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Journal articles on the topic 'Ccoaomt'

Author: Grafiati

Published: 4 June 2021

Last updated: 1 February 2022

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1

Li, Leli, Shutian Tao, Huangwei Zhang, Weijian Huang, Jim M. Dunwell, and Meng Li. "Identification and Characterization of the CCoAOMT Gene Family in Apple, Chinese White Pear, and Peach." Journal of the American Society for Horticultural Science 146, no. 3 (2021): 184–95. http://dx.doi.org/10.21273/jashs04950-20.

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Lignin is one of the main components of plant cell walls, which provides mechanical support for plants and also contributes to resisting against plant pathogenic fungi. In the fruit industry, the lignin content can affect the quality of fruit. The biosynthesis of lignin involves a variety of enzymes, of which caffeoyl-CoA 3-O-methyltransferase (CCoAOMT) is a class of methyltransferases that plays an essential role in lignin biosynthesis. Studies have been conducted on the CCoAOMT gene family in several species, including arabidopsis (Arabidopsis thaliana), black poplar (Populus nigra), and cot

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2

ZHAO, Huayan. "Characterization of three rice CCoAOMT genes." Chinese Science Bulletin 49, no. 15 (2004): 1602. http://dx.doi.org/10.1360/04wc0225.

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3

Yang, Qian, Hoat Xuan Trinh, Satoshi Imai, et al. "Analysis of the Involvement of Hydroxyanthranilate Hydroxycinnamoyltransferase and Caffeoyl-CoA 3-O-Methyltransferase in Phytoalexin Biosynthesis in Oat." Molecular Plant-Microbe Interactions® 17, no. 1 (2004): 81–89. http://dx.doi.org/10.1094/mpmi.2004.17.1.81.

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Two oat genes encoding hydroxycinnamoyl-CoA:hydroxyanthranilate N-hydroxycinnamoyltransferase (HHT) and S-adenosyl-l-methionine:trans-caffeoyl-CoA 3-O-methyltransferase (CCoAOMT), both of which are possibly involved in the biosynthesis of oat avenanthramide phytoalexins, were cloned and their expression profiles in response to biological stress were studied. Four distinct cDNAs of oat HHT (AsHHT1-4) were isolated with the degenerative polymerase chain reaction method. The enzymatic activity of AsHHT1 expressed in E. coli was found using hydroxyanthranilate and hydroxycinnamoyl-CoAs as cosubstr

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4

Rakoczy, M., I. Femiak, M. Alejska, M. Figlerowicz, and J. Podkowinski. "Sorghum CCoAOMT and CCoAOMT-like gene evolution, structure, expression and the role of conserved amino acids in protein activity." Molecular Genetics and Genomics 293, no. 5 (2018): 1077–89. http://dx.doi.org/10.1007/s00438-018-1441-6.

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5

Wagner, Armin, Yuki Tobimatsu, Lorelle Phillips, et al. "CCoAOMT suppression modifies lignin composition in Pinus radiata." Plant Journal 67, no. 1 (2011): 119–29. http://dx.doi.org/10.1111/j.1365-313x.2011.04580.x.

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6

Shaipulah, Nur Fariza M., Joëlle K. Muhlemann, Benjamin D. Woodworth, et al. "CCoAOMT Down-Regulation Activates Anthocyanin Biosynthesis in Petunia." Plant Physiology 170, no. 2 (2015): 717–31. http://dx.doi.org/10.1104/pp.15.01646.

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7

Eom, In-Yong, Kwang-Ho Kim, Soo-Min Lee, Yong-Sub Yi, and Joon-Weon Choi. "Characterization of Chemical Composition in Poplar wood (Populus deltoides) by Suppression of CCoAOMT Gene Expression." Journal of the Korean Wood Science and Technology 38, no. 3 (2010): 213–22. http://dx.doi.org/10.5658/wood.2010.38.3.213.

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8

Lu, Jing, Huayan Zhao, Jianhua Wei, et al. "Lignin reduction in transgenic poplars by expressing antisense CCoAOMT gene." Progress in Natural Science 14, no. 12 (2004): 1060–63. http://dx.doi.org/10.1080/10020070412331344801.

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9

Li, Zhiyong, Yi Chen, Dauenpen Meesapyodsuk, and Xiao Qiu. "The Biosynthetic Pathway of Major Avenanthramides in Oat." Metabolites 9, no. 8 (2019): 163. http://dx.doi.org/10.3390/metabo9080163.

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Avenanthramides are a group of N-cinnamoylanthranilic acids, with health-promoting properties mainly found in oat (Avena sativa L.). However, the biosynthetic mechanism for the main three types of avenanthramides (Avn-A, Avn-B and Avn-C) is not completely understood. In the present study, we report molecular identification and functional characterization of three different types of genes from oat encoding 4-coumarate-CoA ligase (4CL), hydroxycinnamoyl-CoA:hydroxyanthranilate N-hydroxycinnamoyl transferase (HHT) and a caffeoyl-CoA O-methyltransferase (CCoAOMT) enzymes, all involved in the biosy

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10

Edmunds, Charles W., Perry Peralta, Ratna R. Sharma-Shivappa, et al. "Fungal pretreatment and enzymatic hydrolysis of genetically-modified Populus trichocarpa." BioResources 15, no. 3 (2020): 6488–505. http://dx.doi.org/10.15376/biores.15.3.6488-6505.

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Fungal pretreatment of Populus trichocarpa wood genetically modified to reduce lignin and alter lignin chemistry is investigated for its effectiveness as an alternative to common pretreatment methods. The goal of this work is to improve biomass utilization for biofuel and biochemical applications by increasing sugar release. Sugar release after enzymatic hydrolysis was measured after various biomass pretreatments (including wood-rot fungus, hot water, and dilute acid). In the wildtype, and in constructs downregulated in PAL, 4CL, and C3H, the fungal pretreatment resulted in substantial improve

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11

Edmunds, Charles W., Perry Peralta, Ratna R. Sharma-Shivappa, et al. "Fungal Pretreatment and Enzymatic Hydrolysis of Genetically-modified Populus trichocarpa." BioResources 15, no. 3 (2020): 6488–505. http://dx.doi.org/10.15376/biores.15.3.6488-6506.

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Fungal pretreatment of Populus trichocarpa wood genetically modified to reduce lignin and alter lignin chemistry is investigated for its effectiveness as an alternative to common pretreatment methods. The goal of this work is to improve biomass utilization for biofuel and biochemical applications by increasing sugar release. Sugar release after enzymatic hydrolysis was measured after various biomass pretreatments (including wood-rot fungus, hot water, and dilute acid). In the wildtype, and in constructs downregulated in PAL, 4CL, and C3H, the fungal pretreatment resulted in substantial improve

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12

Guo, Zhenhao, Hui Hua, Jin Xu, Jiaxing Mo, Hui Zhao, and Junjie Yang. "Cloning and Functional Analysis of Lignin Biosynthesis Genes Cf4CL and CfCCoAOMT in Cryptomeria fortunei." Genes 10, no. 8 (2019): 619. http://dx.doi.org/10.3390/genes10080619.

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Cryptomeria fortunei, also known as the Chinese cedar, is an important timber species in southern China. The primary component of its woody tissues is lignin, mainly present in secondary cell walls. Therefore, continuous lignin synthesis is crucial for wood formation. In this study, we aimed to discover key genes involved in lignin synthesis expressed in the vascular cambium of C. fortunei. Through transcriptome sequencing, we detected expression of two genes, 4CL and CCoAOMT, known to be homologous to enzymes involved in the lignin synthesis pathway. We studied the function of these genes thr

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13

Liu, Yuexue, Dongmei Zou, Bisha Wu, Dahe Lin, Zhihong Zhang, and Jincheng Wu. "Cloning and expression analysis of a CCoAOMT homolog in loquat fruit in response to low-temperature storage." Postharvest Biology and Technology 105 (July 2015): 45–50. http://dx.doi.org/10.1016/j.postharvbio.2015.03.008.

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14

宋, 艳茹, 华燕赵, 惠荣刘, 台. 王, 景昱张 та 建华魏. "抑制COMT与CCoAOMT调控植物木质素的生物合成". Chinese Science Bulletin 47, № 8 (2002): 604–7. http://dx.doi.org/10.1360/csb2002-47-8-604.

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15

Su, Nana, Fei Ling, Aiming Xing, et al. "Lignin synthesis mediated by CCoAOMT enzymes is required for the tolerance against excess Cu in Oryza sativa." Environmental and Experimental Botany 175 (July 2020): 104059. http://dx.doi.org/10.1016/j.envexpbot.2020.104059.

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16

Bianchi, Michele Wolfe, Catherine Damerval, and Nicole Vartanian. "Identification of proteins regulated by cross-talk between drought and hormone pathways in Arabidopsis wild-type and auxin-insensitive mutants, axr1 and axr2." Functional Plant Biology 29, no. 1 (2002): 55. http://dx.doi.org/10.1071/pp01113.

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Ten proteins differentially regulated by progressive drought stress in Arabidopsis Columbia wild-type, axr1-3 and axr2-1auxin-insensitive mutants, were identified from internal amino acid microsequencing. These proteins fell into two categories: (i) stress-related proteins, known to be induced by rapid water stress via abscisic acid (ABA)-dependent or -independent pathways [late embryogenesis abundant (LEA)-like and heat shock cognate (HS) 70, respectively], or in response to pathogens or oxidative stress [β-1,3 glucanase (BG), annexin] and (ii) metabolic enzymes [glutamine synthetase (GS), fr

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17

Li, Xiaoyu, Wenjuan Chen, Yang Zhao, et al. "Downregulation of caffeoyl-CoA O-methyltransferase (CCoAOMT) by RNA interference leads to reduced lignin production in maize straw." Genetics and Molecular Biology 36, no. 4 (2013): 540–46. http://dx.doi.org/10.1590/s1415-47572013005000039.

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18

Tang, J. M., Q. H. Liao, T. Hu, L. W. Qi, and Z. X. Li. "Expression of CCoAOMT from Zingiber officinale Roscoe under NaCl Stress and Its Regulatory Role in 6-Gingerol Biosynthesis." Russian Journal of Plant Physiology 68, no. 2 (2021): 286–92. http://dx.doi.org/10.1134/s1021443721020199.

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19

Cseke, Klára, Zoltán Attila Köbölkuti, Attila Benke, et al. "Nemesnyár klónok faanyagtani jellemzőkhöz köthető génjeinek genetikai változatossága." Erdészettudományi Közlemények 10, no. 1 (2020): 5–16. http://dx.doi.org/10.17164/ek.2020.001.

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A nemesnyárak kiemelkedő gazdasági jelentőséggel bírnak. A bemutatott vizsgálat legfőbb célja egy olyan kutatási metodika ismertetése, amely a faanyag tulajdonságaiért felelős kulcsenzimek kódoló régióinak azonosításából indul ki, bemutatva a genomikai alapokra helyezett nemesítési technológiákban rejlő lehetőségeket. A vizsgálatunk első szakaszában 24 különböző, a faanyagképződés szempontjából releváns enzim kódoló régiójára terveztünk primerpárokat. Összesen 55 saját fejlesztésű primerpárt teszteltünk, 47,27%-os sikerességgel. Ezután nyolc enzimet választottunk ki részletesebb elemzésre hét

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20

Wu, Xiaobo, Ziwei Yan, Xujie Dong, Fuxiang Cao, Jiqing Peng, and Meng Li. "Cloning and characterization of a CCoAOMT gene involved in rapid lignification of endocarp in dove tree (Davidia involucrata Baill.)." Biotechnology & Biotechnological Equipment 32, no. 6 (2018): 1398–406. http://dx.doi.org/10.1080/13102818.2018.1525324.

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21

Pang, S. L., S. S. Ong, H. H. Lee, et al. "Isolation and characterization of CCoAOMT in interspecific hybrid of Acacia auriculiformis x Acacia mangium - a key gene in lignin biosynthesis." Genetics and Molecular Research 13, no. 3 (2014): 7217–38. http://dx.doi.org/10.4238/2014.september.5.7.

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22

A.Kovalitskaya, Yu, N. P.Kovalenko, and K. A.Shestibratov. "Populus Tremula Plants with Reduced Expression of the 4-Coumarate-CoA Ligase Gene Demonstrate Defects of the Rhizogenesis." International Journal of Engineering & Technology 7, no. 4.36 (2018): 1139. http://dx.doi.org/10.14419/ijet.v7i4.36.25374.

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Changing expression of a single gene by introducing mutations or transformation often affects expression of other genes, which results in the modification of the plant phenotype. We have obtained aspen plants with reduced expression levels of 4CL gene (4-coumarate-CoA ligase). Change in qualitative composition and 11-23% reduced lignin content were observed in the wood of the greenhouse plants. In the study of rhizogenesis in vitro it was found that the micro shoots of transgenic plants formed a greater number of adventive roots than in the control, 30%. Studying the transgenic aspen plants gr

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23

王, 彦珍, 乐庆曲, 瑞芬李 та ін. "抑制<italic>CCoAOMT</italic>表达的转基因杨树的制浆性能". Chinese Science Bulletin 53, № 21 (2008): 2612–16. http://dx.doi.org/10.1360/csb2008-53-21-2612.

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24

Tang, Yinghong, Fang Liu, Hucheng Xing, et al. "Correlation Analysis of Lignin Accumulation and Expression of Key Genes Involved in Lignin Biosynthesis of Ramie (Boehmeria nivea)." Genes 10, no. 5 (2019): 389. http://dx.doi.org/10.3390/genes10050389.

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The phloem of the stem of ramie (Boehmeria nivea) is an important source of natural fiber for the textile industry. However, the lignin content in the phloem affects the quality of ramie phloem fiber. In this study, the lignin content and related key gene expression levels were analyzed in the phloem and xylem at different developmental periods. The results showed that the relative expression levels of lignin synthesis-related key genes in the xylem and phloem of the stem gradually decreased from the fast-growing period to the late maturation period, but the corresponding lignin content increa

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25

Wang, Guan-Feng, and Peter J. Balint-Kurti. "Maize Homologs of CCoAOMT and HCT, Two Key Enzymes in Lignin Biosynthesis, Form Complexes with the NLR Rp1 Protein to Modulate the Defense Response." Plant Physiology 171, no. 3 (2016): 2166–77. http://dx.doi.org/10.1104/pp.16.00224.

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26

Sekhar Pagadala, Nataraj, Manish Arha, P. S. Reddy, et al. "Phylogenetic analysis, homology modelling, molecular dynamics and docking studies of caffeoyl–CoA-O- methyl transferase (CCoAOMT 1 and 2) isoforms isolated from subabul (Leucaena leucocephala)." Journal of Molecular Modeling 15, no. 2 (2008): 203–21. http://dx.doi.org/10.1007/s00894-008-0395-8.

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27

Cao, Yunpeng, Xiaoxu Li, and Lan Jiang. "Integrative Analysis of the Core Fruit Lignification Toolbox in Pear Reveals Targets for Fruit Quality Bioengineering." Biomolecules 9, no. 9 (2019): 504. http://dx.doi.org/10.3390/biom9090504.

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Stone cell content is an important factor affecting pear fruit flavor. Lignin, a major component of pear stone cells, hinders the quality and value of commercial fruit. The completion of the Chinese white pear (Pyrus bretschneideri) genome sequence provides an opportunity to perform integrative analysis of the genes encoding the eleven protein families (i.e., PAL, C4H, 4CL, HCT, C3H, CSE, CCoAOMT, CCR, F5H, COMT, and CAD) in the phenylpropanoid pathway. Here, a systematic study based on expression patterns and phylogenetic analyses was performed to identify the members of each gene family pote

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28

Chun, Hyun Jin, Lack Hyeon Lim, Mi Sun Cheong, et al. "Arabidopsis CCoAOMT1 Plays a Role in Drought Stress Response via ROS- and ABA-Dependent Manners." Plants 10, no. 5 (2021): 831. http://dx.doi.org/10.3390/plants10050831.

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Plants possess adaptive reprogramed modules to prolonged environmental stresses, including adjustment of metabolism and gene expression for physiological and morphological adaptation. CCoAOMT1 encodes a caffeoyl CoA O-methyltransferase and is known to play an important role in adaptation of Arabidopsis plants to prolonged saline stress. In this study, we showed that the CCoAOMT1 gene plays a role in drought stress response. Transcript of CCoAOMT1 was induced by salt, dehydration (drought), and methyl viologen (MV), and loss of function mutants of CCoAOMT1, ccoaomt1-1, and ccoaomt1-2 exhibit hy

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29

Liu, Jinjie, Chong Xu, Honglei Zhang, Fawang Liu, Dongming Ma, and Zhong Liu. "Comparative Transcriptomics Analysis for Gene Mining and Identification of a Cinnamyl Alcohol Dehydrogenase Involved in Methyleugenol Biosynthesis from Asarum sieboldii Miq." Molecules 23, no. 12 (2018): 3184. http://dx.doi.org/10.3390/molecules23123184.

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Asarum sieboldii Miq., one of the three original plants of TCM ASARI RADIX ET RHIZOMA, is a perennial herb distributed in central and eastern China, the Korean Peninsula, and Japan. Methyleugenol has been considered as the most important constituent of Asarum volatile oil, meanwhile asarinin is also employed as the quality control standard of ASARI RADIX ET RHIZOMA in Chinese Pharmacopeia. They both have shown wide range of biological activities. However, little was known about genes involved in biosynthesis pathways of either methyleugenol or asarinin in Asarum plants. In the present study, w

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30

Ramos, Rose Lucia Braz, Francisco Javier Tovar, Ricardo Magrani Junqueira, Fabiane Borges Lino, and Gilberto Sachetto-Martins. "Sugarcane expressed sequences tags (ESTs) encoding enzymes involved in lignin biosynthesis pathways." Genetics and Molecular Biology 24, no. 1-4 (2001): 235–41. http://dx.doi.org/10.1590/s1415-47572001000100031.

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Lignins are phenolic polymers found in the secondary wall of plant conductive systems where they play an important role by reducing the permeability of the cell wall to water. Lignins are also responsible for the rigidity of the cell wall and are involved in mechanisms of resistance to pathogens. The metabolic routes and enzymes involved in synthesis of lignins have been largely characterized and representative genes that encode enzymes involved in these processes have been cloned from several plant species. The synthesis of lignins is liked to the general metabolism of the phenylpropanoids in

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31

Liu, Yi, Wenjin Su, Lianjun Wang, et al. "Integrated transcriptome, small RNA and degradome sequencing approaches proffer insights into chlorogenic acid biosynthesis in leafy sweet potato." PLOS ONE 16, no. 1 (2021): e0245266. http://dx.doi.org/10.1371/journal.pone.0245266.

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Leafy sweet potato is rich in total phenolics (TP) which play key roles in health protection, the chlorogenic acid (CGA) constitutes the major components of phenolic compounds in leafy sweet potato. Unfortunately, the mechanism of CGA biosynthesis in leafy sweet potato is unclear. To dissect the mechanisms of CGA biosynthesis, we performed transcriptome, small RNA (sRNA) and degradome sequencing of one low-CGA content and one high-CGA content genotype at two stages. A total of 2,333 common differentially expressed genes (DEGs) were identified, and the enriched DEGs were related to photosynthes

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32

吕, 世友, 台. 王, 艳茹宋, 庆喜沈 та 华燕赵. "水稻咖啡酰辅酶A-O-甲基转移酶基因(<I>CCoAOMT</I>)表达特性分析". Chinese Science Bulletin 49, № 14 (2004): 1390–94. http://dx.doi.org/10.1360/csb2004-49-14-1390.

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33

Su, Liangchen, Shuai Liu, Xing Liu, et al. "Transcriptome profiling reveals histone deacetylase 1 gene overexpression improves flavonoid, isoflavonoid, and phenylpropanoid metabolism in Arachis hypogaea hairy roots." PeerJ 9 (March 16, 2021): e10976. http://dx.doi.org/10.7717/peerj.10976.

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Background The peanut (Arachis hypogaea) is a crop plant of high economic importance, but the epigenetic regulation of its root growth and development has not received sufficient attention. Research on Arabidopsis thaliana has shown that histone deacetylases (HDACs) are involved in cell growth, cell differentiation, and stress response. Few studies have focused on the role of HDACs in the root development of other plants, particularly crop plants. In earlier studies, we found large accumulations of A. hypogaea histone deacetylase 1 (AhHDA1) mRNA in peanut roots. However, we did not explore the

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34

Fellenberg, Christin, Maike van Ohlen, Vinzenz Handrick, and Thomas Vogt. "The role of CCoAOMT1 and COMT1 in Arabidopsis anthers." Planta 236, no. 1 (2012): 51–61. http://dx.doi.org/10.1007/s00425-011-1586-6.

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35

Koshiro, Yukiko, Mel C. Jackson, Riko Katahira, Ming-Li Wang, Chifumi Nagai, and Hiroshi Ashihara. "Biosynthesis of Chlorogenic Acids in Growing and Ripening Fruits of Coffea arabica and Coffea canephora Plants." Zeitschrift für Naturforschung C 62, no. 9-10 (2007): 731–42. http://dx.doi.org/10.1515/znc-2007-9-1017.

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Chlorogenic acids are major secondary metabolites found in coffee seeds. The accumulation of chlorogenic acids and free quinic acids was studied in Coffea arabica cv. Tall Mokka and Coffea canephora seeds. Growth stages are specified from I to V, corresponding to rapid expansion and pericarp growth (I), endosperm formation (II), mature (green) (III), ripening (pink) (IV), and fully ripened (red) (V) stages. We detected monocaffeoylquinic acids (3CQA, 4CQA and 5CQA), dicaffeoylquinic acids (3,4diCQA, 3,5diCQA and 4,5diCQA) and a monoferuloylquinic acid (5FQA) in whole fruits (stage I), pericarp

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36

Kwon, Hyeokjin, Da Jeong Cho, Horim Lee, Myung Hee Nam, Chian Kwon, and Hye Sup Yun. "CCOAOMT1, a candidate cargo secreted via VAMP721/722 secretory vesicles in Arabidopsis." Biochemical and Biophysical Research Communications 524, no. 4 (2020): 977–82. http://dx.doi.org/10.1016/j.bbrc.2020.02.029.

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37

Yang, Shu-Xian, Tian-Tian Wu, Ci-Hang Ding, Peng-Cheng Zhou, Zhong-Zhong Chen, and Jin-Ying Gou. "SAHH and SAMS form a methyl donor complex with CCoAOMT7 for methylation of phenolic compounds." Biochemical and Biophysical Research Communications 520, no. 1 (2019): 122–27. http://dx.doi.org/10.1016/j.bbrc.2019.09.101.

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38

Zhang, Gaoyang, Yujia Zhang, Jiantang Xu, et al. "The CCoAOMT1 gene from jute (Corchorus capsularis L.) is involved in lignin biosynthesis in Arabidopsis thaliana." Gene 546, no. 2 (2014): 398–402. http://dx.doi.org/10.1016/j.gene.2014.05.011.

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39

Chun, Hyun Jin, Dongwon Baek, Byung Jun Jin, et al. "Microtubule Dynamics Plays a Vital Role in Plant Adaptation and Tolerance to Salt Stress." International Journal of Molecular Sciences 22, no. 11 (2021): 5957. http://dx.doi.org/10.3390/ijms22115957.

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Although recent studies suggest that the plant cytoskeleton is associated with plant stress responses, such as salt, cold, and drought, the molecular mechanism underlying microtubule function in plant salt stress response remains unclear. We performed a comparative proteomic analysis between control suspension-cultured cells (A0) and salt-adapted cells (A120) established from Arabidopsis root callus to investigate plant adaptation mechanisms to long-term salt stress. We identified 50 differentially expressed proteins (45 up- and 5 down-regulated proteins) in A120 cells compared with A0 cells.

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40

Vega-Centeno, Rafael. "Cerro Lampay: Architectural Design and Human Interaction in the North Central Coast of Peru." Latin American Antiquity 21, no. 2 (2010): 115–45. http://dx.doi.org/10.7183/1045-6635.21.2.115.

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AbstractRecent fieldwork concerning the late Preceramic/late Archaic period on the PeruvianNorth-Central Ccoast has revealed the existence of large architectural complexes, which scholars interpret as indicative of social complexity. This article is especially concerned with architectural design as an effective means to define social and political organization at Cerro Lampay. It concludes that there was not a highly formalized hierarchy but that power positions within the community could have been negotiated through ritual practices that included the dual organization of participants. It is h

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41

Zhang, Zhang, Li, Wang, Qu, and Fan. "Transcriptome Analysis of Elm (Ulmus pumila) Fruit to Identify Phytonutrients Associated Genes and Pathways." Forests 10, no. 9 (2019): 738. http://dx.doi.org/10.3390/f10090738.

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Plant fruit is an important source of natural active phytonutrients that are profitable for human health. Elm (Ulmus pumila) fruit is considered as natural plant food in China that is rich in nutrients. In the present study, high-throughput RNA sequencing was performed in U. pumila edible fruits and leaves and 11,386 unigenes were filtered as dysregulated genes in fruit samples, including 5231 up- and 6155 downregulated genes. Hundreds of pathways were predicted to participate in seed development and phytonutrient biosynthesis in U. pumila by GO, MapMan, and KEGG enrichment analysis, including

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42

Lepelley, Maud, Gerald Cheminade, Nicolas Tremillon, Andrew Simkin, Victoria Caillet, and James McCarthy. "Chlorogenic acid synthesis in coffee: An analysis of CGA content and real-time RT-PCR expression of HCT, HQT, C3H1, and CCoAOMT1 genes during grain development in C. canephora." Plant Science 172, no. 5 (2007): 978–96. http://dx.doi.org/10.1016/j.plantsci.2007.02.004.

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43

Zheng, Xiaorong, Birger Koopmann, and Andreas von Tiedemann. "Role of Salicylic Acid and Components of the Phenylpropanoid Pathway in Basal and Cultivar-Related Resistance of Oilseed Rape (Brassica napus) to Verticillium longisporum." Plants 8, no. 11 (2019): 491. http://dx.doi.org/10.3390/plants8110491.

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Enhanced resistance is a key strategy of controlling ‘Verticillium stem striping’ in Brassica napus caused by the soil-borne vascular pathogen Verticillium longisporum. The present study analyses the role of a broad range of components in the phenylpropanoid and salicylic acid (SA) pathways in basal and cultivar-related resistance of B. napus towards V. longisporum. A remarkable increase of susceptibility to V. longisporum in SA-deficient transgenic NahG plants indicated an essential role of SA in basal resistance of B. napus to V. longisporum. Accordingly, elevated SA levels were also found i

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Oestmann, Daniel J., Donald H. Lewis, and Brian A. Zettler. "Communications: Clearance ofAmyloodinium ocellatumDinospores byArtemia salina." Journal of Aquatic Animal Health 7, no. 3 (1995): 257–61. http://dx.doi.org/10.1577/1548-8667(1995)007<0257:ccoaod>2.3.co;2.

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Hare, J. Daniel, and David J. W. Morgan. "CHEMICAL CONSPICUOUSNESS OF AN HERBIVORE TO ITS NATURAL ENEMY: EFFECT OF FEEDING SITE SELECTION." Ecology 81, no. 2 (2000): 509–19. http://dx.doi.org/10.1890/0012-9658(2000)081[0509:ccoaht]2.0.co;2.

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Yang, Guang, Wenqiu Pan, Ruoyu Zhang, et al. "Genome-wide identification and characterization of caffeoyl-coenzyme A O-methyltransferase genes related to the Fusarium head blight response in wheat." BMC Genomics 22, no. 1 (2021). http://dx.doi.org/10.1186/s12864-021-07849-y.

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Abstract Background Lignin is one of the main components of the cell wall and is directly associated with plant development and defence mechanisms in plants, especially in response to Fusarium graminearum (Fg) infection. Caffeoyl-coenzyme A O-methyltransferase (CCoAOMT) is the main regulator determining the efficiency of lignin synthesis and composition. Although it has been characterized in many plants, to date, the importance of the CCoAOMT family in wheat is not well understood. Results Here, a total of 21 wheat CCoAOMT genes (TaCCoAOMT) were identified through an in silico genome search me

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Zhao, Hancheng, Chunpu Qu, Zhuang Zuo, et al. "Genome Identification and Expression Profiles in Response to Nitrogen Treatment Analysis of the Class I CCoAOMT Gene Family in Populus." Biochemical Genetics, August 19, 2021. http://dx.doi.org/10.1007/s10528-021-10112-4.

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Li, YanYan, Lin Wang, GuangWei Sun, et al. "Digital gene expression analysis of the response to Ralstonia solanacearum between resistant and susceptible tobacco varieties." Scientific Reports 11, no. 1 (2021). http://dx.doi.org/10.1038/s41598-021-82576-8.

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AbstractTobacco bacterial wilt (TBW) caused by Ralstonia solanacearum is the most serious soil-borne disease of tobacco. However, molecular mechanism information of R. solanacearum resistance is limited to tobacco, hindering better breeding of resistant tobacco. In this study, the expression profiles of the rootstalks of Yunyan87 (susceptible cultivar) and Fandi3 (resistant cultivar) at different stages after R. solanacearum infection were compared to explore molecular mechanisms of tobacco resistance against the bacterium. Findings from gene-expression profiling indicated that the number of u

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Su, Xueqiang, Yu Zhao, Han Wang, et al. "Transcriptomic analysis of early fruit development in Chinese white pear (Pyrus bretschneideri Rehd.) and functional identification of PbCCR1 in lignin biosynthesis." BMC Plant Biology 19, no. 1 (2019). http://dx.doi.org/10.1186/s12870-019-2046-x.

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Abstract Background The content of stone cells and lignin is one of the key factors affecting the quality of pear fruit. In a previous study, we determined the developmental regularity of stone cells and lignin in ‘Dangshan Su’ pear fruit 15-145 days after pollination (DAP). However, the development of fruit stone cells and lignin before 15 DAP has not been heavily researched. Results In this study, we found that primordial stone cells began to appear at 7 DAP and that the fruit had formed a large number of stone cells at 15 DAP. Subsequently, transcriptome sequencing was performed on fruits a

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Yaya Lancheros, Mary Luz, Krishan Mohan Rai, Vimal Kumar Balasubramanian, Lavanya Dampanaboina, Venugopal Mendu, and Wilson Terán. "De novo transcriptome analysis of white teak (Gmelina arborea Roxb) wood reveals critical genes involved in xylem development and secondary metabolism." BMC Genomics 22, no. 1 (2021). http://dx.doi.org/10.1186/s12864-021-07777-x.

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Abstract Background Gmelina arborea Roxb is a fast-growing tree species of commercial importance for tropical countries due to multiple industrial uses of its wood. Wood is primarily composed of thick secondary cell walls of xylem cells which imparts the strength to the wood. Identification of the genes involved in the secondary cell wall biosynthesis as well as their cognate regulators is crucial to understand how the production of wood occurs and serves as a starting point for developing breeding strategies to produce varieties with improved wood quality, better paper pulping or new potentia

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