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Journal articles on the topic 'Choanoflagellida'

Author: Grafiati

Published: 29 July 2024

Last updated: 31 July 2025

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1

Zolotarev, V. A., Ya V. Stroinov, and N. G. Kosolapova. "Microperiphyton development in lakes and reservoirs." Limnology and Freshwater Biology, no. 4 (2024): 1188–95. http://dx.doi.org/10.31951/2658-3518-2024-a-4-1188.

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Biofilms play an important role in the material flux of lakes and other aquatic ecosystems, but little is known about the mechanisms controlling their community structure under natural conditions. In the present study, we focused on the use of artificial substrates for the life strategies of microbial communities investigation. Heterotrophic nanoflagellates (HNF) are known as most important grazers of bacteria in the biofilm communities. The Choanoflagellida have an essential role in microbial food webs contributing to a process of self-purification of water bodies as well as sponge choanocyte

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2

THOMSEN, HELGE A., KURT R. BUCK, SUSAN L. COALE, DAVID L. GARRISON, and MARCIA M. GOWING. "Loricate choanoflagellates (Acanthoecidae, Choanoflagellida) from the Weddell Sea, Antarctica." Zoologica Scripta 19, no. 4 (1990): 367–87. http://dx.doi.org/10.1111/j.1463-6409.1990.tb00264.x.

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3

Espeland, Gyrid, and Jahn Throndsen. "Flagellates from Kilsfjorden, southern Norway, with description of two new species of Choanoflagellida." Sarsia 71, no. 3-4 (1986): 209–26. http://dx.doi.org/10.1080/00364827.1986.10419691.

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Zolotarev, V. A., E. V. Kuznetsova, and R. A. Fedorov. "The modern methods development for microbiological water quality assessment in lakes." Limnology and Freshwater Biology, no. 4 (2024): 1180–87. http://dx.doi.org/10.31951/2658-3518-2024-a-4-1180.

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The functional diversity of free-living aquatic protozoans is discussed with respect to the feeding ecology, life strategies and water quality. Heterotrophic nanoflagellates (HNF) are known as most important grazers of bacteria in many aquatic ecosystems. Recent studies of flagellate feeding processes indicated that there are significant species-specific variability regarding the food uptake and food selection of bacterivorous flagellates. The Choanoflagellida have an essential role in microbial food webs contributing to a process of self-purification of water bodies as well as are used in mon

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BUCK, KURT R., HARVEY J. MARCHANT, HELGE A. THOMSEN, and DAVID L. GARRISON. "Kakoeca antarctica gen. et sp.n., a loricate choanoflagellate (Acanthoecidae, Choanoflagellida) from Antarctic sea ice with a unique protoplast suspensory membrane." Zoologica Scripta 19, no. 4 (1990): 389–94. http://dx.doi.org/10.1111/j.1463-6409.1990.tb00265.x.

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6

Lefranc, Marie, Aurélie Thénot, Cécile Lepère, and Didier Debroas. "Genetic Diversity of Small Eukaryotes in Lakes Differing by Their Trophic Status." Applied and Environmental Microbiology 71, no. 10 (2005): 5935–42. http://dx.doi.org/10.1128/aem.71.10.5935-5942.2005.

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ABSTRACT Small eukaryotes, cells with a diameter of less than 5 μm, are fundamental components of lacustrine planktonic systems. In this study, small-eukaryote diversity was determined by sequencing cloned 18S rRNA genes in three libraries from lakes of differing trophic status in the Massif Central, France: the oligotrophic Lake Godivelle, the oligomesotrophic Lake Pavin, and the eutrophic Lake Aydat. This analysis shows that the least diversified library was in the eutrophic lake (12 operational taxonomic units [OTUs]) and the most diversified was in the oligomesotrophic lake (26 OTUs). Cert

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Dissanayake, Asha J., Ruvishika S. Jayawardena, Saranyaphat Boonmee, et al. "The status of Myriangiaceae (Dothideomycetes)." Phytotaxa 176, no. 1 (2014): 219–37. https://doi.org/10.11646/phytotaxa.176.1.22.

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Dissanayake, Asha J., Jayawardena, Ruvishika S., Boonmee, Saranyaphat, Thambugala, Kasun M., Tian, Qing, Mapook, Ausana, Senanayake, Indunil C., Yan, Jiye, Li, Yan Mei, Li, Xinghong, Chukeatirote, Ekachai, Hyde, Kevin D. (2014): The status of Myriangiaceae (Dothideomycetes). Phytotaxa 176 (1): 219-237, DOI: 10.11646/phytotaxa.176.1.22, URL: http://dx.doi.org/10.11646/phytotaxa.176.1.22

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Zheng, Bao-Hai, Zhao-Jin Chen, Yu-Ying Li, et al. "Structural Characteristics and Driving Factors of the Planktonic Eukaryotic Community in the Danjiangkou Reservoir, China." Water 12, no. 12 (2020): 3499. http://dx.doi.org/10.3390/w12123499.

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Planktonic eukaryotes are widespread in aquatic ecosystems, and the study of their community composition and driving factors is of great significance to protecting and maintaining the balance of these ecosystems. This study evaluates five typical ecological sites in the Danjiangkou Reservoir—the water source for the project. This was done to comprehensively understand the composition of Danjiangkou Reservoir planktonic eukaryotes, and ensure the ecological balance of the water source for the South-to-North Water Diversion Project. The diversity of the planktonic eukaryotes in surface water and

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9

Zhang, Dapeng, Yanwei Xi, Maria L. Coccimiglio, et al. "Functional prediction and physiological characterization of a novel short trans-membrane protein 1 as a subunit of mitochondrial respiratory complexes." Physiological Genomics 44, no. 23 (2012): 1133–40. http://dx.doi.org/10.1152/physiolgenomics.00079.2012.

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Mitochondrial respiration is mediated by a set of multisubunit assemblies of proteins that are embedded in the mitochondrial inner membranes. Respiratory complexes do not only contain central catalytic subunits essential for the bioenergetic transformation, but also many short trans-membrane subunits (sTMs) that are implicated in the proper assembly of complexes. Defects in sTMs have been discovered in some human neurodegenerative diseases. Here we identify a new subunit that we named Stmp1 and have characterized its function using both computational and experimental approaches. Stmp1 is a sho

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10

Thomsen, Helge Abildhauge, David L. Garrison, and Carol Kosman. "Choanoflagellates (acanthoecidae, choanoflagellida) from the Weddell Sea, Antarctica, Taxonomy and community structure with particular emphasis on the ice biota; with preliminary remarks on choanoflagellates from Arctic sea ice (Northeast Water Polynya, Greenland)." Archiv für Protistenkunde 148, no. 1-2 (1997): 77–114. http://dx.doi.org/10.1016/s0003-9365(97)80038-3.

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11

IkÄvalko, Johanna, Helge Abildhauge Thomsen, and Marina Carstens. "A Preliminary Study of NE Greenland Shallow Meltwater Ponds with Particular Emphasis on Loricate and Scale-covered Forms (Choanoflagellida, Chrysophyceae sensu lato, Synurophyceae, Heliozoea), Including the Descriptions of Epipyxis thamnoides spnovand Pseudokephyrion poculiforme spnov(Chrysophyceae)." Archiv für Protistenkunde 147, no. 1 (1996): 29–42. http://dx.doi.org/10.1016/s0003-9365(96)80006-6.

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12

Hertach, Thomas, and Peter Nagel. "Cicadas in Switzerland: ascientific overview of the historic and current knowledge of apopular taxon (Hemiptera: Cicadidae)." Revue suisse de Zoologie 120, no. 2 (2013): 229–69. https://doi.org/10.5281/zenodo.10114996.

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Hertach, Thomas, Nagel, Peter (2013): Cicadas in Switzerland: ascientific overview of the historic and current knowledge of apopular taxon (Hemiptera: Cicadidae). Revue suisse de Zoologie 120 (2): 229-269, DOI: 10.5281/zenodo.10114996

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13

Lee, Young June. "A checklist of Cicadidae (Insecta: Hemiptera) in Palawan with five new species." Journal of Natural History 43, no. 41-42 (2009): 2617–39. https://doi.org/10.1080/00222930903244002.

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Lee, Young June (2009): A checklist of Cicadidae (Insecta: Hemiptera) in Palawan with five new species. Journal of Natural History 43 (41-42): 2617-2639, DOI: 10.1080/00222930903244002, URL: http://dx.doi.org/10.1080/00222930903244002

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14

D'Alessandro, Paola, Mattia Iannella, Elizabeth Grobbelaar, and Maurizio Biondi. "Taxonomic revision of the Calotheca parvula species group from southern Africa, with descriptions of three new species (Coleoptera, Chrysomelidae)." African Invertebrates 62, no. (1) (2021): 315–37. https://doi.org/10.3897/AfrInvertebr.62.62426.

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Calotheca Heyden, 1887 is a flea beetle genus that occurs predominantly in sub-Saharan Africa, comprising 29 species. The examination of new material is revealing a significantly higher species richness and high intraspecific variability. A group of five species, occurring in the southernmost portion of the distribution range for the genus, is here attributed to the C. parvula species group: C. parvula (Weise, 1908), C. pallida (Bryant, 1945), C. danielssoni sp. nov., C. oberprieleri sp. nov., and C. prinslooi sp. nov. Species in the C. parvula group have strong similarities in body shape and

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15

Lipps, Jere H., and James W. Valentine. "Late Neoproterozoic Metazoa: Weird, Wonderful and Ghostly." Paleontological Society Papers 10 (November 2004): 51–66. http://dx.doi.org/10.1017/s1089332600002333.

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The Late Neoproterozoic or Ediacaran biota contains a variety of enigmatic fossils of uncertain, but likely metazoan, affinities. The protistan group Choanoflagellata and Metazoa share a common ancestor predating the first fossils by perhaps 100's of millions of years. Sponge choanocytes closely resemble choanoflagellates, establishing a morphologic similarity as well. Fossils in the late Neoproterozoic may represent stem or early groups of cnidarians, while others resemble eumetazoans and bilaterians. These organisms occurred on all continents except Antarctica, and occupied four major habita

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16

Thai Tran, Bai, and Binh Tran Thi Thanh. "The limits of subkingdom Protozoa in unicellular Eukarya." Journal of Science Natural Science 66, no. 4F (2021): 161–69. http://dx.doi.org/10.18173/2354-1059.2021-0079.

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According to the five-kingdom system, all unicellular eukaryotes are classified under the kingdom Protista, and multicellular eukaryotes contain only Animals, Plants, and Fungi. This classification is generally not accepted by zoologists. Many zoological textbooks still classify Animals into two large groups: Protozoa and Metazoa. However, the criterion for selecting Protozoa is the specific digestive system of heterotrophic nutrition for animals, thus, the range of Protozoa is often wide, includes many different, far related groups in unicellular eukaryotes. The entire eukaryotic phylogenetic

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17

Alzugaray, María Eugenia, María Victoria Gavazzi, and Jorge Rafael Ronderos. "Calcium signalling in early divergence of Metazoa: mechanisms involved in the control of muscle-like cell contraction in Hydra plagiodesmica." Canadian Journal of Zoology 97, no. 9 (2019): 812–24. http://dx.doi.org/10.1139/cjz-2018-0295.

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Our laboratory has previously examined the effect of neuropeptides on the activity of the hypostome of the hydra Hydra plagiodesmica Dioni, 1968 (Cnidaria: Hydrozoa). These results showed that the hypostome, a structure extruded during feeding, responds to myoregulatory peptides and that this mechanism might be regulated by changes in the cytosolic levels of calcium (Ca2+). We analyse now the ways in which Ca2+ modulates hypostome activity during feeding. The use of calcium chelators confirms that Ca2+ is relevant in inducing hypostome extrusion. The assay of compounds that modulate the activi

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18

Käse, Laura, Alexandra C. Kraberg, Katja Metfies, et al. "Rapid succession drives spring community dynamics of small protists at Helgoland Roads, North Sea." Journal of Plankton Research 42, no. 3 (2020): 305–19. http://dx.doi.org/10.1093/plankt/fbaa017.

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Abstract The dynamics of diatoms and dinoflagellates have been monitored for many decades at the Helgoland Roads Long-Term Ecological Research site and are relatively well understood. In contrast, small-sized eukaryotic microbes and their community changes are still much more elusive, mainly due to their small size and uniform morphology, which makes them difficult to identify microscopically. By using next-generation sequencing, we wanted to shed light on the Helgoland planktonic community dynamics, including nano- and picoplankton, during a spring bloom. We took samples from March to May 201

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19

Mylnikov, Alexander P., Denis V. Tikhonenkov, Sergey A. Karpov, and Claudia Wylezich. "Microscopical Studies on Ministeria vibrans Tong, 1997 (Filasterea) Highlight the Cytoskeletal Structure of the Common Ancestor of Filasterea, Metazoa and Choanoflagellata." Protist 170, no. 4 (2019): 385–96. http://dx.doi.org/10.1016/j.protis.2019.07.001.

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20

Aydin, Esra Elif, and Won Je Lee. "Free-living Heterotrophic Flagellates Lakes in Turkey (Protista) from Two Hypersaline." Acta Protozoologica 61 (December 31, 2022): 85–98. https://doi.org/10.4467/16890027AP.22.008.17111.

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Aydin, Esra Elif, Lee, Won Je (2022): Free-living Heterotrophic Flagellates Lakes in Turkey (Protista) from Two Hypersaline. Acta Protozoologica 61: 85-98, DOI: 10.4467/16890027AP.22.008.17111, URL: http://dx.doi.org/10.4467/16890027ap.22.008.17111

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D'Alessandro, Paola, Mattia Iannella, Elizabeth Grobbelaar, and Maurizio Biondi. "Calotheca nigromaculata species-group from sub-Saharan Africa with descriptions of two new species from KwaZulu-Natal (Chrysomelidae, Galerucinae, Alticini)." ZooKeys 1084 (January 28, 2022): 119–37. https://doi.org/10.3897/zookeys.1084.73175.

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Calotheca Heyden is a flea beetle genus with a largely sub-Saharan distribution and currently comprising 34 species. The examination of new material is revealing an increase in species richness and intraspecific variability. Calotheca carolineae sp. nov. and C. wanati sp. nov., both from KwaZulu-Natal in the Republic of South Africa, are here described and attributed to the C. nigromaculata (Jacoby) species group, mainly based on genitalic characters. Photographs of the main diagnostic characters are provided, including the habitus, median lobe of the aedeagus, and spermatheca. Information on

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Lee, Won Je. "Small Free-Living Heterotrophic Flagellates from Marine Intertidal Sediments of the Sydney Region, Australia." Acta Protozoologica 58, no. 4 (2019): 167–89. https://doi.org/10.4467/16890027AP.19.016.12018.

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Lee, Won Je (2019): Small Free-Living Heterotrophic Flagellates from Marine Intertidal Sediments of the Sydney Region, Australia. Acta Protozoologica 58 (4): 167-189, DOI: 10.4467/16890027AP.19.016.12018, URL: http://dx.doi.org/10.4467/16890027ap.19.016.12018

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23

Frank, Christa. "Auf den Spuren von Lewis und Clark, des "Oregon" und des "California Trails": Ein Reisebericht mit Malakologie "Go West" - Following Lewis und Clark, the "Oregon" and the "California Trail": An itinerary with malacology." Linzer biologische Beiträge 52, no. 1 (2020): 253–308. https://doi.org/10.5281/zenodo.5274305.

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Frank, Christa (2020): Auf den Spuren von Lewis und Clark, des "Oregon" und des "California Trails": Ein Reisebericht mit Malakologie "Go West" - Following Lewis und Clark, the "Oregon" and the "California Trail": An itinerary with malacology. Linzer biologische Beiträge 52 (1): 253-308, DOI: 10.5281/zenodo.5274305

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Aydin, Esra Elif, and Won Je Lee. "Free-living Heterotrophic Flagellates from Intertidal Sediments of Saros Bay, Aegean Sea (Turkey)." Acta Protozoologica 51, no. 2 (2012): 119–37. https://doi.org/10.4467/16890027AP.12.010.0514.

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Aydin, Esra Elif, Lee, Won Je (2012): Free-living Heterotrophic Flagellates from Intertidal Sediments of Saros Bay, Aegean Sea (Turkey). Acta Protozoologica 51 (2): 119-137, DOI: 10.4467/16890027AP.12.010.0514, URL: https://www.mendeley.com/catalogue/6cf3745c-7fc3-3086-8e0b-e266c329ac0d/

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25

Huang, Weihong, Shuantong Li, Saisai Li, Hendrikus J. Laanbroek, and Qiufang Zhang. "Pro- and eukaryotic keystone taxa as potential bio-indicators for the water quality of subtropical Lake Dongqian." Frontiers in Microbiology 14 (April 26, 2023). http://dx.doi.org/10.3389/fmicb.2023.1151768.

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The microbial community plays an important role in the biogeochemical cycles in water aquatic ecosystems, and it is regulated by environmental variables. However, the relationships between microbial keystone taxa and water variables, which play a pivotal role in aquatic ecosystems, has not been clarified in detail. We analyzed the seasonal variation in microbial communities and co-occurrence network in the representative areas taking Lake Dongqian as an example. Both pro- and eukaryotic community compositions were more affected by seasons than by sites, and the prokaryotes were more strongly i

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26

Akter, Salma, M. Shaminur Rahman, Hazrat Ali, et al. "Phylogenetic diversity and functional potential of the microbial communities along the Bay of Bengal coast." Scientific Reports 13, no. 1 (2023). http://dx.doi.org/10.1038/s41598-023-43306-4.

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AbstractThe Bay of Bengal, the world's largest bay, is bordered by populous countries and rich in resources like fisheries, oil, gas, and minerals, while also hosting diverse marine ecosystems such as coral reefs, mangroves, and seagrass beds; regrettably, its microbial diversity and ecological significance have received limited research attention. Here, we present amplicon (16S and 18S) profiling and shotgun metagenomics data regarding microbial communities from BoB’s eastern coast, viz., Saint Martin and Cox’s Bazar, Bangladesh. From the 16S barcoding data, Proteobacteria appeared to be the

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27

Ramond, Pierre, Raffaele Siano, Marc Sourisseau, and Ramiro Logares. "Assembly processes and functional diversity of marine protists and their rare biosphere." Environmental Microbiome 18, no. 1 (2023). http://dx.doi.org/10.1186/s40793-023-00513-w.

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Abstract Background The mechanisms shaping the rare microbial biosphere and its role in ecosystems remain unclear. We developed an approach to study ecological patterns in the rare biosphere and use it on a vast collection of marine microbiomes, sampled in coastal ecosystems at a regional scale. We study the assembly processes, and the ecological strategies constituting the rare protistan biosphere. Using the phylogeny and morpho-trophic traits of these protists, we also explore their functional potential. Results Taxonomic community composition remained stable along rank abundance curves. Con

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28

Sheikh, Shaghayegh, Tomáš Pánek, Ondřej Gahura, et al. "A novel group of dynamin-related proteins shared by eukaryotes and giant viruses is able to remodel mitochondria from within the matrix." Molecular Biology and Evolution, June 6, 2023. http://dx.doi.org/10.1093/molbev/msad134.

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Abstract The diverse GTPases of the dynamin superfamily play various roles in the cell, as exemplified by the dynamin-related proteins (DRPs) Mgm1 and Opa1, which remodel the mitochondrial inner membrane in fungi and metazoans, respectively. Via an exhaustive search of genomic and metagenomic databases we found previously unknown DRP types occurring in diverse eukaryotes and giant viruses (phylum Nucleocytoviricota). One novel DRP clade, termed MidX, combined hitherto uncharacterized proteins from giant viruses and six distantly related eukaryote taxa (Stramenopiles, Telonemia, Picozoa, Amoebo

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29

Junqueira Alves, Chrystian, Júlia Silva Ladeira, Theodore Hannah, et al. "Evolution and Diversity of Semaphorins and Plexins in Choanoflagellates." Genome Biology and Evolution 13, no. 3 (2021). http://dx.doi.org/10.1093/gbe/evab035.

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Abstract Semaphorins and plexins are cell surface ligand/receptor proteins that affect cytoskeletal dynamics in metazoan cells. Interestingly, they are also present in Choanoflagellata, a class of unicellular heterotrophic flagellates that forms the phylogenetic sister group to Metazoa. Several members of choanoflagellates are capable of forming transient colonies, whereas others reside solitary inside exoskeletons; their molecular diversity is only beginning to emerge. Here, we surveyed genomics data from 22 choanoflagellate species and detected semaphorin/plexin pairs in 16 species. Choanofl

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30

Petit, Daniel, Roxana Elin Teppa та Anne Harduin-Lepers. "A phylogenetic view and functional annotation of the animal β1,3-glycosyltransferases of the GT31 CAZy family". Glycobiology, 3 вересня 2020. http://dx.doi.org/10.1093/glycob/cwaa086.

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Abstract The formation of β1,3-linkages on animal glycoconjugates is catalyzed by a subset of β1,3-glycosyltransferases grouped in the Carbohydrate-Active enZYmes family glycosyltransferase-31 (GT31). This family represents an extremely diverse set of β1,3-N-acetylglucosaminyltransferases [B3GNTs and Fringe β1,3-N-acetylglucosaminyltransferases], β1,3-N-acetylgalactosaminyltransferases (B3GALNTs), β1,3-galactosyltransferases [B3GALTs and core 1 β1,3-galactosyltransferases (C1GALTs)], β1,3-glucosyltransferase (B3GLCT) and β1,3-glucuronyl acid transferases (B3GLCATs or CHs). The mammalian enzyme

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Gomis-Rüth, F. Xavier, and Walter Stöcker. "Structural and evolutionary insights into astacin metallopeptidases." Frontiers in Molecular Biosciences 9 (January 4, 2023). http://dx.doi.org/10.3389/fmolb.2022.1080836.

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The astacins are a family of metallopeptidases (MPs) that has been extensively described from animals. They are multidomain extracellular proteins, which have a conserved core architecture encompassing a signal peptide for secretion, a prodomain or prosegment and a zinc-dependent catalytic domain (CD). This constellation is found in the archetypal name-giving digestive enzyme astacin from the European crayfish Astacus astacus. Astacin catalytic domains span ∼200 residues and consist of two subdomains that flank an extended active-site cleft. They share several structural elements including a l

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