Academic literature on the topic 'Combinatorial species'

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Journal articles on the topic "Combinatorial species"

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Faris, W. "Combinatorial Species and Cluster Expansions." Moscow Mathematical Journal 10, no. 4 (2010): 713–27. http://dx.doi.org/10.17323/1609-4514-2010-10-4-713-727.

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Pemha Binyam, Gabriel Cedric. "Enumerating Structures: Applications of the Hyperoctahedral Group in Combinatorial Species." Advances and Applications in Statistics and Probability 1, no. 1 (2024): 008. https://doi.org/10.17352/aasp.000002.

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Combinatorial species provide a framework for counting and classifying for counting and classifying combinatorial structures. A species assigns a set of structures to each finite set, respecting the notion of isomorphism. This approach facilitates the enumeration of various combinatorial objects. The hyperoctahedral group, also known as the signed permutation group, consists of permutations of a set of signed elements. This group plays a crucial role in combinatorial algebra, particularly in the enumeration of certain structures, such as various types of trees and graphs. Generating series, bo
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Spivak, Aaron T., and Gary D. Stormo. "Combinatorial Cis-regulation in Saccharomyces Species." G3: Genes|Genomes|Genetics 6, no. 3 (2016): 653–67. http://dx.doi.org/10.1534/g3.115.024331.

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Schmitt, William R. "Hopf Algebras of Combinatorial Structures." Canadian Journal of Mathematics 45, no. 2 (1993): 412–28. http://dx.doi.org/10.4153/cjm-1993-021-5.

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AbstractA generalization of the definition of combinatorial species is given by considering functors whose domains are categories of finite sets, with various classes of relations as moronisms. Two cases in particular correspond to species for which one has notions of restriction and quotient of structures. Coalgebras and/or Hopf algebras can be associated to such species, the duals of which provide an algebraic framework for studying invariants of structures.
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Cho, Bongrae, David C. Taylor, Hugh B. Nicholas, and Francis J. Schmidt. "Interacting RNA species identified by combinatorial selection." Bioorganic & Medicinal Chemistry 5, no. 6 (1997): 1107–13. http://dx.doi.org/10.1016/s0968-0896(97)00046-1.

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Rajan, Dayanand S. "The equations DkY = Xn in combinatorial species." Discrete Mathematics 118, no. 1-3 (1993): 197–206. http://dx.doi.org/10.1016/0012-365x(93)90061-w.

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Maia, Manuel, and Miguel Méndez. "On the arithmetic product of combinatorial species." Discrete Mathematics 308, no. 23 (2008): 5407–27. http://dx.doi.org/10.1016/j.disc.2007.09.062.

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Balasubramanian, Krishnan. "Symmetry and Combinatorial Concepts for Cyclopolyarenes, Nanotubes and 2D-Sheets: Enumerations, Isomers, Structures Spectra & Properties." Symmetry 14, no. 1 (2021): 34. http://dx.doi.org/10.3390/sym14010034.

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This review article highlights recent developments in symmetry, combinatorics, topology, entropy, chirality, spectroscopy and thermochemistry pertinent to 2D and 1D nanomaterials such as circumscribed-cyclopolyarenes and their heterocyclic analogs, carbon and heteronanotubes and heteronano wires, as well as tessellations of cyclopolyarenes, for example, kekulenes, septulenes and octulenes. We establish that the generalization of Sheehan’s modification of Pólya’s theorem to all irreducible representations of point groups yields robust generating functions for the enumeration of chiral, achiral,
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Labelle, J., and Y. N. Yeh. "The relation between burnside rings and combinatorial species." Journal of Combinatorial Theory, Series A 50, no. 2 (1989): 269–84. http://dx.doi.org/10.1016/0097-3165(89)90019-8.

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GAMBETTE, PHILIPPE, VINCENT BERRY, and CHRISTOPHE PAUL. "QUARTETS AND UNROOTED PHYLOGENETIC NETWORKS." Journal of Bioinformatics and Computational Biology 10, no. 04 (2012): 1250004. http://dx.doi.org/10.1142/s0219720012500047.

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Phylogenetic networks were introduced to describe evolution in the presence of exchanges of genetic material between coexisting species or individuals. Split networks in particular were introduced as a special kind of abstract network to visualize conflicts between phylogenetic trees which may correspond to such exchanges. More recently, methods were designed to reconstruct explicit phylogenetic networks (whose vertices can be interpreted as biological events) from triplet data. In this article, we link abstract and explicit networks through their combinatorial properties, by introducing the u
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Dissertations / Theses on the topic "Combinatorial species"

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Bibiks, Kirils. "Scheduling and Resource Efficiency Balancing. Discrete Species Conserving Cuckoo Search for Scheduling in an Uncertain Execution Environment." Thesis, University of Bradford, 2017. http://hdl.handle.net/10454/16712.

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The main goal of a scheduling process is to decide when and how to execute each of the project's activities. Despite large variety of researched scheduling problems, the majority of them can be described as generalisations of the resource-constrained project scheduling problem (RCPSP). Because of wide applicability and challenging difficulty, RCPSP has attracted vast amount of attention in the research community and great variety of heuristics have been adapted for solving it. Even though these heuristics are structurally different and operate according to diverse principles, they are designed
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Unosson, Erik. "Antibacterial Strategies for Titanium Biomaterials." Doctoral thesis, Uppsala universitet, Tillämpad materialvetenskap, 2015. http://urn.kb.se/resolve?urn=urn:nbn:se:uu:diva-249181.

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Titanium and titanium based alloys are widely used in dentistry and orthopedics to replace hard tissue and to mend broken bones. It has become a material of choice due to its low density, high strength, good biocompatibility and its capacity to integrate closely with the bone. Today, modern materials and surgical techniques can enable patients to live longer, and aid in maintaining or regaining mobility for a more fulfilling life. There are, however, instances where implants fail, and one of the primary causes for implant failure is infection. This thesis deals with two possible ways of reduci
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Laubie, Paul. "Combinatoire, homotopie et plongements d’opérades." Electronic Thesis or Diss., Strasbourg, 2024. http://www.theses.fr/2024STRAD008.

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Les opérades algébriques sont un outil algébrique permettant d’encoder certaines variétés d’algèbres non-nécessairement associatives, comme les algèbres de Lie ou les algèbres pre-Lie. De plus, les opérades algébriques peuvent elles-mêmes être vues comme des algèbres dans une catégorie bien choisie. Cette remarque permet l’étude des opérades via les puissants outils de l’algèbre homologique. En parallèle, la catégorie monoïdale telle que les objets en monoïde de cette catégorie sont les opérades est la catégorie des espèces combinatoires munie du pléthysme. Cela permet d’adopter un point de vu
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Akin, Banu. "Approaches For Special Multiobjective Combinatorial Optimization Problems With Side Constraints." Master's thesis, METU, 2012. http://etd.lib.metu.edu.tr/upload/12614603/index.pdf.

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We propose a generic algorithm based on branch-and-bound to generate all efficient solutions of multiobjective combinatorial optimization (MOCO) problems. We present an algorithm specific to multiobjective 0-1 Knapsack Problem based on the generic algorithm. We test the performance of our algorithm on randomly generated sample problems against IBM ILOG CPLEX and we obtain better performance using a problem specific algorithm. We develop a heuristic algorithm by incorporating memory limitations at the expense of solution quality to overcome memory issues of the exact algorithm.
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Thormann, Verena [Verfasser]. "Genomic Deletion of Enhancers Uncovers Principles of Combinatorial Regulation and Cell Type-Specific Gene Expression / Verena Thormann". Berlin : Freie Universität Berlin, 2018. http://d-nb.info/1150704594/34.

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Wagner, David R. "Schur Rings Over Projective Special Linear Groups." BYU ScholarsArchive, 2016. https://scholarsarchive.byu.edu/etd/6089.

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This thesis presents an introduction to Schur rings (S-rings) and their various properties. Special attention is given to S-rings that are commutative. A number of original results are proved, including a complete classification of the central S-rings over the simple groups PSL(2,q), where q is any prime power. A discussion is made of the counting of symmetric S-rings over cyclic groups of prime power order. An appendix is included that gives all S-rings over the symmetric group over 4 elements with basic structural properties, along with code that can be used, for groups of comparatively smal
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Davis, Justin Sean. "The Development of Leibniz’s Substance Ontology From 1666-1688." Scholar Commons, 2006. http://scholarcommons.usf.edu/etd/3927.

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Leibniz’s early conception of individual substance ontology is one of the most puzzling, and fascinating, within the history of philosophy. It is the purpose of this paper to show that: 1) Leibniz did develop a coherent scheme that embodied his substance ontology, 2) the exposition of his early substance ontology is in A Specimen of the Discoveries of the Admirable Secrets of Nature in General, written in 1688 and, 3) the scheme is not sufficiently represented in the Discourse on Metaphysics. Leibniz slowly developed a multifaceted view of substance within the twenty years previous to the writ
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Akin, Alper. "Optimum Design Of Reinforced Concrete Plane Frames Using Harmony Search Algorithm." Phd thesis, METU, 2010. http://etd.lib.metu.edu.tr/upload/12612293/index.pdf.

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In this thesis, the optimum design algorithm is presented for reinforced concrete special moment frames. The objective function is considered as the total cost of reinforced concrete frame which includes the cost of concrete, formwork and reinforcing steel bars. The cost of any component is inclusive of material, fabrication and labor. The design variables in beams are selected as the width and the depth of beams in each span, the diameter and the number of longitudinal reinforcement bars along the span and supports. In columns the width and the depth of the column section, the number and the
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Books on the topic "Combinatorial species"

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1944-, Labelle Gilbert, and Leroux P. 1942-, eds. Combinatorial species and tree-like structures. Cambridge University Press, 1998.

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1974-, Mahajan Swapneel Arvind, ed. Monoidal functors, species, and Hopf algebras. American Mathematical Society, 2010.

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1998), KAIST Mathematics Workshop (13th. Combinatorics and special functions. Korea Advanced Institute of Science and Technology, Mathematics Research Center, 1998.

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Pillwein, Veronika, and Carsten Schneider, eds. Algorithmic Combinatorics: Enumerative Combinatorics, Special Functions and Computer Algebra. Springer International Publishing, 2020. http://dx.doi.org/10.1007/978-3-030-44559-1.

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1957-, Cook William, Lovász László 1948-, Seymour Paul D, and NSF Science and Technology Center in Discrete Mathematics and Theoretical Computer Science., eds. Combinatorial optimization: Papers from the DIMACS Special Year. American Mathematical Society, 1995.

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Frank, Garvan, and SpringerLink (Online service), eds. Partitions, q-Series, and Modular Forms. Springer Science+Business Media, LLC, 2012.

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AMS Special Session in Combinatorial Group Theory--Infinite Groups (1988 University of Maryland, College Park). Combinatorial group theory: Proceedings of the AMS special session in combinatorial group theory-infinite groups, April 23-24, 1988. Edited by Fine Benjamin 1948-, Gaglione Anthony M, Tang, Francis C. Y., 1935-, and American Mathematical Society. American Mathematical Society, 1990.

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Garvan, Frank G., and Mourad E. H. Ismail, eds. Symbolic Computation, Number Theory, Special Functions, Physics and Combinatorics. Springer US, 2002. http://dx.doi.org/10.1007/978-1-4613-0257-5.

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1955-, Garvan Frank, and Ismail Mourad 1944-, eds. Symbolic computation, number theory, special functions, physics, and combinatorics. Kluwer Academic Publishers, 2001.

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1940-, Kramer Earl S., and Magliveras Spyros S. 1938-, eds. Finite geometries and combinatorial designs: Proceedings of the AMS Special Session in Finite Geometries and Combinatorial Designs, held October 29-November 1, 1987. American Mathematical Society, 1990.

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Book chapters on the topic "Combinatorial species"

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Cartier, Pierre, and Frédéric Patras. "Combinatorial Hopf Algebras, Twisted Structures, and Species." In Algebra and Applications. Springer International Publishing, 2021. http://dx.doi.org/10.1007/978-3-030-77845-3_9.

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Krüger, Jochen. "Enolates and Related Species in Combinatorial and Solid-Phase Synthesis." In Handbook of Combinatorial Chemistry. Wiley-VCH Verlag GmbH & Co. KGaA, 2004. http://dx.doi.org/10.1002/3527603034.ch18.

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Zheng, Yu, Taoyang Wu, and Louxin Zhang. "A Linear-Time Algorithm for Reconciliation of Non-binary Gene Tree and Binary Species Tree." In Combinatorial Optimization and Applications. Springer International Publishing, 2013. http://dx.doi.org/10.1007/978-3-319-03780-6_17.

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Song, Chunwei. "Combinatorial Statistics." In Lattice Path Combinatorics and Special Counting Sequences. CRC Press, 2024. http://dx.doi.org/10.1201/9781003509912-2.

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Nemhauser, George, and Laurence Wolsey. "Special-Purpose Algorithms." In Integer and Combinatorial Optimization. John Wiley & Sons, Inc., 2014. http://dx.doi.org/10.1002/9781118627372.ch12.

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Nemhauser, George, and Laurence Wolsey. "Applications of Special-Purpose Algorithms." In Integer and Combinatorial Optimization. John Wiley & Sons, Inc., 2014. http://dx.doi.org/10.1002/9781118627372.ch13.

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Amir, Amihood, Gad M. Landau, Moshe Lewenstein, and Noa Lewensteint. "Efficient special cases of pattern matching with swaps." In Combinatorial Pattern Matching. Springer Berlin Heidelberg, 1998. http://dx.doi.org/10.1007/bfb0030791.

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Gurski, Frank, Dominique Komander, and Carolin Rehs. "Characterizations for Special Directed Co-graphs." In Combinatorial Optimization and Applications. Springer International Publishing, 2019. http://dx.doi.org/10.1007/978-3-030-36412-0_20.

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Kung, Joseph P. S. "Combinatorics in finite lattices." In Lattice Theory: Special Topics and Applications. Springer International Publishing, 2014. http://dx.doi.org/10.1007/978-3-319-06413-0_6.

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Biró, Péter, and Iain McBride. "Integer Programming Methods for Special College Admissions Problems." In Combinatorial Optimization and Applications. Springer International Publishing, 2014. http://dx.doi.org/10.1007/978-3-319-12691-3_32.

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Conference papers on the topic "Combinatorial species"

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Xu, Lily, Arpita Biswas, Fei Fang, and Milind Tambe. "Ranked Prioritization of Groups in Combinatorial Bandit Allocation." In Thirty-First International Joint Conference on Artificial Intelligence {IJCAI-22}. International Joint Conferences on Artificial Intelligence Organization, 2022. http://dx.doi.org/10.24963/ijcai.2022/723.

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Preventing poaching through ranger patrols protects endangered wildlife, directly contributing to the UN Sustainable Development Goal 15 of life on land. Combinatorial bandits have been used to allocate limited patrol resources, but existing approaches overlook the fact that each location is home to multiple species in varying proportions, so a patrol benefits each species to differing degrees. When some species are more vulnerable, we ought to offer more protection to these animals; unfortunately, existing combinatorial bandit approaches do not offer a way to prioritize important species. To
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Herbol, Henry, Matthias Poloczek, and Paulette Clancy. "Taming the Large Combinatorial Species Space for Hybrid Organic-Inorganic Perovskites via Bayesian Optimization." In 1st Interfaces in Organic and Hybrid Thin-Film Optoelectronics. Fundació Scito, 2019. http://dx.doi.org/10.29363/nanoge.inform.2019.069.

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Bogojevic, Oliver, Carl Arevang, and Zheng Guo. "Synthesis of complex phospholipid species." In 2022 AOCS Annual Meeting & Expo. American Oil Chemists' Society (AOCS), 2022. http://dx.doi.org/10.21748/rlyh7861.

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Phospholipids are essential for the preservation of life on the planet and carry numerous critical roles and functions, including being the main constituents of the cell-membranes in both eukaryotic and prokaryotic cells, providing (more bioavailable) energy, and maintaining chemical and electrical processes in the body. The structural characteristics of phospholipids can vary greatly among species, however, commonly consist of a hydrophilic region (phosphate-containing head-group) and a hydrophobic region (fatty acids, €œtails€), providing the amphiphilic features and unique functions. The c
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Hahm, Jungyoon, and Ali Beskok. "Flow and Species Transport Control in Grooved Micro-Channels." In ASME 2005 International Mechanical Engineering Congress and Exposition. ASMEDC, 2005. http://dx.doi.org/10.1115/imece2005-82111.

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We demonstrate flow control concepts in a grooved micro-channel using selectively patterned, electroosmotically active surfaces and locally applied electric fields. This framework enables formation of rather complex flow patterns in simple micro-geometries. Ability to vary the electric field magnitude and its polarity also manifests time-dependent flow alterations, which results in flow and species transport control abilities. The results obtained in a single micro-groove constitute the proof of concept for flow and species transport control in an integrated serial micro-fluidic process, where
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Jiang, Chunheng, Jianxi Gao, and Malik Magdon-Ismail. "Inferring Degrees from Incomplete Networks and Nonlinear Dynamics." In Twenty-Ninth International Joint Conference on Artificial Intelligence and Seventeenth Pacific Rim International Conference on Artificial Intelligence {IJCAI-PRICAI-20}. International Joint Conferences on Artificial Intelligence Organization, 2020. http://dx.doi.org/10.24963/ijcai.2020/457.

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Inferring topological characteristics of complex networks from observed data is critical to understand the dynamical behavior of networked systems, ranging from the Internet and the World Wide Web to biological networks and social networks. Prior studies usually focus on the structure-based estimation to infer network sizes, degree distributions, average degrees, and more. Little effort attempted to estimate the specific degree of each vertex from a sampled induced graph, which prevents us from measuring the lethality of nodes in protein networks and influencers in social networks. The current
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CARPI, ARTURO, ALDO DE LUCA, and STEFANO VARRICCHIO. "SPECIAL FACTORS IN SOME COMBINATORIAL STRUCTURES." In Proceedings of the 4th International Conference. WORLD SCIENTIFIC, 2000. http://dx.doi.org/10.1142/9789812792464_0001.

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Simsek, Yilmaz. "On combinatorial type numbers related to some special numbers." In INTERNATIONAL CONFERENCE OF NUMERICAL ANALYSIS AND APPLIED MATHEMATICS (ICNAAM 2016). Author(s), 2017. http://dx.doi.org/10.1063/1.4992451.

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Kilar, Neslihan. "Remarks on combinatorial numbers containing special numbers and polynomials." In INTERNATIONAL CONFERENCE OF NUMERICAL ANALYSIS AND APPLIED MATHEMATICS: ICNAAM2022. AIP Publishing, 2024. http://dx.doi.org/10.1063/5.0210513.

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Gasparyan, Armenak Sokratovich. "Combinatorial identities over recurrent sequences." In Academician O.B. Lupanov 14th International Scientific Seminar "Discrete Mathematics and Its Applications". Keldysh Institute of Applied Mathematics, 2022. http://dx.doi.org/10.20948/dms-2022-45.

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The article presents several general identities, special cases which are many well-known identities such as, for example, Cassini, Catalan, Taguiri identities for Fibonacci numbers, their analogues and generalizations to other Fibonacci-type numbers.
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SHUM, K. P. "RPP SEMIGROUPS, ITS GENERALIZATIONS AND SPECIAL SUBCLASSES." In Proceedings of the Second International Congress in Algebra and Combinatorics. WORLD SCIENTIFIC, 2008. http://dx.doi.org/10.1142/9789812790019_0020.

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