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Journal articles on the topic 'Bovine; Genome'

Author: Grafiati

Published: 4 June 2021

Last updated: 1 February 2022

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1

Zorc, Minja, Jernej Ogorevc, and Peter Dovc. "The new bovine reference genome assembly provides new insight into genomic organization of the bovine major histocompatibility complex." Journal of Central European Agriculture 20, no. 4 (2019): 1111–15. http://dx.doi.org/10.5513/jcea01/20.4.2679.

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2

Jiang, Zhihua, Jenna S. Melville, Honghe Cao, Sudhir Kumar, Alan Filipski, and Ann M. Verrinder Gibbins. "Measuring conservation of contiguous sets of autosomal markers on bovine and porcine genomes in relation to the map of the human genome." Genome 45, no. 4 (2002): 769–76. http://dx.doi.org/10.1139/g02-038.

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Based on published information, we have identified 991 genes and gene-family clusters for cattle and 764 for pigs that have orthologues in the human genome. The relative linear locations of these genes on human sequence maps were used as "rulers" to annotate bovine and porcine genomes based on a CSAM (contiguous sets of autosomal markers) approach. A CSAM is an uninterrupted set of markers in one genome (primary genome; the human genome in this study) that is syntenic in the other genome (secondary genome; the bovine and porcine genomes in this study). The analysis revealed 81 conserved synten

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3

Tellam, Ross L., Danielle G. Lemay, Curtis P. Van Tassell, Harris A. Lewin, Kim C. Worley, and Christine G. Elsik. "Unlocking the bovine genome." BMC Genomics 10, no. 1 (2009): 193. http://dx.doi.org/10.1186/1471-2164-10-193.

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4

Fries, Ruedi, Andr� Eggen, and James E. Womack. "The bovine genome map." Mammalian Genome 4, no. 8 (1993): 405–28. http://dx.doi.org/10.1007/bf00296815.

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5

Womack, J. E. "The impact of sequencing the bovine genome." Australian Journal of Experimental Agriculture 46, no. 2 (2006): 151. http://dx.doi.org/10.1071/ea05229.

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Sequencing the bovine genome is the culmination of more than a decade of international collaboration to bring together resources to chart the genome of an economically important and biologically interesting species. Although considerable sequence is available at the publication of these proceedings, much work remains in annotation of the genome and the discovery of DNA polymorphisms within and between breeds. Nonetheless, the public availability of this sequence has already enhanced our ability to identify genes underlying phenotypes and to understand evolutionary relationships with other mamm

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6

Delhon, G., M. P. Moraes, Z. Lu, et al. "Genome of Bovine Herpesvirus 5." Journal of Virology 77, no. 19 (2003): 10339–47. http://dx.doi.org/10.1128/jvi.77.19.10339-10347.2003.

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ABSTRACT Here we present the complete genomic sequence of bovine herpesvirus 5 (BHV-5), an alphaherpesvirus responsible for fatal meningoencephalitis in cattle. The 138,390-bp genome encodes 70 putative proteins and resembles the α2 subgroup of herpesviruses in genomic organization and gene content. BHV-5 is very similar to BHV-1, the etiological agent of infectious bovine rhinotracheitis, as reflected by the high level of amino acid identity in their protein repertoires (average, 82%). The highest similarity to BHV-1 products (≥95% amino acid identity) is found in proteins involved in viral D

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7

Panzitta, Francesca, Andrea Caprera, Ivan Merelli, et al. "Mining the Bovine Genome with the “Bovine SNP Retriever”." Journal of Heredity 99, no. 6 (2008): 696–98. http://dx.doi.org/10.1093/jhered/esn044.

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8

Ajayi, Oyeyemi O., Sunday O. Peters, Marcos De Donato, et al. "Computational genome-wide identification of heat shock protein genes in the bovine genome." F1000Research 7 (September 20, 2018): 1504. http://dx.doi.org/10.12688/f1000research.16058.1.

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Background: Heat shock proteins (HSPs) are molecular chaperones known to bind and sequester client proteins under stress. Methods: To identify and better understand some of these proteins, we carried out a computational genome-wide survey of the bovine genome. For this, HSP sequences from each subfamily (sHSP, HSP40, HSP70 and HSP90) were used to search the Pfam (Protein family) database, for identifying exact HSP domain sequences based on the hidden Markov model. ProtParam tool was used to compute potential physico-chemical parameters detectable from a protein sequence. Evolutionary trace (ET

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9

Dalrymple, B. P. "Harnessing the bovine genome sequence for the Australian cattle and sheep industries." Australian Journal of Experimental Agriculture 45, no. 8 (2005): 1011. http://dx.doi.org/10.1071/ea05043.

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Genomics is an emerging science and the release of the human and mouse genomes has significantly altered our picture of the information content of mammalian genomes. A smaller number of protein coding genes, and a larger number of genes that do not appear to encode protein products, the so-called non-coding RNAs (ncRNAs), have been identified. The first 2 drafts of the bovine genome sequence have been released, and work to utilise the framework of the bovine genome to facilitate ovine genomics is underway. In anticipation of the requirement for a detailed analysis of the ruminant genomes, thei

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10

Fries, R., A. Eggen, and G. Stranzinger. "The bovine genome contains polymorphic microsatellites." Genomics 8, no. 2 (1990): 403–6. http://dx.doi.org/10.1016/0888-7543(90)90301-a.

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11

Childers, Christopher P., Justin T. Reese, Jaideep P. Sundaram, et al. "Bovine Genome Database: integrated tools for genome annotation and discovery." Nucleic Acids Research 39, suppl_1 (2010): D830—D834. http://dx.doi.org/10.1093/nar/gkq1235.

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12

Crysnanto, Danang, Alexander S. Leonard, Zih-Hua Fang, and Hubert Pausch. "Novel functional sequences uncovered through a bovine multiassembly graph." Proceedings of the National Academy of Sciences 118, no. 20 (2021): e2101056118. http://dx.doi.org/10.1073/pnas.2101056118.

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Many genomic analyses start by aligning sequencing reads to a linear reference genome. However, linear reference genomes are imperfect, lacking millions of bases of unknown relevance and are unable to reflect the genetic diversity of populations. This makes reference-guided methods susceptible to reference-allele bias. To overcome such limitations, we build a pangenome from six reference-quality assemblies from taurine and indicine cattle as well as yak. The pangenome contains an additional 70,329,827 bases compared to the Bos taurus reference genome. Our multiassembly approach reveals 30 and

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13

Sheikh, Faruk G., Sudit S. Mukhopadhyay, and Prabhakar Gupta. "PstI repeat: a family of short interspersed nucleotide element (SINE)-like sequences in the genomes of cattle, goat, and buffalo." Genome 45, no. 1 (2002): 44–50. http://dx.doi.org/10.1139/g01-122.

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The PstI family of elements are short, highly repetitive DNA sequences interspersed throughout the genome of the Bovidae. We have cloned and sequenced some members of the PstI family from cattle, goat, and buffalo. These elements are approximately 500 bp, have a copy number of 2 × 105 4 × 105, and comprise about 4% of the haploid genome. Studies of nucleotide sequence homology indicate that the buffalo and goat PstI repeats (type II) are similar types of short interspersed nucleotide element (SINE) sequences, but the cattle PstI repeat (type I) is considerably more divergent. Additionally, t

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14

Choi, WooJae, Eunji Kim, Soo-Young Yum, et al. "EfficientPRNPdeletion in bovine genome using gene-editing technologies in bovine cells." Prion 9, no. 4 (2015): 278–91. http://dx.doi.org/10.1080/19336896.2015.1071459.

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15

Gao, Shandian, Junzheng Du, Zhancheng Tian, et al. "Genome analysis of an atypical bovine pestivirus from fetal bovine serum." Virus Genes 52, no. 4 (2016): 561–63. http://dx.doi.org/10.1007/s11262-016-1321-2.

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16

Płucienniczak, G., and A. Płucienniczak. "Fragments of LINE-1 retrotransposons flanked by inverted telomeric repeats are present in the bovine genome. Homology with human LINE-1 elements." Acta Biochimica Polonica 46, no. 4 (1999): 873–78. http://dx.doi.org/10.18388/abp.1999_4108.

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In the bovine genome we found two intrachromosomal DNA fragments flanked by inverted telomeric repeats (GenBank Accession Nos. AF136741 and AF136742). The internal parts of the fragments are homologous exclusively to the human sequences and to the consensus sequence of the L1MC4 subfamily of LINE-1 retrotransposons which are widespread among mammalian genomes. We found that distribution of homologous human sequences within our fragments is not random, reflecting a complicated pattern of insertion mechanisms of and maintenance of retrotransposons in mammalian genomes. One of the possible explan

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17

Kumar, Roshan, Karen Register, Jane Christopher-Hennings, et al. "Population Genomic Analysis of Mycoplasma bovis Elucidates Geographical Variations and Genes associated with Host-Types." Microorganisms 8, no. 10 (2020): 1561. http://dx.doi.org/10.3390/microorganisms8101561.

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Among more than twenty species belonging to the class Mollecutes, Mycoplasma bovis is the most common cause of bovine mycoplasmosis in North America and Europe. Bovine mycoplasmosis causes significant economic loss in the cattle industry. The number of M. bovis positive herds recently has increased in North America and Europe. Since antibiotic treatment is ineffective and no efficient vaccine is available, M. bovis induced mycoplasmosis is primarily controlled by herd management measures such as the restriction of moving infected animals out of the herds and culling of infected or shedders of

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18

Tellam, Ross L. "Capturing benefits from the bovine genome sequence." Australian Journal of Experimental Agriculture 47, no. 9 (2007): 1039. http://dx.doi.org/10.1071/ea06032.

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The bovine genome sequence in ‘draft’ form will be complete in 2007. The availability of the sequence and very large numbers of single nucleotide polymorphisms will have profound effects on livestock production. The dairy industry is well positioned to capture the benefits of this enormous and enabling resource because of its comprehensive databases containing phenotypic and pedigree data for large numbers of animals, intense utilisation of genetics in breeding programs and efficient management of reproductive performance. The bovine genome sequence will assist in the development of novel prod

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19

Fadista, João, Bo Thomsen, Lars-Erik Holm, and Christian Bendixen. "Copy number variation in the bovine genome." BMC Genomics 11, no. 1 (2010): 284. http://dx.doi.org/10.1186/1471-2164-11-284.

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20

Snelling, Warren M., Readman Chiu, Jacqueline E. Schein, et al. "A physical map of the bovine genome." Genome Biology 8, no. 8 (2007): R165. http://dx.doi.org/10.1186/gb-2007-8-8-r165.

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21

Thornley, Mark. "Pulling the wool over the bovine genome." Australian Veterinary Journal 83, no. 7 (2005): 386. http://dx.doi.org/10.1111/j.1751-0813.2005.tb13059.x.

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22

Simpson, SP, and JL Williams. "Prospects for mapping bovine genes affecting disease and production." Proceedings of the British Society of Animal Production (1972) 1993 (March 1993): 157. http://dx.doi.org/10.1017/s0308229600024818.

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A map of the bovine genome will be an important tool for identifying genes causing congenital defects, and those controlling disease susceptibility and production traits in both beef and dairy cattle. Over 300 genes have already been mapped and a low resolution map should be available within two years. We are actively involved in the EC funded European Bovine Genome Mapping Group. To date our work has involved the development of markers and studies of experimental designs, two necessary precursors of a large scale bovine genome mapping project. In this article we briefly describe ongoing proje

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23

Jia, J., G. Delhon, E. R. Tulman, et al. "Novel gammaherpesvirus functions encoded by bovine herpesvirus 6 (bovine lymphotropic virus)." Journal of General Virology 95, no. 8 (2014): 1790–98. http://dx.doi.org/10.1099/vir.0.066951-0.

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The genus Macavirus of the subfamily Gammaherpesvirinae includes viruses that infect lymphoid cells of domestic and wild ruminants and swine, causing asymptomatic latent infections in reservoir hosts. Here, we describe the genome of bovine herpesvirus 6 (BoHV-6), a macavirus ubiquitous in healthy cattle populations. The BoHV-6 genome exhibited architecture conserved in macaviruses, including a repetitive H-DNA region and unique 141 kbp L-DNA region predicted to encode 77 genes. BoHV-6 encoded, in variable genomic regions, a novel complement of genes relative to other characterized macaviruses,

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24

Du, Huihui, Rendong Fang, Tingting Pan, et al. "Comparative Genomics Analysis of Two Different Virulent Bovine Pasteurella multocida Isolates." International Journal of Genomics 2016 (2016): 1–14. http://dx.doi.org/10.1155/2016/4512493.

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The Pasteurella multocida capsular type A isolates can cause pneumonia and bovine respiratory disease (BRD). In this study, comparative genomics analysis was carried out to identify the virulence genes in two different virulent P. multocida capsular type A isolates (high virulent PmCQ2 and low virulent PmCQ6). The draft genome sequence of PmCQ2 is 2.32 Mbp and contains 2,002 protein-coding genes, 9 insertion sequence (IS) elements, and 1 prophage region. The draft genome sequence of PmCQ6 is 2.29 Mbp and contains 1,970 protein-coding genes, 2 IS elements, and 3 prophage regions. The genome ali

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25

Adelson, David L. "Insights and applications from sequencing the bovine genome." Reproduction, Fertility and Development 20, no. 1 (2008): 54. http://dx.doi.org/10.1071/rd07157.

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Humans have sought to improve/tailor cattle since their domestication a few thousand years ago. Up until the last 40–50 years, consistent genetic improvement of cattle was a hit or miss proposition. Recent progress has been more rapid, thanks to applications of quantitative genetics to breeding schemes. With the availability of the bovine genome sequence, genetic selection and on-farm management are likely to be revolutionised yet again. Genetic association studies that were previously impossible to carry out due to a lack of markers are now possible. In addition to improved genetic mapping of

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26

Herron, Lisa L., Rajit Chakravarty, Christopher Dwan, et al. "Genome Sequence Survey Identifies Unique Sequences and Key Virulence Genes with Unusual Rates of Amino Acid Substitution in Bovine Staphylococcus aureus." Infection and Immunity 70, no. 7 (2002): 3978–81. http://dx.doi.org/10.1128/iai.70.7.3978-3981.2002.

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ABSTRACT Staphylococcus aureus is a major cause of mastitis in bovine and other ruminant species. We here present the results of a comparative genomic analysis between a bovine mastitis-associated clone, RF122, and the recently sequenced human-associated clones, Mu50 and N315, of Staphylococcus aureus. A shotgun sequence survey of ∼10% of the RF122 genome identified numerous unique sequences and those with elevated rates of nonsynonymous substitution. Taken together, these analyses show that there are notable differences in the genomes of bovine mastitis-associated and human clones of S. aureu

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27

Taylor, Rebecca S., Rebekah L. Horn, Xi Zhang, G. Brian Golding, Micheline Manseau, and Paul J. Wilson. "The Caribou (Rangifer tarandus) Genome." Genes 10, no. 7 (2019): 540. http://dx.doi.org/10.3390/genes10070540.

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Rangifer tarandus, known as caribou or reindeer, is a widespread circumpolar species which presents significant variability in their morphology, ecology, and genetics. A genome was sequenced from a male boreal caribou (R. t. caribou) from Manitoba, Canada. Both paired end and Chicago libraries were constructed and sequenced on Illumina platforms. The final assembly consists of approximately 2.205 Gb, and has a scaffold N50 of 11.765 Mb. BUSCO (Benchmarking Universal Single-Copy Orthologs) reconstructed 3820 (93.1%) complete mammalian genes, and genome annotation identified the locations of 33,

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28

Elsik, C. G., D. R. Unni, A. Tayal, C. M. Diesh, and D. E. Hagen. "P1038 BovineMine: A bovine genome data mining warehouse." Journal of Animal Science 94, suppl_4 (2016): 33. http://dx.doi.org/10.2527/jas2016.94supplement433x.

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29

Draker, Ryan, Rachel L. Roper, Martin Petric, and Raymond Tellier. "The complete sequence of the bovine torovirus genome." Virus Research 115, no. 1 (2006): 56–68. http://dx.doi.org/10.1016/j.virusres.2005.07.005.

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30

Fries, R. "Mapping the bovine genome: methodological aspects and strategy*." Animal Genetics 24, no. 2 (2009): 111–16. http://dx.doi.org/10.1111/j.1365-2052.1993.tb00250.x.

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31

Cezar, Gabriela Gebrin, Marisa S. Bartolomei, Erik J. Forsberg, Neal L. First, Michael D. Bishop, and Kenneth J. Eilertsen. "Genome-Wide Epigenetic Alterations in Cloned Bovine Fetuses1." Biology of Reproduction 68, no. 3 (2003): 1009–14. http://dx.doi.org/10.1095/biolreprod.102.010181.

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32

Barendse, W., S. M. Armitage, L. M. Kossarek, et al. "A genetic linkage map of the bovine genome." Nature Genetics 6, no. 3 (1994): 227–35. http://dx.doi.org/10.1038/ng0394-227.

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33

Kommadath, Arun, Haisheng Nie, Martien A. M. Groenen, Marinus F. W. te Pas, Roel F. Veerkamp, and Mari A. Smits. "Regional Regulation of Transcription in the Bovine Genome." PLoS ONE 6, no. 6 (2011): e20413. http://dx.doi.org/10.1371/journal.pone.0020413.

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34

Meirelles, F. V., A. R. Caetano, Y. F. Watanabe, et al. "Genome activation and developmental block in bovine embryos." Animal Reproduction Science 82-83 (July 2004): 13–20. http://dx.doi.org/10.1016/j.anireprosci.2004.05.012.

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35

Bulach, D. M., and M. J. Studdert. "Comparative genome mapping of bovine encephalitis herpesvirus, bovine herpesvirus 1, and buffalo herpesvirus." Archives of Virology 113, no. 1-2 (1990): 17–34. http://dx.doi.org/10.1007/bf01318350.

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36

Chouljenko, Vladimir N., X. Q. Lin, J. Storz, Konstantin G. Kousoulas, and Alexander E. Gorbalenya. "Comparison of genomic and predicted amino acid sequences of respiratory and enteric bovine coronaviruses isolated from the same animal with fatal shipping pneumonia." Journal of General Virology 82, no. 12 (2001): 2927–33. http://dx.doi.org/10.1099/0022-1317-82-12-2927.

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The complete genome sequences are reported here of two field isolates of bovine coronavirus (BCoV), which were isolated from respiratory and intestinal samples of the same animal experiencing fatal pneumonia during a bovine shipping fever epizootic. Both genomes contained 31028 nucleotides and included 13 open reading frames (ORFs) flanked by 5′- and 3′-untranslated regions (UTRs). ORF1a and ORF1b encode replicative polyproteins pp1a and pp1ab, respectively, that contain all of the putative functional domains documented previously for the closest relative, mouse hepatitis virus. The genomes of

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37

de Abreu Santos, Daniel Jordan, Gregório Miguel Ferreira de Camargo, Diercles Francisco Cardoso, et al. "Linkage Disequilibrium-Based Inference of Genome Homology and Chromosomal Rearrangements Between Species." G3: Genes|Genomes|Genetics 10, no. 7 (2020): 2327–43. http://dx.doi.org/10.1534/g3.120.401090.

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The aim of this study was to analyze the genomic homology between cattle (Bos taurus) and buffaloes (Bubalus bubalis) and to propose a rearrangement of the buffalo genome through linkage disequilibrium analyses of buffalo SNP markers referenced in the cattle genome assembly and also compare it to the buffalo genome assembly. A panel of bovine SNPs (single nucleotide polymorphisms) was used for hierarchical, non-hierarchical and admixture cluster analyses. Thus, the linkage disequilibrium information between markers of a specific panel of buffalo was used to infer chromosomal rearrangement. Hap

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38

Soma, Junichi, Hiroshi Tsunemitsu, Takeshi Miyamoto, Goro Suzuki, Takashi Sasaki, and Tohru Suzuki. "Whole-genome analysis of two bovine rotavirus C strains: Shintoku and Toyama." Journal of General Virology 94, no. 1 (2013): 128–35. http://dx.doi.org/10.1099/vir.0.046763-0.

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Rotavirus C (RVC) has been detected frequently in epidemic cases and/or outbreaks of diarrhoea in humans and animals worldwide. Because it is difficult to cultivate RVCs serially in cell culture, the sequence data available for RVCs are limited, despite their potential economical and epidemiological impact. Although whole-genome sequences of one porcine RVC and seven human RVC strains have been analysed, this has not yet been done for a bovine RVC strain. In the present study, we first determined the nucleotide sequences for five as-yet underresearched genes, including the NSP4 gene, from a cu

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39

Postnikova, Olga A., Igor B. Rogozin, William Samuel, et al. "Volatile Evolution of Long Non-Coding RNA Repertoire in Retinal Pigment Epithelium: Insights from Comparison of Bovine and Human RNA Expression Profiles." Genes 10, no. 3 (2019): 205. http://dx.doi.org/10.3390/genes10030205.

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Currently, several long non-coding RNAs (lncRNAs) (TUG1, MALAT1, MEG3 and others) have been discovered to regulate normal visual function and may potentially contribute to dysfunction of the retina. We decided to extend these analyses of lncRNA genes to the retinal pigment epithelium (RPE) to determine whether there is conservation of RPE-expressed lncRNA between human and bovine genomes. We reconstructed bovine RPE lncRNAs based on genome-guided assembly. Next, we predicted homologous human transcripts based on whole genome alignment. We found a small set of conserved lncRNAs that could be in

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40

Donofrio, Gaetano, and Vicky L. van Santen. "A bovine macrophage cell line supports bovine herpesvirus-4 persistent infection." Journal of General Virology 82, no. 5 (2001): 1181–85. http://dx.doi.org/10.1099/0022-1317-82-5-1181.

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Although bovine herpesvirus-4 (BHV-4), a gammaherpesvirus lacking a clear disease association, has been demonstrated in many tissues during persistent BHV-4 infection, a likely site of virus persistence is in cells of the monocyte/macrophage lineage. To establish an in vitro model of persistent infection potentially useful for examining the molecular mechanisms of BHV-4 persistence/latency, we infected the bovine macrophage cell line BOMAC. Following extensive cell death, surviving cells were found to be persistently infected, maintaining the viral genome over many passages and producing low l

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41

Meade, K. G., P. Cormican, F. Narciandi, A. Lloyd та C. O'Farrelly. "Bovine β-defensin gene family: opportunities to improve animal health?" Physiological Genomics 46, № 1 (2014): 17–28. http://dx.doi.org/10.1152/physiolgenomics.00085.2013.

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Recent analysis of the bovine genome revealed an expanded suite of β-defensin genes that encode what are referred to as antimicrobial or host defense peptides (HDPs). Whereas primate genomes also encode α- and θ-defensins, the bovine genome contains only the β-defensin subfamily of HDPs. β-Defensins perform diverse functions that are critical to protection against pathogens but also in regulation of the immune response and reproduction. As the most comprehensively studied subclass of HDPs, β-defensins possess the widest taxonomic distribution, found in invertebrates as well as plants, indicati

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42

Mawatari, Takahiro, Kaori Hirano, Hiroshi Tsunemitsu, and Tohru Suzuki. "Whole-genome analysis of bovine rotavirus species C isolates obtained in Yamagata, Japan, 2003–2010." Journal of General Virology 95, no. 5 (2014): 1117–25. http://dx.doi.org/10.1099/vir.0.062166-0.

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An epidemic of diarrhoea in adult cows occurred at a total of 105 dairy farms in Yamagata Prefecture, Japan, between 2003 and 2010. Reverse transcription-PCR diagnostic tests revealed the presence of bovine rotavirus species C (RVCs) in samples from each of six farms (5.7 %). In this study, we determined the full-length nucleotide sequences of 11 RNA segments from six bovine RVC strains and investigated genetic diversity among them, including two bovine RVC strains identified in a previous study. Comparisons of all segmental nucleotide and the deduced amino acid sequences among bovine RVCs ind

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43

Vozdova, Miluse, Svatava Kubickova, Halina Cernohorska, Jan Fröhlich, and Jiri Rubes. "Anchoring the CerEla1.0 Genome Assembly to Red Deer (Cervus elaphus) and Cattle (Bos taurus) Chromosomes and Specification of Evolutionary Chromosome Rearrangements in Cervidae." Animals 11, no. 9 (2021): 2614. http://dx.doi.org/10.3390/ani11092614.

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The family Cervidae groups a range of species with an increasing economic significance. Their karyotypes share 35 evolutionary conserved chromosomal segments with cattle (Bos taurus). Recent publication of the annotated red deer (Cervus elaphus) whole genome assembly (CerEla1.0) has provided a basis for advanced genetic studies. In this study, we compared the red deer CerEla1.0 and bovine ARS-UCD1.2 genome assembly and used fluorescence in situ hybridization with bovine BAC probes to verify the homology between bovine and deer chromosomes, determined the centromere-telomere orientation of the

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44

TAKASUGA, Akiko. "Development of bovine genomic tools and the progress of the bovine genome sequencing project." Journal of animal genetics 34, no. 1 (2006): 31–39. http://dx.doi.org/10.5924/abgri2000.34.31.

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45

Liu, Hua, Yan Li, Mingchun Gao, et al. "Complete Genome Sequence of a Bovine Viral Diarrhea Virus 2 from Commercial Fetal Bovine Serum." Journal of Virology 86, no. 18 (2012): 10233. http://dx.doi.org/10.1128/jvi.01581-12.

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We isolated a bovine viral diarrhea virus (BVDV) from commercial fetal bovine serum and designated it HLJ-10. The complete genome is 12,284 nucleotides (nt); the open reading frame is 11,694 nt, coding 3,898 amino acids. Phylogenetic analysis indicated that this strain belongs to BVDV group 2.

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46

Ben Zakour, Nouri L., Daniel E. Sturdevant, Sergine Even, et al. "Genome-Wide Analysis of Ruminant Staphylococcus aureus Reveals Diversification of the Core Genome." Journal of Bacteriology 190, no. 19 (2008): 6302–17. http://dx.doi.org/10.1128/jb.01984-07.

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ABSTRACT Staphylococcus aureus causes disease in humans and a wide array of animals. Of note, S. aureus mastitis of ruminants, including cows, sheep, and goats, results in major economic losses worldwide. Extensive variation in genome content exists among S. aureus pathogenic clones. However, the genomic variation among S. aureus strains infecting different animal species has not been well examined. To investigate variation in the genome content of human and ruminant S. aureus, we carried out whole-genome PCR scanning (WGPS), comparative genomic hybridizations (CGH), and the directed DNA seque

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Abed Alhussen, Mohammad, A. A. Nesterov, V. V. Kirpichenko, et al. "Bovine mycoplasmosis occurrence on livestock farms in the Russian Federation for 2015–2018." Veterinary Science Today, no. 2 (June 16, 2020): 102–8. http://dx.doi.org/10.29326/2304-196x-2020-2-33-102-108.

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Mycoplasmosis control remains urgent in view of wide spread of bovine mycoplasmoses in the countries with intensive animal farming and trade relations between the Russian Federation and foreign partners including import of pedigree livestock and stud bull semen. Results of testing 1,186 biomaterial samples (blood, sera, nasal swabs, milk, preputial swabs, vaginal swabs, aborted and stillborn fetuses) collected from animals that demonstrated clinical signs of respiratory and reproductive disorders in 34 different regions of the Russian Federation for 2015–2018 are presented in the paper. The sa

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Engels, M., E. Loepfe, P. Wild, E. Schraner, and R. Wyler. "The Genome of Caprine Herpesvirus 1: Genome Structure and Relatedness to Bovine Herpesvirus 1." Journal of General Virology 68, no. 7 (1987): 2019–23. http://dx.doi.org/10.1099/0022-1317-68-7-2019.

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Tse, Herman, Wan-Mui Chan, Hoi-Wah Tsoi, et al. "Rediscovery and genomic characterization of bovine astroviruses." Journal of General Virology 92, no. 8 (2011): 1888–98. http://dx.doi.org/10.1099/vir.0.030817-0.

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The genus Mamastrovirus belongs to the family Astroviridae and consists of at least six members infecting different mammalian hosts, including humans, cattle and pigs. In recent years, novel astroviruses have been identified in other mammalian species like roe deer, bats and sea lions. While the bovine astrovirus was one of the earliest astroviruses to have been studied, no further research has been performed recently and its genome sequence remains uncharacterized. In this report, we describe the detection and genomic characterization of astroviruses in bovine faecal specimens obtained in Hon

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Kurcubic, V., R. Djokovic, D. Vidanovic, et al. "Bovine respiratory disease complex (BRDC): Viral and bacterial pathogens in Serbia." Biotehnologija u stocarstvu 29, no. 1 (2013): 37–43. http://dx.doi.org/10.2298/bah1301037k.

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Pathogens causing BRDC in Serbia were investigated. Two herds of beef cattle with bovine respiratory disease were included, with twenty diseased calves (10 from each farm) were chosen for isolation of bacteria on artificial culture media and determination by aerobic cultivation. The most common bacterial pathogen was isolated was Pasteurella multocida. Diffusion method of sensitivity to antibiotics (antibiogram), revealed that Enrofloxacin and Floron were most efficient antibiotics against Pasteurella multocida isolates (100 % isolates sensitive on both antibiotics). From the all examined samp

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