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Journal articles on the topic 'Cloning and sequencing'

Author: Grafiati

Published: 4 June 2021

Last updated: 11 February 2022

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1

Haak, Wolfgang, Joachim Burger, and Kurt Werner Alt. "ABO genotyping by PCR-RFLP and cloning and sequencing." Anthropologischer Anzeiger 62, no. 4 (December 16, 2004): 397–410. http://dx.doi.org/10.1127/anthranz/62/2004/397.

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2

Moradas-Ferreira, Pedro. "Gene cloning and sequencing." Biochemical Education 17, no. 4 (October 1989): 215. http://dx.doi.org/10.1016/0307-4412(89)90153-2.

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3

Šimková, H., J. Janda, E. Hřibová, J. Šafář, and J. Doležel. "Cot-based cloning and sequencing of the short arm of wheat chromosome 1B." Plant, Soil and Environment 53, No. 10 (January 7, 2008): 437–41. http://dx.doi.org/10.17221/2195-pse.

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Sequencing of cereal genomes is not a feasible task due to their large size and high content of repetitive DNA sequences. There are two basic approaches to simplify analysis of such genomes: reduced representation approaches, such as EST sequencing, methyl filtration and Cot-based cloning and sequencing; on the other side there is analysis of genomes in a step-wise manner, e.g. through creation of chromosome-specific genomic resources. Combination of both approaches – i.e. Cot-based cloning and sequencing of DNA obtained from a chromosome-arm-specific BAC library – was tested in this work.

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4

Linder, Jodell E., Tatyana E. Plachco, Romina Libster, and E. Kathryn Miller. "Sequencing human rhinoviruses: Direct sequencing versus plasmid cloning." Journal of Virological Methods 211 (January 2015): 64–69. http://dx.doi.org/10.1016/j.jviromet.2014.09.020.

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5

Tang, D., H. Jiang, Y. Zhang, Y. Li, X. Zhang, and T. Zhou. "Cloning and sequencing of the complicated rDNA gene family of Bos taurus." Czech Journal of Animal Science 51, No. 10 (December 5, 2011): 425–28. http://dx.doi.org/10.17221/3960-cjas.

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The rDNA genes coding for ribosomal RNA (rRNA) in animals are repeat sequences with high GC content and complicated structure. Based on the sequences of human ribosomal DNA repeat unit and transcription unit and the long and accurate PCR method with LA Taq DNA polymerase and GC buffer, we were able to amplify the complicated repeat sequences of rDNA genes in Bos taurus. Three rDNA genes and 2 internal transcribed spacer (ITS) fragments were cloned and confirmed by sequencing. The conditions for the cloning of complicated DNA sequences such as special rules of primer design, improvement of the reaction system, selection of DNA polymerase and adjustment of cycle parameters were discussed.  

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6

Nakahama, Kazuo, Koji Yoshimura, Ryuji Marumoto, Masakazu Kikuchi, In Sook Lee, Toshiharu Hase, and Hiroshi Matsubara. "Cloning and sequencing ofSerratiaprotease gene." Nucleic Acids Research 14, no. 14 (1986): 5843–55. http://dx.doi.org/10.1093/nar/14.14.5843.

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7

Lawler, J., M. Duquette, and P. Ferro. "Cloning and sequencing of chicken thrombospondin." Journal of Biological Chemistry 266, no. 13 (May 1991): 8039–43. http://dx.doi.org/10.1016/s0021-9258(18)92936-4.

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8

Darrah, P. M., S. A. Kay, G. R. Teakle, and W. T. Griffiths. "Cloning and sequencing of protochlorophyllide reductase." Biochemical Journal 265, no. 3 (February 1, 1990): 789–98. http://dx.doi.org/10.1042/bj2650789.

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Putative protochlorophyllide reductase cDNA clones (252 and 113) were isolated from an etiolated-oat (Avena sativa) cDNA library. These were used to indirectly characterize a further clone, p127, isolated from a lambda-phage gt11 cDNA library. The latter (1.15 kb in length) was sequenced, and the derived amino acid sequence was shown to be remarkably similar to that derived from chemical analysis of a CNBr-cleavage fragment of the purified reductase, p127 codes for more than 95% of the reductase protein.

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9

Svoboda, P. "Cloning and Sequencing an Inverted Repeat." Cold Spring Harbor Protocols 2009, no. 1 (January 1, 2009): pdb.ip64. http://dx.doi.org/10.1101/pdb.ip64.

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10

Fang, Guo-Hua, Paul Kenigsberg, Milton J. Axley, Mark Nuell, and Lowell P. Hager. "Cloning and sequencing of chloroperoxidase cDNA." Nucleic Acids Research 14, no. 20 (1986): 8061–71. http://dx.doi.org/10.1093/nar/14.20.8061.

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11

Bergström, Sven, Lennart Hansson, Olle Hernell, Bo Lönnerdal, Anna Karin Nilsson, and Mats Strömqvist. "Cloning and sequencing of humanK-casein cDNA." DNA Sequence 3, no. 4 (January 1992): 245–46. http://dx.doi.org/10.3109/10425179209034024.

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12

Jordan, Bertrand R. "Cloning and Sequencing the First HLA Gene." Genetics 184, no. 4 (April 2010): 879–86. http://dx.doi.org/10.1534/genetics.110.113852.

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13

YAMAMOTO, Hiroaki, Sakae TAKEUCHI, Toshiyuki KUDO, Kozo MAKINO, Atsuo NAKATA, Tomotaka SHINODA, and Takuji TAKEUCHI. "Cloning and sequencing of mouse tyrosinase cDNA." Japanese journal of genetics 62, no. 3 (1987): 271–74. http://dx.doi.org/10.1266/jjg.62.271.

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14

Chan, S. S. M., N. Lyons, I. McConnell, and B. A. Blacklaws. "Cloning and sequencing of ovine Flt3 ligand." International Journal of Immunogenetics 34, no. 3 (June 2007): 167–71. http://dx.doi.org/10.1111/j.1744-313x.2007.00659.x.

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15

Ma, Z., T. S. Khatlani, K. Ohno, K. Sasaki, H. Inokuma, and T. Onishi. "Cloning and sequencing of canine MAGE cDNA." Tissue Antigens 56, no. 2 (August 2000): 166–69. http://dx.doi.org/10.1034/j.1399-0039.2000.560210.x.

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16

Anderluh, Gregor, Jože Pungerčar, Borut Štrukelj, Peter Maček, and Franc Gubenšek. "Cloning, Sequencing, and Expression of Equinatoxin II." Biochemical and Biophysical Research Communications 220, no. 2 (March 1996): 437–42. http://dx.doi.org/10.1006/bbrc.1996.0391.

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17

Nakai, Ryohsuke, Kikuo Sen, Shin-ichi Kurosawa, and Hiroshiro Shibai. "Cloning and sequencing analysis ofTRP1gene ofFlammulina velutipes." FEMS Microbiology Letters 190, no. 1 (September 2000): 51–56. http://dx.doi.org/10.1111/j.1574-6968.2000.tb09261.x.

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18

Yamamoto, Shigeo, Tatsuya Funahashi, Hisato Ikai, and Sumio Shinoda. "Cloning and Sequencing of theVibrio parahaemolyticus furGene." Microbiology and Immunology 41, no. 9 (September 1997): 737–40. http://dx.doi.org/10.1111/j.1348-0421.1997.tb01919.x.

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19

Ishiwata, Ken-ichi, Setsuo Yoshino, Satoru Iwamori, Tadashi Suzuki, and Nobuyoshi Makiguchi. "Cloning and Sequencing ofBacillus stearothermophilusTryptophan Synthase Genes." Agricultural and Biological Chemistry 53, no. 11 (November 1989): 2941–48. http://dx.doi.org/10.1080/00021369.1989.10869796.

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20

ICHIMURA, Noriko, Masayuki SHIMOJIMA, Yorihiro NISHIMURA, Yukinobu TOHYA, and Hiroomi AKASHI. "Molecular Cloning and Sequencing of Feline CD7." Journal of Veterinary Medical Science 66, no. 10 (2004): 1255–58. http://dx.doi.org/10.1292/jvms.66.1255.

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21

Isas, J. Mario, Steven M. Yannone, and Barbara K. Burgess. "Azotobacter vinelandiiNADPH:Ferredoxin Reductase Cloning, Sequencing, and Overexpression." Journal of Biological Chemistry 270, no. 36 (September 8, 1995): 21258–63. http://dx.doi.org/10.1074/jbc.270.36.21258.

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22

Cohen, Larry W., Vincent M. Coghlan, and Larry Curtis Dihel. "Cloning and sequencing of papain-encoding cDNA." Gene 48, no. 2-3 (January 1986): 219–27. http://dx.doi.org/10.1016/0378-1119(86)90080-6.

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23

Krieger, J., K. Raming, M. Knipper, M. Grau, S. Mertens, and H. Breer. "Cloning, sequencing and expression of locust tropomyosin." Insect Biochemistry 20, no. 2 (January 1990): 173–84. http://dx.doi.org/10.1016/0020-1790(90)90010-r.

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24

Heath, Stephen. "DNA cloning/sequencing workshop: A short course." FEBS Letters 313, no. 3 (November 30, 1992): 321. http://dx.doi.org/10.1016/0014-5793(92)81222-8.

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25

Hattermann, K., C. Schmitt, D. Soike, and A. Mankertz. "Cloning and sequencing of Duck circovirus (DuCV)." Archives of Virology 148, no. 12 (December 1, 2003): 2471–80. http://dx.doi.org/10.1007/s00705-003-0181-y.

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26

Christiansen, Ingo, and W. Hengstenberg. "Cloning and sequencing of two genes from." MGG Molecular & General Genetics 250, no. 3 (1996): 375. http://dx.doi.org/10.1007/s004380050088.

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27

Houen, G. "Protein sequencing strategies designed for DNA cloning." Journal of Protein Chemistry 11, no. 4 (August 1992): 401–2. http://dx.doi.org/10.1007/bf01673759.

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28

Yoshida, Miho, Yoh-Ichi Shimma, Isao Uno, and Akio Toh-E. "XIII. Yeast sequencing reports. Cloning and sequencing of theNES24 gene ofSaccharomyces cerevisiae." Yeast 10, no. 3 (March 1994): 371–76. http://dx.doi.org/10.1002/yea.320100309.

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29

Hamad, Ibrahim Sulaiman Hamad, Huner Hiwa Arif Arif, and Harem Sabr Muhamad Amin Amin. "Exploring Fungal Diversity and distribution in Dukan Freshwater Lake Using ITS rDNA-based PCR Cloning/ Sequencing." Journal of Zankoy Sulaimani - Part A 19, no. 3&4 (November 22, 2017): 1–8. http://dx.doi.org/10.17656/jzs.10627.

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30

Lockhart, Euan, Lynn Slobbe, Louis Droogmans, Frank Griffin, and Glenn Buchan. "The cloning and sequencing of cervine interleukin 10." DNA Sequence 5, no. 5 (January 1995): 265–68. http://dx.doi.org/10.3109/10425179509030978.

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31

Miranda-vizuete, Antonio, JosÉ Rafael Pedrajas, Anastasios E. Damdimopoulos, and Giannis Spyrou. "Cloning and Sequencing of Mouse Glutaredoxin (grx) cDNA." DNA Sequence 10, no. 3 (January 1999): 179–82. http://dx.doi.org/10.3109/10425179909033944.

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32

Brans, A., A. Loriaux, B. Joris, and J. Dusart. "Cloning and sequencing of thednaKlocus inStreptomyces coelicolorA3 (2)." DNA Sequence 6, no. 3 (January 1996): 179–84. http://dx.doi.org/10.3109/10425179609010207.

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33

Kiermer, VÉRonique, Frank Dequiedt, RÉGine Masengo, Yvette Cleuter, Delphine Briclet, Malgorzata Ciesiolka, Anne Van Den Broeke, et al. "The Cloning and Sequencing of an Ovinec-myccDNA." DNA Sequence 7, no. 3-4 (January 1997): 235–38. http://dx.doi.org/10.3109/10425179709034042.

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34

Doosti, Abbas, Ghasemi Dehkordi, and Hosein Khodabakhsh. "cDNA cloning and sequencing of ostrich Growth hormone." Archives of Biological Sciences 64, no. 2 (2012): 445–49. http://dx.doi.org/10.2298/abs1202445d.

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In recent years, industrial breeding of ostrich (Struthio camelus) has been widely developed in Iran. Growth hormone (GH) is a peptide hormone that stimulates growth and cell reproduction in different animals. The aim of this study was to clone and sequence the ostrich growth hormone gene in E. coli, done for the first time in Iran. The cDNA that encodes ostrich growth hormone was isolated from total mRNA of the pituitary gland and amplified by RT-PCR using GH specific PCR primers. Then GH cDNA was cloned by T/A cloning technique and the construct was transformed into E. coli. Finally, GH cDNA sequence was submitted to the GenBank (Accession number: JN559394). The results of present study showed that GH cDNA was successfully cloned in E. coli. Sequencing confirmed that GH cDNA was cloned and that the length of ostrich GH cDNA was 672 bp; BLAST search showed that the sequence of growth hormone cDNA of the ostrich from Iran has 100% homology with other records existing in GenBank.

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35

Taketani, S., Y. Nakahashi, T. Osumi, and R. Tokunaga. "Molecular cloning, sequencing, and expression of mouse ferrochelatase." Journal of Biological Chemistry 265, no. 32 (November 1990): 19377–80. http://dx.doi.org/10.1016/s0021-9258(17)45378-6.

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36

KIOKA, Noriyuki, Eichi MANABE, Masaki ABE, Hidetaka HASHI, Miki YATO, Mitsuhiro OKUNO, Yoshiaki YAMANO, et al. "Cloning and sequencing of goat growth hormone gene." Agricultural and Biological Chemistry 53, no. 6 (1989): 1583–87. http://dx.doi.org/10.1271/bbb1961.53.1583.

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37

Zhang, Kun, Adam C. Martiny, Nikos B. Reppas, Kerrie W. Barry, Joel Malek, Sallie W. Chisholm, and George M. Church. "Sequencing genomes from single cells by polymerase cloning." Nature Biotechnology 24, no. 6 (May 28, 2006): 680–86. http://dx.doi.org/10.1038/nbt1214.

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38

ALEXANDER, L. J., W. B. LEVINE, C. T. TENG, and C. W. BEATTIE. "Cloning and sequencing of the porcine lactoferrin cDNA." Animal Genetics 23, no. 3 (April 24, 2009): 251–56. http://dx.doi.org/10.1111/j.1365-2052.1992.tb00137.x.

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39

TUTIC, Mevlida, Xiang LU, R. Heiner SCHIRMER, and Dieter WERNER. "Cloning and sequencing of mammalian glutathione reductase cDNA." European Journal of Biochemistry 188, no. 3 (March 1990): 523–28. http://dx.doi.org/10.1111/j.1432-1033.1990.tb15431.x.

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40

Price, G. J., and L. Malone. "Cloning and sequencing of a bovine preproendothelin cDNA." Nucleic Acids Research 18, no. 12 (1990): 3658. http://dx.doi.org/10.1093/nar/18.12.3658.

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41

EARLE, J. A. P., R. A. SKUCE, E. M. HOEY, and S. J. MARTIN. "Molecular cloning and base sequencing of bovine enterovirus." Biochemical Society Transactions 14, no. 2 (April 1, 1986): 472. http://dx.doi.org/10.1042/bst0140472.

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42

Lund, Torben, Jørgen Olsen, and Jens F. Rehfeld. "Cloning and Sequencing of the Bovine Gastrin Gene." Molecular Endocrinology 3, no. 10 (October 1989): 1585–88. http://dx.doi.org/10.1210/mend-3-10-1585.

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43

Williams, Samuel C., and Greg Winter. "Cloning and sequencing of human immunoglobulinλ. gene segments." European Journal of Immunology 23, no. 7 (July 1993): 1456–61. http://dx.doi.org/10.1002/eji.1830230709.

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44

Chopra, S., R. Dolferus, and M. Jacobs. "Cloning and sequencing of the Arabidopsis aldolase gene." Plant Molecular Biology 15, no. 3 (September 1990): 517–20. http://dx.doi.org/10.1007/bf00019171.

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45

Brown, Kevin E., Spencer W. Green, M. Gerard O'Sullivan, and Neal S. Young. "Cloning and Sequencing of the Simian Parvovirus Genome." Virology 210, no. 2 (July 1995): 314–22. http://dx.doi.org/10.1006/viro.1995.1348.

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46

O'farrell, Paul A., Giovanni Sannia, John M. Walker, and Shawn Doonan. "Cloning and Sequencing of Aspartate Aminotransferase fromThermus aquaticusYT1." Biochemical and Biophysical Research Communications 239, no. 3 (October 1997): 810–15. http://dx.doi.org/10.1006/bbrc.1997.7559.

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47

Ai, Yunjun, De-Sheng Tsai, and Teh-hui Kao. "Cloning and sequencing of cDNAs encoding two SSS." Plant Molecular Biology 19, no. 3 (June 1992): 523–28. http://dx.doi.org/10.1007/bf00023404.

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48

Bierbaum, Gabriele, Heike BrÃ¶tz, Klaus-Peter Koller, and Hans-Georg Sahl. "Cloning, sequencing and production of the lantibiotic mersacidin." FEMS Microbiology Letters 127, no. 1-2 (March 1995): 121–26. http://dx.doi.org/10.1111/j.1574-6968.1995.tb07460.x.

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49

Weitzman, Jonathan B. "The Celera paper: sequencing by random shotgun cloning." Genome Biology 2 (2001): spotlight—20010213–01. http://dx.doi.org/10.1186/gb-spotlight-20010213-01.

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50

Kioka, Noriyuki, Eichi Manabe, Masaki Abe, Hidetaka Hashi, Miki Yato, Mitsuhiro Okuno, Yoshiaki Yamano, et al. "Cloning and Sequencing of Goat Growth Hormone Gene." Agricultural and Biological Chemistry 53, no. 6 (June 1989): 1583–87. http://dx.doi.org/10.1080/00021369.1989.10869514.

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