Relevant bibliographies by topics / Barcoding gene

Contents

  1. Journal articles
  2. Dissertations / Theses
  3. Book chapters
  4. Conference papers
  5. Reports

Academic literature on the topic 'Barcoding gene'

Author: Grafiati
Published: 2 June 2025
Last updated: 31 July 2025

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Journal articles on the topic "Barcoding gene"

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Odah, Mohammad Ahmad Ahmad. "Unlocking the genetic code: Exploring the potential of DNA barcoding for biodiversity assessment." AIMS Molecular Science 10, no. 4 (2023): 263–94. http://dx.doi.org/10.3934/molsci.2023016.

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<abstract> <p>DNA barcoding is a crucial method for assessing and monitoring species diversity amidst escalating threats to global biodiversity. I explore DNA barcoding's potential as a robust and reliable tool for biodiversity assessment. It begins with a comprehensive review of existing literature, delving into the theoretical foundations, methodologies and applications of DNA barcoding. The suitability of various DNA regions, like the COI gene, as universal barcodes are extensively investigated. Additionally, the advantages and limitations of different DNA sequencing technologie
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SUSANTI, R., RETNO SRI ISWARI, FIDIA FIBRIANA, and INDRIAWATI INDRIAWATI. "The duck cytochrome oxidase I (COI) gene: Sequence and patterns analysis for potential barcoding tool." Biodiversitas Journal of Biological Diversity 19, no. 3 (2018): 997–1003. http://dx.doi.org/10.13057/biodiv/d190331.

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Susanti R, Iswari RS, Fibriana F, Indriawati. 2018. The duck cytochrome oxidase I (COI) gene: Sequence and patterns analysis for potential barcoding tool. Biodiversitas 19: 997-1003. The local duck DNA barcoding is still rarely conducted in Indonesia while DNA barcoding is extensively used as a tool of species identification and delineation tool. This study aimed to analyze the sequence and patterns of Central Javanese ducks mitochondrial cytochrome c oxidase subunit 1 (COI) gene. Feather samples of seven breeds of native duck were collected from traditional husbandries in Central Java. The sa
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Bezeng, B. S., T. J. Davies, B. H. Daru, et al. "Ten years of barcoding at the African Centre for DNA Barcoding." Genome 60, no. 7 (2017): 629–38. http://dx.doi.org/10.1139/gen-2016-0198.

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The African Centre for DNA Barcoding (ACDB) was established in 2005 as part of a global initiative to accurately and rapidly survey biodiversity using short DNA sequences. The mitochondrial cytochrome c oxidase 1 gene (CO1) was rapidly adopted as the de facto barcode for animals. Following the evaluation of several candidate loci for plants, the Plant Working Group of the Consortium for the Barcoding of Life in 2009 recommended that two plastid genes, rbcLa and matK, be adopted as core DNA barcodes for terrestrial plants. To date, numerous studies continue to test the discriminatory power of t
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Saputri, R., A. Arsyadi, F. S. Valen, and W. Wahyuni. "Molecular identification of Pelawan Merah (Tristaniopsis merguensis Griff.) as an endemic plant from Bangka Belitung Island using chloroplast DNA rbcL gene." IOP Conference Series: Earth and Environmental Science 1267, no. 1 (2023): 012065. http://dx.doi.org/10.1088/1755-1315/1267/1/012065.

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Abstract The DNA barcoding from this molecular identification will be submitted to the NCBI Genbank database to become a standard in the identification of Tristaniopsis merguensis Griff based on the rbcL gene analysis. This research will be used as a crucial information to identify the endemic species of Tristaniopsis merguensis Griff. which has no conservation status yet on IUCN Red List & Threated species. The stages of this research were collecting samples of Pelawan Merah leaves from Hutan Pelawan Namang, Central Bangka Regency. Molecular analysis was carried out to obtain the marker g
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Kolondam, Beivy J. "Evaluation of 16S rRNA Gene Sequence for DNA Barcoding of Tuna Fish." Jurnal Ilmiah PLATAX 10, no. 1 (2022): 108. http://dx.doi.org/10.35800/jip.v10i1.38861.

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For fish product authentication, DNA barcoding has been a reliable tool. This is due to its requirement of a small amount of tissue sample in order to conduct a full analysis for species identification. This research aimed to conduct an assessment for the use of 16S rRNA gene sequence for tuna fish identification through DNA barcoding. Previous in silico studies using the COI gene and CYB gene were conducted using the same tuna fish specimens. A comparison of 16S rRNA gene sequence between Bluefin tuna (five species), Yellowfin tuna (three species), and another group of tuna (five species) sho
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McFADDEN, CATHERINE S., YEHUDA BENAYAHU, ERIC PANTE, JANA N. THOMA, P. ANDREW NEVAREZ, and SCOTT C. FRANCE. "Limitations of mitochondrial gene barcoding in Octocorallia." Molecular Ecology Resources 11, no. 1 (2010): 19–31. http://dx.doi.org/10.1111/j.1755-0998.2010.02875.x.

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Li, Xiwen, Yang Yang, Robert J. Henry, Maurizio Rossetto, Yitao Wang, and Shilin Chen. "Plant DNA barcoding: from gene to genome." Biological Reviews 90, no. 1 (2014): 157–66. http://dx.doi.org/10.1111/brv.12104.

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HUTCHINSON, RACHEL, and JAMIE R. STEVENS. "Barcoding in trypanosomes." Parasitology 145, no. 5 (2017): 563–73. http://dx.doi.org/10.1017/s0031182017002049.

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SUMMARYTrypanosomes (genus Trypanosoma) are parasites of humans, and wild and domestic mammals, in which they cause several economically and socially important diseases, including sleeping sickness in Africa and Chagas disease in the Americas. Despite the development of numerous molecular diagnostics and increasing awareness of the importance of these neglected parasites, there is currently no universal genetic barcoding marker available for trypanosomes. In this review we provide an overview of the methods used for trypanosome detection and identification, discuss the potential application of
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Mallo, Diego, and David Posada. "Multilocus inference of species trees and DNA barcoding." Philosophical Transactions of the Royal Society B: Biological Sciences 371, no. 1702 (2016): 20150335. http://dx.doi.org/10.1098/rstb.2015.0335.

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The unprecedented amount of data resulting from next-generation sequencing has opened a new era in phylogenetic estimation. Although large datasets should, in theory, increase phylogenetic resolution, massive, multilocus datasets have uncovered a great deal of phylogenetic incongruence among different genomic regions, due both to stochastic error and to the action of different evolutionary process such as incomplete lineage sorting, gene duplication and loss and horizontal gene transfer. This incongruence violates one of the fundamental assumptions of the DNA barcoding approach, which assumes
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EBACH, MALTE C. "Taxonomy and the DNA Barcoding Enterprise." Zootaxa 2742, no. 1 (2011): 67. http://dx.doi.org/10.11646/zootaxa.2742.1.5.

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DNA Barcoding is elusive to many taxonomists. Like the numbers in a barcode, barcoding attempts to link a type specimen with a part of its DNA, most commonly from the mitochondrial Cytochrome c Oxidase subunit I (COI) gene.
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Dissertations / Theses on the topic "Barcoding gene"

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Valadas, Samantha Yuri Oshiro Branco. "Caracterização molecular de isolados de Sarcocystis spp. obtidos de marsupiais do gênero Didelphis spp. pela análise de gene mitocondrial, gene de apicoplasto, espaçador interno transcrito (ITS-1) e genes codificadores de antígenos de superfície (SAGs)." Universidade de São Paulo, 2015. http://www.teses.usp.br/teses/disponiveis/10/10134/tde-14082015-170043/.

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Em um trabalho anterior, foi avaliada a variabilidade de Sarcocystis spp. isolados de gambás oriundos do estado do Rio Grande do Sul pesquisando sequências gênicas codificadoras de antígenos de superfície (SAGs). Os resultados indicaram haver linhagens de isolados de Sarcocystis (relacionadas geneticamente a S. falcatula) que trocam genes em prováveis processos de recombinação sexual. A proposta deste estudo foi de conhecer as variações gênicas e relações filogenéticas em Sarcocystis spp. isolados de gambás através da análise de loci gênicos de genoma mitocondrial (CytB), de genoma de apicopla
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Freitas, Thaís Kaus de. "EVOLUÇÃO DO GENE MITOCONDRIAL COI EM AEGLIDAE (CRUSTACEA, ANOMURA) E IMPLICAÇÕES PARA DNA BARCODING." Universidade Federal de Santa Maria, 2014. http://repositorio.ufsm.br/handle/1/5326.

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Coordenação de Aperfeiçoamento de Pessoal de Nível Superior<br>The mitochondrial gene COI is widely used as a molecular marker, and the region used for DNA barcoding is getting more and more popular to species delimitation and identification. However, the evolution patterns can vary along the genes depending on factors as the gene position in genome and taxonomic group, among others. Using one unique delimited region for all groups may not be suitable to a certain targeted taxon, or to answer its evolutionary questions. We examined the patterns of COI intra- and interspecific nucleotide diverg
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STEINFELDER, ROBERT SEBASTIAN. "Development and implementation of novel applications of massively parallel sequencing in precision medicine." Doctoral thesis, Università degli Studi di Milano-Bicocca, 2016. http://hdl.handle.net/10281/114589.

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Next-generation sequencing (NGS) based on “sequencing by synthesis”, such as Illumina’s MiSeq, NextSeq500 or HiSeq instruments has reached a state where consistency, throughput and quality make it a mature technology to use for cancer genome research, such as single-cell sequencing or in clinical diagnostics. Within the scope of this thesis, we designed and tested three protocols to mobilise high-throughput sequencing for precision medicine to provide optimal solutions for doctors to help with understanding, diagnosing and determining states of human cancer cells. Targeted re-sequencing of cli
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Pena, Michelle Mendonça [UNESP]. "DNA Barcoding em Utricularia (Lentibulariaceae)." Universidade Estadual Paulista (UNESP), 2015. http://hdl.handle.net/11449/136705.

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Made available in DSpace on 2016-04-01T17:54:52Z (GMT). No. of bitstreams: 0 Previous issue date: 2015-07-15. Added 1 bitstream(s) on 2016-04-01T18:00:35Z : No. of bitstreams: 1 000859555_20160715.pdf: 314328 bytes, checksum: de480f12444da2a9fedafb16079a9793 (MD5) Bitstreams deleted on 2016-07-25T13:17:41Z: 000859555_20160715.pdf,. Added 1 bitstream(s) on 2016-07-25T13:18:48Z : No. of bitstreams: 1 000859555.pdf: 4094738 bytes, checksum: 1c3690c0cf5379b39472b8236e1cdb9c (MD5)<br>A família Lentibulariaceae Rich. é considerada o maior grupo de plantas carnívoras dentre as angiospermas. Utricu
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Pena, Michelle Mendonça. "DNA "Barcoding" em Utricularia (Lentibulariaceae) /." Jaboticabal, 2015. http://hdl.handle.net/11449/136705.

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Orientador: Vitor Fernandes Oliveira de Miranda<br>Coorientador: Alessandro de Mello Varani<br>Banca: Marcos Tulio de Oliveira<br>Banca: Yoannis Domínguez Rodríguez<br>Resumo: A família Lentibulariaceae Rich. é considerada o maior grupo de plantas carnívoras dentre as angiospermas. Utricularia é o gênero de maior riqueza, com aproximadamente 250 espécies. Diversos estudos de identificação baseados em morfologia foram realizados para a família Lentibulariaceae, porém eles se mostram limitados para determinados grupos de espécies. Com base nisso a aplicação do DNA "Barcoding" pode ser uma import
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Bravo, Mayra. "Genetisk kartläggning av mygg : Artbestämning av mygg genom barcoding." Thesis, Umeå universitet, Biomedicinsk laboratorievetenskap, 2011. http://urn.kb.se/resolve?urn=urn:nbn:se:umu:diva-58621.

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Lima, Fran?oise Dantas de. "Gen?tica molecular e ecologia em uma abordagem integrativa para conserva??o de Octopus insularis Leite & Haimovici, 2008 no Atl?ntico Tropical." PROGRAMA DE P?S-GRADUA??O EM SISTEM?TICA E EVOLU??O, 2017. https://repositorio.ufrn.br/jspui/handle/123456789/23668.

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Submitted by Automa??o e Estat?stica (sst@bczm.ufrn.br) on 2017-07-17T13:30:06Z No. of bitstreams: 1 FrancoiseDantasDeLima_TESE.pdf: 8585044 bytes, checksum: 0ae8905bac9e200a95b966507fc7aa0e (MD5)<br>Approved for entry into archive by Arlan Eloi Leite Silva (eloihistoriador@yahoo.com.br) on 2017-07-19T15:09:29Z (GMT) No. of bitstreams: 1 FrancoiseDantasDeLima_TESE.pdf: 8585044 bytes, checksum: 0ae8905bac9e200a95b966507fc7aa0e (MD5)<br>Made available in DSpace on 2017-07-19T15:09:29Z (GMT). No. of bitstreams: 1 FrancoiseDantasDeLima_TESE.pdf: 8585044 bytes, checksum: 0ae8905bac9e200a95b9665
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Fouquet, Antoine. "Diversity and phylogeography of eastern Guiana Shield frogs." Thesis, University of Canterbury. School of Biological Sciences, 2008. http://hdl.handle.net/10092/2693.

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The Guiana Shield is a sub-region of Amazonia, one of the richest areas on earth in terms of species number. It is also one of the most pristine areas and is still largely unexplored. Species number, distribution, boundaries and their evolutionary histories remain at least unclear but most of the time largely unknown. This is the case for most Anurans, a group which is recognized as threatened globally and is disappearing even from pristine tropical forests. Given the pace of forest destruction and the growing concerns about climate change it is urgently necessary to obtain a better estimate o
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Kani, Michael. "The Efficacy of the DNA Barcoding Proctol in determining species in the red algal orders Batrachospermales and Thoreales and a comparison with the plastid rbcL gene." Thesis, 2009. http://hdl.handle.net/10012/4384.

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The red algae (Rhodophyta) is a monophyletic phylum and is comprised of seven classes including the Florideophyceae. The class monophyletic Florideophyceae is postulated to have diverged from the class Bangiophyceae and contains over 32 orders including the freshwater Batrachospermales and Thoreales. Classifications within these orders as well as the class are based predominantly on female reproductive characters and vegetative morphology. The order Batrachospermales contains a number of families and genera with the genus Batrachospermum being the largest with eight recognized sections. The o
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Miladi, Ramzi. "DNA barcoding identification of the macroalgal flora of Tunisia." Doctoral thesis, 2018. http://hdl.handle.net/11570/3119308.

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Tunisia has a key position in the Mediterranean and constitutes a transition area with a rich habitat diversity between eastern and western basins. The latest inventory of marine macrophytes dates back to 1987, updated in 1995. The target of this thesis was to carry on a molecular-assisted alpha taxonomy (MAAT) survey of macroalgae, which allowed to reveal cryptic species, allochthonous introductions and to identify problematic taxa. Twenty-six genetic species of Florideophyceae were resolved, including five new reports, two of which considered as doubtful for the Mediterranean, and two oth
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Book chapters on the topic "Barcoding gene"

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Borman, Andrew M., and Elizabeth M. Johnson. "Sequence-based Identification and Classification of Fungi." In Trends in the systematics of bacteria and fungi. CABI, 2021. http://dx.doi.org/10.1079/9781789244984.0198.

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Abstract This book chapter describes the advantages and limitations of the ITS Region as a universal barcode for fungal identification. The ITS region offers several practical advantages as a universal fungal barcode region. The region encompasses segments that permit resolution at different taxonomic levels as it includes the highly conserved 5.8S rRNA gene, the moderately rapidly evolving ITS2 region and the rapidly evolving ITS1 region, flanked by the highly conserved SSU and LSU genes which permit design of PCR primers that are almost panfungal. Over the last two decades the sequence-based
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Pizzolla, Angela, Simon P. Keam, Criselle D’Souza, Timothy Semple, and Paul J. Neeson. "Single-Cell Gene Expression, Clonality, and Feature Barcoding of Melanoma Tumor-Infiltrating Lymphocytes." In Methods in Molecular Biology. Springer US, 2021. http://dx.doi.org/10.1007/978-1-0716-1205-7_37.

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Weerasuriya, Nimalka, Noor Saeed Cheema, Marianna Wallace, et al. "Fungi: advances in understanding the role of root-associated fungi in soil." In Burleigh Dodds Series in Agricultural Science. Burleigh Dodds Science Publishing Limited, 2025. https://doi.org/10.19103/as.2024.0136.15.

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This chapter highlights the varied roles that root-associated soil fungi play in agricultural ecosystems. The authors begin by describing the relationship between fungi with plants before detailing the beneficial, antagonistic, and dynamic interactions between the two. Next they present an overview of methods for detection, identification, and analysis of communities of root-associated fungi. The authors then explore two crop root mycobiomes case studies: root and rhizosphere mycobiomes in corn and winter wheat, and the use of fungi isolated from high-yielding soil to improve crop performance
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Pandya, Nishi, Parth Pandya, and Pragna Parikh. "THE GENOMIC ERA OF INSECT TAXONOMY: BIOTECHNOLOGICAL ADVANCEMENTS." In Futuristic Trends in Biotechnology Volume 3 Book 3. Iterative International Publisher, Selfypage Developers Pvt Ltd, 2024. http://dx.doi.org/10.58532/v3bfbt3p2ch2.

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Insects, characterized by their high diversity and adaptability, play a pivotal role in insect biotechnology, addressing challenges such as identification and pest control. The integration of DNA barcoding, specifically targeting the COI gene, expedites biodiversity documentation and overcomes traditional taxonomy challenges. Biotechnological methods, including PCR and DNA sequencing, revolutionize molecular systematics, allowing for comprehensive gene analysis and a deeper understanding of insect phylogeny. Moreover, Next-generation sequencing (NGS) has transformed molecular taxonomy by enabl
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"Plant DNA Barcoding." In Advances in Environmental Engineering and Green Technologies. IGI Global, 2021. http://dx.doi.org/10.4018/978-1-7998-4312-2.ch006.

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DNA barcoding has evolved as an effective species identification tool in diverse areas such as phylogeny, ecology, population genetics, and biodiversity. In this approach, a short DNA sequence from a standardized locus is employed for species identification. The technique is simple, time and cost effective, and accurate. Selection of correct DNA marker is the main criterion for success in DNA barcoding. Compared to animals, DNA barcoding is more difficult in plants, as there are multiple consensuses about selection of barcoding markers for plants DNA barcoding. Some common plant barcoding mark
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Deka, Pradip Chandra. "Plant DNA Barcoding." In Research Anthology on Ecosystem Conservation and Preserving Biodiversity. IGI Global, 2022. http://dx.doi.org/10.4018/978-1-6684-5678-1.ch026.

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DNA barcoding has evolved as an effective species identification tool in diverse areas such as phylogeny, ecology, population genetics, and biodiversity. In this approach, a short DNA sequence from a standardized locus is employed for species identification. The technique is simple, time and cost effective, and accurate. Selection of correct DNA marker is the main criterion for success in DNA barcoding. Compared to animals, DNA barcoding is more difficult in plants, as there are multiple consensuses about selection of barcoding markers for plants DNA barcoding. Some common plant barcoding mark
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Sachithanandam, V., P. M. Mohan, N. Muruganandam, I. K. Chaaithanya, and R. Baskaran. "Molecular Taxonomy of Serranidae, Subfamily Epinephelinae, Genus Plectropomus (Oken, 1817) of Andaman Waters by DNA Barcoding Using COI Gene Sequence." In Marine Faunal Diversity in India. Elsevier, 2015. http://dx.doi.org/10.1016/b978-0-12-801948-1.00021-5.

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Maurya, Jyotsana. "DNA BARCODING." In Futuristic Trends in Biotechnology Volume 3 Book 15. Iterative International Publishers, Selfypage Developers Pvt Ltd, 2024. http://dx.doi.org/10.58532/v3bjbt15p5ch3.

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DNA barcoding is a technique used to identify plant species by using specific sections of DNA. The conventional approach to species identification is gradually diminishing due to constraints such as potential misinterpretation, overlooking morphologically cryptic.The two key coding regions, rbcL and matK, serve as primary DNA barcode markers for terrestrial plants. Each plant subjected to DNA barcoding must have a herbarium voucher alongside the rbcL and matK DNA sequences to create high-quality databases. In plants, both plastid DNA regions (rbcL, matK, trnL, and trnH-psbA) and nuclear DNA re
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Conference papers on the topic "Barcoding gene"

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Hanum, Laila, Cici Fitriana, Singgih Tri Wardana, Nita Aminasih, and Meli Puspita Sari. "Barcoding DNA of red rice local varieties in South Sumatra based on matK gene." In PROCEEDINGS OF THE 9TH INTERNATIONAL SYMPOSIUM ON INNOVATIVE BIOPRODUCTION INDONESIA ON BIOTECHNOLOGY AND BIOENGINEERING 2022: Strengthening Bioeconomy through Applied Biotechnology, Bioengineering, and Biodiversity. AIP Publishing, 2023. http://dx.doi.org/10.1063/5.0173515.

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Chenchik, Alex, Paul Diehl, and Mikhail Makhanov. "Abstract 3426: Combining cell barcoding and CRISPR sgRNA libraries with targeted gene expression for single-cell genetic analysis of tumor metastasis." In Proceedings: AACR Annual Meeting 2019; March 29-April 3, 2019; Atlanta, GA. American Association for Cancer Research, 2019. http://dx.doi.org/10.1158/1538-7445.am2019-3426.

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Chenchik, Alex, Paul Diehl, and Mikhail Makhanov. "Abstract 3426: Combining cell barcoding and CRISPR sgRNA libraries with targeted gene expression for single-cell genetic analysis of tumor metastasis." In Proceedings: AACR Annual Meeting 2019; March 29-April 3, 2019; Atlanta, GA. American Association for Cancer Research, 2019. http://dx.doi.org/10.1158/1538-7445.sabcs18-3426.

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Pratama, Risky, Mochamad Syaifudin, and Marini Wijayanti. "DNA Barcoding of Clown Loach Chromobotia macracanthus from Ogan and Musi River Based on Cytochrome C Oxidase Subunit I (COI) Gene." In Proceedings of the 3rd Sriwijaya International Conference on Environmental Issues, SRICOENV 2022, October 5th, 2022, Palembang, South Sumatera, Indonesia. EAI, 2023. http://dx.doi.org/10.4108/eai.5-10-2022.2328352.

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Arisuryanti, Tuty, Rika Lathif Hasan, and Johan Putra Koentjana. "Genetic identification of two mudskipper species (Pisces: Gobiidae) from Bogowonto Lagoon (Yogyakarta, Indonesia) using COI mitochondrial gene as a DNA barcoding marker." In INVENTING PROSPEROUS FUTURE THROUGH BIOLOGICAL RESEARCH AND TROPICAL BIODIVERSITY MANAGEMENT: Proceedings of the 5th International Conference on Biological Science. Author(s), 2018. http://dx.doi.org/10.1063/1.5050164.

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Arisuryanti, Tuty, Retno Sari, Syafrizal Ulum, et al. "Genetic characterization of red shrimp (Parhippolyte uveae Borradaile, 1900) from Tanjung Sanjangan (Tolitoli, Central Sulawesi) using COI mitochondrial gene as a barcoding marker." In THE 6TH INTERNATIONAL CONFERENCE ON BIOLOGICAL SCIENCE ICBS 2019: “Biodiversity as a Cornerstone for Embracing Future Humanity”. AIP Publishing, 2020. http://dx.doi.org/10.1063/5.0015913.

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Szaboova, Dana, Eliska Gburova Stubnova, and Ivona Kautmanova. "CHALLENGES ASSOCIATED WITH BARCODING METHOD." In 22nd SGEM International Multidisciplinary Scientific GeoConference 2022. STEF92 Technology, 2022. http://dx.doi.org/10.5593/sgem2022/5.1/s20.012.

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The DNA barcoding project provides a very quick and easy way to identify different types of organisms based on their DNA. The main objective of this study is to obtain the sequences of different species of fungi, plants and animals to map the biodiversity of Slovakia. This project also represents a new use for collections stored in natural history museums around the world. This paper shows in particular a laboratory view of the DNA barcoding project, such as the practical application of the methodology for different groups of organisms, the possibilities of using different genes and emphasizes
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Wardi, Epi Supri, Sumaryati Syukur, Zulkarnain Chaidir, Jamsari Jamsari, and Muthia Miranda Zaunit. "DNA barcoding for the discrimination of Uncaria gambir and closely related species using rbcL genes." In 3RD INTERNATIONAL CONFERENCE OF BIO-BASED ECONOMY FOR APPLICATION AND UTILITY. AIP Publishing, 2023. http://dx.doi.org/10.1063/5.0130594.

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Matos, William Latosinski, Dariane Castro Pereira, Patricia Orlandi Barth, et al. "Evaluation of extraction methods of high molecular weight DNA to reconstruct the circular genome of Enterobacterales using Oxford Nanopore Sequencing technology." In Resumos do 56º Congresso Brasileiro de Patologia Clínica/Medicina Laboratorial. Zeppelini Editorial e Comunicação, 2024. https://doi.org/10.5327/1516-3180.142s1.13081.

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Objective: The Oxford Nanopore Technologies (ONT) enables the identification of resistance genes and tracking of mobile genetic elements in clinical isolates. However, the quality and molecular weight of genomic DNA (gDNA) are vital for successful ONT sequencing, making DNA isolation a key step. The objective of his work was to compare two commercial DNA extraction kits in carbapenem-resistant enterobacterales (CRE) strains to evaluate their effectiveness in preserving gDNA integrity and purity for sequencing analysis and their impact on sequencing outcomes. Method: Sixteen bacterial isolates
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Reports on the topic "Barcoding gene"

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Gallego Sánchez, Gerardo J., Patricia Zapata, Oscar Castañeda, et al. Use of DNA sequences for identification of possible biotypes of the fruit borer Neoleucinodes elegantalis (Lepidoptera: Crambidae), an important pest of Andean solanaceous fruits. Centro Internacional de Agricultura Tropical (CIAT), 2015. http://dx.doi.org/10.21930/agrosavia.poster.2015.1.

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In Colombia, Venezuela, Ecuador, Brazil and Honduras, the tomato borer, Neoleucinodes elegantalis, is the most important fruit-related plague of the Solanaceae family. A suitable molecular characterization using a DNA barcoding system is necessary to clarify different issues inside the taxonomy of Neoleucinodes genus. Additionally, other DNA sequences used for molecular identification and phylogenetics studies, can be implemented to obtain a better understanding of the genetic variability across different animal groups and allows to acquire a enhanced description of the population s genetic va
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Guelzow, Emma, Tanya Dapkey, and Jeff Smith. Freshwater snail inventory at Upper Delaware Scenic and Recreational River. National Park Service, 2025. https://doi.org/10.36967/2309764.

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Abstract:
The Upper Delaware Scenic and Recreational River (UPDE) unit of the National Park Service partnered with the Academy of Natural Sciences of Drexel University (ANS) to perform a freshwater snail inventory within the park. ANS and UPDE teams conducted field research in July and August of 2022 and 2023 using a combination of kick-net sampling and hand-picking methods to determine the abundance and diversity of freshwater snail populations. Fifty-four sites were surveyed along the 73 miles of the Delaware River within UPDE and included cold-water and warmwater fisheries zones. In 2022, field colle
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