Relevant bibliographies by topics / Data storage into DNA molecules

Contents

  1. Journal articles
  2. Dissertations / Theses
  3. Books
  4. Book chapters
  5. Conference papers
  6. Reports

Academic literature on the topic 'Data storage into DNA molecules'

Author: Grafiati
Published: 14 December 2024
Last updated: 27 July 2025

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Journal articles on the topic "Data storage into DNA molecules"

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Jiang, Jiao. "Application of gene editing technology to DNA digital data storage." Highlights in Science, Engineering and Technology 73 (November 29, 2023): 452–58. http://dx.doi.org/10.54097/hset.v73i.14051.

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While the archival digital storage industry is approaching its physical limits, demand is increasing significantly, so alternatives are emerging. The modern world is in dire need of durable, scalable and economical alternative storage media. Deoxyribonucleic acid (DNA), a promising storage medium, offers superior information durability, capacity and energy consumption, making it a promising candidate for long-term data storage. However, the design and realization of DNA digital data storage face many problems, but gene editing technology, as a technology that makes modifications to genes direc
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Garafutdinov, R. R., A. R. Sakhabutdinova, and A. V. Chemeris. "Long-term room temperature storage of DNA molecules." Biomics 12, no. 4 (2020): 552–63. http://dx.doi.org/10.31301/2221-6197.bmcs.2020-49.

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The simplest and most common method of long-term storage of DNA samples at present is the storage of their frozen solutions, which, however, has a number of disadvantages, including the destruction of DNA molecules during freezing and thawing, as well as energy consumption and the likelihood of losing valuable samples in the event of possible accidents. In this regard, long-term storage of DNA samples at room temperature in a dried state is preferable, especially since an even greater increase in the number of stored DNA samples is planned due to the planned preservation of non-biological data
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Zhang, Yun Peng, Feng Ying Tian, Man Hui Sun, Ding Yu, Fei Xiang Fan, and Wei Guo Liu. "Based on DNA OTP Key Generation and Management Research." Applied Mechanics and Materials 427-429 (September 2013): 2470–72. http://dx.doi.org/10.4028/www.scientific.net/amm.427-429.2470.

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With the development of molecular-bio technology, the feature of DNA molecules for ultra-large-scale data storage has created a new approach for data storage. This paper gives a way of strengthening key transport security. Through recombinant DNA technology, use only sender-receiver know restriction enzymes to combine the key DNA and the T vector, to form a recombinant plasmid, making the key DNA bio-hide, and then place the recombinant plasmid in implanted bacteria .
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Ceze, Luis, Jeff Nivala, and Karin Strauss. "Molecular digital data storage using DNA." Nature Reviews Genetics 20, no. 8 (2019): 456–66. http://dx.doi.org/10.1038/s41576-019-0125-3.

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Coudy, Delphine, Marthe Colotte, Aurélie Luis, Sophie Tuffet, and Jacques Bonnet. "Long term conservation of DNA at ambient temperature. Implications for DNA data storage." PLOS ONE 16, no. 11 (2021): e0259868. http://dx.doi.org/10.1371/journal.pone.0259868.

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DNA conservation is central to many applications. This leads to an ever-increasing number of samples which are more and more difficult and costly to store or transport. A way to alleviate this problem is to develop procedures for storing samples at room temperature while maintaining their stability. A variety of commercial systems have been proposed but they fail to completely protect DNA from deleterious factors, mainly water. On the other side, Imagene company has developed a procedure for long-term conservation of biospecimen at room temperature based on the confinement of the samples under
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Carmean, Douglas, Luis Ceze, Georg Seelig, Kendall Stewart, Karin Strauss, and Max Willsey. "DNA Data Storage and Hybrid Molecular–Electronic Computing." Proceedings of the IEEE 107, no. 1 (2019): 63–72. http://dx.doi.org/10.1109/jproc.2018.2875386.

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Solanki, Arnav, Zak Griffin, Purab Ranjan Sutradhar, et al. "Neural network execution using nicked DNA and microfluidics." PLOS ONE 18, no. 10 (2023): e0292228. http://dx.doi.org/10.1371/journal.pone.0292228.

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DNA has been discussed as a potential medium for data storage. Potentially it could be denser, could consume less energy, and could be more durable than conventional storage media such as hard drives, solid-state storage, and optical media. However, performing computations on the data stored in DNA is a largely unexplored challenge. This paper proposes an integrated circuit (IC) based on microfluidics that can perform complex operations such as artificial neural network (ANN) computation on data stored in DNA. We envision such a system to be suitable for highly dense, throughput-demanding bio-
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Xu, Chengtao, Chao Zhao, Biao Ma, and Hong Liu. "Uncertainties in synthetic DNA-based data storage." Nucleic Acids Research 49, no. 10 (2021): 5451–69. http://dx.doi.org/10.1093/nar/gkab230.

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Abstract Deoxyribonucleic acid (DNA) has evolved to be a naturally selected, robust biomacromolecule for gene information storage, and biological evolution and various diseases can find their origin in uncertainties in DNA-related processes (e.g. replication and expression). Recently, synthetic DNA has emerged as a compelling molecular media for digital data storage, and it is superior to the conventional electronic memory devices in theoretical retention time, power consumption, storage density, and so forth. However, uncertainties in the in vitro DNA synthesis and sequencing, along with its
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Bhattarai-Kline, Santi, Sierra K. Lear, and Seth L. Shipman. "One-step data storage in cellular DNA." Nature Chemical Biology 17, no. 3 (2021): 232–33. http://dx.doi.org/10.1038/s41589-021-00737-2.

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Zhang, Cheng, Ranfeng Wu, Fajia Sun, et al. "Parallel molecular data storage by printing epigenetic bits on DNA." Nature 634, no. 8035 (2024): 824–32. http://dx.doi.org/10.1038/s41586-024-08040-5.

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Dissertations / Theses on the topic "Data storage into DNA molecules"

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Berton, Chloé. "Sécurité des données stockées sur molécules d’ADN." Electronic Thesis or Diss., Ecole nationale supérieure Mines-Télécom Atlantique Bretagne Pays de la Loire, 2024. http://www.theses.fr/2024IMTA0431.

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La quantité de données numériques produites dans le monde chaque année augmente exponentiellement et les supports actuels de stockage atteignent leurs limites. Dans ce contexte, le stockage de données sur molécules d'ADN est très prometteur. Stockant jusqu’à 10¹⁸ octets par gramme d'ADN pour une consommation d'énergie quasi nulle, il a une durée de vie 100 fois plus longue que les disques durs. Cette technologie de stockage étant en développement, il est opportun d’y intégrer nativement des mécanismes pour sécuriser les données. C’est l’objet de cette thèse. Notre première contribution est une
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Piretti, Mattia. "Synthetic DNA as a novel data storage solution for digital images." Master's thesis, Alma Mater Studiorum - Università di Bologna, 2020. http://amslaurea.unibo.it/22028/.

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During the digital revolution there has been an explosion in the amount of data produced by humanity and the capacity of conventional storage devices has been struggling to keep up with this aggressive growth. This has highlighted the need for new means to store digital information, especially cold data. In this dissertations we will build upon the work done by the I3S MediaCoding team on utilizing DNA as a novel storage medium,thanks to its incredibly high information density and effectively infinite shelf life. We will expand on their previous works and adapt them to operate on the Nanopore
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Germishuizen, Willem Andreas. "Dielectrophoresis as an addressing mechanism in a novel data storage system based on DNA." Thesis, University of Cambridge, 2004. http://ethos.bl.uk/OrderDetails.do?uin=uk.bl.ethos.615680.

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Yanez, Ciceron. "SYNTHESIS OF NOVEL FLUORENE-BASED TWO-PHOTON ABSORBING MOLECULES AND THEIR APPLICATIONS IN OPTICAL DATA STORAGE, MICROFABRICATIO." Doctoral diss., University of Central Florida, 2009. http://digital.library.ucf.edu/cdm/ref/collection/ETD/id/3573.

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Two-photon absorption (2PA) has been used for a number of scientific and technological applications, exploiting the fact that the 2PA probability is directly proportional to the square of the incident light intensity (while one-photon absorption bears a linear relation to the incident light intensity). This intrinsic property of 2PA leads to 3D spatial localization, important in fields such as optical data storage, fluorescence microscopy, and 3D microfabrication. The spatial confinement that 2PA enables has been used to induce photochemical and photophysical events in increasingly smaller vol
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Camerlengo, Terry Luke. "Techniques for Storing and Processing Next-Generation DNA Sequencing Data." The Ohio State University, 2014. http://rave.ohiolink.edu/etdc/view?acc_num=osu1388502159.

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Yanez, Ciceron. "Synthesis of novel fluorene-based two-photon absorbing molecules and their applications in optical data storage, microfabrication, and stimulated emission depletion." Orlando, Fla. : University of Central Florida, 2009. http://purl.fcla.edu/fcla/etd/CFE0002913.

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Halladjian, Sarkis. "Spatially Integrated Abstraction of Genetic Molecules." Electronic Thesis or Diss., université Paris-Saclay, 2020. http://www.theses.fr/2020UPASG056.

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Le génome humain est principalement constitué d'ADN, une macromolécule constituée d'une longue séquence linéaire de bases, étroitement serrée pour s'insérer dans le noyau relativement petit. L'empaquetage donne lieu à de multiples niveaux hiérarchiques d'organisation. Des recherches récentes ont montré que, parallèlement à la séquence linéaire, l'agencement spatial du génome joue un rôle important dans la fonction et l'activité du génome. La visualisation des aspects li-né-aires et spatiaux des données du génome est donc nécessaire. Dans cette thèse, nous nous concentrons sur le concept d'abst
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Favero, Francesco. "Development of two new approaches for NGS data analysis of DNA and RNA molecules and their application in clinical and research fields." Doctoral thesis, Università del Piemonte Orientale, 2019. http://hdl.handle.net/11579/102446.

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The aim of this study is focused on two main areas of NGS analysis data: RNA-seq(with a specific interest in meta-transcriptomics) and DNA somatic mutations detection. We developed a simple and efficient pipeline for the analysis of NGS data derived from gene panels to identify DNA somatic point mutations. In particular we optimized a somatic variant calling procedure that was tested on simulated datasets and on real data. The performance of our system has been compared with currently available tools for variant calling reviewed in literature. For RNA-seq analysis, in this work we tested and o
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Boukis, Andreas Christos [Verfasser], and M. A. R. [Akademischer Betreuer] Meier. "Moleküle als potentielle Datenspeichersysteme: Multikomponentenreaktionen sind der Schlüssel = Molecules as potential data storage systems: Multicomponent reactions are the key / Andreas Christos Boukis ; Betreuer: M. A. R. Meier." Karlsruhe : KIT-Bibliothek, 2018. http://d-nb.info/1164081071/34.

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Pearson, Anthony Craig. "Nanoscale Surface Patterning and Applications: Using Top-Down Patterning Methods to Aid Bottom-Up Fabrication." BYU ScholarsArchive, 2012. https://scholarsarchive.byu.edu/etd/3757.

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Bottom-up self-assembly can be used to create structures with sub-20 nm feature sizes or materials with advanced electrical properties. Here I demonstrate processes to enable such self-assembling systems including block copolymers and DNA origami, to be integrated into nanoelectronic devices. Additionally, I present a method which utilizes the high stability and electrical conductivity of graphene, which is a material formed using a bottom-up growth process, to create archival data storage devices. Specifically, I show a technique using block copolymer micelle lithography to fabricate arrays o
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Books on the topic "Data storage into DNA molecules"

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I, Bell George, and Marr Thomas G, eds. Computers and DNA: The proceedings of the Interface Between Computation Science and Nucleic Acid Sequencing Workshop, held Dec. 12 to 16, 1988 in Santa Fe, New Mexico. Addison-Wesley, 1990.

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Venter, J. Craig, Chris Fields, and Mark D. Adams. Automated DNA Sequencing and Analysis. Elsevier Science & Technology Books, 2012.

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(Editor), Mark D. Adams, Chris Fields (Editor), and J. Craig Venter (Editor), eds. Automated DNA Sequencing and Analysis. Academic Press, 1994.

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Shomorony, Ilan, and Reinhard Heckel. Information-Theoretic Foundations of DNA Data Storage. Now Publishers, 2022.

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Demidov, Vadim V. DNA Beyond Genes: From Data Storage and Computing to Nanobots, Nanomedicine, and Nanoelectronics. Springer, 2020.

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Demidov, Vadim V. DNA Beyond Genes: From Data Storage and Computing to Nanobots, Nanomedicine, and Nanoelectronics. Springer International Publishing AG, 2021.

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Data in Modern Biology (Codata Bulletin,). Elsevier Science Pub Co, 1985.

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Hilgurt, S. Ya, and O. A. Chemerys. Reconfigurable signature-based information security tools of computer systems. PH “Akademperiodyka”, 2022. http://dx.doi.org/10.15407/akademperiodyka.458.297.

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The book is devoted to the research and development of methods for combining computational structures for reconfigurable signature-based information protection tools for computer systems and networks in order to increase their efficiency. Network security tools based, among others, on such AI-based approaches as deep neural networking, despite the great progress shown in recent years, still suffer from nonzero recognition error probability. Even a low probability of such an error in a critical infrastructure can be disastrous. Therefore, signature-based recognition methods with their theoretic
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Book chapters on the topic "Data storage into DNA molecules"

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Chen, Yuan-Jyue, and Georg Seelig. "Scaling Up DNA Computing with Array-Based Synthesis and High-Throughput Sequencing." In Natural Computing Series. Springer Nature Singapore, 2023. http://dx.doi.org/10.1007/978-981-19-9891-1_16.

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AbstractIt was 40 years ago today, when Ned taught DNA to play [32]. When Ned Seeman began laying the theoretical foundations of what is now DNA nanotechnology, he likely did not imagine the entire diversity and scale of molecular structures, machines, and computing devices that would be enabled by his work. While there are many reasons for the success of the field, not least the creativity shown by Ned and the community he helped build, such progress would not have been possible without breakthroughs in DNA synthesis and molecular analysis technology. Here, we argue that the technologies that
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Singh, Baljinder. "DNA Digital Data Storage: Breakthroughs in Biomedical Research." In Biomedical Translational Research. Springer Nature Singapore, 2022. http://dx.doi.org/10.1007/978-981-16-4345-3_9.

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Jenifer, P., and T. Kirthiga Devi. "Enhancing Data Security Using DNA Algorithm in Cloud Storage." In Artificial Intelligence Techniques for Advanced Computing Applications. Springer Singapore, 2020. http://dx.doi.org/10.1007/978-981-15-5329-5_3.

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Kim, Raphael. "DNA as Digital Data Storage: Opportunities and Challenges for HCI." In Communications in Computer and Information Science. Springer International Publishing, 2020. http://dx.doi.org/10.1007/978-3-030-60700-5_29.

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Siddaramappa, V., and K. B. Ramesh. "DNA-Based XOR Operation (DNAX) for Data Security Using DNA as a Storage Medium." In Integrated Intelligent Computing, Communication and Security. Springer Singapore, 2018. http://dx.doi.org/10.1007/978-981-10-8797-4_36.

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Kruglik, S. G., C. Otto, A. G. Shvedko, et al. "New Raman Data on Photoinduced Porphyrin Translocation and Exciplex Formation in Cu(TMpy-P4) — DNA Complex." In Spectroscopy of Biological Molecules: Modern Trends. Springer Netherlands, 1997. http://dx.doi.org/10.1007/978-94-011-5622-6_177.

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Yatribi, Anouar, Mostafa Belkasmi, and Fouad Ayoub. "An Efficient and Secure Forward Error Correcting Scheme for DNA Data Storage." In Proceedings of the Tenth International Conference on Soft Computing and Pattern Recognition (SoCPaR 2018). Springer International Publishing, 2019. http://dx.doi.org/10.1007/978-3-030-17065-3_23.

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Satz, Alexander L., and Weiren Cui. "Analysis of DNA-Encoded Library Screening Data: Selection of Molecules for Synthesis." In Methods in Molecular Biology. Springer US, 2022. http://dx.doi.org/10.1007/978-1-0716-2545-3_23.

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Rasool, Abdur, Qiang Qu, Qingshan Jiang, and Yang Wang. "A Strategy-based Optimization Algorithm to Design Codes for DNA Data Storage System." In Algorithms and Architectures for Parallel Processing. Springer International Publishing, 2022. http://dx.doi.org/10.1007/978-3-030-95388-1_19.

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Tabassum, Tamanna, and Fatema Akter. "MDPROM: Multiple-Valued Data Storage Using Programmable Read Only Memory in DNA Computing." In Lecture Notes in Networks and Systems. Springer Nature Singapore, 2025. https://doi.org/10.1007/978-981-96-2721-9_44.

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Conference papers on the topic "Data storage into DNA molecules"

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Demeter, Marc, Shawna Johnston, Kim Dockens, and Raymond J. Turner. "Molecular MIC Diagnoses from ATP Field Test: Streamlined Workflow from Field to 16S rRNA Gene Metagenomics Results." In CORROSION 2017. NACE International, 2017. https://doi.org/10.5006/c2017-09420.

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Abstract Microbiologically influenced corrosion (MIC) describes the negative impacts of microbial growth within various industries. While culture based growth tests are the traditional means of assessing MIC, they are not accurate. New culture-independent assays have been developed; one of which is the adenosine triphosphate (ATP) assay. This field assay allows for indirect enumeration of microorganisms; however, it does not divulge which microorganisms are present. Molecular methods such as 16S metagenomics (16S rRNA gene sequencing and data interpretation) are often used for characterizing t
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Ghosh, Nishant, N. Anushka Reddy, VNS Sasank, K. Suvarchala, and Sushma Patkar. "Preserving History with Synthetic DNA: An Innovative Data Storage Solution." In 2024 IEEE International Conference on Electronics, Computing and Communication Technologies (CONECCT). IEEE, 2024. http://dx.doi.org/10.1109/conecct62155.2024.10677101.

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Srivastava, Shubham, Krishna Gopal Benerjee, and Adrish Banerjee. "Efficient Bidirectional RNNs for Substitution Error Correction in DNA Data Storage." In 2024 IEEE International Conference on Machine Learning for Communication and Networking (ICMLCN). IEEE, 2024. http://dx.doi.org/10.1109/icmlcn59089.2024.10625179.

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En-Nattouh, Youssef, and Reda Jourani. "Improved storage of Big Data in DNA using the PCA algorithm." In 2024 International Conference on Circuit, Systems and Communication (ICCSC). IEEE, 2024. http://dx.doi.org/10.1109/iccsc62074.2024.10616520.

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Pic, Xavier, and Raja Appuswamy. "Combining Progressive Image Compression and Random Access in DNA Data Storage." In 2025 25th International Conference on Digital Signal Processing (DSP). IEEE, 2025. https://doi.org/10.1109/dsp65409.2025.11075047.

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Yuvarani, R., and R. Mahaveerakannan. "Enhanced Cloud Security Through DNA-based Authentication for Data Storage and Transactions." In 2024 5th International Conference on Electronics and Sustainable Communication Systems (ICESC). IEEE, 2024. http://dx.doi.org/10.1109/icesc60852.2024.10689928.

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Imtiaz, Romil, Zi-Chen Fan, Shu-Min Liu, and Susanto Rahardja. "A Novel DNA-based Data Storage Simulation Platform with the JPEG Standards." In 2025 International Conference on Electrical Engineering and Information Systems (CEEIS). IEEE, 2025. https://doi.org/10.1109/ceeis65979.2025.00014.

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Palunčić, Filip, Daniella Palunčić, and B. T. Maharaj. "Capacity of Runlength-Limited and GC-Content Constrained Codes for DNA Data Storage." In 2024 IEEE International Symposium on Information Theory (ISIT). IEEE, 2024. http://dx.doi.org/10.1109/isit57864.2024.10619166.

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Bhangale, Prajakta, and Shubhangi Vaikole. "Navigating the Intersections of Quantum Computing, DNA-Based Data Storage, and Geospatial Data Security: An Overview." In 2024 8th International Conference on Computing, Communication, Control and Automation (ICCUBEA). IEEE, 2024. https://doi.org/10.1109/iccubea61740.2024.10774668.

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Shi, Wei, Paul Evans, Gabrielle Scheffer, and Casey Hubert. "Novel Application of Nitrate as H2S Control Strategy in Permian Basin Produced Water Storage Ponds." In CONFERENCE 2023. AMPP, 2023. https://doi.org/10.5006/c2023-18968.

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Abstract Produced water (PW) ponds are important facilities for supporting hydraulic fracturing in the Permian Basin. The control of H2S in these facilities is critical to safe and reliable frac and production operations. Effective microbial control strategies are required to mitigate sulfate-reducing bacteria (SRB) activity and fouling of production facilities with iron sulfide. Next generation sequencing (NGS) DNA analyses of Delaware Basin produced water (PW) samples highlighted a bacterial consortium dominated by putative halophilic fermentative and sulfate-reducing bacteria such as Halana
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Reports on the topic "Data storage into DNA molecules"

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Iudicone, Daniele, and Marina Montresor. Omics community protocols. EuroSea, 2023. http://dx.doi.org/10.3289/eurosea_d3.19.

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The aim of the WP3 “Network Integration and Improvements” is to coordinate and enhance key aspects of integration of European observing technology (and related data flows) for its use in the context of international ocean monitoring activities. One of the dimensions of the integrations is the constitution of thematic networks, that is, networks whose aim is to address specific observational challenges and thus to favor innovation, innovation that will ultimately support the Blue economy. In this context, the specific aim of Task 3.8 is to accelerate the adoption of molecular methods such as ge
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Heifetz, Yael, and Michael Bender. Success and failure in insect fertilization and reproduction - the role of the female accessory glands. United States Department of Agriculture, 2006. http://dx.doi.org/10.32747/2006.7695586.bard.

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The research problem. Understanding of insect reproduction has been critical to the design of insect pest control strategies including disruptions of mate-finding, courtship and sperm transfer by male insects. It is well known that males transfer proteins to females during mating that profoundly affect female reproductive physiology, but little is known about the molecular basis of female mating response and no attempts have yet been made to interfere with female post-mating responses that directly bear on the efficacy of fertilization. The female reproductive tract provides a crucial environm
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Ron, Eliora, and Eugene Eugene Nester. Global functional genomics of plant cell transformation by agrobacterium. United States Department of Agriculture, 2009. http://dx.doi.org/10.32747/2009.7695860.bard.

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The aim of this study was to carry out a global functional genomics analysis of plant cell transformation by Agrobacterium in order to define and characterize the physiology of Agrobacterium in the acidic environment of a wounded plant. We planed to study the proteome and transcriptome of Agrobacterium in response to a change in pH, from 7.2 to 5.5 and identify genes and circuits directly involved in this change. Bacteria-plant interactions involve a large number of global regulatory systems, which are essential for protection against new stressful conditions. The interaction of bacteria with
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Rodriguez Muxica, Natalia. Open configuration options Bioinformatics for Researchers in Life Sciences: Tools and Learning Resources. Inter-American Development Bank, 2022. http://dx.doi.org/10.18235/0003982.

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The COVID-19 pandemic has shown that bioinformatics--a multidisciplinary field that combines biological knowledge with computer programming concerned with the acquisition, storage, analysis, and dissemination of biological data--has a fundamental role in scientific research strategies in all disciplines involved in fighting the virus and its variants. It aids in sequencing and annotating genomes and their observed mutations; analyzing gene and protein expression; simulation and modeling of DNA, RNA, proteins and biomolecular interactions; and mining of biological literature, among many other c
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Epel, Bernard, and Roger Beachy. Mechanisms of intra- and intercellular targeting and movement of tobacco mosaic virus. United States Department of Agriculture, 2005. http://dx.doi.org/10.32747/2005.7695874.bard.

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To cause disease, plant viruses must replicate and spread locally and systemically within the host. Cell-to-cell virus spread is mediated by virus-encoded movement proteins (MPs), which modify the structure and function of plasmodesmata (Pd), trans-wall co-axial membranous tunnels that interconnect the cytoplasm of neighboring cells. Tobacco mosaic virus (TMV) employ a single MP for cell- cell spread and for which CP is not required. The PIs, Beachy (USA) and Epel (Israel) and co-workers, developed new tools and approaches for study of the mechanism of spread of TMV that lead to a partial iden
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Lichter, Amnon, Gopi K. Podila, and Maria R. Davis. Identification of Genetic Determinants that Facilitate Development of B. cinerea at Low Temperature and its Postharvest Pathogenicity. United States Department of Agriculture, 2011. http://dx.doi.org/10.32747/2011.7592641.bard.

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Botrytis cinerea is the postharvest pathogen of many agricultural produce with table grapes, strawberries and tomatoes as major targets. The high efficiency with which B. cinerea causes disease on these produce during storage is attributed in part due to its exceptional ability to develop at very low temperature. Our major goal was to understand the genetic determinants which enable it to develop at low temperature. The specific research objectives were: 1. Identify expression pattern of genes in a coldenriched cDNA library. 2. Identify B. cinerea orthologs of cold-induced genes 3. Profile pro
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