Relevant bibliographies by topics / Barcode library

Contents

  1. Journal articles
  2. Dissertations / Theses
  3. Books
  4. Book chapters
  5. Conference papers
  6. Reports

Academic literature on the topic 'Barcode library'

Author: Grafiati
Published: 3 June 2025
Last updated: 31 July 2025

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Journal articles on the topic "Barcode library"

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Blois, Sylvain, Benjamin M. Goetz, James J. Bull, and Christopher S. Sullivan. "Interpreting and de-noising genetically engineered barcodes in a DNA virus." PLOS Computational Biology 18, no. 11 (2022): e1010131. http://dx.doi.org/10.1371/journal.pcbi.1010131.

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The concept of a nucleic acid barcode applied to pathogen genomes is easy to grasp and the many possible uses are straightforward. But implementation may not be easy, especially when growing through multiple generations or assaying the pathogen long-term. The potential problems include: the barcode might alter fitness, the barcode may accumulate mutations, and construction of the marked pathogens may result in unintended barcodes that are not as designed. Here, we generate approximately 5000 randomized barcodes in the genome of the prototypic small DNA virus murine polyomavirus. We describe th
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Fahldieck, Moritz, Björn Rulik, Jana Thormann, and Ximo Mengual. "A DNA barcode reference library for the Tipulidae (Insecta, Diptera) of Germany." Biodiversity Data Journal 12 (September 24, 2024): e127190. https://doi.org/10.3897/BDJ.12.e127190.

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Tipulidae, commonly known as true crane flies, represent one of the most species-rich dipteran families, boasting approximately 4,500 known species globally. Their larvae serve as vital decomposers across diverse ecosystems, prompting their frequent and close observation in biomonitoring programs. However, traditional morphological identification methods are laborious and time-consuming, underscoring the need for a comprehensive DNA barcode reference library to speed up species determination.In this study, we present the outcomes of the German Barcode of Life initiative focused on Tipulidae. O
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Stuart, Julius D., Natalie R. Wickenkamp, Kaleb A. Davis, Camden Meyer, Rebekah C. Kading, and Christopher D. Snow. "Scalable Combinatorial Assembly of Synthetic DNA for Tracking Applications." International Journal of Molecular Sciences 24, no. 3 (2023): 2549. http://dx.doi.org/10.3390/ijms24032549.

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Synthetic DNA barcodes are double-stranded DNA molecules designed to carry recoverable information, information that can be used to represent and track objects and organisms. DNA barcodes offer robust, sensitive detection using standard amplification and sequencing techniques. While numerous research groups have promoted DNA as an information storage medium, less attention has been devoted to the design of economical, scalable DNA barcode libraries. Here, we present an alternative modular approach to sequence design. Barcode sequences were constructed from smaller, interchangeable blocks, allo
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Sikes, Derek S., Matthew Bowser, John M. Morton, Casey Bickford, Sarah Meierotto, and Kyndall Hildebrandt. "Building a DNA barcode library of Alaska’s non-marine arthropods." Genome 60, no. 3 (2017): 248–59. http://dx.doi.org/10.1139/gen-2015-0203.

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Climate change may result in ecological futures with novel species assemblages, trophic mismatch, and mass extinction. Alaska has a limited taxonomic workforce to address these changes. We are building a DNA barcode library to facilitate a metabarcoding approach to monitoring non-marine arthropods. Working with the Canadian Centre for DNA Barcoding, we obtained DNA barcodes from recently collected and authoritatively identified specimens in the University of Alaska Museum (UAM) Insect Collection and the Kenai National Wildlife Refuge collection. We submitted tissues from 4776 specimens, of whi
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Mandal, Sukumar. "Designing Barcode Generation Interface: A Methodology of an Integrated Framework for Libraries." Asian Journal of Information Science and Technology 7, no. 2 (2017): 16–20. http://dx.doi.org/10.51983/ajist-2017.7.2.156.

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Nowadays libraries are facing the challenges posed by a diverse and rapidly expanding information universe. Increased user expectations for faster and easier access to relevant information go hand in hand with institutional demands for increased operational efficiency. Integrated library system required to makes it easier for housekeeping operations in a library. Barcode is a part of housekeeping operation. The process of library automation in different aspects also helps to make better use of existing library services and staff. It allows for the improvement of library in the variety, amount
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Huemer, Peter, Ole Karsholt, Leif Aarvik, et al. "DNA barcode library for European Gelechiidae (Lepidoptera) suggests greatly underestimated species diversity." ZooKeys 921 (March 24, 2020): 141–57. http://dx.doi.org/10.3897/zookeys.921.49199.

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For the first time, a nearly complete barcode library for European Gelechiidae is provided. DNA barcode sequences (COI gene – cytochrome c oxidase 1) from 751 out of 865 nominal species, belonging to 105 genera, were successfully recovered. A total of 741 species represented by specimens with sequences ≥ 500bp and an additional ten species represented by specimens with shorter sequences were used to produce 53 NJ trees. Intraspecific barcode divergence averaged only 0.54% whereas distance to the Nearest-Neighbour species averaged 5.58%. Of these, 710 species possessed unique DNA barcodes, but
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Huemer, Peter, Ole Karsholt, Leif Aarvik, et al. "DNA barcode library for European Gelechiidae (Lepidoptera) suggests greatly underestimated species diversity." ZooKeys 921 (March 24, 2020): 141–57. https://doi.org/10.3897/zookeys.921.49199.

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For the first time, a nearly complete barcode library for European Gelechiidae is provided. DNA barcode sequences (COI gene – cytochrome c oxidase 1) from 751 out of 865 nominal species, belonging to 105 genera, were successfully recovered. A total of 741 species represented by specimens with sequences ≥ 500bp and an additional ten species represented by specimens with shorter sequences were used to produce 53 NJ trees. Intraspecific barcode divergence averaged only 0.54% whereas distance to the Nearest-Neighbour species averaged 5.58%. Of these, 710 species possessed unique DNA barcodes, but
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Gunawan, Arief. "PEMANFAATAN APLIKASI SLIMS SENAYAN VERSI 7 CENDANA PORTABLE DALAM PEMBUATAN BARCODE KOLEKSI PERPUSTAKAAN PUSAT RISET PERIKANAN." Jurnal Pari 3, no. 2 (2018): 113. http://dx.doi.org/10.15578/jp.v3i2.6804.

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ABSTRAKPembuatan kode batang (barcode) merupakan salah satu kegiatan perpustakaan dalam penerapan pencariankembali buku dan pengembalian ke tempat rak buku dengan lebih mudah dengan menggunakan teknologi informasi.Slims Senayan merupakan salah satu program perpustakaan yang dalam pilihan menunya ada pembuatan barcode yangbisa digunakan pustakawan dengan cara yang mudah digunakan sehingga bisa lebih bermanfaat dalam pengelolaankoleksi perpustakaan dan memanfaatkan teknologi informasi. Dalam proses pengecekan barcode digunakan hardware“barcode scanner”. Dengan penggunaan barcode ini diharapkan p
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Mabragaña, Ezequiel, Valeria Gabbanelli, Florencia Matusevich, et al. "DNA Barcoding Southwestern Atlantic Skates: A 20-Year Effort in Building a Species Identification Library." Diversity 17, no. 5 (2025): 311. https://doi.org/10.3390/d17050311.

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The skate fauna in the Southwest Atlantic Ocean (SWA; 34–55° S) is represented by ~32 species, many of which share external features that have led to misidentifications and deficient fishery statistics. The use of DNA barcoding to discriminate SWA skate species was explored after 20 years of surveys. COI sequences were subjected to distance-based neighbor-joining (NJ), maximum likelihood (ML), barcode index number (BIN), automatic barcode gap discovery (ABGD), and nucleotide diagnostic character (NDC) analyses. For widely distributed species, a haplotype network was built. Overall, 187 specime
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Jażdżewska, Anna Maria, Anne Helene S. Tandberg, Tammy Horton, and Saskia Brix. "Global gap-analysis of amphipod barcode library." PeerJ 9 (November 4, 2021): e12352. http://dx.doi.org/10.7717/peerj.12352.

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In the age of global climate change and biodiversity loss there is an urgent need to provide effective and robust tools for diversity monitoring. One of the promising techniques for species identification is the use of DNA barcoding, that in Metazoa utilizes the so called ‘gold-standard’ gene of cytochrome c oxidase (COI). However, the success of this method relies on the existence of trustworthy barcode libraries of the species. The Barcode of Life Data System (BOLD) aims to provide barcodes for all existing organisms, and is complemented by the Barcode Index Number (BIN) system serving as a
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Dissertations / Theses on the topic "Barcode library"

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Vymazalová, Jana. "Aplikace logistiky ve Vědecké knihovně Olomouc." Master's thesis, Vysoká škola ekonomická v Praze, 2011. http://www.nusl.cz/ntk/nusl-114369.

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This master's thesis investigates the of logistics of Research library in Olomouc and offers improvements. I introduce the Czech library system and then concentrate on the Olomouc library's history and the operations of individual departments. I found that the depositories could be improved in aspects such storage and overall building condition. The library uses barcodes for loan administration. To introduce the options of improvements of the library, I describe new technologies that are in use abroad such as RFID tags or shelf stacker in the storage rooms. I believe that the efficacy of libra
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Li, Yanhui. "Construction and Analysis of a Genome-Wide Insertion Library in Schizosaccharomyces pombe Reveals Novel Aspects of DNA Repair." Case Western Reserve University School of Graduate Studies / OhioLINK, 2015. http://rave.ohiolink.edu/etdc/view?acc_num=case1413927620.

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CECCHETTO, MATTEO. "Structure and temporal dynamics of marine biodiversity in the Terra Nova Bay area (Ross Sea, Antarctica) analysed through DNA barcoding and metabarcoding: A standardized and systematic approach for the construction of a “DNA Barcode” library." Doctoral thesis, Università degli studi di Genova, 2021. http://hdl.handle.net/11567/1047269.

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Aims and structure of the thesis: The firs objective of this thesis consisted in the quantification of the reference library completeness for the Cytochrome c oxidase subunit I (COI) barcode of metazoan species occurring in the Ross Sea MPA and in identifying which taxonomic groups in the last decades were investigated by using “DNA barcode” techniques performed in the Southern Ocean. In order to do that, all the available sequence data on major public repositories were gathered and analyzed. A collection of COI sequences amplified from specimen of the Italian National Antarctic Museum (MNA)
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Tian, Zhu-Yu, and 田祝宇. "A Barcode Based Library Inventory System with Near-Instant Barcode Images Tagging Capacity Using Smart Mobile Devices." Thesis, 2016. http://ndltd.ncl.edu.tw/handle/8d5vpc.

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碩士<br>國立臺灣海洋大學<br>電機工程學系<br>104<br>This thesis is the fourth generation of a continuing research effort to build a barcode image based library inventory system. With the first two generations of the system, digital cameras were used to take pictures of books on the shelves, mainly for capturing the barcode labels stuck to the spines of the books. Those pictures then went through a series of processing steps done on a backend server, including barcode localization, segmentation, and identification. The third generation of the system emphasized the use of smart mobile devices for capturing and t
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Lin, Bo-Heng, and 林柏亨. "Algorithm and Performance Enhancements for a Barcode Based Library Inventory System." Thesis, 2014. http://ndltd.ncl.edu.tw/handle/23062223741531567007.

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Wu, Ming-Heng, and 吳明衡. "A Near-Instant Barcode-Based Library Inventory System Using Smart Mobile Devices." Thesis, 2016. http://ndltd.ncl.edu.tw/handle/9b63t7.

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碩士<br>國立臺灣海洋大學<br>電機工程學系<br>104<br>This thesis is a continuation of an effort to develop a barcode image based library inventory system. This research represents the third phase of the development in progress which emphasizes on establishing a highly efficient workflow, where photo images containing many barcodes are sent on-site through the Wi-Fi network to the server for processing and the results of database matching and related instructions are sent right back to the personnel inventorying. The development effort of this phase aims at transforming the original three-step inventory workflow
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Leng, Chien-Chiang, and 冷建強. "A Feasibility Study on the Application of RFID/Barcode Parallel Mode -A Case Study of Library Management System." Thesis, 2006. http://ndltd.ncl.edu.tw/handle/36806936181772352702.

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碩士<br>開南管理學院<br>資訊及電子商務學系<br>94<br>Radio Frequency Identification (RFID) has been utilized as a method for distinguishing enemy aircrafts during World War II, but it is until recent impetuses from Wal-Mart and United States Department of Defense has attention been paid to this technology.RFID adopts contact-less method to transmit and update information, and now Electronic Product Code (EPC), based on RFID technology has gradually replaced the use of Bar Codes to retrieve data. RFID has grown to be widely employed in our daily lives, including its application on warehouse management, electroni
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Antunes, Ilisa Daniela Costa. "Biblioteca de referência de DNA barcodes de anfípodes (Crustacea: Amphipoda) da costa Portuguesa." Master's thesis, 2016. http://hdl.handle.net/1822/42975.

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Dissertação de mestrado em Ecologia<br>Os anfípodes são um grupo diverso de crustáceos que ocorrem em variados tipos de habitats aquáticos, sendo a maioria das espécies marinhas. Este estudo tem como objetivo contribuir para a implementação de uma biblioteca de referência de DNA barcodes de anfípodes da costa Portuguesa. A identificação de espécies de anfípodes com base na morfologia é uma tarefa frequentemente morosa, muito dependente de especialistas, e nem sempre bem-sucedida. Esta biblioteca de referência pretende constituir uma ferramenta taxonómica complementar, que permita aumentar
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Ho, Cheuk Hei. "Molecular Barcoded Plasmid Yeast ORF Library: Linking Bioactive Compounds to their Cellular Targets and Mapping Dosage Suppressor Networks." Thesis, 2011. http://hdl.handle.net/1807/29745.

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In this thesis I describe a functional genomics resource in which each yeast gene, with its native promoter and 3’UTR, is cloned on a uniquely barcoded low-copy vector. We refer to this resource as the Molecular Barcoded Yeast ORF (MoBY-ORF) library 1.0. Each gene carried by MoBY-ORF 1.0 should mimic its native expression and thus is best suited for complementation cloning. The vector backbone of MoBY-ORF 1.0 is compatible with the mating-assisted genetically integrated cloning (MAGIC) system for recombination cloning in bacterial cells, which allows the transfer of the ORF fragment and its b
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Books on the topic "Barcode library"

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Rosselli, Juan Pablo Aschner. Contrapunto y confluencia en el concierto arquitectónico: Biblioteca Virgilio Barco. Universidad Nacional de Colombia, Sede Bogota, Facultad de Artes, 2008.

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Universidad Nacional de Colombia. Facultad de Artes., ed. Contrapunto y confluencia en el concierto arquitectónico: Biblioteca Virgilio Barco. Universidad Nacional de Colombia, Sede Bogota, Facultad de Artes, 2008.

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Melville, Herman. Moby-Dick. Washington Square Press, 1999.

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Melville, Herman. Moby Dick. Oxford University Press, 2008.

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Melville, Herman. Moby-Dick, or, The whale. Macmillan, 1985.

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Melville, Herman. Moby-Dick, or, The whale. Vintage Books/Library of America, 1991.

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Melville, Herman. Moby Dick, or, The whale. Barnes & Noble Books, 1994.

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Melville, Herman. Moby-Dick, or, The whale. Walker Books, 2009.

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Melville, Herman. Moby-Dick: Or the whale. Northwestern University Press and The Newberry Library, 1988.

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Melville, Herman. Moby-Dick, or, The whale. Kennebec Large Print, 2009.

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Book chapters on the topic "Barcode library"

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Kasemsap, Kijpokin. "The Role of Radio Frequency Identification in Modern Libraries." In Advances in Library and Information Science. IGI Global, 2015. http://dx.doi.org/10.4018/978-1-4666-8178-1.ch021.

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This chapter reveals the role of radio frequency identification (RFID) in modern libraries, thus demonstrating the theoretical and practical concept of RFID; the utilization of RFID in global operations; RFID perspectives in modern libraries (i.e., operating cost, information technology infrastructure cost, skilled RFID workers, access rate, patron policy, data security, barcode factor, and patron issues); the applications of RFID in modern libraries (i.e., data management, circulation, inventory, assistance in searching and orientation, data accuracy and reliability, theft prevention, utiliza
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Su, W., B. Xia, and T. L. Foley. "5.2 On-DNA Resynthesis and Affinity Selection Mass Spectrometry (ASMS)." In DNA-Encoded Libraries. Georg Thieme Verlag KG, 2024. http://dx.doi.org/10.1055/sos-sd-241-00296.

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AbstractA limitation of the split-and-pool approach in creating DNA-encoded libraries (DELs) is that DNA-conjugated side products and starting materials generally cannot be removed during DEL production. Consequently, the same DNA barcode encodes all the products generated during library synthesis (including byproducts) rather than just a single product. In the use of off-DNA resynthesis to confirm hits after affinity selection, a “one-to-one” relationship between the DNA tag and the structure of the attached molecule it encodes is often assumed. However, because library synthesis often yields
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Jost, Richard M. "Data Migration, Retrospective Conversion, and Barcodes." In Selecting and Implementing an Integrated Library System. Elsevier, 2016. http://dx.doi.org/10.1016/b978-0-08-100153-0.00011-3.

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Xu, H., P. Ma, and G. Yang. "3.2.3.2 Natural-Product-Enriched DELs." In DNA-Encoded Libraries. Georg Thieme Verlag KG, 2024. http://dx.doi.org/10.1055/sos-sd-241-00242.

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AbstractNatural products are privileged compounds of natural evolution that are often rich in sp3 carbon atoms, bear multiple stereocenters, and have diverse skeletons. These features endow natural products with a broad spectrum of pharmacological activities. As a consequence, natural products play a key role in the history of medical treatment and drug discovery. The natural-product-enriched DNA-encoded library (nDEL) approach allows natural products or bioactive chemical molecules with known biological functions to be readily annotated with unique amplifiable DNA barcodes by so-called “late-
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Chen, Qiuxia, and David I. Israel. "Affinity-based DEL Selections with Different Target Types: Overview and Achievements." In DNA-encoded Library Technology for Drug Discovery. Royal Society of Chemistry, 2025. https://doi.org/10.1039/9781788016032-00001.

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DNA-encoded library (DEL) selection is typically an affinity-based process that encompasses the incubation of DELs with a target, separation of compounds that bind the target from those that do not bind, amplification and sequencing of the DNA barcodes, and decoding to reveal the chemical structures of binders. DEL technology has had a notable impact in drug discovery with various projects progressing into different stages of development and clinical trials. DEL methodology allows for ultra-high throughput screening, permitting exploration of broad chemical diversity and rapid identification o
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Conference papers on the topic "Barcode library"

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Sabhapondit, Anupom, Aruna V T, Rajiv Srinivasan, Karl Stephenne, and Sukanta Ghosh. "Evaluation of Glass Reinforced Plastic for Post Combustion CO2 Capture Amine Service." In CONFERENCE 2023. AMPP, 2023. https://doi.org/10.5006/c2023-18832.

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Abstract Carbon capture, sequestration, and storage (CCS) is considered as an immediate possible measure to address global warming by reducing CO2 emission to the environment. Amines are used widely to capture CO2 gas from industrial exhaust gas streams. Introduction of cost-effective construction materials in the amine services can offer significant cost benefit to the users. Therefore, an extensive laboratory study was conducted to evaluate glass reinforced plastic (GRP) as a construction material for some large equipment used in the process. Very limited published record was found studying
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Roscan, Stafenel. "USING MULTOS IN ELEARNING." In eLSE 2020. University Publishing House, 2020. http://dx.doi.org/10.12753/2066-026x-20-183.

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Digitization is the process of converting information into a digital format. The economy that is based on digital computing technologies is known as Digital Economy. The digital economy is also sometimes called the Internet Economy or Web Economy. Right now, in most of the countries, inside the people's wallet, they probably have a couple of credit cards, an identification card, automatic teller machine cards (ATM card) and maybe a few other plastic cards. Without realizing it, these plastic cards have become a very important part of their life. Currently smart cards can be seen in the transpo
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Roscan, Stefanel. "BLOCKCHAIN IN ELEARNING. PERSPECTIVES FOR MILITARY LEARNING ARCHITECTURES." In eLSE 2020. University Publishing House, 2020. http://dx.doi.org/10.12753/2066-026x-20-184.

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Digitization is the process of converting information into a digital format. The economy that is based on digital computing technologies is known as Digital Economy. The digital economy is also sometimes called the Internet Economy or Web Economy. Right now, in most of the countries, inside the people's wallet, they probably have a couple of credit cards, an identification card, automatic teller machine cards (ATM card) and maybe a few other plastic cards. Without realizing it, these plastic cards have become a very important part of their life. Currently smart cards can be seen in the transpo
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Oren, Yaara, Pratiksha Thakore, Mike S. Cuoco, et al. "Abstract 2101: Targeting the root of cancer persister cells using an expressed barcode library." In Proceedings: AACR Annual Meeting 2019; March 29-April 3, 2019; Atlanta, GA. American Association for Cancer Research, 2019. http://dx.doi.org/10.1158/1538-7445.sabcs18-2101.

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Oren, Yaara, Pratiksha Thakore, Mike S. Cuoco, et al. "Abstract 2101: Targeting the root of cancer persister cells using an expressed barcode library." In Proceedings: AACR Annual Meeting 2019; March 29-April 3, 2019; Atlanta, GA. American Association for Cancer Research, 2019. http://dx.doi.org/10.1158/1538-7445.am2019-2101.

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McLain, Rachelle M., and Hannah McKelvey. "The Time Has Come... To Move Many Things: Inventorying and Preparing a Collection for Offsite Storage." In Charleston Library Conference. Purdue Univeristy, 2020. http://dx.doi.org/10.5703/1288284317169.

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In the spring of 2019, the Montana State University (MSU) Library embarked on a large-scale inventory project that involved weeding and moving portions of their collection to an offsite storage facility within six months in order to create more student study space in the Library. The department primarily responsible for leading the project, Collections Access &amp; Technical Services, the result of two departments merging, was also simultaneously navigating their new structure and a remodel of their workspace thus adding further challenges to the project. This poster session demonstrated how M
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"Creating the barcoded plasmid library to study the mechanisms of transgene integration." In SYSTEMS BIOLOGY AND BIOINFORMATICS (SBB-2020). Institute of Cytology and Genetics, Siberian Branch of the Russian Academy of Sciences., 2020. http://dx.doi.org/10.18699/sbb-2020-25.

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Sui, Jianye, Pengfei Xie, Zhongtian Lin, and Mehdi Javanmard. "Multiplexed molecular biomarker analysis using an expanded library of nanoelectronically barcoded particles enabled through machine learning analysis." In 2018 IEEE Micro Electro Mechanical Systems (MEMS). IEEE, 2018. http://dx.doi.org/10.1109/memsys.2018.8346584.

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Lira, Acza, Adrianne Veras, and Fabíola Araújo. "Jogo Educacional Digital para Auxiliar no Ensino de Numerais em Libras e Lógica de Conversão dos Números." In Computer on the Beach. Universidade do Vale do Itajaí, 2022. http://dx.doi.org/10.14210/cotb.v13.p220-227.

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In view of the importance of teaching computer concepts in basiceducation and a linguistic barrier between deaf and hearing people, this work presents the development of an educational game, cal-led Barco Binário, which helps in learning the logic of converting binary numbers in a playful way and associated with the intro-duction of numerals in Brazilian Sign Language for hearing. The evaluation of the tests applied to expert users indicated that 87,5%of the interviewees understood, partially or totally, the processof binary conversion and about 75% of the evaluators stated thatthey managed to
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Reports on the topic "Barcode library"

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Phung, Wilson, Christopher Hack, Harris Shapiro, Susan Lucas, and Jan-Fang Cheng. Scaling up the 454 Titanium Library Construction and Pooling of Barcoded Libraries. Office of Scientific and Technical Information (OSTI), 2009. http://dx.doi.org/10.2172/1012471.

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