenotypes. Using an exome sequencing approach in 13 cases with invasive meningococcal disease, a novel mutation leading to a complement deficiency and increased risk of meningococcal infection was identified and functionally validated in one individual. This mutation in the CFP gene was demonstrated as leading to impaired properdin secretion. Further analysis implicated loss of function mutations in CD4 and ZAP70 as novel loci for meningococcal disease susceptibility. A case control association analysis for sepsis susceptibility highlighted the possible role for small Rho GTPases in sepsis pathology. By aggregating all rare predicted deleterious mutations in a gene, four genes in this pathway, (ROCK2, ARHGAP18, FYN and CDC42BPG) were implicated as having an excess of rare deleterious variants in sepsis samples compared to population controls. A similar approach identified low frequency genetic variants in the CD109 gene as predisposing to empyema susceptibility in children. Finally, preliminary evidence from adult individuals with invasive pneumococcal disease points to a potential role of the RNASE7 gene in invasive pneumococcal disease susceptibility. This association was primarily due to a predicted deleterious missense mutation present in cases and absent in controls. Taken together, these results have identified a number of potential loci with rare variants associated with susceptibility to severe phenotypes of bacterial diseases.
8
Daranas, Boadella Núria. "Biological control of quarantine bacterial plant diseases with Lactobacillus plantarum strains. Improvement of fitness and monitoring." Doctoral thesis, Universitat de Girona, 2018. http://hdl.handle.net/10803/666181.
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The fruit production is threatened by several bacterial diseases, such as fire blight of apple and pear, bacterial canker of kiwifruit, bacterial spot of stone fruits, and angular leaf spot of strawberry. The conventional pesticides that are available for the control of these diseases are mainly copper compounds and they have a limited efficacy and negative impact on environment. Therefore, there is a need to develop alternative and sustainable management tools. This Ph.D. Thesis contributes to the development of a novel microbial biopesticide based on lactic acid bacteria. Two Lactobacillus plantarum strains were selected due to their broad-spectrum activity. In order to improve the epiphytic survival of both strains in plants and to get more consistency in their biocontrol efficacy, a physiological adaptive strategy was defined to increase the water-stress tolerance. Also, a monitoring method was developed to evaluate the population dynamics of a L. plantarum strain.La producció de fruita està afectada per diferents malalties bacterianes de quarantena com el foc bacterià de les pomeres i pereres, el xancre bacterià del kiwi, la taca bacteriana dels fruiters de pinyol i la taca angular de les fulles de maduixera. Els plaguicides disponibles pel seu control són principalment compostos cúprics els quals tenen una eficàcia limitada i un impacte negatiu en el medi ambient. Existeix la necessitat de desenvolupar eines de control alternatives i més sostenibles. Aquesta tesi contribueix en el desenvolupament d’un bioplaguicida microbià basat en bacteris de l’àcid làctic. Es van seleccionar dues soques de Lactobacillus plantarum amb activitat d’ampli espectre i es va definir una estratègia fisiològica d’adaptació per incrementar la tolerància a l’estrès per manca d’aigua i així millorar la supervivència epifítica a la planta. També es va desenvolupar un mètode de monitoratge per avaluar les dinàmiques poblacionals d’una soca de L. plantarum.
9
Wang, Xiangdong. "Bacterial translocation after major liver resection." Lund : Dept. of Surgery, Lund University, 1993. http://catalog.hathitrust.org/api/volumes/oclc/39793360.html.
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10
Behzad, Kasravi F. "Bacterial translocation in acute liver injury." Lund : Dept. of Surgery, Lund University, 1995. http://books.google.com/books?id=I39sAAAAMAAJ.
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11
Khechara, Martin Peter. "The nematode Caenorhabditis elegans as an alternative model for bacterial infection." Thesis, n.p, 2004. http://ethos.bl.uk/.
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12
Bluvas, Peter J. (Peter Jan) 1979. "Identification of viral and bacterial triggers for human autoimmune diseases." Thesis, Massachusetts Institute of Technology, 2002. http://hdl.handle.net/1721.1/87184.
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Thesis (M.Eng.)--Massachusetts Institute of Technology, Dept. of Electrical Engineering and Computer Science, 2002.Includes bibliographical references (leaf 31).
by Peter J. Bluvas, Jr.
M.Eng.
13
Akiew, E. B. "Potato diseases in South Australia : studies in leafroll, early blight and bacterial wilt /." Title page, contents and summary only, 1985. http://web4.library.adelaide.edu.au/theses/09PH/09pha315.pdf.
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14
Roberts, Daniel Paul. "Molecular mechanisms of pathogenesis incited by Erwinia carotovora subsp. carotovora." Diss., Virginia Polytechnic Institute and State University, 1985. http://hdl.handle.net/10919/71251.
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Erwinia carotovora subsp. Carotovora (Ecc) incites soft-rot on many plants. It is believed that soft-rot is due to the concerted activity of extracellular enzymes. Recombinant DNA techniques were used to study the molecular basis of pathogenesis incited by Ecc. Specifically, a clone library of Ecc strain EC14 DNA in plasmid pBR322 was constructed and transformed into Escherichia coli strain HB101. Some of the E. coli strains that contain these hybrid plasmids produce pectinases or cellulase(s). Plasmid pDR1 contains a 3.4 kilobase (kb) EC14 DNA fragment and mediates the production of endo-pectate lyases with isoelectric points (pI) of 9.5 and 7.5 in strain HB101. The pI 9.5 enzyme is believed to be the major extracellular pectolytic enzyme in soft-rot while the pI 7.5 enzyme has no documented counterpart in EC14. Subclone and transposon tn5 analyses of pDR1 indicate that 1.5 kb is necessary for the production of the pI 9.5 and pI 7.5 enzymes and that these enzymes are produced independently of other EC14 pectate lyase enzymes. Plasmid pDR30 contains a 2.1 kb EC14 DNA insert that mediates the production of an endo-polygalacturonase and an exo-pectate lyase in HB101. The exo-pectate lyase encoded by pDR30 produces an inducer of endo-pectate lyase synthesis as a reaction product. The endo-polygalacturonase encoded by pDR30 is thought to play a role in plant cell wall pectic polymer degradation. Restriction endonuclease and Southern hybrididizatian analyses indicate that the EC14 genes on plasmids pDR1 and pDR30 are not part of the same operon. Escherichia coli strain HB101 containing plasmid pDR1 or plasmid pDR30 is unable to macerate potato tuber slices. However, HB101 containing plasmids pDR1 and pDR30 can cause limited maceration of potato tuber slices. There appears to be a genetic interaction between plasmids pDR1 and pDR30 in maceration of potato tuber tissue. However, the EC14 gene(s) contained on plasmid pDR1 are transcribed independently of the EC14 genes contained on plasmid pDR30. It is possible that transcription of certain pectolytic enzymes independent of other pectolytic enzymes provides a flexible system for plant cell wall pectic polymer degradation.Ph. D.
15
Collins, Ann. "A review and retrospective study of some major bacterial orofacial infections." Thesis, The University of Sydney, 1990. http://hdl.handle.net/2123/4209.
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History has recorded the antiquity of serious infections in the region of the head and neck. Today, our community still experiences major life-threatening infections in these anatomical locations, which pose significant management difficulties to the oral and maxillofacial surgeon. The aim of this thesis is to review the aetiology, diagnosis and treatment of some bacterial infections involving structures of the head and neck. Such infections may spread, causing serious complications with severe morbidity and occasionally death. This theses deals only with infections of bacterial origin and does not attempt to cover viral, or fungal agents or the chronic specific diseases of tuberculosis and syphilis, and makes no attempt to address the old question of focal infection. The literature review relates especially to Ludwig’s Angina which was first described so dramatically in 1836. To this day it remains as a clinically potentially lethal disease despite the progress of modern medicine. Numerous descriptions in the literature warn of the rapid appearance of symptoms and the danger of respiratory obstruction when management of the airway is not satisfactorily undertaken. Both odontogenic and non-odontogenic causes of orofacial and neck infections are reviewed. Odontogenic problems are given special emphasis as they are now of major concern. The significance of the potential fascial spaces in the face and neck which allow the spread of dental infections is also highlighter. A thorough knowledge of these anatomical relationships is still of the utmost importance to the surgeon if he is to be successful in treatment. The principle of surgical drainage of pus is as important in 1990 as it was 150 years ago. The biological basis for the onset and progress of such fulminating infections in the head and neck region is still poorly understood. One constant need is that the bacteria, both aerobic and anaerobic, be correctly identified. Microbiological techniques are constantly improving and provide an important adjuvant investigation, which then allows the surgeon to provide the most appropriate antimicrobial therapy. Principal to the many aspects of treatment is the ability to maintain the airway of the patient and to provide the depth of anaesthesia necessary to undertake the required surgery. Major bacterial orofacial infections may have severe local and far-reaching systemic effects. Such complications are discussed in all their ramifications. It should be realised that the presentation of these patients at a late stage, when complications have already supervened, may make diagnosis difficult. There is always a necessity to ensure that the underlying cause of the disease is accurately defined and that complication are not allowed to progress further. Finally, a retrospective study of the management of 90 patients with major bacterial orofacial infections who have been treated at Westmead Hospital is presented. The outcome of this study of some major bacterial orofacial infections of the head and neck is the need to stress the importance of urgent surgical management and maintenance of the airway, together with the microbiological determination of the causative organisms and their sensitivities, so that other than empirical antibiotics can be instituted early. This must be combined with an upgrading of the patients’ medical and dental status. It was demonstrated that, in the majority of these patients, ignorance and fear combined with a lack of routine dental care resulted in major infections arising from relatively simple odontogenic causes such as dental caries, periodontal disease and pericoronal infection related to impacted teeth. Without doubt, the immediate care of these patients demanded intensive management. However, it is important to recognise that dental education forms an integral part not only of the recovery programme for the afflicted patient, but also as a community health preventive measure of profound significance.
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Collins, Ann. "A review and retrospective study of some major bacterial orofacial infections." University of Sydney, 1990. http://hdl.handle.net/2123/4209.
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Master of Dental SurgeryHistory has recorded the antiquity of serious infections in the region of the head and neck. Today, our community still experiences major life-threatening infections in these anatomical locations, which pose significant management difficulties to the oral and maxillofacial surgeon. The aim of this thesis is to review the aetiology, diagnosis and treatment of some bacterial infections involving structures of the head and neck. Such infections may spread, causing serious complications with severe morbidity and occasionally death. This theses deals only with infections of bacterial origin and does not attempt to cover viral, or fungal agents or the chronic specific diseases of tuberculosis and syphilis, and makes no attempt to address the old question of focal infection. The literature review relates especially to Ludwig’s Angina which was first described so dramatically in 1836. To this day it remains as a clinically potentially lethal disease despite the progress of modern medicine. Numerous descriptions in the literature warn of the rapid appearance of symptoms and the danger of respiratory obstruction when management of the airway is not satisfactorily undertaken. Both odontogenic and non-odontogenic causes of orofacial and neck infections are reviewed. Odontogenic problems are given special emphasis as they are now of major concern. The significance of the potential fascial spaces in the face and neck which allow the spread of dental infections is also highlighter. A thorough knowledge of these anatomical relationships is still of the utmost importance to the surgeon if he is to be successful in treatment. The principle of surgical drainage of pus is as important in 1990 as it was 150 years ago. The biological basis for the onset and progress of such fulminating infections in the head and neck region is still poorly understood. One constant need is that the bacteria, both aerobic and anaerobic, be correctly identified. Microbiological techniques are constantly improving and provide an important adjuvant investigation, which then allows the surgeon to provide the most appropriate antimicrobial therapy. Principal to the many aspects of treatment is the ability to maintain the airway of the patient and to provide the depth of anaesthesia necessary to undertake the required surgery. Major bacterial orofacial infections may have severe local and far-reaching systemic effects. Such complications are discussed in all their ramifications. It should be realised that the presentation of these patients at a late stage, when complications have already supervened, may make diagnosis difficult. There is always a necessity to ensure that the underlying cause of the disease is accurately defined and that complication are not allowed to progress further. Finally, a retrospective study of the management of 90 patients with major bacterial orofacial infections who have been treated at Westmead Hospital is presented. The outcome of this study of some major bacterial orofacial infections of the head and neck is the need to stress the importance of urgent surgical management and maintenance of the airway, together with the microbiological determination of the causative organisms and their sensitivities, so that other than empirical antibiotics can be instituted early. This must be combined with an upgrading of the patients’ medical and dental status. It was demonstrated that, in the majority of these patients, ignorance and fear combined with a lack of routine dental care resulted in major infections arising from relatively simple odontogenic causes such as dental caries, periodontal disease and pericoronal infection related to impacted teeth. Without doubt, the immediate care of these patients demanded intensive management. However, it is important to recognise that dental education forms an integral part not only of the recovery programme for the afflicted patient, but also as a community health preventive measure of profound significance.
17
Abong'o, Benard Omondi. "Prevalence of Escherichia coli O157:H7 in water and meat and meat products and vegetables sold in the Eastern Cape Province of South Africa and its impact on the diarrhoeic conditions of HIV/AIDS patients." Thesis, University of Fort Hare, 2008. http://hdl.handle.net/10353/87.
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Water and food borne Escherichia coli O157:H7 could be one of the pathogens posing high health risk to patients suffering from Acquired Immunodeficiency Syndrome (AIDS) because of its incrimination in diarrhoea cases in AIDS patients. The present study, which was conducted between March 2005 and August 2006, investigated the prevalence of E. coli O157:H7 in water, meat and meat products and vegetables and its impact on diarrhoeic conditions of confirmed and non-confirmed HIV/AIDS patients in the Amathole District in the Eastern Cape Province of South Africa. The water samples used in the study were obtained from stand pipes supplying treated drinking water to communities residing in Fort Beaufort, Alice, Dimbaza and Mdantsane whereas borehole waters were sampled from Ngwenya and Kwasaki. The meat and meat products and vegetable samples were purchased from shops, butcheries, supermarkets and open air markets in Fort Beaufort, Alice and Mdantsane. The stool swabs used in the study were obtained from HIV/AIDS and outpatient clinics at Frere Hospital in East London. A total of 180 each of water, meat and meat products and vegetable samples and another 360 stool samples were analyzed for E. coli O157:H7. Presumptive E. coli O157 was isolated from the samples by culture-based methods and confirmed using Polymerase Chain Reaction techniques. Anti-biogram as well as risk assessment were also carried out using standard methods. The viable counts of presumptive E. coli O157 for water samples ranged between 3.3 × 104 and 1.71 × 105 CFU/ml, and between 1.8 × 104 and 5.04 × 106 CFU/g for meat and meat products, whereas those for vegetables ranged between 1.3 × 103 and 1.6 × 106 CFU/g. The counts of presumptive E. coli O157 for the water and vegetable samples were not significantly different whereas those for meat and meat products were found to be significantly different (P ≤ 0.05). The prevalence rates of presumptive E coli O157 in meat and meat products was 35.55 percent (64/180), and 25.55 percent (46/180) and 21.66 percent (39/180) for water and vegetables respectively. Prevalence of presumptive E. coli O157 in the stool samples of HIV/AIDS patients was 36.39 percent (131/360), of which 56.5 percent (74/131) and 43.5 percent (57/131) were from stools of confirmed and non-confirmed HIV/AIDS patients, respectively. Molecular analysis of representative presumptive E. coli O157 indicated that 10.29 percent (4/39) of vegetables; 14.81 percent (4/27) of water and 38.46 percent (5/13) of meat and meat products carried E. coli O157:H7. Also 36 percent (9/25) and 17.24 percent (5/29) of the stool samples were positive for E. coli O157:H7. Antimicrobial susceptibility profile revealed that all of the E. coli O157:H7 isolated from water, meat and meat products and vegetables as well as those isolated from stools of confirmed and non-confirmed HIV/AIDS patients were resistant (R) to gentamycin and erythromycin. However, 75 percent (20/27) of these isolates were resistant (R) to ampicillin and tetracycline whereas approximately 25 percent (6/27) were resistant (R) to nalidixic acid, ceftriaxone, and chloramphenicol. All the isolates (27/27) were susceptible (S) to amikacin. Probability of risk of E. coli O157:H7 infection was high for confirmed HIV/AIDS patients than for the non-confirmed HIV/AIDS patients. Estimated probability of risk of E. coli O157:H7 due to ingestion of water was 1.00 for 100 confirmed and non-confirmed HIV/AIDS patients. Risk due to meat and meat products was estimated at 0.27 and 0.20 and for vegetables at 0.21 and 0.15 per 100 confirmed and non-confirmed HIV/AIDS patients. The findings of this study predicted a possible link between E. coli O157:H7 isolated from drinking water, meat and meat products and vegetables and diarrhoeic conditions in both confirmed and non-confirmed HIV/AIDS patients, and concludes that confirmed HIV/AIDS patients can be at higher risk of contracting water and food borne E. coli O157:H7 than nonconfirmed HIV/AIDS patients. It is thus recommended that proper water treatment and food handling, maximum food and water safety and sanitation as well as personal body hygiene should be maintained, in order to prevent E. coli O157:H7 infections. Education initiatives and active surveillance of E. coli O157:H7 should be taken by all the stake-holders working directly or indirectly towards ensuring enduring sound public health.
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Thwaites, Richard Mark. "Molecular studies on the variability and basis of pathogenicity of vascular bacterial pathogens of Musa spp." Thesis, Imperial College London, 1999. http://ethos.bl.uk/OrderDetails.do?uin=uk.bl.ethos.325011.
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Stevens, Mumbi. "Bacterial Ghosts Modulation of Innate Immunity: Immune Responses During Chlamydia Infection." DigitalCommons@Robert W. Woodruff Library, Atlanta University Center, 2015. http://digitalcommons.auctr.edu/cauetds/19.
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Chlamydia trachomatis (CT) is a pestilent infection affecting upwards of 90 million people worldwide. An efficacious vaccine is needed to control the morbidities and rising healthcare cost associated with genital CT infection. We have established that protection against chlamydia infection parallels with a high frequency of T helper Type 1 cells and the associated antibodies. The current study focuses on the induction of innate immune responses involved during Chlamydia infection by a Vibrio cholera ghost-based (VCG) vaccine vector. THP-1 cells were used for dose and kinetic experiments. HeLa cells were used for infectivity assays. Based on preliminary studies, we hypothesized that the induction of immune responses by a VCG-based vaccine involves multiple innate immune signaling. Multiplex assay was used to measure T helper Type I and Type II cytokine secretion by THP-1 monocytes (Mn) or macrophages (Mϕ). Immunostimulatory cytokine secretion was significant when both cell morphologies were pulsed with VCG or VCG/murine splenocytes. We concluded that this secretion was significant enough to compliment that which would be secreted when THP-1 cells are pulsed with Chlamydia elementary bodies alone, enhancing the innate immune response during infection. Cellular supernatants (conditioned media) containing Th1-type and Th2-type cytokines were used to culture Chlamydia-infected HeLa cell monolayers. Infected HeLa monolayers cultured in the conditioned media were significantly less infected (968 IFUs) versus HeLa monolayers cultured in Earle’s minimum essential media (16,486 IFUs; p<0.001). We concluded that factors contained in conditioned media prevent and/or significantly reduce infection by Chlamydia and the development of inclusion forming units.
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Pieterse, Renee. "Control of bacterial pathogens associated with mastitis in dairy cows with natural antimicrobial peptides produced by lactic acid bacteria." Thesis, Stellenbosch : Stellenbosch University, 2008. http://hdl.handle.net/10019.1/2323.
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Thesis (MSc (Microbiology))--Stellenbosch University, 2008.Mastitis is considered to be the most costly disease affecting the dairy industry. Management strategies involve the extensive use of antibiotics to treat and prevent this disease. Prophylactic dosages of antibiotics used in mastitis control programmes could select for strains with resistance to antibiotics. In addition, a strong drive towards reducing antibiotic residues in animal food products has lead to research in finding alternative antimicrobial agents. Streptococcus macedonicus ST91KM, isolated from bulgarian goat yoghurt, produces the bacteriocin macedocin ST91KM with a narrow spectrum of activity against Grampositive bacteria. These include mastitis pathogens Streptococcus agalactiae, Streptococcus dysgalactiae, Streptococcus uberis, Staphylococcus aureus and Staphylococcus epidermidis as well as Lactobacillus sakei and Micrococcus varians. Macedocin ST91KM is, according to tricine-SDS PAGE, between 2.0 and 2.5 kDa in size. The activity of macedocin ST91KM remained unchanged after 2 h of incubation at pH 2.0 to 10.0 and 100 min at 100 °C. The peptide was inactivated after 20 min at 121 °C and when treated with pronase, pepsin and trypsin. Treatment with α-amylase had no effect on activity, suggesting that the mode of action does not depend on glycosylation. Precipitation with 60 % saturated ammonium sulphate, followed by Sep-Pak C18 separation recovered 43 % of macedocin ST91KM. Amplification of the genome of strain ST91KM with primers designed from the sequence of the macedocin prescursor gene (mcdA) produced two fragments (approximately 375 and 220 bp) instead of one fragment of 150 bp recorded for macedocin produced by S. macedonicus ACA-DC 198. Strain ACA-DC 198 was not available. However, the DNA fragment amplified from strain LMG 18488 (ACA-DC 206), genetically closely related to strain ACADC 198, revealed 99 % homology to the mcdA of S. macedonicus ACA-DC 198 (accession number DQ835394). Macedocin ST91KM may thus be a related bacteriocin described for S. macedonicus. The peptide adsorbed equally well (66 %) to L. sakei LMG13558 and insensitive cells, e.g. Enterococcus faecalis BFE 1071 and FAIR E92, and Streptococcus caprinus ATCC 700066. Optimal adsorption of macedocin ST91KM was recorded at 37 °C and 45 °C and at pH of 8 - 10. Addition of solvents decreased adsorption by 50%, suggesting that the receptors to which the bacteriocin binds have lipid moieties. The addition of MgCl2, KI and Na2CO3 completely prevented adsorption of macedocin ST91KM to the target cells, possibly due to competitive ion adsorption on the bacterial cell surface. The peptide has a bacteriocidal mode of action, resulting in lysis and the release of DNA and β-galactosidase. Atomic force microscopy of sensitive cells treated with macedocin ST91KM have shown deformation of the cell structure and developing of irregular surface areas. Antimicrobial susceptibility patterns were evaluated against eighteen mastitis pathogens. All isolates tested were resistant to methicillin and oxacillin, but had minimum inhibitory concentrations (MICs) falling in the intermediate and susceptible range against erythromycin. S. agalactiae and S. epidermidis had the highest sensitivity to macedocin ST91KM. A teat seal preparation containing macedocin ST91KM effectively released bacteriocin inhibiting the growth of the bacterial pathogen. Macedocin ST91KM could form the basis for an alternative dry cow therapy to prevent mastitis infections in dairy cows, as it is effective against pathogens that display resistance to conventional antibiotic therapy.
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Swangchan-Uthai, Theerawat. "Molecular response of the endometrium to bacterial infection in dairy cattle." Thesis, Royal Veterinary College (University of London), 2012. http://ethos.bl.uk/OrderDetails.do?uin=uk.bl.ethos.572492.
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Banja, Wakweya Dugassa. "Antibiotic use in two hospitals in West Wollega, Ethiopia." Thesis, Nelson Mandela Metropolitan University, 2010. http://hdl.handle.net/10948/1263.
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In the last decades, there has been an escalating consumption of antibiotics with the number of antibiotic prescriptions increasing worldwide. Overuse or inappropriate use of antibiotics has resulted in a major increase in the development of multi-drug resistant pathogens. Antimicrobial resistance is one of the world’s most serious public health problems with great implication in terms of morbidity, mortality, and costs. To date, there has been no formal antibiotic use study conducted in the West Wollega zone of Ethiopia to assess antibiotic utilization. The objective of this study was to determine the pattern of antibiotic use in two hospitals in the West Wollega zone of Ethiopia, namely Gimbie Adventist Hospital and Nedjo Hospitals, using drug utilization metrics and the costs associated. In addition it was to assess the correlation between diagnosed infectious diseases and antibiotic prescriptions. This study was a cross-sectional, retrospective, descriptive review of antibiotic usage in the two hospitals in the year 2007. Prescriptions dispensed in the first month of each quarter of 2007 were reviewed. The number of prescriptions screened, antibiotic courses started, antibiotic days by specific agent and overall, the cost of individual and all antibiotics, the number and type of infectious diseases diagnosed were collected from which core drug use indicators were calculated. The correlation between infectious disease diagnosed and the antibiotic days prescribed were analyzed. A total of 18568 antibiotic and non-antibiotic prescriptions were reviewed retrospectively in the four months of the study period, 47 percent of which contained at least one antibiotic. The average number of antibiotics per prescription was 1.33 and 1.09 whilst the percentage of injectable antibiotics prescribed was 83.2 percent and 3.76 percent to outpatients and inpatients respectively. Antibiotics prescribed from the Essential Drug List (EDL) and List of Drugs for District Hospital (LDDH) were 63.0 percent, 74.8 percent, and 90.8 percent and 76.1 percent for outpatients and inpatients respectively. 98.6 percent of outpatient and 97.0 percent inpatient prescribed antibiotics were actually dispensed. Penicillins and quinolones were the most prescribed antibiotics in both inpatient and outpatient departments constituting 43.46 percent and 24.08 percent respectively. The antibiotic utilization ratio, incidence of outpatient antibiotic use, incidence of inpatient antibiotic use, the number of Defined Daily Doses (DDD)/1000inhabitants/year and DDD/100 Occupied Bed Days (OBD) for the zone was 0.16, 17.25, 23.56, 158.61, and 70 respectively. Antibiotic cost constituted 33.7 percent of all expenditure on drug, cost of antibiotic per patient care day and cost per antibiotic day was 3.84 Ethiopian Birr (ETB) ($0.40) and 6.29 ETB ($0.66) respectively. The correlation between infectious diseases diagnosed and antibiotic prescription shows significant variation. At outpatient departments alone an average number of antibiotic courses started was 2.7 at Gimbie Adventist Hospital and 7.6 for Nedjo Hospital. When overall antibiotic days prescribed and required was compared in both hospitals, there were 2.4 and 5 times more antibiotic days prescribed than were required for Gimbie and Nedjo Hospitals respectively. This suggests that the overuse of antibiotic is worse in the government hospital (Nedjo Hospital) than in the mission hospital (Gimbie Adventist Hospital). This study suggested that there was overuse of antibiotics in the West Wollega hospitals although further investigation is needed to identify its underlying causes and nature. It is recommended that the health personnel, the hospital management, the zonal and regional Health Bureau, the regulatory bodies and Non-Governmental Organizations (NGOs) work hand-in-hand to promote the rational use of antibiotics in this region so that the consequences and financial cost of antimicrobial resistance can be prevented.
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Thompson, Matthew James. "Predicting serious bacterial infections in children in primary care." Thesis, University of Oxford, 2007. http://ethos.bl.uk/OrderDetails.do?uin=uk.bl.ethos.670104.
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Foster, Jodene. "Characterization of bacterial species in Steinkopf a communal farming area in South Africa: A closer look at pathogenesis." University of the Western Cape, 2019. http://hdl.handle.net/11394/7013.
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Magister Scientiae (Biodiversity and Conservation Biology) - MSc (Biodiv and Cons Biol)The human population in sub-Saharan Africa has been increasing due to decreases in mortality rates and increases in average human age; in turn increasing poverty and pressure placed on agriculture and agricultural production. However, livestock production in South Africa, and globally, is declining due to disease and parasite prevalence, lack of feed, poor breeding, marketing management, change in nutrition in both livestock and humans, rapid urbanization, encroachment on wildlife and unfavourable climatic conditions brought about by global change. One unintended consequence has been the emergence and spread of transboundary animal diseases and, more specifically, the resurgence and emergence of zoonotic disease. Zoonotic diseases are sicknesses transmissible from animals to humans, resulting from direct contact or environmental reservoirs. Previous studies have identified small-scale farmers as the group most prevalent to contracting zoonotic diseases, especially those working in a communal dispensation. Therefore, this study focused on the communal farming area of Steinkopf in the semi-arid Namaqualand region of South Africa. Steinkopf is one of the largest Act 9 areas, with communal land tenure and a mixed farming system, sheep and goats, on about 759 ha. Steinkopf is divided into two rainfall regions, the Succulent Karoo (winter rainfall region) and the Nama Karoo (summer rainfall region). This study aims to identify and characterise the bacterial microbial communities found in the topsoil layer and faecal matter (dung) within the winter and summer rainfall regions of Steinkopf communal rangeland using Next-generation sequencing. Further, the aim is to assess whether pathogenic bacteria are present within the rangeland and what their potential impact on the local farming community might be if present. A high-throughput sequencing technique (Next-generation sequencing) was used to amplify 16S rRNA targeting the V3-V4 hypervariable regions. The phylotypes produced were 37 phyla, 353 families and 634 genera of which the most abundant bacterial phyla were Planctomycetes, Firmicutes and Bacteroidetes and the most abundant genera were Gemmata, Akkermansia and Arthrobacter. Alpha diversity indices showed a variation in species diversity, evenness and richness between soil and dung samples, it shows a higher species richness, evenness and unique OTUs detected in summer soil samples and at natural water holes. Through these analysis soil samples were regarded as superior to dung samples within this particular environment and for this particular study. Natural water holes were identified as a safer option when compared to man-made water holes as there are natural systems in place that combat the spread and growth of harmful bacterial microbes. It was found that seasonality has a great impact on the development and growth of environmental bacterial microbiota and that the current randomness of grazing routes and migrations within the Steinkopf communal rangeland is not a detriment but instead acts as a benefits to environmental and livestock health. Furthermore, a total of three pathogenic bacteria were identified however, they occurred at relatively low abundances. It can thus be concluded that this study thoroughly describes the usefulness of using a high-throughput sequencing technique such as Next-generation sequencing when amplifying a small sample size in order to achieve a large volume of information; and that currently the Steinkopf communal rangeland is not subjected to or at risk of a potential zoonotic threat.
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Nuorala, Emilia. "Molecular palaeopathology : ancient DNA analyses of the bacterial diseases tuberculosis and leprosy /." Stockholm : Archaeological Research Laboratory [Arkeologiska forskningslaboratoriet], Univ, 2004. http://urn.kb.se/resolve?urn=urn:nbn:se:su:diva-231.
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ROSSI, PAOLO. "Bacterial symbiosis in mosquitoes: from basic research to mosquito borne diseases control." Doctoral thesis, Università degli Studi di Camerino, 2011. http://hdl.handle.net/11581/401854.
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Caver, Tony E. "Role of IgG-bound TGF[beta]1 and IAP in modulating neutrophil-mediated host defense against bacterial infection." free to MU campus, to others for purchase, 1996. http://wwwlib.umi.com/cr/mo/fullcit?p9809663.
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Ferreira, Iêda Mendes. "Desenvolvimento de aptâmeros específicos para aplicação como radiofármacos na identificação de bactérias." CNEN - Centro de Desenvolvimento da Tecnologia Nuclear, Belo Horizonte, 2013. http://www.bdtd.cdtn.br//tde_busca/arquivo.php?codArquivo=274.
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A dificuldade na detecção precoce de focos infecciosos específicos causados por bactérias tem aumentado a necessidade de pesquisar novas técnicas para este fim, uma vez que estes focos necessitam de tratamento prolongado com antibióticos e, em alguns casos, até mesmo drenagem ou, se for o caso, a remoção de próteses ou enxertos. A detecção de infecções bacterianas por cintilografia teria a vantagem de uma imagem de corpo inteiro, desde que traçadores específicos estejam disponíveis. Esse estudo visa a obtenção de aptâmeros específicos para identificação de bactérias para uso futuro como radiofármaco. A metodologia SELEX (do inglês Systematic Evolution of Ligands by Exponential Enrichment) pode gerar oligonucleotídeos (aptâmeros) que são capazes de se ligar com alta afinidade e especificidade a alvos específicos, desde pequenas moléculas até proteínas complexas, usando ciclos de enriquecimento e amplificação. Aptâmeros podem ser marcados com diferentes radionuclídeos tais como 99mTc, 18F e 32P. Aptâmeros anti-peptideoglicano, o principal componente da parede celular externa bacteriana, foram obtidos através da SELEX. Células inteiras de Staphylococcus aureus também foram utilizadas para a realização da SELEX para células (cell-SELEX). A seleção dos aptâmeros foi realizada por meio de dois procedimentos distintos. Esses foram o processo A em que foram realizados 15 ciclos da SELEX nos quais a separação dos oligonucleotídeos ligados ao peptideoglicano dos não ligados foi efetuada por filtração e o processo B em que foram realizados 15 ciclos com a separação realizada por centrifugação, seguidos de 5 ciclos de cell-SELEX. A SELEX teve início com um pool de ssDNA (DNA de fita simples). Para o processo A, inicialmente a biblioteca de ssDNA foi incubada com o peptideoglicano e a amplificação dos oligonucleotídeos que foram capazes de se ligar ao peptideoglicano foi realizada por PCR (Polymerase Chain Reaction). Os oligonucleotídeos amplificados foram novamente incubados com o peptideoglicano, amplificados e purificados. Ao fim de 15 ciclos de seleção, os oligonucleotídeos selecionados foram clonados. O produto de recombinação foi utilizado para transformar a bactéria Escherichia coli Top10F. O DNA plasmidial de 40 colônias selecionadas foram extraídos e quantificados. Os plasmídeos foram sequenciados, duas sequências diferentes (Antibac1 e Antibac2) foram obtidas e as estruturas secundárias determinadas. Os aptâmeros obtidos foram sintetizados e marcados com 32P. Os aptâmeros marcados foram incubados com células de S. aureus e a quantidade de ssDNA ligado às bactérias foi determinado por espectrometria de cintilação líquida. A biblioteca de oligonucleotídeos marcada com 32P foi usada como controle. Para o aptâmero Antibac1 a radiação foi 28 vezes maior do que a obtida com o controle e para o aptâmero Antibac2 22 vezes. Um ensaio de especificidade foi conduzido com os aptâmeros marcados utilizando-se células de S. aureus, E.coli, Candida albicans e fibroblastos humanos. Para os dois aptâmeros (Antibac1 e Antibac2) a ligação às células bacterianas foi significativamente superior à verificada para C. albicans e fibroblastos, demonstrando a especificidade dos mesmos para identificação de bactérias. Para o processo B após os 15 ciclos da SELEX foi realizada a cell-SELEX que começou com o produto do 15o ciclo sendo incubado com células de S.aureus. Ao fim de 5 ciclos de seleção, os oligonucleotídeos selecionados foram clonados e sequenciados como no processo A. Onze diferentes sequências foram obtidas de 21 clones e as estruturas secundárias foram determinadas. Os aptâmeros obtidos pelo processo A apresentaram alta afinidade e especificidade para bactérias. Os aptâmeros obtidos pelo processo B serão avaliados quanto a estes parâmetros em trabalhos futuros.The difficulty in early detection of specific foci caused by bacteria in the bacterial infection has raised the need to search for new techniques for this purpose, since these foci require prolonged treatment with antibiotics and in some cases even drainage or, if applicable, removal of prostheses or grafts. Detection of bacterial infections by scintigraphy had the advantage that a whole body image could be obtained, since specific tracers were available. This study aims to obtain aptamers specific for bacteria identification for future use as radiopharmaceutical. The SELEX (Systematic Evolution of Ligands by Exponential Enrichment) methodology can generate oligonucleotides (aptamers) that are able to bind with high affinity and specificity to a specific target, from small molecules to complex proteins, by using rounds of enrichment and amplification. Aptamers can be labeled with different radionucleotides such as 99mTc, 18F and 32P. In this study, aptamers anti-peptidoglycan, the main component of the bacterial outer cell wall, were obtained through SELEX. Whole cells of Staphylococcus aureus were also used to perform the SELEX to cells (cell-SELEX). The selection of aptamers was performed by two different procedures (A and B). The A process has been accomplished by 15 SELEX rounds in which the separation of the oligonucleotides bound to the peptidoglycan of unbound ones was performed by filtration. In the B process 15 SELEX rounds were performed using the centrifugation for this separation, followed by 5 rounds cell-SELEX. The SELEX started with a pool of ssDNA (single stranded DNA). For A process, initially a library of ssDNA was incubated with peptidoglycan and the amplification of oligonucelotides that were able to bind to peptidoglycan was performed by PCR (Polymerase Chain Reation). The amplified oligonucleotides were again incubated with peptidoglycan, amplified and purified. At the end of 15 selection rounds the selected oligonucleotides were cloned. The product of recombination was used to transform Escherichia coli Top10F. The plasmid DNA from 40 selected colonies were extracted and quantified. The plasmids were sequenced, two different sequences (Antibac1 and Antibac2) were obtained and their secondary structures determined. The aptamers obtained were synthesized and labeled with 32P. The labeled aptamers were incubated with S. aureus cells and the amount of radiolabeled ssDNA was determined by liquid scintillation spectrometry.
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Dixit, Sameer M. "Antagonistic activity of probiotic bacteria based on bacterial diversity in the porcine gut." Thesis, View thesis, 2004. http://handle.uws.edu.au:8081/1959.7/35614.
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Diversity analysis of Escherichia coli have routinely utilised isolates obtained by culture of faeces on MacConkey selective media, under the assumption that the diversity identified in faecal isolates are representative of similar diversity in E. coli in the gastrointestinal tract (GIT). This study has addressed this important issue by specifically isolating E. coli from different regions of the gut in pigs and subjecting them to enzymatic multilocus enzyme electrophoresis (MLEE) and molecular virulence factor (VF) analysis to ascertain whether E. coli populations inhabiting different regions of the gut are different from each other. Combination of these results showed that on average, E. coli strains isolated from the upper GIT region (small intestine) of the pig are distinctly different from the E. coli strains isolated from the lower GIT region (large intestine). An important aspect of the finding that faecal E. coli are not truly representative of the diversity in the GIT is the mechanism used by specific clonotypes that have adapted to different geographical habitats to survive challenge from incoming strains.
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Verkasalo, Erkki I. "Relationship of bacterial infection and stress wave travel time in red oak lumber." Thesis, This resource online, 1991. http://scholar.lib.vt.edu/theses/available/etd-10312009-020145/.
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Dube, Callote. "Prevalence and risk factors for Helicobacter pylori transmission in the Eastern Cape Province application of immunological molecular and demographic methods." Thesis, University of Fort Hare, 2010. http://hdl.handle.net/10353/265.
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Helicobacter pylori (H. pylori) is a microaerophilic, Gram-negative motile curved rod that inhabits the gastric mucosa of the human stomach. The organism chronically infects billions of people worldwide and is one of the most genetically diverse of bacterial species. Infection with the organism potentially induces chronic gastritis and peptic ulcer disease. In addition, H. pylori plays a role in the etiology of gastric cancer and gastric MALT lymphoma. The risk of infection is increased in those living in the developing world, which has been ascribed to precarious hygiene standards, crowded households, and deficient sanitation common in this part of the world. Thus, the aim of this study was to identify the risk factors in the transmission of H. pylori in our environment, i.e. in Nkonkobe Municipality in the Eastern Cape Province, South Africa. Faecal samples were collected from 356 apparently healthy subjects, consisting of 168 males and 188 females aged from 3 months to 60 years (Mean = 31 years). A standardized questionnaire was applied, it described demographic characteristics including age, sex, household hygiene, socioeconomic status, area of residence, duration of stay in the area, sharing bath water, sharing tooth brush, habit of sucking thumb, medication currently being taken or medication taken within the past three months, source of water, type of toilet used, education and occupation. A sandwich-type enzyme immunoassay amplification technology (Amplified IDEIA TM Hp StAR TM , Oxoid, UK) was used to analyze the faecal samples for the detection of H. pylori antigens using monoclonal antibodies specific for H. pylori antigens. To assess the possibility of faecal oral route with tap water as an intermediary link, PCR targeting the ureC (glmM), a highly conserved gene in H. pylori ii was carried out to detect H. pylori DNA in faecal samples of already positive samples by HpSA test as well as in direct tap water used by the H. pylori positive subjects. QIAamp DNA stool mini kit was used to extract DNA from faecal samples. Tap water samples were then obtained using sterile bottles from areas inhabited by H. pylori positive subjects as determined by HpSA test and PCR. DNA extraction from water samples was done using UltraCleanTM Water DNA Isolation Kit (0.22μm) according to the manufacturer’s instructions. PCR with primers specific for H. pylori glmM gene was carried out with both positive and negative controls incorporated. Fisher’s exact test was used to assess the univariate association between H. pylori infection and the possible risk factors. Odds ratio (OR) and the corresponding 95 percent confidence interval (CI) were calculated to measure the strength of association using EPI INFO 3.41 package. P values of < .05 were required for significance. The precision rate of the diagnostic tests used was also determined. H. pylori antigen was detected in 316 of the 356 subjects giving an overall prevalence of 88.8 percent. Prevalence increased with age from 75.9 percent in children < 12 years age to 100 percent in the age group from 13 years to 24 years, also 100 percent prevalence of H. pylori was recorded in young adults aged 25-47 years and subjects aged 60 years (P < .05). H. pylori prevalence was higher in females than in males. Of 188 females who participated in the study, H. pylori antigen was detected in 172 (91.5 percent) versus 144 (85.7 percent) of 168 males (P > .05). Interestingly, H pylori antigen was detected more often (100 percent) in the high socioeconomic group than in those of low socioeconomic group (85.9 percent). Sixteen (66.7 percent) of twenty four faecal samples that had previously tested positive for the organism by HpSA test were confirmed positive by PCR. However none of the treated tap water samples tested positive for the organism by PCR. The present iii study revealed a high prevalence of H. pylori in faecal samples of asymptomatic individuals in the Nkonkobe Municipality, an indication of active infection. The obtained results also revealed that direct treated tap water might not be playing a crucial role in the oral transmission of H. pylori in the studied population.
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Simmons, Carla Stull. "Influence of copper on resistance of Lumbricus terrestris to bacterial challenge." Thesis, University of North Texas, 2000. https://digital.library.unt.edu/ark:/67531/metadc2602/.
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Earthworms, Lumbricus terrestris, were challenged orally and intracoelomically with two bacterial species, Aeromonas hydrophila and Pseudomonas aeruginosa, and mortality rates were observed. Neither were found to be particularly pathogenic at injected doses of up to 108 bacteria per earthworm. The influence of Cu++ (as CuSO4) on the earthworm's response to bacterial challenge was investigated by exposing earthworms to sublethal levels of Cu++ prior to bacterial challenge. Exposure at sublethal concentrations up to 3 m g/cm2 did not have a pronounced influence on host resistance to challenge as measured by earthworm mortality. Cu++ increased the earthworm's ability to agglutinate rabbit erythrocytes, indicating that Cu++ exposure caused coelomocyte death, autolysis and release of agglutinins into the coelom, possibly explaining resistance to bacterial challenge.
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Prapaiwong, Naparat Arias Covadonga R. "Study of bacterial flora in Eastern oyster (Crassostrea virginica) treat with high pressure." Auburn, Ala, 2008. http://hdl.handle.net/10415/1522.
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Lewis, Sally O'Donovan Gerard A. "Development of a real-time PCR assay for the detection of Campylobacter jejuni and Campylobacter coli." [Denton, Tex.] : University of North Texas, 2009. http://digital.library.unt.edu/permalink/meta-dc-9840.
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Montoya, Vincent Keith. "Metagenomic analyses of two female genital tract diseases : bacterial vaginosis and ovarian cancer." Thesis, University of British Columbia, 2013. http://hdl.handle.net/2429/44333.
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Metagenomics is a rapidly evolving field that has facilitated the expansion of microbiology into new areas of human and environmental health. Metagenomic studies have expanded the phylogenetic tree of life by increasing taxonomic resolution in individual phyla as well as adding entirely new branches of life. This revolution in microbiology has been made possible by the introduction of second-generation high-throughput sequencing, the associated methods for preparing DNA sequencing libraries, as well as new bioinformatic algorithms for analyzing these new types of data. Because of the novelty of these methods, very few have been systematically tested for their sensitivities and specificities outside of the initial development process. As the interpretation of metagenomic studies utilizing these tools depends greatly upon their efficiencies in both detection and classification, it is essential to best determine the performance of each tool. In this study, a variety of novel techniques were utilized and tested in their abilities to characterize the microbial populations in two regions of the female genital tract: ovarian cancer tissue and the vaginal microbiome. Although a diverse microbial population was initially observed in the transcriptome sequence data for ovarian cancer using next generation sequencing, we were unable to recover these microbial sequences through PCR and Sanger sequencing approaches. Optimized methods were applied to healthy vaginal microbiome samples and tested for their ability to differentiate them from a polymicrobial disease of the vagina, bacterial vaginosis. In addition to a high correlation between a microbial scoring system for bacterial vaginosis, this novel metagenomic pipeline also revealed microorganisms not yet associated with the vaginal microbiome such as specific Bifidobacteria spp., various bacteriophage, and Debaryomyces. Collectively, both of these studies provide unique insights into each disease as well as illustrate both the limitations and potential of the rapidly growing field of metagenomics.
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Peng, Zhao. "Contribution of TAL effectors in Xanthomonas to diseases of rice and wheat." Diss., Kansas State University, 2015. http://hdl.handle.net/2097/20443.
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Doctor of PhilosophyPlant Pathology
Frank F. White
Rice and wheat are two major crops that suffer losses from the diseases of bacterial blight and bacterial leaf streak, which are caused by Xanthomonas oryzae pv. oryzae (Xoo) and Xanthomonas translucens pv. undulosa (Xtu), respectively. Transcriptional-Activator Like (TAL) effectors, a special family of type III effector proteins from Xanthomonas, have been demonstrated as critical virulence factors that act by inducing corresponding susceptibility (S) genes in several disease complexes of plants. In this study, I analyzed the contributions of TAL effectors from Xoo and Xtu to virulence and in modulating host gene expression to enhance susceptibility. Specifically, the TalC effector from the African Xoo strain AXO1947 was identified as a critical virulence factor, which functions by promoting expression of the gene OsSWEET14 in rice. TalC is interchangeable with other major TAL effectors from Asian strains of Xoo on the basis of functional complementation. The TAL effector PthXo2 from the Asian Xoo strain JXO1 is a major virulence factor and contains 21.5 repeats in the central repetitive region that targets OsSWEET13 in indica rice varieties but not in japonica rice varieties. A one repeat deletion in the PthXo2 effector enabled effector specificity to switch from indica rice to japonica rice. TAL effector genes from a genomic analysis of the Xtu strain XT4699 and related strains were characterized with regards to their involvement in virulence and the modulation of host gene expression in the Chinese Spring wheat cultivar. The identification of TAL effectors with virulence contributions and their target S genes is important for understanding the virulence mechanisms of Xanthomonas bacteria and promises to provide new strategies for disease control.
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Cole, Jason Nicklaus. "Characterisation of cell wall proteins, virulence factor maturation and invasive disease trigger of Group A streptococcus." Access electronically, 2006. http://www.library.uow.edu.au/adt-NWU/public/adt-NWU20070130.144214/index.html.
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Hulbig, Veronica A. "Developing a Model for Bacterial Kidney Disease in the Zebrafish, Danio rerio." Fogler Library, University of Maine, 2010. http://www.library.umaine.edu/theses/pdf/HulbigVA2010.pdf.
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Al-Ghabshi, Alya. "Bacteria recovered from aquaculture in Oman, with emphasis on Aeromonas Spp." Thesis, University of Stirling, 2015. http://hdl.handle.net/1893/22154.
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Aquaculture is being seriously considered as a promising sustainable industry in the Sultanate of Oman. Fish farming commenced in Oman in 1986, but it was only in 2011 that it became a more commercially driven sector. While worldwide aquaculture production is expected to rise to meet the shortage in capture fisheries, there is a parallel requirement to identify potential threats to the health and welfare of existing aquatic farmed stocks and to take appropriate steps to mitigate them. As aquaculture in Oman is in an early stage of development, it is important to acquire baseline data on the existence and prevalence of aquatic diseases and pathogens to help the Government make policy decisions to develop health management regimes applicable for Omani aquaculture. Therefore, this study was conducted to evaluate current farming practices of tilapia in Oman, to investigate the bacterial species composition and distribution from different sites in some of the economically important fish species, and to study the characteristics and pathogenicity of Aeromonas species. The current practices were studied for 9 Nile tilapia (Oreochromis niloticus) farms from four areas (Al Batinah, Ad Dhahirah, Ad Dakhiliyah and Ash Sharqiyah North) during the period of September to November 2012 by using questionnaires and interviews with the farm owners and staff. In total 417 fish representing 5 target species were chosen on the basis of the commercial importance and their potential for aquaculture in Oman, including red spot emperor (Lethrinus lentjan), king soldier bream (Argyrops spinifer), white spotted rabbit fish (Siganus canaliculatus), abalone (Haliotis mariae) and tilapia (Oreochromis niloticus). The fish were collected from 5 main sampling areas in Oman (Muscat, Mudhaibi, Manah, Sohar and Salalah) based on the Atlas of suitable sites for aquaculture in Oman to investigate the bacterial species composition and distribution. The animals were examined for clinical signs of disease prior to routine bacteriology. Bacterial isolates were recovered using traditional methods and identified to species level using phenotypic and molecular approaches using 16S rDNA, 16S rDNA RFLP and 16S rDNA sequencing. Experimental fish challenge studies were also conducted using both live bacterial cells and ECP protein to investigate the pathogenicity of Aeromonas isolates. In addition, the presence of some virulence factors was investigated using both phenotypic and genotypic methods. The results of this study showed that, the most farms in the Oman follow very similar farming practices. The major proportion of the tilapia is consumed within the local communities. A number of farmers have experienced mortalities, which were considered to be attributable to poor water quality, overcrowding or due to excessive feeding. Farmers facing fish mortalities tended not to record the problems due to a lack of understanding of the concept of fish farm management. There is a regulation about aquaculture and related quality control, but it has not yet been implemented in an appropriate manner in Oman. From the diverse group of bacteria recovered from wild and farmed fish, 83% of the total isolates comprised Gram negative, rod-shaped bacteria. The most frequently isolated groups from marine and cultured fish were Aeromonas spp., Vibrio spp., Sphingobacterium spp., Micrococcus spp. and Staphylococcus spp., with Aeromonas spp. being the predominant group representing 25% of the isolates recovered in this study. Identification of the Aeromonas spp. showed 57% agreement between the results of phenotypic and genotypic methodologies, and determined 6 species as the dominant organisms, i.e. A. veronii, A. jandaei, A. caviae, A. trota, A. encheleia and A. salmonicida. 65% of the iso-lates shared 99% 16S rDNA sequence similarity with the closest sequences in GenBank, and the dominant species was A. veronii. In conclusion, the Aeromonas isolates recovered from fish with clinical signs of disease showed heterogeneity in their identification profiles and their pathogenicity.
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Pieterse, Reneé. "Control of bacterial pathogens associated with mastitis in dairy cows with natural antimicrobial peptides produced by lactic acid bacteria /." Link to the online version, 2008. http://hdl.handle.net/10019/891.
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Baelo, Álvarez Aida. "New antimicrobial strategies against bacterial infections." Doctoral thesis, Universitat de Barcelona, 2021. http://hdl.handle.net/10803/673587.
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Bacterial infections are a major health concern worldwide due to the mortality and comorbidity associated levels. Besides the development of drug-resistance mechanisms, most recalcitrant infections are caused by bacteria forming biofilms, which are bacterial communities that grow within an extracellular polymeric substance (EPS) matrix that protects bacterial cells from the action of antimicrobials and immune mechanisms. The frequent appearance and spreading of bacterial drug-resistant strains, together with the recalcitrance of infections caused by biofilms, has pointed out the urgent need to develop novel antibacterial agents that target essential bacterial processes and biofilm-forming bacteria. This thesis investigated the development of new antibacterial strategies by both targeting bacterial essential processes and biofilm-forming bacteria. Ribonucleotide reductase (RNR) are essential enzymes required by any cellular organism, since they catalyze the synthesis of deoxyribonucleotides, critical for both DNA synthesis and repair processes. Due to its key role in DNA replication, several RNR inhibitors have been developed as antiproliferative drugs in cancer and infectious diseases. Amongst RNR inhibitors, radical scavenger molecules have proved for long its inhibitory activity against the RNR enzyme, including some cytotoxic hydroxylamine derivatives such as hydroxyurea (HU). Here, the use of hydroxylamine derivative compounds as antibacterial agents specifically targeting the bacterial RNR enzyme was investigated. The results provided show that N-methyl-hydroxylamine (M-HA) molecule and some newly synthesized Nhydroxylamine derivative molecules (N-HA) inhibit bacterial RNR, displaying a wide range of antibacterial activity against different bacterial pathogens, together with low cytotoxicity to eukaryotic cells. Also, M-HA molecule shows intracellular antimycobacterial activity during macrophages infection, together with Pseudomonas aeruginosa in vitro antibiofilm activity. Several of the N-HA molecules display antibiofilm activity against P. aeruginosa, Staphylococcus aureus, and Escherichia coli biofilms, and we demonstrate the ability of such molecules to inhibit bacterial growth by radical scavenging of the RNR enzyme. Further, this thesis explores the use of a drug delivery system based on poly(lactic-co-glycolic) (PLGA) nanoparticles (NPs) to remove P. aeruginosa biofilms by combining the action of the antibiotic ciprofloxacin and the DNA-hydrolytic activity of the deoxyribonuclease I enzyme (DNase I). The synthesized biodegradable PLGA NPs, loaded with ciprofloxacin and functionalized with DNase I through poly(lysine) (PL) coating, synergistically improve the ciprofloxacin antibacterial efficacy by disassembling the extracellular DNA, one of the main components of the EPS matrix.
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PRATES, RENATO A. "Verde malaquita como fotossensibilizador em terapia fotodinâmica: ação bactericida sobre actinobacillus actinomycetemcomitans - Um estudo in-vitro." reponame:Repositório Institucional do IPEN, 2005. http://repositorio.ipen.br:8080/xmlui/handle/123456789/11259.
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Dissertacao (Mestrado Profissionalizante em Lasers em Odontologia)
IPEN/D-MPLO
Instituto de Pesquisas Energeticas e Nucleares - IPEN/CNEN-SP; Faculdade de Odontologia - USP
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Leung, Ka-ming, and 梁家銘. "Isolation, identification and establishment of bacterial culture collection of fish pathogens in Hong Kong." Thesis, The University of Hong Kong (Pokfulam, Hong Kong), 2014. http://hdl.handle.net/10722/207649.
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The importance of fish culture has been increasing since 1990’s. The steady growth of fish culture helps to ensure a stable supply of fish for human consumption. However, when compared with capture fisheries, production from fish culture is greatly influenced by fish diseases. Outbreaks of fish diseases have caused great economic loss to fish culture. Research has been conducted to understand and reduce the occurrence of fish diseases in fish culture. In Hong Kong, bacterial infection is the most common cause of fish diseases. This project is therefore directed to isolate and identify the causative bacterial pathogen of some fish disease cases with the aim of setting up a local fish disease database for assisting the identification of diseases and improving the understanding of fish diseases in fish farms in Hong Kong. In this project, seven fish disease cases caused by bacteria were investigated with the AFCD officials in Hong Kong. Nine fish disease bacterial pathogens were isolated and identified using different methods (including commercial biochemical test kits, automated system and DNA sequencing). The bacteria identified included Aeromonas hydrophila, Lactococcus garvieae, Streptococcus agalactiae, Streptococcus dysgalactiae, Streptococcus iniae, Vibrio vulnificus and Aeromonas salmonicida. Sensitivity tests to 10 common antibiotics conducted for the identified bacteria showed that spectinomycin is the most broad spectrum antibiotics. In addition, a long-term physical storage of bacterial stock with glycerol and glass beads was established for further research of the identified bacteria. For efficient data analysis, an electronic database using Microsoft Access to hold the identification results and case history of each isolated bacteria was developed. Different data entry forms and reports were also constructed to facilitate easy data entry and data access for users. The three bacteria identification methods were compared for their efficiency and accuracy. Some limitations encountered in this project including time constraints and low accuracy of some biochemical identification tests were discussed and recommendations to overcome these limitations and improvements to the constructed database were made.published_or_final_version
Environmental Management
Master
Master of Science in Environmental Management
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Tujulin, Eva. "Host interactions of the intracellular bacterium Coxiella burnetii : internalisation, induction of bacterial proteins and host response upon infection /." Uppsala : Swedish Univ. of Agricultural Sciences (Sveriges lantbruksuniv.), 1999. http://epsilon.slu.se/avh/1999/91-576-5425-5.pdf.
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Masson, Guido Carlos Iselda Hermans [UNESP]. "Staphylococcus aureus na cadeia produtiva de suínos e perfil de resistência a antimicrobianos." Universidade Estadual Paulista (UNESP), 2011. http://hdl.handle.net/11449/101216.
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masson_gcih_dr_jabo.pdf: 739097 bytes, checksum: 2fef2cb4d684c81bde182928eafa28f3 (MD5)Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)
S. aureus é responsabilizado por diversos problemas clínicos em suinocultura e em humanos. Estudos epidemiológicos comprovam o potencial deste microrganismo em adquirir resistência a antibióticos. Atualmente estirpes resistentes a meticilina (MRSA), responsabilizados por casos de infecções nosocomiais, são as mais estudadas uma vez que o MRSA encontra-se disseminado em ambientes extra-hospitalares e frenquentemente tem sido isolado de vários animais domésticos inclusive suínos. O objetivo desde trabalho foi determinar a presença de S. aureus em granjas de suínos, identificar a ocorrência dos genes mecA, icaA e icaD e o perfil de resistência a antimicrobianos. Ao todo foram colhidas 458 amostras de cinco granjas e dois frigoríficos. As amostras foram semeadas em ágar Braid - Parker e ágar sangue seguido de provas bioquímicas. As amostras sugestivas, foram submetidas a PCR para confirmação de espécie, detecção do gene coa, mecA para avaliar a resistência a meticilina além dos genes de virulência icaA e icaD que expressam capacidade para formação de biofilmes. Na sequência, realizou-se o antibiograma para a avaliação de 11 antimicrobianos. Ao todo foram identificados 81 (79%) S. aureus isolados de todas as granjas e frigoríficos incluindo, três amostras isoladas de funcionários das granjas. Nenhuma amostra foi positiva para o gene mecA. Em relação aos genes icaA e icaD, observou predomínio do gene icaD e que 41% das amostras foram positivas para os dois genes. O antibiograma demonstrou grande resistência às penicilinas e tetraciclinas, além de grande quantidade de S aureus multirresistentes
Staphylococcus aureus are involved in a wide range of clinical problems to swine industry as son in humans. Epidemiological researchs prove his potential to acquire resistantence to antibiotics. Nowadays, methicillin-resistant S. aureus (MRSA) are responsabilized for nosocomial infections and many studies are done because MRSA are spread to extra hospitalar enrivonment and frequentely isolated from domestic animals including pigs. The aim of this study was to determine the presence o S. aureus at swine farms and identify the mecA, icaA and icaD genes and the resistant proflife to antibiotics. Overal, 458 swabs were taked from five pigeris and two slautherhouses. All the samples were placed on Braid – Parker and blood agar follow by biochemical analyses. The suspect colonies were submitted to PCR to confirm the S. aureus species, by the detection of the coa gene, mecA to avaible meticillin-resistant as son to the virulence gens icaA and icaD that can determine slime production. Antibiogram were done to evaluate the response to 11 antibiotics. All pigeris and slautherhouse were positive and 81 (79%) samples were S. aureus positive including three isolates from pigs employeers. The mecA gene was not detected. The icaD gene was most frequent and 41% were positive to both genes. The antibiogram show a lot of samples penicillin and tetraciclin resistant. Most of the samples were multirestant
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Ding, Jin Wen. "Obstructive jaundice an experimental study on host defense failure and intestinal bacterial translocation in the rat /." Lund : Dept. of Suregry, Lund University, 1993. http://catalog.hathitrust.org/api/volumes/oclc/39793417.html.
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Hjerdt-Goscinski, Gunilla. "Antibiotic-induced Bacterial Toxin Release – Inhibition by Protein Synthesis Inhibitors." Doctoral thesis, Uppsala : Acta Universitatis Upsaliensis : Univ.-bibl. [distributör], 2004. http://urn.kb.se/resolve?urn=urn:nbn:se:uu:diva-4692.
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Proto, Mariarita <1990>. "Essential oils and hydrolates as potential tools for integrated prevention of bacterial diseases in plants." Doctoral thesis, Alma Mater Studiorum - Università di Bologna, 2022. http://amsdottorato.unibo.it/10292/1/TESI%20PhD%20MRP.pdf.
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The present work aims to investigate the potential use of natural substances against bacterial plant pathogens. Microdilution tests were therefore carried out in vitro to identify the minimum inhibitory and bactericidal concentrations (MIC and MBC) of several EOs and Hys against selected bacterial pathogens. Commercial products based on a mixture of EOs were in addition assayed with macrodilution experiments against Erwinia amylovora (Ea-causal agent of fire blight). Subsequently, using selected EOs, Hys, and commercial products, ex vivo tests on disease incidence and Ea population dynamics were carried out; the latter experiment was followed by SEM observations. In addition, in vivo resistance induction test was carried out against bacterial leaf of tomato, caused by Xanthomonas vesicatoria (Xv). EOs and Hys showed high bactericidal activity in vitro (MBC <0.1 and <10% for the most active EOs and Hys: Origanum compactum and Thymus vulgaris EOs and Citrus aurantium var. amara Hy, respectively), but they were not effective ex vivo, while resulted very active when used in vivo as resistance inducers in the tomato-Xv pathosystem (relative protection >40%). Differently, commercial products resulted active in all tests, but not as resistance inducers against Xv. An open field trial with commercial products was carried out on strawberry plants naturally infected with Xanthomonas fragariae; the results showed discrete relative protection, concerning that provided by the conventional products based on copper; mostly, the disease severity reduction on those plants treated with EOs commercial products was significant when disease severity resulted high. The papers already published described in the present work investigate (1)the activity of Hys in comparison to EOs with respect to their active volatile content; (2) the potential use of EOs and Hys in cultural heritage; for the restoration of paintings; (3) the induction of resistance caused by plasma-activated water-based root treatments.
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Qarani, Sozan. "Investigation of the role of the non-integrin laminin receptor in the pathogenesis of bacterial meningitis." Thesis, University of Nottingham, 2016. http://eprints.nottingham.ac.uk/31739/.
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The human non-integrin laminin receptor (LamR) is a multifunctional protein which is localised to a number of sub-cellular locations. LamR is a component of the ribosome and has a number of intracellular functions; it also acts as an extracellular receptor for laminin, growth factors, pathogenic microorganisms, prion proteins, toxins and the anticarcinogen epigallocatechin gallate (ECGC). Although LamR is present in most cellular compartments, its overexpression in many types of cancer cells suggests a vital role for LamR in tumor-cell migration and invasion. There are two isoforms of laminin receptor: the monomeric 37-kDa laminin receptor precursor (37LRP) and the mature 67-kDa laminin receptor (67LR). Although the precise molecular nature of 67LR is unclear, accumulating evidence strongly suggest that 37LRP can undergo homo- and/or hetero-dimerization with Galectin-3 (Gal-3) to form mature 67LR. A recent study demonstrated that both homo- and heterodimer LamR forms are present on the cell surface, where they form distinct populations. Neisseria meningitidis, Streptococcus pneumoniae and Haemophilus influenzae type b (Hib) are major causes of bacterial meningitis. The contribution of LamR in traversal of the blood brain barrier (BBB) by neurotropic viruses is well established and interaction with LamR was recently found to be critical for initiation of bacterial contact with the blood brain barrier (BBB). These bacteria bind LamR via the surface protein adhesins: meningococcal PilQ and PorA; pneumococcal CbpA; and H. influenzae OmpP2. Further investigations showed that the fourth and second extracellular loops of meningococcal PorA and OmpP2 of H. influenzae, respectively, are responsible for LamR binding. The work presented here consists of two complementary projects in which a number of approaches were taken to characterise the ligand-binding domains of LamR. The first project aimed to identify sites on LamR that are critical for binding the ligands of bacterial meningeal pathogens. The second project aimed to identify residues that contribute to the stability of LamR homodimers and the heterodimer with Gal-3. Several mutations were introduced into full-length human LamR, either by deletion mutations within the C-terminal domain (CTD) of LamR using inverse polymerase chain reaction (IPCR), or by single-amino acid substitution in the N-terminal domain (NTD) of LamR using site-directed mutagenesis. Protocols for large-scale expression of full-length and truncated LamR proteins in human cells were developed, as well as non-denaturing purification protocols. We hypothesised that bacteria-binding domains could be located on both the NTD and CTD of LamR. In vivo examination using ELISA assays, in which the interaction of LamR and whole bacteria or purified recombinant PorA or PilQ were tested identified several novel sites on LamR that contributed significantly to binding of the bacterial ligands. These sites include amino acids 206-229 and 263-282, located within the CTD, and Tyrosine 156 in the NTD, each of which contributed to the binding of meningococcal PorA, and more specifically it’s fourth extracellular loop. Furthermore, three sites on LamR comprising amino acids 206-229 and 263-282 within the CTD and Tyrosine 139 in the NTD were shown to contribute to binding pneumococcal CbpA, OmpP2 and Loop two of OmpP2 of H. influenzae. These results indicate that the three neuroinvasive bacteria share the same binding sites on LamR. Bimolecular fluorescence complementation (BifC) coupled with flow cytometry and confocal microscopy revealed the vital contribution of amino acid residues Arginine 155, Tyrosine 156 and Lysine 166 (all within the NTD of LamR) for the homodimerization and heterodimerization of LamR with Gal-3. The dimerization of two meningococcal host receptors, LamR and Gal-3, may help to extend spectrum of their bacterial adhesins, which may act cooperatively or synergistically at different stages of infection. Information about the residues in LamR that contribute to the stabilization of LamR dimers has implications for the role of LamR dimers in the pathogenesis of bacterial meningitis. Identification of bacteria-binding domains on LamR is of particular interest for development of vaccines or therapeutic interventions that provide protection against the three major meningitis-causing bacteria. The aim of the current work was first to localise the domains of LamR responsible for binding with PorA and PilQ of N. meningitidis; CbpA and OmpP2 of S. pneumonia, and OmpP2 of H. influenzae. Also, previous studies have shown conspicuous homodimerisation of 37LRP and heterodimerisation with Gal-3. Our second aim was to identify of amino acid residues involved in 37LRP self-association and heterodimer formation with Gal-3. In current work, several regions of LamR were hypothesised to constitute the binding site for the bacterial ligands; these predictions were based on previous studies on LamR binding domains and the crystal structure of laminin receptor. Also, to investigate both homo and heterodimerisation of LamR, the involvement of several putative amino acid residues within 37LRP in LamR dimerisation was was hypothesised.
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Pratten, Jonathan Richard. "Effect of chlorhexidine and other antimicrobial agents on the formation and viability of oral bacterial biofilms." Thesis, University College London (University of London), 1998. http://ethos.bl.uk/OrderDetails.do?uin=uk.bl.ethos.298433.
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