Relevant bibliographies by topics / De novo biosynthesis

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Academic literature on the topic 'De novo biosynthesis'

Author: Grafiati
Published: 4 June 2021
Last updated: 6 February 2022

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Journal articles on the topic "De novo biosynthesis"

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Rooney, S. A. "Fatty acid biosynthesis in developing fetal lung." American Journal of Physiology-Lung Cellular and Molecular Physiology 257, no. 4 (1989): L195—L201. http://dx.doi.org/10.1152/ajplung.1989.257.4.l195.

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Fatty acids are integral components of glycerolipids and hence of the phosphatidylcholine-rich pulmonary surfactant. There is ample evidence that the lung is able to synthesize fatty acids de novo. Toward the end of gestation as the fetus prepares for life outside the uterus, there is a surge in phosphatidylcholine synthesis. At the same time there is an increase in de novo fatty acid biosynthesis as well as in the activity of fatty acid synthase, the enzyme that catalyzes the final steps in fatty acid synthesis. Glucocorticoids have long been known to accelerate phosphatidylcholine biosynthes
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Dircks, Lori, and Hei Sook Sul. "Acyltransferases of de novo glycerophospholipid biosynthesis." Progress in Lipid Research 38, no. 5-6 (1999): 461–79. http://dx.doi.org/10.1016/s0163-7827(99)00012-0.

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Brückner, Adrian, Martin Kaltenpoth, and Michael Heethoff. "De novo biosynthesis of simple aromatic compounds by an arthropod ( Archegozetes longisetosus )." Proceedings of the Royal Society B: Biological Sciences 287, no. 1934 (2020): 20201429. http://dx.doi.org/10.1098/rspb.2020.1429.

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The ability to synthesize simple aromatic compounds is well known from bacteria, fungi and plants, which all share an exclusive biosynthetic route—the shikimic acid pathway. Some of these organisms further evolved the polyketide pathway to form core benzenoids via a head-to-tail condensation of polyketide precursors. Arthropods supposedly lack the ability to synthesize aromatics and instead rely on aromatic amino acids acquired from food, or from symbiotic microorganisms. The few studies purportedly showing de novo biosynthesis via the polyketide synthase (PKS) pathway failed to exclude endosy
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Wheeler, Paul R. "Pyrimidine biosynthesis de novo in M. leprae." FEMS Microbiology Letters 57, no. 2 (1989): 185–89. http://dx.doi.org/10.1111/j.1574-6968.1989.tb03296.x.

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Liu, D. S., and C. A. Caperelli. "Carbocyclic substrates for de novo purine biosynthesis." Journal of Biological Chemistry 266, no. 25 (1991): 16699–702. http://dx.doi.org/10.1016/s0021-9258(18)55357-6.

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Palmer, Ashley M., Elena Kamynina, Martha S. Field, and Patrick J. Stover. "Folate rescues vitamin B12 depletion-induced inhibition of nuclear thymidylate biosynthesis and genome instability." Proceedings of the National Academy of Sciences 114, no. 20 (2017): E4095—E4102. http://dx.doi.org/10.1073/pnas.1619582114.

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Clinical vitamin B12 deficiency can result in megaloblastic anemia, which results from the inhibition of DNA synthesis by trapping folate cofactors in the form of 5-methyltetrahydrofolate (5-methylTHF) and subsequent inhibition of de novo thymidylate (dTMP) biosynthesis. In the cytosol, vitamin B12 functions in the remethylation of homocysteine to methionine, which regenerates THF from 5-methylTHF. In the nucleus, THF is required for de novo dTMP biosynthesis, but it is not understood how 5-methylTHF accumulation in the cytosol impairs nuclear dTMP biosynthesis. The impact of vitamin B12 deple
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Rehm, Bernd H. A., Timothy A. Mitsky, and Alexander Steinb�chel. "Role of Fatty Acid De Novo Biosynthesis in Polyhydroxyalkanoic Acid (PHA) and Rhamnolipid Synthesis by Pseudomonads: Establishment of the Transacylase (PhaG)-Mediated Pathway for PHA Biosynthesis inEscherichia coli." Applied and Environmental Microbiology 67, no. 7 (2001): 3102–9. http://dx.doi.org/10.1128/aem.67.7.3102-3109.2001.

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ABSTRACT Since Pseudomonas aeruginosa is capable of biosynthesis of polyhydroxyalkanoic acid (PHA) and rhamnolipids, which contain lipid moieties that are derived from fatty acid biosynthesis, we investigated various fab mutants from P. aeruginosa with respect to biosynthesis of PHAs and rhamnolipids. All isogenicfabA, fabB, fabI, rhlG, and phaG mutants fromP. aeruginosa showed decreased PHA accumulation and rhamnolipid production. In the phaG (encoding transacylase) mutant rhamnolipid production was only slightly decreased. Expression of phaG from Pseudomonas putida and expression of the β-ke
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Qazzaz, Hassan M. A. M., (Tim) Zhimin Cao, Duane D. Bolanowski, Barbara J. Clark, and Roland Valdes. "De Novo Biosynthesis and Radiolabeling of Mammalian Digitalis-Like Factors." Clinical Chemistry 50, no. 3 (2004): 612–20. http://dx.doi.org/10.1373/clinchem.2003.022715.

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Abstract Background: Digoxin-like immunoreactive factors (DLIFs) are endogenous mammalian cardenolides with structural features similar to those of the plant-derived digitalis compounds. DLIFs and their structurally related forms (Dh-DLIFs) may serve as effectors of ion-transport activity mediated by their interaction with Na,K-ATPase and thus play a role as a new hormonal axis. Although some evidence implicates the adrenal gland as a tissue source for the DLIFs, little is known about the biosynthetic pathway producing these compounds. We now demonstrate de novo biosynthesis of DLIF by incorpo
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Fitzpatrick, Teresa B., Nikolaus Amrhein, Barbara Kappes, Peter Macheroux, Ivo Tews, and Thomas Raschle. "Two independent routes of de novo vitamin B6 biosynthesis: not that different after all." Biochemical Journal 407, no. 1 (2007): 1–13. http://dx.doi.org/10.1042/bj20070765.

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Vitamin B6 is well known in its biochemically active form as pyridoxal 5′-phosphate, an essential cofactor of numerous metabolic enzymes. The vitamin is also implicated in numerous human body functions ranging from modulation of hormone function to its recent discovery as a potent antioxidant. Its de novo biosynthesis occurs only in bacteria, fungi and plants, making it an essential nutrient in the human diet. Despite its paramount importance, its biosynthesis was predominantly investigated in Escherichia coli, where it is synthesized from the condensation of deoxyxylulose 5-phosphate and 4-ph
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Sánchez-Castillo, Anaís, Marc Vooijs, and Kim R. Kampen. "Linking Serine/Glycine Metabolism to Radiotherapy Resistance." Cancers 13, no. 6 (2021): 1191. http://dx.doi.org/10.3390/cancers13061191.

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The activation of de novo serine/glycine biosynthesis in a subset of tumors has been described as a major contributor to tumor pathogenesis, poor outcome, and treatment resistance. Amplifications and mutations of de novo serine/glycine biosynthesis enzymes can trigger pathway activation; however, a large group of cancers displays serine/glycine pathway overexpression induced by oncogenic drivers and unknown regulatory mechanisms. A better understanding of the regulatory network of de novo serine/glycine biosynthesis activation in cancer might be essential to unveil opportunities to target tumo
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Dissertations / Theses on the topic "De novo biosynthesis"

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Bedingfield, Paul Thomas Peter. "Inhibition of malaria de novo pyrimidine biosynthesis for drug development." Thesis, University of Leeds, 2011. http://ethos.bl.uk/OrderDetails.do?uin=uk.bl.ethos.550336.

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In the absence of an effective vaccine there is ~ a considerable burden on drugs to provide protection from and treat the devastating disease, malaria. However, resistance has been seen to the majority of current antimalarials, making the continued development of new chemotherapeutics imperative. In this thesis dihydroorotate dehydrogenase (DHODH) is further examined as a potential drug target for the treatment of Plasmodium falciparum and Plasmodium vivax infection. DHODH is a key enzyme in de novo pyrimidine biosynthesis, the only pathway available to the parasites to generate vital pyrimidi
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Rodriguez, Rodriguez Mauricio. "Pyrimidine nucleotide de novo biosynthesis as a model of metabolic control." Texas A&M University, 2005. http://hdl.handle.net/1969.1/4425.

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This manuscript presents a thorough investigation and description of metabolic control dynamics in vivo and in silico using as a model de novo pyrimidine biosynthesis. Metabolic networks have been studied intensely for decades, helping develop a detailed understanding of the way cells carry out their biosynthetic and catabolic functions. Biochemical reactions have been defined, pathway structures have been proposed, networks of genetic control have been examined, and mechanisms of enzymatic activity and regulation have been elucidated. In parallel with these types of traditional biochemical an
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Bosveld, Floris. "Physiological implications of impaired de novo coenzyme A biosynthesis in Drosophila melanogaster." [S.l. : Groningen : s.n. ; University Library of Groningen] [Host], 2008. http://irs.ub.rug.nl/ppn/306087308.

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Nili, Nafisseh. "Limitations to amino acid biosynthesis de novo in ruminal strains of Prevotella and Butyrivibrio." Title page, contents and abstract only, 1996. http://web4.library.adelaide.edu.au/theses/09PH/09phn712.pdf.

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Bibliography: leaves 226-261. Investigates nitrogen utilization in some species of rumen bacteria with the object of understanding the role of ammonia versus exogenous amino acids in relation to microbial growth.
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Hermansen, Russell A., Brian K. Mannakee, Wolfgang Knecht, David A. Liberles, and Ryan N. Gutenkunst. "Characterizing selective pressures on the pathway for de novo biosynthesis of pyrimidines in yeast." BioMed Central Ltd, 2015. http://hdl.handle.net/10150/610280.

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BACKGROUND: Selection on proteins is typically measured with the assumption that each protein acts independently. However, selection more likely acts at higher levels of biological organization, requiring an integrative view of protein function. Here, we built a kinetic model for de novo pyrimidine biosynthesis in the yeast Saccharomyces cerevisiae to relate pathway function to selective pressures on individual protein-encoding genes. RESULTS: Gene families across yeast were constructed for each member of the pathway and the ratio of nonsynonymous to synonymous nucleotide substitution rates (d
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Frame, Andrew Scott. "The synthesis of some imidazole nucleosides as potential inhibitors of de novo purine nucleotide biosynthesis." Thesis, University of Lincoln, 1993. http://ethos.bl.uk/OrderDetails.do?uin=uk.bl.ethos.386384.

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Mitsuhashi, Satomi. "A congenital muscular dystrophy with mitochondrial structural abnormalities caused by defective de novo phosphatidylcholine biosynthesis." Kyoto University, 2012. http://hdl.handle.net/2433/152505.

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Sims, Kacee Hall. "Participation of de novo sphingolipid biosynthesis in the regulation of autophagy in response to diverse agents." Diss., Georgia Institute of Technology, 2011. http://hdl.handle.net/1853/42839.

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Sphingolipids are a complex family of molecules that participate in many aspects of cell structure and function, including an essential cellular process known as autophagy. Autophagy is a degradation and recycling pathway whereby intracellular components are sequestered into double-membrane vesicles, known as autophagosomes, for subsequent fusion with lysosomes and degradation. Autophagy takes part in cell survival, host immune defense against pathogens, and other biological processes, but is also sometimes lethal. Ceramide, sphingosine 1-phosphate, and more recently dihydroceramide have been
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Wilson, Hilary Averil. "The chemistry of some 5-aminoimidazoles related to intermediates in the de novo biosynthesis of purines and thiamine." Thesis, University of Lincoln, 1990. http://ethos.bl.uk/OrderDetails.do?uin=uk.bl.ethos.254784.

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Ghosh, Paritosh. "De Novo Glycogen Biosynthesis by a Glycogen Primer Complex in the Obliquely Striated Skeletal Muscle of Ascaris suum." Thesis, North Texas State University, 1987. https://digital.library.unt.edu/ark:/67531/metadc935639/.

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During the purification of the enzyme glycogen synthase from the muscle of the nematode Ascaris suum, approximately 70% of the glycogen synthase activity can be separated from the bulk of cellular glycogen by centrifugation for 60 min at 105,000 x . The glycogen synthase in the supernatant fraction has an Mr of 1.2 x 106 as determined by Sepharose 4B gel filtration chromatography. The glycogen synthase in this high molecular weight complex (glycogen primer complex) can be further purified by ConA-Sepharose affinity chromatography; the enzyme activity was eluted with 100 .mM a-methylmannoside.
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Books on the topic "De novo biosynthesis"

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Chen, Tian-Ling. Biochemical modulation of 5-fluorouracil with or without leucovorin by low doses of de novo pyrimidine biosynthesis inhibitors in MGH-U1 cells. National Library of Canada = Bibliothèque nationale du Canada, 1992.

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Book chapters on the topic "De novo biosynthesis"

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Frentzen, Margrit, M. Neuburger, and R. Douce. "De Novo Biosynthesis of Glycerolipids in Plant Mitochondria." In Biological Role of Plant Lipids. Springer US, 1989. http://dx.doi.org/10.1007/978-1-4684-1303-8_4.

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Bein, Kiflai, and David R. Evans. "de novo Pyrimidine Nucleotide Biosynthesis in Synchronized Chinese Hamster Ovary Cells." In Purine and Pyrimidine Metabolism in Man VIII. Springer US, 1995. http://dx.doi.org/10.1007/978-1-4615-2584-4_115.

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Gladyshev, Vadim N., Bradley A. Carlson, and Dolph L. Hatfield. "Pathways in De Novo Biosynthesis of Selenocysteine and Cysteine in Eukaryotes." In Selenium. Springer International Publishing, 2016. http://dx.doi.org/10.1007/978-3-319-41283-2_4.

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Porter, Lawrence, Jun Yang, and John Rawls. "Expression of de novo Pyrimidine Biosynthesis Genes during Spermatogenesis in Drosophila melanogaster." In Purine and Pyrimidine Metabolism in Man VIII. Springer US, 1995. http://dx.doi.org/10.1007/978-1-4615-2584-4_119.

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del Caño-Ochoa, Francisco, María Moreno-Morcillo, and Santiago Ramón-Maiques. "CAD, A Multienzymatic Protein at the Head of de Novo Pyrimidine Biosynthesis." In Subcellular Biochemistry. Springer International Publishing, 2019. http://dx.doi.org/10.1007/978-3-030-28151-9_17.

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Weier, D., and M. Frentzen. "De Novo Biosynthesis of Eukaryotic Glycerolipids in Chloroplasts of Transgenic Tobacco Plants." In Physiology, Biochemistry and Molecular Biology of Plant Lipids. Springer Netherlands, 1997. http://dx.doi.org/10.1007/978-94-017-2662-7_38.

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Smith, Gary K., Richard G. Knowles, Christopher I. Pogson, Mark Salter, M. Hanlon, and R. Mullin. "Flux Control Coefficients of Glycinamide Ribonucleotide Transformylase for de novo Purine Biosynthesis." In Control of Metabolic Processes. Springer US, 1990. http://dx.doi.org/10.1007/978-1-4757-9856-2_34.

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Bein, Kiflai, and David R. Evans. "Stimulation by 6-Azauridine of de novo Pyrimidine Biosynthesis in BHK 165-23 Cells." In Purine and Pyrimidine Metabolism in Man VIII. Springer US, 1995. http://dx.doi.org/10.1007/978-1-4615-2584-4_117.

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Lichtenthaler, Hartmut K., and Andrea Golz. "Chemical Regulation of Acetyl-Coa Formation and De Novo Fatty Acid Biosynthesis in Plants." In Plant Lipid Metabolism. Springer Netherlands, 1995. http://dx.doi.org/10.1007/978-94-015-8394-7_17.

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Rafaeli, A., V. Soroker, J. A. Klun, and A. K. Raina. "Stimulation of de novo Pheromone Biosynthesis by In Vitro Pheromone Glands of Heliothis SPP." In Insect Neurochemistry and Neurophysiology · 1989 ·. Humana Press, 1990. http://dx.doi.org/10.1007/978-1-4612-4512-4_31.

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Conference papers on the topic "De novo biosynthesis"

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Stamm, N., H. Asperger, M. Ludescher, T. Fehm, and H. Neubauer. "PGRMC1 alters de novo lipid biosynthesis resulting in enhanced oncogenic signaling." In Kongressabstracts zur Tagung 2020 der Deutschen Gesellschaft für Gynäkologie und Geburtshilfe (DGGG). © 2020. Thieme. All rights reserved., 2020. http://dx.doi.org/10.1055/s-0040-1718184.

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Gottlieb, Eyal. "Abstract IA06: De novo purine biosynthesis dictates glutamine dependency of glioblastoma cells." In Abstracts: AACR Special Conference: Metabolism and Cancer; June 7-10, 2015; Bellevue, WA. American Association for Cancer Research, 2016. http://dx.doi.org/10.1158/1557-3125.metca15-ia06.

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Berdyshev, Evgeny, Irina Gorshkova, Biji Mathew, et al. "Inhibition Of Sphingolipid De Novo Biosynthesis Ameliorates Radiation-Induced Lung Inflammation And Fibrosis." In American Thoracic Society 2012 International Conference, May 18-23, 2012 • San Francisco, California. American Thoracic Society, 2012. http://dx.doi.org/10.1164/ajrccm-conference.2012.185.1_meetingabstracts.a2238.

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guo, jun, Chris Tse, and William N. Pappano. "Abstract 2127: Identification of a novel NAMPT inhibition resistance mechanism utilizing the de novo NAD+ biosynthesis pathway." In Proceedings: AACR 107th Annual Meeting 2016; April 16-20, 2016; New Orleans, LA. American Association for Cancer Research, 2016. http://dx.doi.org/10.1158/1538-7445.am2016-2127.

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Ogura, M., N. Tanabe, M. Hamaguchi, T. Hotta та H. Saito. "BIOSYNTHESIS AND SECRETION OF β-THROMBOGLOBULIN BY A HUMAN MEGAKARYOBLASTIC CELL LINE ( MEG-01 )". У XIth International Congress on Thrombosis and Haemostasis. Schattauer GmbH, 1987. http://dx.doi.org/10.1055/s-0038-1644618.

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β-Thromboglobulin ( βTG ) is a well known platelet specific a-granular protein, but synthesis of βTG by human megakaryocytes has not been fully proved. A human megakaryoblastic cell line ( MEG-01 ) was investigated for the presence of βJG in the culture medium and cell lysates using a specific radioimmunoassay ( RIA ). The concentration of βTG increased with time in the serum-free culture medium as well as in the cell lysates as shown in the following table.By an indirect immunofluorescent technique using a monospesific rabbit anti serum against human βTG, βTG antigen was detected in MEG-01 ce
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Colman, R. W., A. Gewirtz, D. L. Wang, et al. "BIOSYNTHESIS AND EXPRESSION OF FACTOR V IN MAGAKARYOCYTES." In XIth International Congress on Thrombosis and Haemostasis. Schattauer GmbH, 1987. http://dx.doi.org/10.1055/s-0038-1642955.

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Coagulation factor V (FV), is a single chain, multifunctional glycoprotein of Mr 350,000 which interacts with a variety of hemostatic proteins such as factor Xa, prothrombin, thrombin and protein C, on the surface of platelets and vascular endothelial cells. FV serves as both a cofactor and substrate in the generation of thrombin and plays a critical regulatory role in both physiologic hemostasis and pathologic thrombosis. The biosynthesis of FV and its subsequent expression are therefore expected to be precisely controlled and may differ in the three sites of synthesis - hepatocytes, endothel
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Mitchell-Ryan, Shermaine K., Lei Wang, Steven Orr, et al. "Abstract 5494: Novel 6-substituted pyrrolo[2,3-d]pyrimidine thienoyl antifolate regioisomers target folate receptor alpha positive ovarian cancer cells via inhibition of de novo purine nucleotide biosynthesis." In Proceedings: AACR 104th Annual Meeting 2013; Apr 6-10, 2013; Washington, DC. American Association for Cancer Research, 2013. http://dx.doi.org/10.1158/1538-7445.am2013-5494.

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Tong, Nian, Aleem Gangjee, Adrianne W. Povrik, Carrie O. Connor, Jianjun Hou, and Larry Matherly. "Abstract 2798: Folate receptor-targeted cancer chemotherapy with novel 6-substituted thieno[2,3-d]pyrimidine compounds with nitrogen and fluorine containing aromatic side chains as de novo purine biosynthesis inhibitors." In Proceedings: AACR Annual Meeting 2018; April 14-18, 2018; Chicago, IL. American Association for Cancer Research, 2018. http://dx.doi.org/10.1158/1538-7445.am2018-2798.

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Wallace-Povirk, Adrianne, Nian Tong, Carrie O'Connor та ін. "Abstract 3983: Tumor-targeting with novel dual-targeted 6-substituted thieno[2,3-d]pyrimidine antifolates via cellular uptake by folate receptor α, and inhibition of de novo purine nucleotide biosynthesis". У Proceedings: AACR Annual Meeting 2018; April 14-18, 2018; Chicago, IL. American Association for Cancer Research, 2018. http://dx.doi.org/10.1158/1538-7445.am2018-3983.

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Yoo, Stephen S., David Cerna, Donna J. Carter, et al. "Abstract B98: Induction of metabolic and oxidative stresses by the novel inhibitor of NAD+ biosynthesis, GMX 1778, for specific killing of human glioblastomas." In Abstracts: AACR-NCI-EORTC International Conference: Molecular Targets and Cancer Therapeutics--Nov 15-19, 2009; Boston, MA. American Association for Cancer Research, 2009. http://dx.doi.org/10.1158/1535-7163.targ-09-b98.

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