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Relevant bibliographies by topics / Bovine; Genome

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Academic literature on the topic 'Bovine; Genome'

Author: Grafiati

Published: 4 June 2021

Last updated: 1 February 2022

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Journal articles on the topic "Bovine; Genome"

1

Zorc, Minja, Jernej Ogorevc, and Peter Dovc. "The new bovine reference genome assembly provides new insight into genomic organization of the bovine major histocompatibility complex." Journal of Central European Agriculture 20, no. 4 (2019): 1111–15. http://dx.doi.org/10.5513/jcea01/20.4.2679.

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Jiang, Zhihua, Jenna S. Melville, Honghe Cao, Sudhir Kumar, Alan Filipski, and Ann M. Verrinder Gibbins. "Measuring conservation of contiguous sets of autosomal markers on bovine and porcine genomes in relation to the map of the human genome." Genome 45, no. 4 (2002): 769–76. http://dx.doi.org/10.1139/g02-038.

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Based on published information, we have identified 991 genes and gene-family clusters for cattle and 764 for pigs that have orthologues in the human genome. The relative linear locations of these genes on human sequence maps were used as "rulers" to annotate bovine and porcine genomes based on a CSAM (contiguous sets of autosomal markers) approach. A CSAM is an uninterrupted set of markers in one genome (primary genome; the human genome in this study) that is syntenic in the other genome (secondary genome; the bovine and porcine genomes in this study). The analysis revealed 81 conserved synten

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Tellam, Ross L., Danielle G. Lemay, Curtis P. Van Tassell, Harris A. Lewin, Kim C. Worley, and Christine G. Elsik. "Unlocking the bovine genome." BMC Genomics 10, no. 1 (2009): 193. http://dx.doi.org/10.1186/1471-2164-10-193.

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Fries, Ruedi, Andr� Eggen, and James E. Womack. "The bovine genome map." Mammalian Genome 4, no. 8 (1993): 405–28. http://dx.doi.org/10.1007/bf00296815.

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Womack, J. E. "The impact of sequencing the bovine genome." Australian Journal of Experimental Agriculture 46, no. 2 (2006): 151. http://dx.doi.org/10.1071/ea05229.

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Sequencing the bovine genome is the culmination of more than a decade of international collaboration to bring together resources to chart the genome of an economically important and biologically interesting species. Although considerable sequence is available at the publication of these proceedings, much work remains in annotation of the genome and the discovery of DNA polymorphisms within and between breeds. Nonetheless, the public availability of this sequence has already enhanced our ability to identify genes underlying phenotypes and to understand evolutionary relationships with other mamm

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Delhon, G., M. P. Moraes, Z. Lu, et al. "Genome of Bovine Herpesvirus 5." Journal of Virology 77, no. 19 (2003): 10339–47. http://dx.doi.org/10.1128/jvi.77.19.10339-10347.2003.

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ABSTRACT Here we present the complete genomic sequence of bovine herpesvirus 5 (BHV-5), an alphaherpesvirus responsible for fatal meningoencephalitis in cattle. The 138,390-bp genome encodes 70 putative proteins and resembles the α2 subgroup of herpesviruses in genomic organization and gene content. BHV-5 is very similar to BHV-1, the etiological agent of infectious bovine rhinotracheitis, as reflected by the high level of amino acid identity in their protein repertoires (average, 82%). The highest similarity to BHV-1 products (≥95% amino acid identity) is found in proteins involved in viral D

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Panzitta, Francesca, Andrea Caprera, Ivan Merelli, et al. "Mining the Bovine Genome with the “Bovine SNP Retriever”." Journal of Heredity 99, no. 6 (2008): 696–98. http://dx.doi.org/10.1093/jhered/esn044.

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Ajayi, Oyeyemi O., Sunday O. Peters, Marcos De Donato, et al. "Computational genome-wide identification of heat shock protein genes in the bovine genome." F1000Research 7 (September 20, 2018): 1504. http://dx.doi.org/10.12688/f1000research.16058.1.

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Background: Heat shock proteins (HSPs) are molecular chaperones known to bind and sequester client proteins under stress. Methods: To identify and better understand some of these proteins, we carried out a computational genome-wide survey of the bovine genome. For this, HSP sequences from each subfamily (sHSP, HSP40, HSP70 and HSP90) were used to search the Pfam (Protein family) database, for identifying exact HSP domain sequences based on the hidden Markov model. ProtParam tool was used to compute potential physico-chemical parameters detectable from a protein sequence. Evolutionary trace (ET

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Dalrymple, B. P. "Harnessing the bovine genome sequence for the Australian cattle and sheep industries." Australian Journal of Experimental Agriculture 45, no. 8 (2005): 1011. http://dx.doi.org/10.1071/ea05043.

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Genomics is an emerging science and the release of the human and mouse genomes has significantly altered our picture of the information content of mammalian genomes. A smaller number of protein coding genes, and a larger number of genes that do not appear to encode protein products, the so-called non-coding RNAs (ncRNAs), have been identified. The first 2 drafts of the bovine genome sequence have been released, and work to utilise the framework of the bovine genome to facilitate ovine genomics is underway. In anticipation of the requirement for a detailed analysis of the ruminant genomes, thei

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Fries, R., A. Eggen, and G. Stranzinger. "The bovine genome contains polymorphic microsatellites." Genomics 8, no. 2 (1990): 403–6. http://dx.doi.org/10.1016/0888-7543(90)90301-a.

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Dissertations / Theses on the topic "Bovine; Genome"

1

Salih, Hanni. "An updated object oriented bovine QTL viewer and genome-wide bovine meta-analysis." [College Station, Tex. : Texas A&M University, 2008. http://hdl.handle.net/1969.1/ETD-TAMU-2969.

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Earle, John Alexander Philip. "The nucleotide sequence of a bovine enterovirus genome." Thesis, Queen's University Belfast, 1987. http://ethos.bl.uk/OrderDetails.do?uin=uk.bl.ethos.317112.

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Küffer, Jürg. "Genome scan for the hereditary disease bovine dilated cardiomyopathy /." [S.l.] : [s.n.], 2001. http://www.ub.unibe.ch/content/bibliotheken_sammlungen/sondersammlungen/dissen_bestellformular/index_ger.html.

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Byrne, Annette Therese. "Analysis of apoptosis in the preimplantation mammalian embryo." Thesis, University of York, 1999. http://ethos.bl.uk/OrderDetails.do?uin=uk.bl.ethos.310908.

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Utsunomiya, Yuri Tani. "Genome-wide scans to uncover loci underlying bovine reproductive biology /." Jaboticabal, 2013. http://hdl.handle.net/11449/98165.

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Orientador: José Fernando Garcia<br>Coorientador: Johann Sölkner<br>Banca: Joaquim Mansano Garcia<br>Banca: Adriana Santana do Carmo<br>Resumo: O desempenho reprodutivo dos animais tem um grande impacto sobre a indústria da carne bovina. A caracterização de regiões genômicas que afetam a fertilidade dos animais pode contribuir para a identificação de marcadores preditivos de desempenho reprodutivo e desvendar os mecanismos moleculares envolvidos em aspectos complexos da biologia reprodutiva dos bovinos. Nos dois primeiros estudos relatados, os genomas de touros da raça Nelore (Bos indicus) for

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Utsunomiya, Yuri Tani [UNESP]. "Genome-wide scans to uncover loci underlying bovine reproductive biology." Universidade Estadual Paulista (UNESP), 2013. http://hdl.handle.net/11449/98165.

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Made available in DSpace on 2014-06-11T19:29:15Z (GMT). No. of bitstreams: 0 Previous issue date: 2013-12-16Bitstream added on 2014-06-13T20:19:14Z : No. of bitstreams: 1 000748821.pdf: 4613414 bytes, checksum: 5df263a22daac5758702e6a97e66c980 (MD5)<br>O desempenho reprodutivo dos animais tem um grande impacto sobre a indústria da carne bovina. A caracterização de regiões genômicas que afetam a fertilidade dos animais pode contribuir para a identificação de marcadores preditivos de desempenho reprodutivo e desvendar os mecanismos moleculares envolvidos em aspectos complexos da biologia rep

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Shull, Bruce Colin. "Molecular cloning and analysis of the genome of bovine parvovirus." Diss., Virginia Polytechnic Institute and State University, 1987. http://hdl.handle.net/10919/49895.

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The genome of bovine parvovirus (BPV) has been cloned by blunt end ligation of double-stranded virion DNA into the plasmid pUC8. The resulting genomic clones were infectious after transfection into bovine fetal lung (BFL) cells. Sequencing of the plasmids demonstrated that deletions were common at both ends of the cloned BPV genome. Deletions of up to 34 bases at the 3’ end lowered but did not abolish infectivity, while a deletion of 52 bases eliminated infectivity, End label analysis demonstrated the repair of deletions of up to 34 bases at the 3’ end or 35 bases at the 5’ end to the wild typ

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Walker, Caroline Gwendolyn. "Genome-wide transcriptional and DNA methylation profiling of the bovine endometrium." Thesis, University of Auckland, 2012. http://hdl.handle.net/2292/19432.

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The aim of this research was to identify key molecular mechanisms regulating early pregnancy events in dairy cattle. Genome-wide gene expression and DNA methylation profiles were characterised in the endometrium of fertile and sub-fertile dairy cows at day 17 of pregnancy and the oestrous cycle. Gene expression data in combination with QTL data was then used to identify candidate genes for genetic analysis. The results of this study identified several biological processes likely to be important contributors to pregnancy success. In particular, genes classified as having roles in immune r

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Deng, Ruitang. "Molecular cloning, nucleotide sequencing and genome replication of bovine viral diarrhea virus /." The Ohio State University, 1992. http://rave.ohiolink.edu/etdc/view?acc_num=osu1487779914825349.

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Shariat, Parvaneh. "Use of tRNA Gene Probes to Identify Polymorphic Loci in the Bovine Genome." Thesis, University of North Texas, 1998. https://digital.library.unt.edu/ark:/67531/metadc278338/.

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A 30-mer oligonucleotide probe encoding the "A box" and anticodon loop regions of a human glycine tRNA gene was used to isolate a 581bp DNA fragment from a bovine genomic DNA library. Although the cross-hybridizing segment of DNA was found not to encode any tRNA gene or pseudogene, a region with homology to the "C-element" of the "BOV-tA" type Alulike artiodactyl retroposons was identified. This cross-hybridization was determined to be the result of conserved RNA polymerase III promoter elements in the probe portion of the tRNA gene and these repetitive elements. A microsatellite repeat (TC) w

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Books on the topic "Bovine; Genome"

1

Womack, James E. Bovine genomics. Wiley-Blackwell, 2012.

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Bovine genomics. Wiley-Blackwell, 2012.

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3

Flavin, Nora. Cloning and characterisation of the bovine activin receptor type II gene (ActRII): Its localisation to chromosome 2 (BTA2) by somatic cell genetic analysis and the genotyping of an associated microsatelltie UCD2. University College Dublin, 1996.

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4

Larson, Jean A. Biotechnology: Bovine somatotropin/growth hormone, January 1979-November 1988 : 204 citations. U.S. Dept. of Agriculture, National Agricultural Library, 1989.

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Trautwein-Fritz, Katrin. Construction of an improved expression system for bovine pancreatic ribonuclease A and construction and characterization of RNase A mutants. Hartung-Gorre, 1992.

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6

Bovine genome: Mapping and trypanotolerance : proceedings of a workshop held at ILRAD, Nairobi, Kenya, 9-11 April 1991. International Laboratory for Research on Animal Diseases, 1991.

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7

Draker, Ryan. Molecular characterization of the bovine torovirus: The complete sequence and cloning of the Breda-1 virus genome. 2004.

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8

Hope, James, and Mark P. Dagleish. Prion-protein-related diseases of animals and man. Oxford University Press, 2011. http://dx.doi.org/10.1093/med/9780198570028.003.0041.

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Scrapie, bovine spongiform encephalopathy (BSE), Creutzfeldt–Jakob disease (CJD), and related diseases of mink (transmissible mink encephalopathy), mule deer and elk (chronic wasting disease) are the founder members of a group of diseases called the transmissible degenerative (or spongiform) encephalopathies (TSE). These diseases can be transmitted by prions from affected to healthy animals by inoculation or by feeding diseased tissues. Prions are cellular proteins that can transfer metabolic and pathological phenotypes vertically from parent to progeny or horizontally between cells and animal

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Book chapters on the topic "Bovine; Genome"

1

Adelson, David L. "Bovine Genome Architecture." In Bovine Genomics. Wiley-Blackwell, 2012. http://dx.doi.org/10.1002/9781118301739.ch10.

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Worley, Kim C., and Richard A. Gibbs. "Sequencing the Bovine Genome." In Bovine Genomics. Wiley-Blackwell, 2012. http://dx.doi.org/10.1002/9781118301739.ch9.

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Womack, James E. "Cartography of the Bovine Genome." In Bovine Genomics. Wiley-Blackwell, 2012. http://dx.doi.org/10.1002/9781118301739.ch5.

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Womack, J. E. "The Bovine Genome." In Vertebrate Genomes. KARGER, 2006. http://dx.doi.org/10.1159/000095095.

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McKay, Stephanie D., and Robert D. Schnabel. "History of Linkage Mapping the Bovine Genome." In Bovine Genomics. Wiley-Blackwell, 2012. http://dx.doi.org/10.1002/9781118301739.ch6.

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Goddard, M. E., and B. J. Hayes. "Genome-Wide Association Studies and Linkage Disequilibrium in Cattle." In Bovine Genomics. Wiley-Blackwell, 2012. http://dx.doi.org/10.1002/9781118301739.ch13.

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Rice, N. R., R. M. Stephens, and R. V. Gilden. "Sequence Analysis of the Bovine Leukemia Virus Genome." In Enzootic Bovine Leukosis and Bovine Leukemia Virus. Springer US, 1987. http://dx.doi.org/10.1007/978-1-4613-2341-9_9.

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Ghysdael, J., C. Bruck, R. Mamoun, and A. Burny. "Genetic Structure of Bovine Leukemia Virus Genome and Biosynthesis of Bovine Leukemia Virus Proteins." In Enzootic Bovine Leukosis and Bovine Leukemia Virus. Springer US, 1987. http://dx.doi.org/10.1007/978-1-4613-2341-9_8.

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Hagen, Darren E., Deepak R. Unni, Aditi Tayal, Gregory W. Burns, and Christine G. Elsik. "Bovine Genome Database: Tools for Mining the Bos taurus Genome." In Methods in Molecular Biology. Springer New York, 2018. http://dx.doi.org/10.1007/978-1-4939-7737-6_9.

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Imumorin, Ikhide G., Sunday O. Peters, and Marcos De Donato. "Genomic Imprinting and Imprinted Gene Clusters in the Bovine Genome." In Livestock Epigenetics. Wiley-Blackwell, 2011. http://dx.doi.org/10.1002/9781119949930.ch6.

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Conference papers on the topic "Bovine; Genome"

1

Mizeranschi, Alexandru E., Ciprian Valentin Mihali, Radu Ionel Neamt, Mihai Carabas, and Daniela Elena Ilie. "Distributed bioinformatics analyses on an SGE cluster, for variant calling on bovine whole-genome sequencing samples." In 2019 IEEE International Conference on Advanced Scientific Computing (ICASC). IEEE, 2019. http://dx.doi.org/10.1109/icasc48083.2019.8946283.

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Sun, Daqing, Xingguang Qu, Xiyan Han, et al. "Expression of Bovine Prochymosin Gene in Lactococcus Lactis." In 2009 3rd International Conference on Bioinformatics and Biomedical Engineering (iCBBE). IEEE, 2009. http://dx.doi.org/10.1109/icbbe.2009.5162832.

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METLEVA, Anastasia S., and Konstantin V. BESPOMESTNYKH. "Selection of Grna for Genomic Editing of the Bovine Leucosis Virus Susceptible Alleles of the 2 Exon of the Bola-DRB3 Gene by CRISPR/Cas9." In IV International Scientific and Practical Conference "Modern S&T Equipments and Problems in Agriculture". Sibac, 2020. http://dx.doi.org/10.32743/kuz.mepa.2020.148-157.

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Prastowo, Sigit, Nuzul Widyas, Adi Ratriyanto та Md Mahmodul Hasan Sohel. "In-silico identification of microRNAs potentially targeting the PGC1α gene that regulates bovine mitochondrial biogenesis". У Proceedings of the 17th International Conference on Ion Sources. Author(s), 2018. http://dx.doi.org/10.1063/1.5054423.

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Msdcalf, R. L., E. K. O. Kruithof, and W.-D. Schleuning. "TRANSIENT INDUCTION OF PLASMINOGEN ACTIVATOR INHIBITOR 2 (PAI-2) GENE TRANSCRIPTION BY THE TUMOUR PROMOTING PHORBOL ESTER PMA IN THE HUMAN MACROPHAGE-LIKE CELT, LINE U-937." In XIth International Congress on Thrombosis and Haemostasis. Schattauer GmbH, 1987. http://dx.doi.org/10.1055/s-0038-1642857.

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The human hematopoietic cell line U-937 differentiates to a macrophage/monocyte phenotype after exposure to the tumour promoter PMA. We have recently shown that PMA concomitantly induces PAI-2 biosynthesis in these cells. Now, we have employed an 1880 base pair cDNA to study PAI-2 biosynthesis on the level of transcription and mRNA stability. By in vitro elongation of initiated PAI-2 transcripts in isolated nuclei in the presence of 32p-labelled UTP followed by hybridization to cloned DNA (“run-on” transcription assay), we have demonstrated that PAI-2 gene transcription rates are induced 50-fo

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L Ishak, Andi Baso, MIA Dagong, and P. Nurul. "Polymorphisms of Bovine Lymphocyte Antigen (BoLA DRB 3.2 Locus PstI) Gene in Bali Cattle Population from South Sulawesi Province." In Proceedings of International Seminar on Livestock Production and Veterinary Technology. Indonesian Center for Animal Science Research and Development (ICARD), 2017. http://dx.doi.org/10.14334/proc.intsem.lpvt-2016-p.19-23.

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Kuo, Be-Sheng, Gil Korner, and Thorir D. Bjornsson. "ROLE OF POLYAMINES IN THE REGULATION OF SYNTHESIS AND SECRETION OF PLASMINOGEN ACTIVATOR FROM BOVINE AORTIC ENDOTHELIAL CELLS." In XIth International Congress on Thrombosis and Haemostasis. Schattauer GmbH, 1987. http://dx.doi.org/10.1055/s-0038-1644655.

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The effects of three polyamines, putrescine (PUT), spermidine (SPD) and spermine (SPM), were investigated on the synthesis and secretion of plasminogen activator (PA) and antiactivator (PAI) activities in confluent bovine aortic endothelial cells. PA activity was determined bythe fibrin plate method, and individual species with PA and PAI activities were separated and visualized using SDS-PAGE with zymography and reverse fibrin autography. Both control cells and cells treated with polyamines secreted PA activity in a time-dependent fashion. After 24-hour incubation, the three polyamines enhanc

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TRUKHACHEV, Vladimir, Sergey OLEYNIK, Nikolay ZLYDNEV, and Vitaliy MOROZOV. "SCREENING OF COMPLEX VERTEBRAL MALFORMATION (CVM) AND BOVINE LEUKOCYTE ADHESION DEFICIENCY (BLAD) IN THE AYRSHIRE CATTLE BREED IN THE NORTH CAUCASUS." In RURAL DEVELOPMENT. Aleksandras Stulginskis University, 2018. http://dx.doi.org/10.15544/rd.2017.142.

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The Ayrshire dairy breed is renowned for producing large quantities of high quality milk and, therefore, is frequently used for crossbreeding. However, various hereditary anomalies caused by gene mutations have been recently recorded in calves produced by some Ayrshire sires. Most of these anomalies were shown to have a recessive inheritance pattern, thus imposing a threat of unpredictable dramatic changes in cattle genotypes under such factors as genetic drift, selection and inbreeding. The purpose of this study was to examine the susceptibility of the Ayrshire cattle bred in the North Caucas

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Inoue, Shinnosuke, Woon-Hong Yeo, Jong-Hoon Kim, et al. "Amplification-Free DNA Detection Using a Microtip-Sensor Decorated With LNA Probes for Rapid TB Screening." In ASME 2011 International Mechanical Engineering Congress and Exposition. ASMEDC, 2011. http://dx.doi.org/10.1115/imece2011-64378.

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Tuberculosis (TB) is an epidemic affecting one-third of the world’s population, mostly in developing and low-resource settings. People having active pulmonary TB are considered highly infectious; therefore, it is critical to identify and treat these patients rapidly before spreading to others. However, the most reliable TB diagnostic methods of bacterial culture or nucleic acid amplification are time-consuming and expensive. The challenge of TB diagnosis lies in highly sensitive and specific screening with low cost. Here, we present an LNA-modified microtip-sensor, which is capable of selectiv

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Ploos van Amstel, J. K., A. L. van der Zanden, E. Bakker, P. H. Reitsma, and R. M. Bertina. "INDEPENDENT ISOLATION OF HUMAN PROTEIN S cDNA AND THE ASSIGNMENT OF THE GENE TO CHROMOSOME 3." In XIth International Congress on Thrombosis and Haemostasis. Schattauer GmbH, 1987. http://dx.doi.org/10.1055/s-0038-1644638.

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Protein S is a vitamin K-dependent glycoprotein, that serves as a cofactor of activated protein C. A hereditary deficiency in protein S is associated with an increased risk for the development of venous thrombosis. The deficiency is inherited as an autosomal dominant trait. We isolated a cDNA coding for protein S and assigned its gene to chromosome 3.A human liver cDNA library in phage xgtll (complexity 1.2 × 106 , D. Stafford, Chapel Hill) was screened by using immuno-purifiedpolyclonal anti-protein S IgG as a probe. Approximately 1.5 x 10 recombinants of the amplified library were screened.

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Reports on the topic "Bovine; Genome"

1

Mishra, Bishnu P., and James M. Reecy. Generation of Bovine Genetic Markers by Representational Difference Analysis: a genome subtraction technique. Iowa State University, 2004. http://dx.doi.org/10.31274/ans_air-180814-457.

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Steelman, Carissa A., Jacklyn K. Potts, and James M. Reecy. Characterization of Gene Expression in Double-Muscled and Normal-Muscled Bovine Embryos. Iowa State University, 2004. http://dx.doi.org/10.31274/ans_air-180814-448.

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Heo, Y., Y. Xu, X. Quan, Y. Seong, N. Kim, and J. Kim. CRISPR/Cas9 nuclease-mediated gene knock-in in bovine pluripotent stem cells and embryos. Cold Spring Harbor Laboratory, 2014. http://dx.doi.org/10.1101/005421.

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