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Journal articles on the topic 'Bionectriaceae'

Author: Grafiati

Published: 5 June 2025

Last updated: 8 July 2025

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1

Wang, Yao, De-Xiang Tang, Hui Chen, Qi-Rui Li, Chanhom Loinheuang, and Xiang-Chun Shen. "Phylogenetic evidence reveal a close relationship between Amphichorda and Ovicillium in Bionectriaceae (Hypocreales)." MycoKeys 117 (May 15, 2025): 337–52. https://doi.org/10.3897/mycokeys.117.151366.

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Animal excrement serves as the primary substrate for Amphichorda, which is found in a wide range of habitats. Based on evolutionary relationships, the genus is currently classified within the Bionectriaceae. However, the phylogenetic position of Amphichorda and its associated taxa remains unresolved due to limited sampling in previous studies. Here, we discovered and identified five Amphichorda species, significantly advancing our understanding of this genus. Using six genomic loci (ITS, nrSSU, nrLSU, tef1α, rpb1, and rpb2) to expand taxonomic sampling, we reconstructed a phylogenetic framework for the Bionectriaceae, with a focus on Amphichorda and related taxa. Phylogenetic analyses revealed a close genetic connection between Amphichorda and related genera, yet they formed distinct clades within the Bionectriaceae and were clearly differentiated. The extensive sampling demonstrated stable phylogenetic relationships among Amphichorda, Hapsidospora, Ovicillium, Proxiovicillium, and Bulbithecium. Furthermore, we described two new species, A. guizhouensissp. nov. and O. pseudoattenuatumsp. nov., supported by DNA data and morphological characteristics. A comprehensive comparison of morphological traits across all members of Amphichorda and Ovicillium was conducted. This study clarifies taxonomic boundaries and evolutionary relationships within the two genera and contributes to the overall understanding of the biodiversity and systematics of the Bionectriaceae.

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2

Trovão, João, Fabiana Soares, Diana Sofia Paiva, Igor Tiago, and António Portugal. "Circumfusicillium cavernae gen. et sp. nov. (Bionectriaceae, Hypocreales) Isolated from a Hypogean Roman Cryptoporticus." Journal of Fungi 8, no. 8 (2022): 837. http://dx.doi.org/10.3390/jof8080837.

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Stone monuments and relics are prone to biodeterioration processes prompted by microbial proliferation and activity. Among the distinct microbes capable of stone colonization, fungi are known to strongly contribute to stone biodeterioration. During the ongoing efforts aiming to study fungi thriving in dolomitic limestone walls of the Coimbra’s hypogean Roman cryptoporticus (Portugal), two unknown Bionectriaceae isolates were retrieved. The aim of this work was to depict the molecular and phenotypic characteristics of these microorganisms. The phylogenetic analyses revealed that the studied strains could not be assigned to any of the currently known Bionectriaceae genera. Moreover, the isolates exhibited distinctive and peculiar characteristics, such as the packing of conidia by surrounding hyphal segments and the formation of rope-like microsclerotia with a textura globose. Taking into account all the data obtained, a novel genus and species, Circumfusicillium cavernae gen. et sp. nov. in Bionectriaceae (Hypocreales), is proposed here.

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3

ZHANG, SHENG-NAN, KEVIN D. HYDE, and JIAN-KUI LIU. "Morpho-phylogenetic evidence reveals Pseudobionectria phoenicis gen. et sp. nov. (Bionectriaceae) from a mangrove habitat." Phytotaxa 668, no. 3 (2024): 207–25. http://dx.doi.org/10.11646/phytotaxa.668.3.1.

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A bionectriaceous ascomycete was collected from palm rachides in a mangrove habitat. Multi-gene phylogenetic analyses indicated this fungus belongs within the Bionectriaceae, forming a sister lineage to Septofusidium herbarum and distinct from other known genera. In this study, we proposed the new genus Pseudobionectria to accommodate the novel species P. phoenicis. Pseudobionectria is distinguished from other genera in Bionectriaceae by its superficial, globose, brownish-orange ascomata with a black crown that is flattened on the top and hyphal appendages that merge with the subiculum below. The asci are unitunicate, lacking a visible apical ring, and the ascospores are 1-septate, oblong-ellipsoidal to fusiform, hyaline, and exhibit spinose ornamentation. The establishment of this new genus is supported by morphological and phylogenetic evidence. Additionally, this paper provides a synopsis of the genera within Bionectriaceae, including information on the type species, morphological characteristics, lifestyles, molecular data and key publications.

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4

Wang, Yao, De-Xiang Tang, Hui Chen, Qi-Rui Li, Chanhom Loinheuang, and Xiang-Chun Shen. "Phylogenetic evidence reveal a close relationship between Amphichorda and Ovicillium in Bionectriaceae (Hypocreales)." MycoKeys 117 (May 15, 2025): 337–52. https://doi.org/10.3897/mycokeys.117.151366.

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Animal excrement serves as the primary substrate for <i>Amphichorda</i>, which is found in a wide range of habitats. Based on evolutionary relationships, the genus is currently classified within the Bionectriaceae. However, the phylogenetic position of <i>Amphichorda</i> and its associated taxa remains unresolved due to limited sampling in previous studies. Here, we discovered and identified five <i>Amphichorda</i> species, significantly advancing our understanding of this genus. Using six genomic loci (ITS, nrSSU, nrLSU, <i>tef1α</i>, <i>rpb1</i>, and <i>rpb2</i>) to expand taxonomic sampling, we reconstructed a phylogenetic framework for the Bionectriaceae, with a focus on <i>Amphichorda</i> and related taxa. Phylogenetic analyses revealed a close genetic connection between <i>Amphichorda</i> and related genera, yet they formed distinct clades within the Bionectriaceae and were clearly differentiated. The extensive sampling demonstrated stable phylogenetic relationships among <i>Amphichorda</i>, <i>Hapsidospora</i>, <i>Ovicillium</i>, <i>Proxiovicillium</i>, and <i>Bulbithecium</i>. Furthermore, we described two new species, <i>A. guizhouensis</i> sp. nov. and <i>O. pseudoattenuatum</i> sp. nov., supported by DNA data and morphological characteristics. A comprehensive comparison of morphological traits across all members of <i>Amphichorda</i> and <i>Ovicillium</i> was conducted. This study clarifies taxonomic boundaries and evolutionary relationships within the two genera and contributes to the overall understanding of the biodiversity and systematics of the Bionectriaceae.

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5

Zhao, Lin, Johannes Zacharias Groenewald, Margarita Hernández-Restrepo, Hans-Josef Schroers, and Pedro Willem Crous. "Revising Clonostachys and allied genera in Bionectriaceae." Studies in Mycology 105 (June 12, 2023): 205–66. https://doi.org/10.3114/sim.2023.105.03.

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<em>Clonostachys (Bionectriaceae, Hypocreales)</em> species are common soil-borne fungi, endophytes, epiphytes, and saprotrophs. Sexual morphs of<em>Clonostachys</em> spp. were placed in the genus <em>Bionectria,</em> which was further segregated into the six subgenera <em>Astromata, Bionectria, Epiphloea, Myronectria,</em><em>Uniparietina,</em> and <em>Zebrinella.</em> However, with the end of dual nomenclature, <em>Clonostachys</em> became the single depository for sexual and asexual morphtypifiedspecies. Species of <em>Clonostachys</em> are typically characterised by penicillate, sporodochial, and, in many cases, dimorphic conidiophores (primary andsecondary conidiophores). Primary conidiophores are mononematous, either verticillium-like or narrowly penicillate. The secondary conidiophores generallyform imbricate conidial chains that can collapse to slimy masses, particularly on sporodochia. In the present study, we investigated the species diversitywithin a collection of 420 strains of <em>Clonostachys</em> from the culture collection of, and personal collections at, the Westerdijk Fungal Biodiversity Institute inUtrecht, the Netherlands. Strains were analysed based on their morphological characters and molecular phylogeny. The latter used DNA sequence dataof the nuclear ribosomal internal transcribed spacer regions and intervening 5.8S nrDNA (ITS) and partial 28S large subunit (LSU) nrDNA and partialprotein encoding genes including the RNA polymerase II second largest subunit (RPB2), translation elongation factor 1-alpha (TEF1) and β-tubulin (TUB2).Based on these results, the subgenera <em>Astromata, Bionectria, Myronectria</em> and <em>Zebrinella</em> are supported within <em>Clonostachys.</em> Furthermore, the genus<em>Sesquicillium</em> is resurrected to accommodate the former subgenera <em>Epiphloea</em> and <em>Uniparietina.</em> The close relationship of <em>Clonostachys</em> and <em>Sesquicillium</em>is strongly supported as both are inferred phylogenetically as sister-genera. New taxa include 24 new species and 10 new combinations. Recognition of<em>Sesquicillium</em> distinguishes species typically forming a reduced perithecial stroma superficially on plant tissue from species in <em>Clonostachys</em> often formingwell-developed, through bark erumpent stromata. The patterns of observed perithecial wall anatomies, perithecial wall and stroma interfaces, and asexualmorph diversifications described in a previously compiled monograph are used for interpreting ancestral state reconstructions. It is inferred that the commonancestor of <em>Clonostachys</em> and <em>Sesquicillium</em> may have formed perithecia superficially on leaves, possessed a perithecial wall consisting of a single region,and formed intercalary phialides in penicilli of conidiophores. Character interpretation may also allow hypothesising that diversification of morphs occurredthen in the two genera independently and that the frequently stroma-linked <em>Clonostachys</em> morphs evolved together with the occupation of woody host nichesand mycoparasitism.

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Zhang, Sheng-Nan, Kevin D. Hyde, and Jian-Kui Liu. "Morpho-phylogenetic evidence reveals Pseudobionectria phoenicis gen. et sp. nov. (Bionectriaceae) from a mangrove habitat." Phytotaxa 668, no. 3 (2024): 207–25. https://doi.org/10.11646/phytotaxa.668.3.1.

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Zhang, Sheng-Nan, Hyde, Kevin D., Liu, Jian-Kui (2024): Morpho-phylogenetic evidence reveals Pseudobionectria phoenicis gen. et sp. nov. (Bionectriaceae) from a mangrove habitat. Phytotaxa 668 (3): 207-225, DOI: 10.11646/phytotaxa.668.3.1, URL: https://doi.org/10.11646/phytotaxa.668.3.1

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7

Abdel-Wahab, Mohamed A., Ali H. Bahkali, Jones E. B. Gareth, et al. "Two new species of Kallichroma (Bionectriaceae, Hypocreales) from Saudi Arabian mangroves." Phytotaxa 260, no. 1 (2016): 66–74. https://doi.org/10.11646/phytotaxa.260.1.7.

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Abdel-Wahab, Mohamed A., Bahkali, Ali H., Gareth Jones, E. B., Elgorban, Abdallah M., Abdel-Aziz, Faten A., Hodhod, Mohamed S., Al-Hebshi, Mohamed O. (2016): Two new species of Kallichroma (Bionectriaceae, Hypocreales) from Saudi Arabian mangroves. Phytotaxa 260 (1): 66-74, DOI: 10.11646/phytotaxa.260.1.7, URL: http://dx.doi.org/10.11646/phytotaxa.260.1.7

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8

Hou, L.W., A. Giraldo, J.Z. Groenewald, et al. "Redisposition of acremonium-like fungi in Hypocreales." Studies in Mycology 105 (June 2, 2023): 23–203. https://doi.org/10.3114/sim.2023.105.02.

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<em>Acremonium</em> is acknowledged as a highly ubiquitous genus including saprobic, parasitic, or endophytic fungi that inhabit a variety of environments. Species of this genus are extensively exploited in industrial, commercial, pharmaceutical, and biocontrol applications, and proved to be a rich source of novel and bioactive secondary metabolites. <em>Acremonium</em> has been recognised as a taxonomically difficult group of ascomycetes, due to the reduced and high plasticity of morphological characters, wide ecological distribution and substrate range. Recent advances in molecular phylogenies, revealed that <em>Acremonium</em> is highly polyphyletic and members of Acremonium s. lat. belong to at least three distinct orders of Sordariomycetes, of which numerous orders, families and genera with acremonium-like morphs remain undefined. To infer the phylogenetic relationships and establish a natural classification for acremonium-like taxa, systematic analyses were conducted based on a large number of cultures with a global distribution and varied substrates. A total of 633 cultures with acremonium-like morphology, including 261 ex-type cultures from 89 countries and a variety of substrates including soil, plants, fungi, humans, insects, air, and water were examined. An overview phylogenetic tree based on three loci (ITS, LSU, <em>rpb2)</em> was generated to delimit the orders and families. Separate trees based on a combined analysis of four loci (ITS, LSU, <em>rpb2,</em> <em>tef-1α</em>) were used to delimit species at generic and family levels. Combined with the morphological features, host associations and ecological analyses, acremonium-like species evaluated in the present study are currently assigned to 63 genera, and 14 families in <em>Cephalothecales, Glomerellales</em> and <em>Hypocreales,</em> mainly in the families <em>Bionectriaceae, Plectosphaerellaceae</em> and <em>Sarocladiaceae</em> and five new hypocrealean families, namely <em>Chrysonectriaceae, Neoacremoniaceae, Nothoacremoniaceae, Pseudoniessliaceae</em> and <em>Valsonectriaceae.</em> Among them, 17 new genera and 63 new combinations are proposed, with descriptions of 65 new species. Furthermore, one epitype and one neotype are designated to stabilise the taxonomy and use of older names. Results of this study demonstrated that most species of <em>Acremonium</em> <em>s. lat.</em> grouped in genera of <em>Bionectriaceae,</em> including the type <em>A. alternatum</em>. A phylogenetic backbone tree is provided for <em>Bionectriaceae,</em> in which 183 species are recognised and 39 well-supported genera are resolved, including 10 new genera. Additionally, <em>rpb2</em> and <em>tef-1α </em>are proposed as potential DNA barcodes for the identification of taxa in <em>Bionectriaceae.</em>

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9

Giraldo, Alejandra, Josepa Gené, Deanna A. Sutton, Nathan Wiederhold, and Josep Guarro. "New acremonium-like species in the Bionectriaceae and Plectosphaerellaceae." Mycological Progress 16, no. 4 (2017): 349–68. http://dx.doi.org/10.1007/s11557-017-1271-7.

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10

Voglmayr, Hermann, and Walter M. Jaklitsch. "Stilbocrea walteri sp. nov., an unusual species of Bionectriaceae." Mycological Progress 18, no. 1-2 (2018): 91–105. http://dx.doi.org/10.1007/s11557-018-1427-0.

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11

Figueroa, Mario, Tyler N. Graf, Sloan Ayers, et al. "Cytotoxic epipolythiodioxopiperazine alkaloids from filamentous fungi of the Bionectriaceae." Journal of Antibiotics 65, no. 11 (2012): 559–64. http://dx.doi.org/10.1038/ja.2012.69.

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12

Guerra-Mateo, Daniel, Josepa Gené, Vladimir Baulin, and José Francisco Cano-Lira. "Phylogeny and Taxonomy of the Genus Amphichorda (Bionectriaceae): An Update on Beauveria-like Strains and Description of a Novel Species from Marine Sediments." Diversity 15, no. 7 (2023): 795. http://dx.doi.org/10.3390/d15070795.

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The genus Amphichorda has been recently re-erected as an independent lineage from Beauveria, circumscribed within Cordycipitaceae. However, its phylogenetic relationships with other members of this family remain obscure. In our ongoing efforts to expand the knowledge on the diversity of culturable ascomycetes from the Mediterranean Sea, we isolated several specimens of Amphichorda. Preliminary sequence analyses revealed great phylogenetic distance with accepted Amphichorda species and a close relation to Onychophora coprophila. Onychophora is a monotypic genus of enteroblastic conidiogenous cells, presumably related to Acremonium (Bionectriaceae), while Amphichorda exhibits holoblastic conidiogenesis. Here, we examine representative strains of Amphichorda species to elucidate the taxonomy of the genus and the aforementioned fungi, combining morphological, ultrastructure and multi-locus phylogenetic analyses (ITS, LSU, tef1, BenA). The results revealed Amphichorda as a member of the Bionectriaceae, where its asexual morphs represent a transition between enteroblastic and holoblastic conidiogenesis for this group of fungi. We also describe and illustrate Amphichorda littoralis sp. nov. and propose Amphichorda coprophila comb. nov. In addition, we establish key phenotypic features to distinguish Amphichorda species and demonstrate the higher salt tolerance degree of A. littoralis, consistent with its marine origin. This work provides a comprehensive framework for future studies in the genus.

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13

Fröhlich, Jane, Rosalind Lowen, and Kevin D. Hyde. "Fungi from palms. XL. Nectriella erythroclypea sp. nov. (Bionectriaceae, Hypocreales)." Nova Hedwigia 70, no. 3-4 (2000): 425–30. http://dx.doi.org/10.1127/nova.hedwigia/70/2000/425.

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14

Rossman, Amy Y., John M. McKemy, Rebecca A. Pardo-Schultheiss, and Hans-Josef Schroers. "Molecular Studies of the Bionectriaceae Using Large Subunit rDNA Sequences." Mycologia 93, no. 1 (2001): 100. http://dx.doi.org/10.2307/3761609.

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Rossman, Amy Y., John M. McKemy, Rebecca A. Pardo-Schultheiss, and Hans-Josef Schroers. "Molecular studies of the Bionectriaceae using large subunit rDNA sequences." Mycologia 93, no. 1 (2001): 100–110. http://dx.doi.org/10.1080/00275514.2001.12061283.

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16

Luo, Jing, and Wen-Ying Zhuang. "New species and new Chinese records of Bionectriaceae (Hypocreales, Ascomycota)." Mycological Progress 9, no. 1 (2009): 17–25. http://dx.doi.org/10.1007/s11557-009-0613-5.

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17

Grum-Grzhimaylo, Alexey A., Marina L. Georgieva, Alfons J. M. Debets, and Elena N. Bilanenko. "Are alkalitolerant fungi of the Emericellopsis lineage (Bionectriaceae) of marine origin?" IMA Fungus 4, no. 2 (2013): 213–28. http://dx.doi.org/10.5598/imafungus.2013.04.02.07.

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18

ZENG, ZHAO-QING, and WEN-YING ZHUANG. "A new fungicolous species of Hydropisphaera (Bionectriaceae, Hypocreales) from central China." Phytotaxa 288, no. 3 (2016): 279. http://dx.doi.org/10.11646/phytotaxa.288.3.9.

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A new fungicolous species, Hydropisphaera spinulosa, is described and illustrated based on a collection from central China. It is characterized by non-stromatic perithecia that are solitary to gregarious, globose to subglobose, and becoming cupulate upon drying. The asci are clavate, without an apical ring, and with ascospores that are ellipsoidal to fusiform, uniseptate, and with a spinulose surface. The asexual state is acremonium-like. Comparisons are made between the new species and morphologically similar taxa. Its taxonomic position in Hydropisphaera is confirmed by sequence analysis of the large subunit of the nuclear ribosomal DNA.

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19

ABDEL-WAHAB, MOHAMED A., ALI H. BAHKALI, E. B. GARETH JONES, et al. "Two new species of Kallichroma (Bionectriaceae, Hypocreales) from Saudi Arabian mangroves." Phytotaxa 260, no. 1 (2016): 66. http://dx.doi.org/10.11646/phytotaxa.260.1.7.

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During an ongoing study of marine fungi in Saudi Arabia, two undescribed Kallichroma species were recorded from decayed intertidal wood of Avicennia marina from two mangrove stands along the Red Sea coast and the Arabian Gulf coast in Saudi Arabia. Kallichroma asperum sp. nov. is characterized by rough ascospores cell walls surrounded by a granular sheath. Kallichroma ellipsoideum sp. nov. is characterized by its small sized hyaline ascomata, asci and ascospores. Both new species have 3 or 8-spored asci and perithecoid or confluent ascomata with large, globose papillae. Phylogenetic analyses of the combined SSU and LSU rDNA sequences placed the two new species in the family Bionectriaceae.

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20

Oh, Seung-Yoon. "The complete mitochondrial genome of Clonostachys farinosa (Bionectriaceae, Hypocreales)." Mitochondrial DNA Part B 9, no. 5 (2024): 583–87. http://dx.doi.org/10.1080/23802359.2024.2347510.

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21

Hirooka, Yuuri, Takao Kobayashi, Tsuyoshi Ono, Amy Y. Rossman, and Priscila Chaverri. "Verrucostoma, a new genus in the Bionectriaceae from the Bonin Islands, Japan." Mycologia 102, no. 2 (2010): 418–29. http://dx.doi.org/10.3852/09-137.

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22

Rossman, Amy Y., Keith A. Seifert, Gary J. Samuels, et al. "Genera in Bionectriaceae, Hypocreaceae, and Nectriaceae (Hypocreales) proposed for acceptance or rejection." IMA Fungus 4, no. 1 (2013): 41–51. http://dx.doi.org/10.5598/imafungus.2013.04.01.05.

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23

Khodosovtsev, Alexander, Jan Vondrák, Anna Naumovich, Jana Kocourková, Olga Vondráková, and Jurga Motiejnait. "Three new Pronectria species in terricolous and saxicolous microlichen communities (Bionectriaceae, Ascomycota)." Nova Hedwigia 95, no. 1 (2012): 211–20. http://dx.doi.org/10.1127/0029-5035/2012/0026.

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24

Wang, Zhi-Qin, Jing Zhao, Quan-Ying Dong, et al. "Multi-locus molecular phylogenetic analysis reveals two new species of Amphichorda (Bionectriaceae, Hypocreales)." MycoKeys 106 (July 3, 2024): 287–301. http://dx.doi.org/10.3897/mycokeys.106.117205.

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Amphichorda has been previously accepted as a member of the Cordycipitaceae and currently it is considered a member of the Bionectriaceae. The substrates of Amphichorda were complex and varied, being mainly animal faeces. This study reports two new species of Amphichorda from Yunnan Province in south-western China. Based on the five-gene (nrSSU, nrLSU, tef‐1α, rpb1 and rpb2) sequence and ITS data phylogenetic analysis, two new species, namely A. excrementa and A. kunmingensis, are proposed and a detailed description of the new species is provided. Amphichorda excrementa and A. kunmingensis were isolated from animal faeces in the park. The morphological characteristics of two novel species and seven known species in Amphichorda are also compared.

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von BRACKEL, Wolfgang, and Javier ETAYO. "Pronectria collematis (Bionectriaceae, Hypocreales), a new species on Collema from Germany and Spain." Lichenologist 42, no. 4 (2010): 361–64. http://dx.doi.org/10.1017/s0024282910000095.

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Plishka, Marcie J. R., Akihiko Tsuneda, and Randolph S. Currah. "Morphology and development of Nigrosabulum globosum, a cleistothecial coprophile in the Bionectriaceae (Hypocreales)." Mycological Research 113, no. 8 (2009): 815–21. http://dx.doi.org/10.1016/j.mycres.2009.02.005.

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Wang, Zhi-Qin, Jing Zhao, Quan-Ying Dong, et al. "Multi-locus molecular phylogenetic analysis reveals two new species of Amphichorda (Bionectriaceae, Hypocreales)." MycoKeys 106 (July 3, 2024): 287–301. https://doi.org/10.3897/mycokeys.106.117205.

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<i>Amphichorda</i> has been previously accepted as a member of the Cordycipitaceae and currently it is considered a member of the Bionectriaceae. The substrates of <i>Amphichorda</i> were complex and varied, being mainly animal faeces. This study reports two new species of <i>Amphichorda</i> from Yunnan Province in south-western China. Based on the five-gene (nr<i>SSU</i>, nr<i>LSU</i>, <i>tef‐1α</i>, <i>rpb1</i> and <i>rpb2</i>) sequence and ITS data phylogenetic analysis, two new species, namely <i>A. excrementa</i> and <i>A. kunmingensis</i>, are proposed and a detailed description of the new species is provided. <i>Amphichorda excrementa</i> and <i>A. kunmingensis</i> were isolated from animal faeces in the park. The morphological characteristics of two novel species and seven known species in <i>Amphichorda</i> are also compared.

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Zhang, Xiang-Min, and Wen-Ying Zhuang. "Re-examinations of Bionectriaceae and Nectriaceae (Hypocreales) from tropical China on deposit in HMAS." Nova Hedwigia 74, no. 1-2 (2002): 275–83. http://dx.doi.org/10.1127/0029-5035/2002/0074-0275.

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Zhang, Xiang-Min Zhuang. "Re-examinations of Bionectriaceae and Nectriaceae (Hypocreales) from temperate China on deposit in HMAS." Nova Hedwigia 76, no. 1-2 (2003): 191–200. http://dx.doi.org/10.1127/0029-5035/2003/0076-0191.

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30

Loguercio-Leite, Clarice, Larissa Trierveiler-Pereira, Alice Gerlach, Marisa Campos-Santana, Cecilia Cristina Carmaran, and Andrea Irene Romero. "Additional information on Mycocitrus aurantium (Bionectriaceae, Hypocreales), an unusual bamboo-inhabiting fungus found in South America." Biotemas 31, no. 1 (2018): 1–9. http://dx.doi.org/10.5007/2175-7925.2018v31n1p1.

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Mycocitrus Möller corresponde a um gênero tropical que contém duas espécies que formam grandes estromas em colmos de bambu. Durante um levantamento de macrofungos no estado de Santa Catarina foram coletados quatro espécimes de Mycocitrus aurantium Möller, uma espécie considerada rara por ter sido pouco citada na literatura. Os objetivos desse trabalho foram contribuir para o conhecimento sobre a morfologia da espécie, comunicar pela primeira vez a obtenção de cultura da espécie e discutir seu posicionamento filogenético com base em dados moleculares. Estudos morfológicos e filogenéticos foram conduzidos a partir de espécimes frescos e culturas. A filogenia apresentada foi construída com base na sequência do espaçador interno transcrito do DNA ribossomal (ITS). Atualmente, o gênero Mycocitrus é aceito na família Bionectriaceae (Hypocreales); entretanto, este posicionamento não se sustenta quando apenas os caracteres morfológicos são levados em consideração.

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Lytvynenko, YuI. "Selinia pulchra (G. Winter) Sacc. (Bionectriaceae, Ascomycota): a new genus and species record for Ukraine." Current Research in Environmental & Applied Mycology 10, no. 1 (2020): 26–33. http://dx.doi.org/10.5943/cream/10/1/3.

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Pirogov, N. V. "Two new for mycobiots of Ukraine species lichenicolous fungi from families Nectriaceae and Bionectriaceae (Hypocreales, Ascomycota)." Studia Biologica 6, no. 1 (2012): 195–200. http://dx.doi.org/10.30970/sbi.0601.183.

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Zeng, Z. Q., and W. Y. Zhuang. "Discovery of a second species of Hyalocylindrophora and the phylogenetic position of the genus in Bionectriaceae." Mycologia 110, no. 5 (2018): 941–47. http://dx.doi.org/10.1080/00275514.2018.1507371.

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Perera, R. H., K. D. Hyde, E. B. G. Jones, et al. "Profile of Bionectriaceae, Calcarisporiaceae, Hypocreaceae, Nectriaceae, Tilachlidiaceae, Ijuhyaceae fam. nov., Stromatonectriaceae fam. nov. and Xanthonectriaceae fam. nov." Fungal Diversity 118, no. 1 (2023): 95–271. http://dx.doi.org/10.1007/s13225-022-00512-1.

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Lechat, Christian, and Jacques Fournier. "Two new species of Lasionectria (Bionectriaceae, Hypocreales) from Guadeloupe and Martinique (French West Indies)." Mycotaxon 121, no. 1 (2013): 275–80. http://dx.doi.org/10.5248/121.275.

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Radiastuti, N., M. J. Suryani, D. N. Susilowati, R. Purnamaningsih, and K. Mulya. "The diversity of endophitic fungi on Annua mutant plantation (Artemisia annua L.) based on ITS rDNA marker." IOP Conference Series: Earth and Environmental Science 976, no. 1 (2022): 012038. http://dx.doi.org/10.1088/1755-1315/976/1/012038.

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Abstract Artemisia annua is a plant that produces artemisinin which is an antimalarial compound. The production of artemisinin compounds is influenced by the interaction of endophytic molds with their host plants. This study was conducted to identify endophytic molds found in plant tissues of A. annua which previously had been treated by mutations with Ethyl metahnesulfonate (EMS) to increase artemisinin production levels. Identification was carried out by using BLAST analysis, while the phylogenetic tree analysis used the minimum evolution (ME) method on MEGA 7 and the maximum parsimony (MP) method on PAUP 4.0b10. Phylogenetic analysis used noncoding sequences of the Internal Transcribe Spacer (ITS) rDNA region. Twelve endophytic molds (8 isolates from leaves, 2 isolates from stems, 1 isolate from petioles, and 1 isolate from flowers) in the Biogen Culture collection. This study identified to the species level phylogenetically. The endophytic molds identified were dominated by the Sordariomycetes group. It consist of 4 species, such as Clonostachys rosea, Fusarium oxysporum, Microascus gracillis, and Scopulariopsis brevicaulis, and another species belonging to the Eurotiomycetes group, is Aspergillus sydowii. A total of 4 families were obtained, such as Nectriaceae, Bionectriaceae, Microascaceae, and Aspergillaceae. All acquired classes belong to the Ascomycota division.

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Raymundo, Tania, Efraín Escudero-Leyva, Ricardo Soto-Agudelo, Jesus García-Jiménez, Leticia Romero-Bautista, and Ricardo Valenzuela. "Nuevos registros de Hypocreales (Sordariomycetes, Ascomycota) del bosque mesófilo de montaña de la Sierra Alta Hidalguense en México." Acta Botanica Mexicana, no. 120 (July 5, 2017): 39–57. http://dx.doi.org/10.21829/abm120.2017.1263.

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Antecedentes y Objetivos: El orden Hypocreales se distribuye ampliamente en las regiones templadas y tropicales del mundo. Se han registrado 17 especies en el bosque mesófilo de montaña para México. El objetivo de este estudio es ampliar el conocimiento taxonómico de las especies de Hypocreales en México y en particular de la Sierra Alta Hidalguense.Métodos: Fueron realizadas cinco exploraciones en la Sierra Alta Hidalguense entre 2011 y 2014. Fueron recolectadas ocho especies y se describieron morfológicamente siguiendo las técnicas tradicionales micológicas.Resultados clave: Se citan por primera vez siete especies de Hypocreales para México. Bionectria grammicospora pertenece a la familia Bionectriaceae; Hypomyces boletiphagus a Hypocreaceae, Sarcopodium flavolanatum, Thelonectria ostrina, T. veuillotiana y Viridispora alata a Nectriaceae y Valetoniella pauciornata a Niessliaciaceae. Bionectria ochroleuca se registra por vez primera para el bosque mesófilo de montaña en el estado de Hidalgo. Se presentan descripciones taxonómicas e ilustraciones de las ocho especies.Conclusiones: Los bosques mesófilos de montaña de México son ecosistemas con alta diversidad de especies y el orden Hypocreales no es la excepción, por lo que es necesario continuar realizando exploraciones y estudios taxonómicos de este grupo de hongos en este tipo de vegetación.

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He, Shucheng, Vinodhini Thiyagaraja, Chitrabhanu S. Bhunjun, et al. "Morphology and multi-gene phylogeny reveal three new species of Clonostachys and two combinations of Sesquicillium (Bionectriaceae, Hypocreales) from Xizang, China." MycoKeys 115 (March 11, 2025): 43–66. https://doi.org/10.3897/mycokeys.115.139757.

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Clonostachys and Sesquicillim are genera in Bionectriaceae, and known in sexual perithecial ascomata and hyphomycetous asexual morphs. In their asexual morph, both genera share similar morphology in conidiophores and conidiogenous cell characteristics but differ in the development of conidiophores. The members of Clonostachys are distributed worldwide with the majority occurring in the tropics and the species are commonly reported as soil-borne fungi but also reported as endophytes, epiphytes, and saprotrophs. During a microfungi survey in Xizang, China, six collections of fresh and healthy Ageratina adenophora and Houttuynia cordata leaves were obtained. The taxonomy of these collections was investigated through a combination of morphological analysis and multigene phylogenetic analysis using Maximum likelihood and Bayesian inference. The newly generated sequences were clustered within Clonostachys and Sesquicillium, showing hyphomycetes asexual morph. The results revealed three new Clonostachys species viz, Clonostachys linzhiensis, C. motuoensis, and C. yadongensis. This research sheds light on the overlooked fungal diversity in Xizang, China, expanding the known fungal biodiversity in the region. Additionally, two new combinations, Sesquicillium aquaticum and S. shanghaiense for C. aquatica and C. shanghaiensis, and one synonymy, C. viticola for C. swietenia are established, respectively.

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Zhao, Zhiyuan, Kongfu Zhu, Dexiang Tang, et al. "Comparative Analysis of Mitochondrial Genome Features among Four Clonostachys Species and Insight into Their Systematic Positions in the Order Hypocreales." International Journal of Molecular Sciences 22, no. 11 (2021): 5530. http://dx.doi.org/10.3390/ijms22115530.

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The mycoparasite fungi of Clonostachys have contributed to the biological control of plant fungal disease and nematodes. The Clonostachys fungi strains were isolated from Ophiocordyceps highlandensis, Ophiocordycepsnigrolla and soil, which identified as Clonostachyscompactiuscula, Clonostachysrogersoniana, Clonostachyssolani and Clonostachys sp. To explore the evolutionary relationship between the mentioned species, the mitochondrial genomes of four Clonostachys species were sequenced and assembled. The four mitogenomes consisted of complete circular DNA molecules, with the total sizes ranging from 27,410 bp to 42,075 bp. The GC contents, GC skews and AT skews of the mitogenomes varied considerably. Mitogenomic synteny analysis indicated that these mitogenomes underwent gene rearrangements. Among the 15 protein-coding genes within the mitogenomes, the nad4L gene exhibited the least genetic distance, demonstrating a high degree of conservation. The selection pressure analysis of these 15 PCGs were all below 1, indicating that PCGs were subject to purifying selection. Based on protein-coding gene calculation of the significantly supported topologies, the four Clonostachys species were divided into a group in the phylogenetic tree. The results supplemented the database of mitogenomes in Hypocreales order, which might be a useful research tool to conduct a phylogenetic analysis of Clonostachys. Additionally, the suitable molecular marker was significant to study phylogenetic relationships in the Bionectriaceae family.

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FARKAS, EDIT, and ADAM FLAKUS. "Trichonectria calopadiicola sp. nov. (Hypocreales, Ascomycota): the second species of the family Bionectriaceae parasitic on foliicolous lichens discovered in Tanzania." Phytotaxa 278, no. 3 (2016): 281. http://dx.doi.org/10.11646/phytotaxa.278.3.8.

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Trichonectria calopadiicola, a new lichenicolous fungus from tropical Africa is described. The species is the second member of nectrioid fungi known as parasitic on foliicolous lichens. It is characterized by often aggregated, dark reddish brown, subglobose, richly setose perithecia, covered by obtuse, septate, thick-walled setae, and by hyaline, narrowly fusiform, 1-septate ascospores. The mycoparasite causes evident damages in the ascomata of its host.

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He, Shucheng, Vinodhini Thiyagaraja, Chitrabhanu S. Bhunjun, et al. "Morphology and multi-gene phylogeny reveal three new species of Clonostachys and two combinations of Sesquicillium (Bionectriaceae, Hypocreales) from Xizang, China." MycoKeys 115 (March 11, 2025): 43–66. https://doi.org/10.3897/mycokeys.115.139757.

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<i>Clonostachys</i> and <i>Sesquicillium</i> are genera in Bionectriaceae, and known in sexual perithecial ascomata and hyphomycetous asexual morphs. In their asexual morph, both genera share similar morphology in conidiophores and conidiogenous cell characteristics but differ in the development of conidiophores. The members of <i>Clonostachys</i> are distributed worldwide with the majority occurring in the tropics and the species are commonly reported as soil-borne fungi but also reported as endophytes, epiphytes, and saprotrophs. During a microfungi survey in Xizang, China, six collections of fresh and healthy <i>Ageratina adenophora</i> and <i>Houttuynia cordata</i> leaves were obtained. The taxonomy of these collections was investigated through a combination of morphological analysis and multigene phylogenetic analysis using Maximum likelihood and Bayesian inference. The newly generated sequences were clustered within <i>Clonostachys</i> and <i>Sesquicillium</i>, showing hyphomycetes asexual morph. The results revealed three new <i>Clonostachys</i> species viz, <i>Clonostachys linzhiensis</i>, <i>C. motuoensis</i>, and <i>C. yadongensis</i>. This research sheds light on the overlooked fungal diversity in Xizang, China, expanding the known fungal biodiversity in the region. Additionally, two new combinations, <i>Sesquicillium aquaticum</i> and <i>S. shanghaiense</i> for <i>C. aquatica</i> and <i>C. shanghaiensis</i>, and one synonymy, <i>C. viticola</i> for <i>C. swietenia</i> are established, respectively.

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LIU, RUI-MENG, RUI-FANG XU, ABDALLAH M. ELGORBAN, et al. "Morphology and multigene phylogeny unveil Waltergamsia xishuangbannaensis sp. nov. (Bionectriaceae, Hypocreales), associated with Pará rubber (Hevea brasiliensis) from Yunnan Province, China." Phytotaxa 682, no. 2 (2025): 138–50. https://doi.org/10.11646/phytotaxa.682.2.2.

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During a survey of fungi associated with Pará rubber (Hevea brasiliensis) in Xishuangbanna, Yunnan Province, fungal masses that grew on old rubber latex were collected and isolated. Based on DNA sequences of the internal transcribed spacer ribosomal RNA locus (ITS), the nuclear ribosomal large subunit (LSU), partial translation elongation factor 1-alpha (tef1-α), and RNA polymerase II subunit 2 (rpb2) genes, coupled with morphological characteristics, the isolated fungal strains were identified as a novel fungal species, Waltergamsia xishuangbannaensis. A description, illustrations, and phylogenetic analysis results of the new species are presented. In addition, the new species is compared with closely related taxa.

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Wang, Hai-Yan, Chunbo Dong, Yan-Wei Zhang, Wan-Hao Chen, and Yan-Feng Han. "Biconidium sinense gen. et sp. nov. (Hypocreales, Bionectriaceae) and Didymocyrtis shanxiensis sp. nov. (Phaeosphaeriaceae, Didymocyrtis) isolated from urban soil in China." MycoKeys 116 (April 29, 2025): 327–44. https://doi.org/10.3897/mycokeys.116.146683.

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During a fungal diversity survey in various urban habitats across China, 5 fungal isolates were discovered from soil samples. Detailed morphological observations and multi-gene phylogenetic analyses confirmed the identification of two novel taxa: Biconidium sinensegen. et sp. nov. and Didymocyrtis shanxiensissp. nov. These species were formally described, illustrated, and discussed, highlighting their distinct characteristics and taxonomic placement. The study expands our understanding of fungal diversity in urban environments, emphasizing the importance of combining morphological and molecular approaches for accurate species delineation and discovery.

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Wang, Hai-Yan, Chunbo Dong, Yan-Wei Zhang, Wan-Hao Chen, and Yan-Feng Han. "Biconidium sinense gen. et sp. nov. (Hypocreales, Bionectriaceae) and Didymocyrtis shanxiensis sp. nov. (Phaeosphaeriaceae, Didymocyrtis) isolated from urban soil in China." MycoKeys 116 (April 29, 2025): 327–44. https://doi.org/10.3897/mycokeys.116.146683.

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During a fungal diversity survey in various urban habitats across China, 5 fungal isolates were discovered from soil samples. Detailed morphological observations and multi-gene phylogenetic analyses confirmed the identification of two novel taxa: <i>Biconidium sinense</i> gen. et sp. nov. and <i>Didymocyrtis shanxiensis</i> sp. nov. These species were formally described, illustrated, and discussed, highlighting their distinct characteristics and taxonomic placement. The study expands our understanding of fungal diversity in urban environments, emphasizing the importance of combining morphological and molecular approaches for accurate species delineation and discovery.

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Chen, Wan-Hao, Dan Li, Yan-Jun Wei, Jian-Dong Liang, and Yan-Feng Han. "Ovicillium sinense, a new species from Guizhou, China." Phytotaxa 662, no. 2 (2024): 195–200. https://doi.org/10.11646/phytotaxa.662.2.8.

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Chen, Wan-Hao, Li, Dan, Wei, Yan-Jun, Liang, Jian-Dong, Han, Yan-Feng (2024): Ovicillium sinense, a new species from Guizhou, China. Phytotaxa 662 (2): 195-200, DOI: 10.11646/phytotaxa.662.2.8, URL: https://doi.org/10.11646/phytotaxa.662.2.8

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Blood, B. L., W. E. Klingeman, M. A. Paschen, Đ. Hadžiabdić, J. J. Couture, and M. D. Ginzel. "Behavioral Responses of Pityophthorus juglandis (Coleoptera: Curculionidae: Scolytinae) to Volatiles of Black Walnut and Geosmithia morbida (Ascomycota: Hypocreales: Bionectriaceae), the Causal Agent of Thousand Cankers Disease." Environmental Entomology 47, no. 2 (2018): 412–21. http://dx.doi.org/10.1093/ee/nvx194.

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Pecundo, Melissa H., Aimee Caye G. Chang, Tao Chen, Thomas Edison E. dela Cruz, Hai Ren, and Nan Li. "Full-Length 16S rRNA and ITS Gene Sequencing Revealed Rich Microbial Flora in Roots of Cycas spp. in China." Evolutionary Bioinformatics 17 (January 2021): 117693432198971. http://dx.doi.org/10.1177/1176934321989713.

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Cycads have developed a complex root system categorized either as normal or coralloid roots. Past literatures revealed that a great diversity of key microbes is associated with these roots. This recent study aims to comprehensively determine the diversity and community structure of bacteria and fungi associated with the roots of two Cycas spp. endemic to China, Cycas debaoensis Zhong & Chen and Cycas fairylakea D.Y. Wang using high-throughput amplicon sequencing of the full-length 16S rRNA (V1-V9 hypervariable) and short fragment ITS region. The total DNA from 12 root samples were extracted, amplified, sequenced, and analyzed. Resulting sequences were clustered into 61 bacteria and 2128 fungal OTUs. Analysis of community structure revealed that the coralloid roots were dominated mostly by the nitrogen-fixer Nostocaceae but also contain other non-diazotrophic bacteria. The sequencing of entire 16S rRNA gene identified four different strains of cyanobacteria under the heterocystous genera Nostoc and Desmonostoc. Meanwhile, the top bacterial families in normal roots were Xanthobacteraceae, Burkholderiaceae, and Bacillaceae. Moreover, a diverse fungal community was also found in the roots of cycads and the predominating families were Ophiocordycipitaceae, Nectriaceae, Bionectriaceae, and Trichocomaceae. Our results demonstrated that bacterial diversity in normal roots of C. fairylakea is higher in richness and abundance than C. debaoensis. On the other hand, a slight difference, albeit insignificant, was noted for the diversity of fungi among root types and host species as the number of shared taxa is relatively high (67%). Our results suggested that diverse microbes are present in roots of cycads which potentially interact together to support cycads survival. Our study provided additional knowledge on the microbial diversity and composition in cycads and thus expanding our current knowledge on cycad-microbe association. Our study also considered the possible impact of ex situ conservation on cyanobiont community of cycads.

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Cannon, P. F. "A Monograph of Bionectria (Ascomycota, Hypocreales, Bionectriaceae) and its Clonostachys Anamorphs by Hans-Josef Schroers (2001). Studies in Mycology 46. Pp. 214. ISBN 90-70351-44-750 (softback). Centraalbureau voor Schimmelcultures, Utrecht, The Netherlands. Price A50." Mycologist 17, no. 2 (2003): 73. http://dx.doi.org/10.1017/s0269915x03272177.

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Davydenko, K. V., and I. M. Ustsky. "Shift in fungal communities associated with Pinus sylvestris stands affected by root rot." Forestry and Forest Melioration, no. 142 (June 29, 2023): 136–46. http://dx.doi.org/10.33220/1026-3365.142.2023.136.

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Introduction Scots pine (Pinus sylvestris) covers large areas in European regions with significant economic importance to Ukrainian forest industry. Root rot caused by the wood-decay fungus Heterobasidion annosum damages both below- and above-ground parts of Scots pines. The disease progress is likely to be affected by reshaping in the forest such as soil properties, vegetation composition, and tree age. These changes are apparently followed up by paralleled shifts in fungal community composition on forest soil with potential feedback on ecosystem functioning. The objective of the study was to screen fungal groups associated with the root system of P. sylvestris in stands affected by H.annosum s.s. to better understand the pathogenesis and development of root rot infection, as well as to recognize whether root size and disease severity affect diversity of fungi of the root system in the forest-steppe conditions of Ukraine. The additional object was to study other resident microflora of P. sylvestris root infested by H.annosum s.s. to find out whether the H. annosum s.s. impacts the overall diversity of other fungi. Materials and Methods The field study was carried out in 2018–2020. Field study sites were pure pine forest stands located in Kharkiv region (compartment 126, subcompartment 7, tract Bugri, Kharkiv Forest Research Station). Wood core and root samples from P. sylvestris were collected from the five infected (50–100 m apart from each other) and five non-infected trees (up to 500 m apart from the infested area and 50–100 m apart from each other). Wood and root samples were used for fungal culturing and direct sequencing using ITS1F and ITS4 primers. Results In the present study, we tried to evaluate fungal communities across diseased Pinus sylvestris stands and investigated correlations between taxonomic composition and forest health. Not surprisingly, root rot infestation had a significant effect on root-associated fungal abundance and diversity. During disease development, the root-associated fungal community shifted in composition from dominance by saprotrophic fungi to ectomycorrhizal and pathogenic fungal species. Our results suggested that maintenance of functional diversity in the root-associated fungal community may sustain long-term forest health or even root rot resistance to some extent by retaining a capacity for symbiosis-driven recycling of organic nutrients; however, this hypothesis is necessary to carefully examine and prove further. Conclusions Fungal culturing from 10 surface-sterilized wood cores resulted in 21 fungal cultures, 2.1 per wood segment. Direct sequencing from 40 surface-sterilized segments of lateral roots resulted in 247 fungal sequences or 6.2 per root segment on average. The most dominant fungi from the infested trees of Pinus sylvestris were Dactylonectria macrodidyma (4.98%), Acremonium sp (4.52%), Cladosporium cladosporioides (4.07%) from Ascomycota and Heterobasidion annosum s.s. (4.07%) from Basidiomycota, while for non-infested group Unidentified Ascomycota175244 (13.19%), Penicillium spinulosum (9.89%), Acremonium sp. (8.79%), Bionectriaceae sp. (8.79%) were the most common. 2 Figs., 2 Tables, 32 Refs.

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Melo, Roger Fagner Ribeiro, Leonor Costa Maia, and Andrew Nicholas Miller. "Coprophilous ascomycetes with passive ascospore liberation from Brazil." Phytotaxa 295, no. 2 (2017): 159–72. https://doi.org/10.11646/phytotaxa.295.2.4.

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Melo, Roger Fagner Ribeiro, Maia, Leonor Costa, Miller, Andrew Nicholas (2017): Coprophilous ascomycetes with passive ascospore liberation from Brazil. Phytotaxa 295 (2): 159-172, DOI: 10.11646/phytotaxa.295.2.4, URL: http://dx.doi.org/10.11646/phytotaxa.295.2.4

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