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Journal articles on the topic 'Control sequence'

Author: Grafiati

Published: 25 May 2024

Last updated: 31 July 2025

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1

Elacqua, Elizabeth, Stephen J. Koehler, and Jinzhen Hu. "Electronically Governed ROMP: Expanding Sequence Control for Donor–Acceptor Conjugated Polymers." Synlett 31, no. 15 (2020): 1435–42. http://dx.doi.org/10.1055/s-0040-1707180.

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Controlling the primary sequence of synthetic polymers remains a grand challenge in chemistry. A variety of methods that exert control over monomer sequence have been realized wherein differential reactivity, pre-organization, and stimuli-response have been key factors in programming sequence. Whereas much has been established in nonconjugated systems, π-extended frameworks remain systems wherein subtle structural changes influence bulk properties. The recent introduction of electronically biased ring-opening metathesis polymerization (ROMP) extends the repertoire of feasible approaches to pre

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2

Fatchiyah, Fatchiyah, Rista Nikmatu Rohmah, Lidwina Faraline Tripisila, et al. "Three-dimension Glyceraldehyde-3-Phosphate Dehydrogenase protein structure of substitution and insertion sequences of GAPDH gene of chicken drumstick meat (Gallus gallus)." Berkala Penelitian Hayati 27, no. 2 (2022): 105–9. http://dx.doi.org/10.23869/bphjbr.27.2.20228.

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The study aimed to observed the 3-D structure of GAPDH protein and identify the GAPDH gene sequences mutation of chicken drumstick meat (Gallus gallus). The sample of chicken meat was randomly taken in four districts in Malang city. In this study, the DNA was isolated from drumstick meat chicken samples, amplified using proper primers, and then sequenced using ABI 3730xl DNA Sequencer. The DNA sequences alignments analyzed by BioEdit software and the control sequence of GAPDH gene was obtained from NCBI GenBank (sequence Gene ID: 374193). Then, the amino acid sequence and 3D structure of GAPDH

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3

Buehler, Deborah M., and Allan J. Baker. "Characterization of the red knot (Calidris canutus) mitochondrial control region." Genome 46, no. 4 (2003): 565–72. http://dx.doi.org/10.1139/g03-034.

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We sequenced the complete mitochondrial control regions of 11 red knots (Calidris canutus). The control region is 1168 bp in length and is flanked by tRNA glutamate (glu) and the gene ND6 at its 5' end and tRNA phenylalanine (phe) and the gene 12S on its 3' end. The sequence possesses conserved sequence blocks F, E, D, C, CSB-1, and the bird similarity box (BSB), as expected for a mitochondrial copy. Flanking tRNA regions show correct secondary structure, and a relative rate test indicated no significant difference between substitution rates in the sequence we obtained versus the known mitocho

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4

Liu, Huanzhang, Chyng-Shyan Tzeng, and Hui-Yu Teng. "Sequence variations in the mitochondrial DNA control region and their implications for the phylogeny of the Cypriniformes." Canadian Journal of Zoology 80, no. 3 (2002): 569–81. http://dx.doi.org/10.1139/z02-035.

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The mitochondrial DNA control region of six cobitids and two catostomids was sequenced and compared with sequences of other cypriniforms to study their sequence variations. The extended termination associated sequence (ETAS) domain, central domain, and conserved sequence block (CSB) domain were partitioned and the ETAS sequence, CSB-D, CSB-E, ECSB-F, CSB1, CSB2, and CSB3 were identified. It is suggested that the "hairpin" TACAT-ATGTA is the key sequence of ETAS and GACATA is the symbol of CSB1. Phylogenetic analysis based on the CSB domain showed that all cyprinids evolved as one monophyletic

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STEFANNI, S., I. S. CHEN, and P. J. MILLER. "A very compact mt-DNA control region in the widely distributed goby Pomatoschistus minutus (Teleostei: Gobiidae)." Journal of the Marine Biological Association of the United Kingdom 82, no. 6 (2002): 1001–3. http://dx.doi.org/10.1017/s0025315402006525.

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The control region of the mitochondrial genome was amplified and sequenced for six individuals of the gobioid fish Pomatoschistus minutus, from several European localities, and one specimen of the related Deltentosteus quadrimaculatus. The length of this region for the former species was found to be 773 bp, 7·1% shorter than that previously described as the most compact D-loop known among teleosts. Sequences from other fish have been compared and the largest gap falls in the section between the conserved sequence block and the pyrimidine tract. Alignment of P. minutus sequences was done with D

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6

Stromer, Robert, and Harry A. Mackay. "Conditional Stimulus Control of Childrens' Sequence Production." Psychological Reports 70, no. 3 (1992): 903–12. http://dx.doi.org/10.2466/pr0.1992.70.3.903.

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Normally capable children were first taught to touch in sequence each of a set of five physically dissimilar stimuli (Sequence A). Another set of stimuli was then used to train sequence B. Next, direct training established conditional control of the production of the A sequence and its reversal: in the presence of one printed word, touching the stimuli in the order A1→A2→A3→A4→A5 was reinforced; in the presence of another word, touching the stimuli in the order A5→A4→A3→A2→A1 was reinforced. During probe sessions, the printed words also exercised conditional control over production of the B se

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7

Quevedo, Daniel E., and Vijay Gupta. "Sequence-Based Anytime Control." IEEE Transactions on Automatic Control 58, no. 2 (2013): 377–90. http://dx.doi.org/10.1109/tac.2012.2209977.

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8

Melo, Princess Marie B. "An Enhanced Transmission Control Protocol Initial Sequence Number Steganographic Method." Journal of Advanced Research in Dynamical and Control Systems 12, no. 01-Special Issue (2020): 252–59. http://dx.doi.org/10.5373/jardcs/v12sp1/20201070.

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9

Okur, Muhammet Ali. "General logarithmic control modulo and Tauberian remainder theorems." Communications Faculty Of Science University of Ankara Series A1Mathematics and Statistics 73, no. 2 (2023): 391–98. http://dx.doi.org/10.31801/cfsuasmas.1380675.

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Let $\lambda=(\lambda_n)$ be a nondecreasing sequence of positive numbers such that $\lambda_n\to\infty$. A sequence $(\xi_n)$ is called $\lambda$-bounded if \begin{equation*} \lambda_n(\xi_n-\alpha)=O(1)\end{equation*} with the limit $\displaystyle{\lim_{n\rightarrow \infty}\xi_n=\alpha}$. In this work, we obtain several Tauberian remainder theorems on $\lambda$-bounded sequences for the logarithmic summability method with help of general logarithmic control modulo of the oscillatory behavior. Tauber conditions in our main results are on the generator sequence and the general logarithmic cont

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10

Perkin, Lindsey C., Timothy P. L. Smith, and Brenda Oppert. "Variants in the Mitochondrial Genome Sequence of Rhyzopertha dominica (Fabricius) (Coleoptera: Bostrycidae)." Insects 12, no. 5 (2021): 387. http://dx.doi.org/10.3390/insects12050387.

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The lesser grain borer, Rhyzopertha dominica, is a coleopteran pest of stored grains and is mainly controlled by phosphine fumigation, but the increase in phosphine-resistant populations threatens efficacy. Some phosphine-resistant insects have reduced respiration, and thus studying the mitochondrial genome may provide additional information regarding resistance. Genomic DNA from an inbred laboratory strain of R. dominica was extracted and sequenced with both short (Illumina) and long (Pacific Biosciences) read technologies for whole genome sequence assembly and annotation. Short read sequence

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11

Ampini, Dieudonne, and Mabonzo Vital Delmas. "Existence of Optimal Control for a Nonlinear Partial Differential Equation of Hyperbolic Type." European Journal of Pure and Applied Mathematics 12, no. 4 (2019): 1595–601. http://dx.doi.org/10.29020/nybg.ejpam.v12i4.3577.

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In this paper, we prove the existence of an optimal control for a nonlinear hyperbolic problem, examined in [3]. An estimation is used which makes it possible to extract from a minimizable sequence of controls and from the sequence of corresponding solutions weakly convergent sub sequences. To prove the passage to the limit in a true equality for every element of the minimizable sequence, Lebesgue’s theorem on the passage to the limit under the integral sign and the theorem of immersion have been used.

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12

Choi, Heejin, and Minsoo Hahn. "Sequence-to-Sequence Emotional Voice Conversion With Strength Control." IEEE Access 9 (2021): 42674–87. http://dx.doi.org/10.1109/access.2021.3065460.

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Dueñas, Juan C. Rondan, Cristina N. Gardenal, Guillermo Albrieu Llinás, and Graciela M. Panzetta-Dutari. "Structural organization of the mitochondrial DNA control region in Aedes aegypti." Genome 49, no. 8 (2006): 931–37. http://dx.doi.org/10.1139/g06-053.

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The complete A+T - rich region of Aedes aegypti mitochondrial DNA has been cloned and sequenced. In Argentinean populations of the species, a polymorphism in the length of the amplified fragment was observed. Nucleotide sequence comparison of the shortest and longest A+T - rich amplified fragments detected revealed the presence of 2 types of tandemly repeated blocks. The size variation observed in natural populations is mainly due to the presence of a variable number of a 181 bp tandem repeat unit, located toward the 12S rRNA gene end. The size of the longest A+T - rich region was of 2070 bp,

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14

Sanson, Gerdine F. O., and Marcelo R. S. Briones. "Typing of Candida glabrata in Clinical Isolates by Comparative Sequence Analysis of the Cytochrome c Oxidase Subunit 2 Gene Distinguishes Two Clusters of Strains Associated with Geographical Sequence Polymorphisms." Journal of Clinical Microbiology 38, no. 1 (2000): 227–35. http://dx.doi.org/10.1128/jcm.38.1.227-235.2000.

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ABSTRACT We tested whether comparative sequence analysis of the mitochondrion-encoded cytochrome c oxidase subunit 2 gene ( COX2 ) could be used to distinguish intraspecific variants of Candida glabrata . Mitochondrial genes are suitable for investigation of close phylogenetic relationships because they evolve much faster than nuclear genes, which in general exhibit very limited intraspecific variation. For this survey we used 11 clinical isolates of C. glabrata from three different geographical locations in Brazil, 10 isolates from one location in the United States, 1 American Type Culture Co

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15

Bo, J., and R. D. Seidler. "Visuospatial Working Memory Capacity Predicts the Organization of Acquired Explicit Motor Sequences." Journal of Neurophysiology 101, no. 6 (2009): 3116–25. http://dx.doi.org/10.1152/jn.00006.2009.

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Studies have suggested that cognitive processes such as working memory and temporal control contribute to motor sequence learning. These processes engage overlapping brain regions with sequence learning, but concrete evidence has been lacking. In this study, we determined whether limits in visuospatial working memory capacity and temporal control abilities affect the temporal organization of explicitly acquired motor sequences. Participants performed an explicit sequence learning task, a visuospatial working memory task, and a continuous tapping timing task. We found that visuospatial working

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16

Shih, Y. Y., and D. Chao. "Sequence of Control in S3PMR." Computer Journal 53, no. 10 (2009): 1691–703. http://dx.doi.org/10.1093/comjnl/bxp081.

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17

Badi, Nezha, and Jean-François Lutz. "Sequence control in polymer synthesis." Chemical Society Reviews 38, no. 12 (2009): 3383. http://dx.doi.org/10.1039/b806413j.

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18

Ozguner, U. "Three-course control laboratory sequence." IEEE Control Systems Magazine 9, no. 3 (1989): 14–18. http://dx.doi.org/10.1109/37.24806.

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19

Tverdokhlebov, V. A. "Models of Functional Dependencies of Elements in Sequences for Solving Problems of Control and Management." Mekhatronika, Avtomatizatsiya, Upravlenie 20, no. 10 (2019): 579–88. http://dx.doi.org/10.17587/mau.20.579-588.

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In paper developed version of the basic concepts, models and methods for the formulation and solution of problems of control and diagnosing of processes in systems, tasks of constructing models of processes in which the causal relationships of events are transformed into functional dependencies between elements in sequences, problems of formalizing of process control rules, etc. For this extended classical recurrent definition of the sequences, which presents the functional elements depending on the immediately preceding to them m elements to offered Z-recurrent definition, which defines the f

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20

Martin, B. K., and J. H. Weis. "Functional identification of transcription control sequences of the mouse Crry gene." Journal of Immunology 151, no. 2 (1993): 857–69. http://dx.doi.org/10.4049/jimmunol.151.2.857.

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Abstract The mouse C receptor-related gene Crry is expressed by a wide variety of cells. Those sequences required for the transcriptional control of this gene were identified by deletion analysis of regions 5' of the initiating ATG. Fusion of Crry promoter sequences to the reporter gene CAT identified a region approximately 1,500 bp upstream of the transcriptional start site that enhanced transcription of this gene construct. Gel shift and methylation interference assays were performed, and a specific protein-DNA complex was identified within this region. These assays defined a 16-bp sequence

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21

Mellmann, Alexander, Paal Skytt Andersen, Stefan Bletz, et al. "High Interlaboratory Reproducibility and Accuracy of Next-Generation-Sequencing-Based Bacterial Genotyping in a Ring Trial." Journal of Clinical Microbiology 55, no. 3 (2017): 908–13. http://dx.doi.org/10.1128/jcm.02242-16.

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ABSTRACTToday, next-generation whole-genome sequencing (WGS) is increasingly used to determine the genetic relationships of bacteria on a nearly whole-genome level for infection control purposes and molecular surveillance. Here, we conducted a multicenter ring trial comprising five laboratories to determine the reproducibility and accuracy of WGS-based typing. The participating laboratories sequenced 20 blind-codedStaphylococcus aureusDNA samples using 250-bp paired-end chemistry for library preparation in a single sequencing run on an Illumina MiSeq sequencer. The run acceptance criteria were

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22

Farinha, Mark A., and Andrew M. Kropinski. "Overexpression, purification, and analysis of the c1 repressor protein of Pseudomonas aeruginosa bacteriophage D3." Canadian Journal of Microbiology 43, no. 3 (1997): 220–26. http://dx.doi.org/10.1139/m97-030.

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A 3.1-kb region of the bacteriophage D3 genome which contains the immunity functions has recently been sequenced (GenBank accession No. L22692). Sequence analysis indicated the presence of a putative repressor gene (c1) whose protein product functions to maintain the bacteriophage genome as a stably integrated prophage in the chromosome of Pseudomonas aeruginosa. A plasmid was constructed that overexpresses repressor C1 protein under control of Ptac in Escherichia coli. C1 protein was subsequently purified and characterized as a 223 amino acid protein with specific binding affinity for 14-base

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23

Cordsmeier, Arne, Christopher Bednar, Sabrina Kübel, Larissa Bauer, and Armin Ensser. "Re-Analysis of the Widely Used Recombinant Murine Cytomegalovirus MCMV-m157luc Derived from the Bacmid pSM3fr Confirms Its Hybrid Nature." International Journal of Molecular Sciences 24, no. 18 (2023): 14102. http://dx.doi.org/10.3390/ijms241814102.

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Murine cytomegalovirus (MCMV), and, in particular, recombinant virus derived from MCMV-bacmid pSM3fr, is widely used as the small animal infection model for human cytomegalovirus (HCMV). We sequenced the complete genomes of MCMV strains and recombinants for quality control. However, we noticed deviances from the deposited reference sequences of MCMV-bacmid pSM3fr. This prompted us to re-analyze pSM3fr and reannotate the reference sequence, as well as that for the commonly used MCMV-m157luc reporter virus. A correct reference sequence for this frequently used pSM3fr, containing a repaired versi

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Chen, H., R. Vinnakota, and S. J. Flint. "Intragenic activating and repressing elements control transcription from the adenovirus IVa2 initiator." Molecular and Cellular Biology 14, no. 1 (1994): 676–85. http://dx.doi.org/10.1128/mcb.14.1.676-685.1994.

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The downstream stimulatory segment of the adenovirus type 2 IVa promoter includes a TA-rich sequence that binds recombinant TATA-binding proteins (TBP) in vitro. We now demonstrate that when placed upstream of the IVa2, initiator, this TA-rich sequence operated as a TATA element but exhibited significantly lower transcriptional and TBP-binding activities than did the TATA box of the adenovirus major late (ML) promoter. In sharp contrast, changing the IVa2 TA-rich sequence in its natural, intragenic context to the ML TATA sequence increased the activity of the IVa2 promoter only slightly. In vi

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Chen, H., R. Vinnakota, and S. J. Flint. "Intragenic activating and repressing elements control transcription from the adenovirus IVa2 initiator." Molecular and Cellular Biology 14, no. 1 (1994): 676–85. http://dx.doi.org/10.1128/mcb.14.1.676.

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The downstream stimulatory segment of the adenovirus type 2 IVa promoter includes a TA-rich sequence that binds recombinant TATA-binding proteins (TBP) in vitro. We now demonstrate that when placed upstream of the IVa2, initiator, this TA-rich sequence operated as a TATA element but exhibited significantly lower transcriptional and TBP-binding activities than did the TATA box of the adenovirus major late (ML) promoter. In sharp contrast, changing the IVa2 TA-rich sequence in its natural, intragenic context to the ML TATA sequence increased the activity of the IVa2 promoter only slightly. In vi

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WalkerPeach, Cindy R., Matthew Winkler, Dwight B. DuBois, and Brittan L. Pasloske. "Ribonuclease-resistant RNA Controls (Armored RNA) for Reverse Transcription-PCR, Branched DNA, and Genotyping Assays for Hepatitis C Virus." Clinical Chemistry 45, no. 12 (1999): 2079–85. http://dx.doi.org/10.1093/clinchem/45.12.2079.

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Abstract Background: Comparison and evaluation of molecular diagnostic assays for the detection and quantification of hepatitis C virus (HCV) RNA have been limited by the lack of RNA controls and calibrators. Armored RNA® technology is a means for producing RNA that is completely protected from plasma ribonucleases. This method produces recombinant pseudoviral particles that are noninfectious and contain predefined RNA sequences. Methods: A consensus 412-base sequence from the 5′NCR/Core region of HCV subtype 2b was derived from 34 individually sequenced HCV genotype 2b variants. A DNA fragmen

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Tian, Tingting, Yanhan Wen, Liping Gao, et al. "Rapidly obtaining genome sequence of Severe Fever with Thrombocytopenia Syndrome virus directly from clinical serum specimen using long amplicon based nanopore sequencing workflow." PLOS One 20, no. 4 (2025): e0321218. https://doi.org/10.1371/journal.pone.0321218.

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Severe Fever with Thrombocytopenia Syndrome (SFTS) is an emerging viral infectious disease discovered in 2009 with a high fatality rate and continuing to pose a public threat for many countries. Surveillance of genome sequence of its causative pathogen, Severe Fever with Thrombocytopenia Syndrome virus (SFTSV), could provide evidence for SFTS control, diagnosis method update, viral evolution dynamic and pathogenic mechanism research, etc. Here, we developed a workflow for rapidly obtaining the genome sequence of SFTSV directly from clinical samples to facilitate the viral genome sequence surve

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28

Ritchie, Peter A., and David M. Lambert. "A repeat complex in the mitochondrial control region of Adélie penguins from Antarctica." Genome 43, no. 4 (2000): 613–18. http://dx.doi.org/10.1139/g00-018.

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We have determined the nucleotide sequence of the entire mitochondrial control region (CR) of the Adélie penguin (Pygoscelis adeliae) from Antarctica. Like in most other birds, this CR region is flanked by the gene nad6 and transfer (t)RNA trnE(uuc) at the 5' end and the gene rns and trnF(gaa) at the 3' end. Sequence analysis shows that the Adélie penguin CR contains many elements in common with other CRs including the termination associated sequences (TAS), conserved F, E, D, and C boxes, the conserved sequence block (CSB)-1, as well as the putative light and heavy strand promoters sites (LSP

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Imashimizu, Masahiko, Yuji Tokunaga, Ariel Afek, Hiroki Takahashi, Nobuo Shimamoto, and David B. Lukatsky. "Control of Transcription Initiation by Biased Thermal Fluctuations on Repetitive Genomic Sequences." Biomolecules 10, no. 9 (2020): 1299. http://dx.doi.org/10.3390/biom10091299.

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In the process of transcription initiation by RNA polymerase, promoter DNA sequences affect multiple reaction pathways determining the productivity of transcription. However, the question of how the molecular mechanism of transcription initiation depends on the sequence properties of promoter DNA remains poorly understood. Here, combining the statistical mechanical approach with high-throughput sequencing results, we characterize abortive transcription and pausing during transcription initiation by Escherichia coli RNA polymerase at a genome-wide level. Our results suggest that initially trans

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Shon, Sudeok, Alan S. Kwan, and Seungjae Lee. "Shape control of cable structures considering concurrent/sequence control." Structural Engineering and Mechanics 52, no. 5 (2014): 919–35. http://dx.doi.org/10.12989/sem.2014.52.5.919.

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31

He, Xuejun, Feng Lin, Wenkang Huang, Chenxia Li, and Xufeng Jing. "Far-field scattering control of wave based on all-dielectric blazed encoding metagrating." Laser Physics 32, no. 11 (2022): 116204. http://dx.doi.org/10.1088/1555-6611/ac9680.

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Abstract Coding metagrating metasurfaces can realize flexible and effective control of polarization, amplitude, and phase of electromagnetic waves. The coded metagrating builds a bridge between the physical unit structure and the digital coding, and can realize the digital coding calculation processing of the physical device. We propose several all dielectric encoded metagrating sequences, and the detailed analysis of their far-field scattering properties is given. Based on the principle of digital coding addition, we add two coding metagrating sequences to obtain a new coding sequence. This n

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32

Kobayashi, Donald Y., Ralph M. Reedy, JulieAnn Bick, and Peter V. Oudemans. "Characterization of a Chitinase Gene from Stenotrophomonas maltophilia Strain 34S1 and Its Involvement in Biological Control." Applied and Environmental Microbiology 68, no. 3 (2002): 1047–54. http://dx.doi.org/10.1128/aem.68.3.1047-1054.2002.

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ABSTRACT A chitinase gene was cloned on a 2.8-kb DNA fragment from Stenotrophomonas maltophilia strain 34S1 by heterologous expression in Burkholderia cepacia. Sequence analysis of this fragment identified an open reading frame encoding a deduced protein of 700 amino acids. Removal of the signal peptide sequence resulted in a predicted protein that was 68 kDa in size. Analysis of the sequence indicated that the chitinase contained a catalytic domain belonging to family 18 of glycosyl hydrolases. Three putative binding domains, a chitin binding domain, a novel polycystic kidney disease (PKD) do

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33

EGNER, T. "Congruency sequence effects and cognitive control." Cognitive, Affective, & Behavioral Neuroscience 7, no. 4 (2007): 380–90. http://dx.doi.org/10.3758/cabn.7.4.380.

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Chambers, W. G., and J. Dj Golić. "Fast reconstruction of clock-control sequence." Electronics Letters 38, no. 20 (2002): 1174. http://dx.doi.org/10.1049/el:20020799.

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Wilkinson, Leonora, and David R. Shanks. "Intentional Control and Implicit Sequence Learning." Journal of Experimental Psychology: Learning, Memory, and Cognition 30, no. 2 (2004): 354–69. http://dx.doi.org/10.1037/0278-7393.30.2.354.

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Chen, Kanglin, and Dirk A. Lorenz. "Image Sequence Interpolation Using Optimal Control." Journal of Mathematical Imaging and Vision 41, no. 3 (2011): 222–38. http://dx.doi.org/10.1007/s10851-011-0274-2.

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von Brasch, Thomas, Johan Byström, and Lars Petter Lystad. "Optimal Control and the Fibonacci Sequence." Journal of Optimization Theory and Applications 154, no. 3 (2012): 857–78. http://dx.doi.org/10.1007/s10957-012-0061-2.

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38

Ananjev, A. V., V. I. Lyutin, and E. V. Lyutina. "Synchronization system of radio pulse sequence during control of object movement." Telecommunications 2023, no. 12 (2023): 18–27. http://dx.doi.org/10.31044/1684-2588-2023-0-12-18-27.

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Based on recurrent algorithms for filtration of Markov sequences, an algorithm for the operation of a synchronization system of a sequence of quasi-periodic radio pulses that occurs in the receiver of an infrared coordinator of an object guidance’s command system with modulated tracer radiation has been synthesized. The analysis of the synthesized algorithms was carried out, during which the quality influence of synchronization by a sequence of pulses on the accuracy of object guidance into a given region of space was determined.

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Duharcourt, Sandra, Anne-Marie Keller, and Eric Meyer. "Homology-Dependent Maternal Inhibition of Developmental Excision of Internal Eliminated Sequences inParamecium tetraurelia." Molecular and Cellular Biology 18, no. 12 (1998): 7075–85. http://dx.doi.org/10.1128/mcb.18.12.7075.

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ABSTRACT Thousands of single-copy internal eliminated sequences (IESs) are excised from the germ line genome of ciliates during development of the polygenomic somatic macronucleus, following sexual events.Paramecium IESs are short, noncoding elements that frequently interrupt coding sequences. No absolutely conserved sequence element, other than flanking 5′-TA-3′ direct repeats, has been identified among sequenced IESs; the mechanisms of their specific recognition and precise elimination are unknown. Previous work has revealed the existence of an epigenetic control of excision. It was shown th

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Shin, Jacqueline C., and Richard B. Ivry. "Spatial and Temporal Sequence Learning in Patients with Parkinson's Disease or Cerebellar Lesions." Journal of Cognitive Neuroscience 15, no. 8 (2003): 1232–43. http://dx.doi.org/10.1162/089892903322598175.

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The functional role of different subcortical areas in sequence learning is not clear. In the current study, Parkinson's patients, patients with cerebellar damage, and age-matched control participants performed a serial reaction time task in which a spatial sequence and a temporal sequence were presented simultaneously. The responses were based on the spatial sequence, and the temporal sequence was incidental to the task. The two sequences were of the same length, and the phase relationship between them was held constant throughout training. Sequence learning was assessed comparing performance

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R Nash, Allan, Wendy K Glenn, Stephen S Moore, Judith Kerr, Adrienne R Thompson, and EOP Thompson. "Oestrogen Sulfotransferase: Molecular Cloning and Sequencing of cDNA for the Bovine Placental Enzyme." Australian Journal of Biological Sciences 41, no. 4 (1988): 507. http://dx.doi.org/10.1071/bi9880507.

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The female sex hormone, oestrogen, plays a central role in breast cell proliferation in both the normal and malignant state. It controls transcription from several genes, including that for the progesterone receptor, and in endometrial tissue, via this receptor, it controls the gene for the enzyme oestrogen sulfotransferase. This enzyme may control the level of the oestrogen receptor by sulfurylating free oestradiol. To study the mode of transcriptional control exercised by oestrogen, bovine oestrogen sulfotransferase cDNA has been cloned and the nucleotide sequence determined. The message, of

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Petrella, A., I. Doti, V. Agosti, et al. "A 5′ Regulatory Sequence Containing Two Ets Motifs Controls the Expression of the Wiskott-Aldrich Syndrome Protein (WASP) Gene in Human Hematopoietic Cells." Blood 91, no. 12 (1998): 4554–60. http://dx.doi.org/10.1182/blood.v91.12.4554.

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Abstract The recently-identified Wiskott-Aldrich syndrome protein gene (WASP) is responsible for the Wiskott-Aldrich X-linked immunodeficiency as well as for isolated X-linked thrombocytopenia (XLT). To characterize the regulatory sequences of the WASP gene, we have isolated, sequenced and functionally analyzed a 1.6-Kb DNA fragment upstream of the WASP coding sequence. Transfection experiments showed that this fragment is capable of directing efficient expression of the reporter chloramphenicol acetyltransferase (CAT) gene in all human hematopoietic cell lines tested. Progressive 5′ deletions

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Petrella, A., I. Doti, V. Agosti, et al. "A 5′ Regulatory Sequence Containing Two Ets Motifs Controls the Expression of the Wiskott-Aldrich Syndrome Protein (WASP) Gene in Human Hematopoietic Cells." Blood 91, no. 12 (1998): 4554–60. http://dx.doi.org/10.1182/blood.v91.12.4554.412k26_4554_4560.

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The recently-identified Wiskott-Aldrich syndrome protein gene (WASP) is responsible for the Wiskott-Aldrich X-linked immunodeficiency as well as for isolated X-linked thrombocytopenia (XLT). To characterize the regulatory sequences of the WASP gene, we have isolated, sequenced and functionally analyzed a 1.6-Kb DNA fragment upstream of the WASP coding sequence. Transfection experiments showed that this fragment is capable of directing efficient expression of the reporter chloramphenicol acetyltransferase (CAT) gene in all human hematopoietic cell lines tested. Progressive 5′ deletions showed t

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Zhao, G. H., B. Hu, J. K. Song, et al. "Characterization of Oesophagostomum asperum and O. columbianum by internal transcribed spacers of nuclear ribosomal DNA." Journal of Helminthology 88, no. 1 (2012): 74–81. http://dx.doi.org/10.1017/s0022149x12000764.

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AbstractIn the present study, the internal transcribed spacers (ITS) of ribosomal DNA (rDNA) of Oesophagostomum asperum and O. columbianum were amplified and sequenced. The ITS-1, 5.8S and ITS-2 rDNA sequences of O. asperum were 374 bp, 153 bp and 259 bp in length, respectively, and the corresponding sequences of O. columbianum were 259, 153 and 218 bp in length, respectively. Sequence differences in the ITS-1 and ITS-2 rDNA between the two Oesophagostomum species were 9.5–10.2% and 12.7–13.9%, respectively. Sequence differences in the ITS-1 and ITS-2 rDNA among members of the genus Oesophagos

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Dey, Debadeepta, Tian Liu, Boris Sofman, and James Bagnell. "Efficient Optimization of Control Libraries." Proceedings of the AAAI Conference on Artificial Intelligence 26, no. 1 (2021): 1983–89. http://dx.doi.org/10.1609/aaai.v26i1.8383.

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A popular approach to high dimensional control problems in robotics uses a library of candidate “maneuvers” or “trajectories”. The library is either evaluated on a fixed number of candidate choices at runtime (e.g. path set selection for planning) or by iterating through a sequence of feasible choices until success is achieved (e.g. grasp selection). The performance of the library relies heavily on the content and order of the sequence of candidates. We propose a provably efficient method to optimize such libraries, leveraging recent advances in optimizing submodular functions of sequences. Th

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Sulykos, István, Krisztina Kecskés-Kovács, and István Czigler. "Mismatch Negativity Does Not Show Evidence of Memory Reactivation in the Visual Modality." Journal of Psychophysiology 27, no. 1 (2013): 1–6. http://dx.doi.org/10.1027/0269-8803/a000085.

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The possibility of reactivation of the memory representation underlying visual mismatch negativity (vMMN) was investigated in a modified passive roving-standard paradigm. Stimuli (arrays of Gábor patches) were presented in sequences with blank interval between the sequences. The first member of each sequence was identical to the standard of the previous sequence, while the second stimulus had different orientation therefore the second stimulus was considered as deviant. In a control condition the stimuli of the previous sequence had random orientations. Event-related potentials (ERPs) in respo

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Yu, Shu Chun, Xiao Yang Yu, Jian Ying Fan, and Hai Bin Wu. "Aligning Genomic Sequence Applied in Stereo Matching." Applied Mechanics and Materials 121-126 (October 2011): 4357–61. http://dx.doi.org/10.4028/www.scientific.net/amm.121-126.4357.

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The stereo matching algorithm based on aligning genomic sequence is proposed in the paper. This method is divided in three steps: do genomic sequence on the same name epipolar of stereo matching, get branch matrix by establishing genomic sequences using the same name epipolar after being genomic sequences, control points technology and dynamic backdate method to get disparity. The experimental results show that stereo matching method based on genomic sequences has fast speed and good matching quality.

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Cho, Soobum, and Sang Kyu Park. "Optimized Scheduling Technique of Null Subcarriers for Peak Power Control in 3GPP LTE Downlink." Scientific World Journal 2014 (2014): 1–8. http://dx.doi.org/10.1155/2014/279217.

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Orthogonal frequency division multiple access (OFDMA) is a key multiple access technique for the long term evolution (LTE) downlink. However, high peak-to-average power ratio (PAPR) can cause the degradation of power efficiency. The well-known PAPR reduction technique, dummy sequence insertion (DSI), can be a realistic solution because of its structural simplicity. However, the large usage of subcarriers for the dummy sequences may decrease the transmitted data rate in the DSI scheme. In this paper, a novel DSI scheme is applied to the LTE system. Firstly, we obtain the null subcarriers in sin

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Flynn, Loren L., Chalermchai Mitrpant, Abbie Adams, et al. "Targeted SMN Exon Skipping: A Useful Control to Assess In Vitro and In Vivo Splice-Switching Studies." Biomedicines 9, no. 5 (2021): 552. http://dx.doi.org/10.3390/biomedicines9050552.

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The literature surrounding the use of antisense oligonucleotides continues to grow, with new disease and mechanistic applications constantly evolving. Furthermore, the discovery and advancement of novel chemistries continues to improve antisense delivery, stability and effectiveness. For each new application, a rational sequence design is recommended for each oligomer, as is chemistry and delivery optimization. To confirm oligomer delivery and antisense activity, a positive control AO sequence with well characterized target-specific effects is recommended. Here, we describe splice-switching an

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Bahubalendruni, M. V. A. Raju, B. B. V. L. Deepak, and Bibhuti Bhusan Biswal. "An advanced immune based strategy to obtain an optimal feasible assembly sequence." Assembly Automation 36, no. 2 (2016): 127–37. http://dx.doi.org/10.1108/aa-10-2015-086.

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Purpose The purpose of this study is to develop an intelligent methodology to find out an optimal feasible assembly sequence while considering the assembly predicates. Design/methodology/approach This proposed study is carried out by using two artificial immune system-based models, namely, Bone Marrow Model and Negative Selection Algorithms, to achieve the following objectives: to obtain the possible number of assembly sequences; to obtain the feasible assembly sequences while considering different assembly predicates; and to obtain an optimal feasible assembly sequence. Findings Proposed bone

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