Relevant bibliographies by topics / Diatoms – Classification

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  1. Journal articles
  2. Dissertations / Theses
  3. Books
  4. Book chapters
  5. Conference papers

Academic literature on the topic 'Diatoms – Classification'

Author: Grafiati
Published: 4 June 2021
Last updated: 2 February 2022

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Journal articles on the topic "Diatoms – Classification"

1

Harwood, David M., Vladimir A. Nikolaev, and Diane M. Winter. "Cretaceous Records of Diatom Evolution, Radiation, and Expansion." Paleontological Society Papers 13 (October 2007): 33–59. http://dx.doi.org/10.1017/s1089332600001455.

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New information and discussions regarding Mesozoic diatoms presented over the last decade advanced our knowledge of their origin and early history. The oldest confirmed centric diatom fossils are presented here from the earliest Cretaceous, and araphid and raphid pennate diatoms now date from the Late Cretaceous; all from terrestrial sediments. Molecular sequencing helped clarify relationships between diatom lineages, and verify the position of diatoms within the heterokontophytes. Molecular clock approaches estimate a diatom origin near ~135 Ma, but not before 240 Ma. Biomarkers in marine sed
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Mendes, Tânia, Ana Raquel Calapez, Carmen L. Elias, Salomé F. P. Almeida, and Maria João Feio. "Comparing alternatives for combining invertebrate and diatom assessment in stream quality classification." Marine and Freshwater Research 65, no. 7 (2014): 612. http://dx.doi.org/10.1071/mf13135.

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The present study aimed to determine if a predictive model integrating freshwater assemblages from different trophic levels (macroinvertebrates and diatoms) produces a more sensitive assessment of stream health than single-assemblage assessments combined a posteriori. For this purpose, individual and combined models based on two approaches (BEAST and RIVPACS) were developed for Portuguese streams: two for diatoms; two for macroinvertebrates; and two combining diatoms and macroinvertebrates as a single community. Twenty-three sites affected by organic contamination, industrial effluents and min
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Stepanova, V. A., and R. M. Gogorev. "Emendation of Fragilariophyceae classification (Bacillariophyta)." Novosti sistematiki nizshikh rastenii 49 (2015): 75–91. http://dx.doi.org/10.31111/nsnr/2015.49.75.

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An historical review of some approaches to the classification of diatoms is presented. The class Fragilariophyceae was described by F. Round et al. (1990) and consisted of 54 genera of araphid diatoms. Over the past 25 years, 43 genera and two families within the class have been described. The systematic position of the family Plagiogrammaceae in the class of araphid diatoms was based on phylogenetic molecular studies. According to these data and unique morphological features, we propose a new order, Plagiogrammales ord. nov., with the type genus Plagiogramma. The name of the order Protoraphid
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Salido, Jesús, Carlos Sánchez, Jesús Ruiz-Santaquiteria, Gabriel Cristóbal, Saul Blanco, and Gloria Bueno. "A Low-Cost Automated Digital Microscopy Platform for Automatic Identification of Diatoms." Applied Sciences 10, no. 17 (2020): 6033. http://dx.doi.org/10.3390/app10176033.

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Currently, microalgae (i.e., diatoms) constitute a generally accepted bioindicator of water quality and therefore provide an index of the status of biological ecosystems. Diatom detection for specimen counting and sample classification are two difficult time-consuming tasks for the few existing expert diatomists. To mitigate this challenge, in this work, we propose a fully operative low-cost automated microscope, integrating algorithms for: (1) stage and focus control, (2) image acquisition (slide scanning, stitching, contrast enhancement), and (3) diatom detection and a prospective specimen c
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Puccinelli, Camilla, Stefania Marcheggiani, and Laura Mancini. "A Patented Rapid Method for Identification of Italian Diatom Species." International Journal of Environmental Research and Public Health 16, no. 20 (2019): 3933. http://dx.doi.org/10.3390/ijerph16203933.

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The study of diatoms—unicellular algae of the class Bacillariophyceae—has several applications, first and foremost the evaluation of freshwater ecosystem quality according to the Water Frame Directive 2000/60/EC (WFD). Identification at the species level is a crucial step in diatom studies, considering that species belonging to the same genus have different geographical distributions and different ecological requirements. The Rapid Method for Identification of Italian Diatom Species is aimed at guiding users in the classification of freshwater diatom species. It consists of a digitized flow ch
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Memmolo, Pasquale, Pierluigi Carcagnì, Vittorio Bianco, et al. "Learning Diatoms Classification from a Dry Test Slide by Holographic Microscopy." Sensors 20, no. 21 (2020): 6353. http://dx.doi.org/10.3390/s20216353.

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Diatoms are among the dominant phytoplankters in marine and freshwater habitats, and important biomarkers of water quality, making their identification and classification one of the current challenges for environmental monitoring. To date, taxonomy of the species populating a water column is still conducted by marine biologists on the basis of their own experience. On the other hand, deep learning is recognized as the elective technique for solving image classification problems. However, a large amount of training data is usually needed, thus requiring the synthetic enlargement of the dataset
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Olszyński, Rafał M., Ewelina Szczepocka, and Joanna Żelazna-Wieczorek. "Critical multi-stranded approach for determining the ecological values of diatoms in unique aquatic ecosystems of anthropogenic origin." PeerJ 7 (December 5, 2019): e8117. http://dx.doi.org/10.7717/peerj.8117.

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Background The ecological state of surface waters is typically assessed by a multi-aspect approach based on a determination of its chemical and physical parameters, by hydromorphology and the use of indicator organisms such as benthic diatoms. By assigning ecological indicator values, it is possible to create diatom indices which serve as the basic tool in assessing the ecological status of surface waters. These ecological indicator values are set according to classification systems, such as the Van Dam, Mertens & Sinkeldam (1994) system, which classifies species of diatoms according to se
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Julius, Matthew L. "Perspectives on the Evolution and Diversification of the Diatoms." Paleontological Society Papers 13 (October 2007): 1–12. http://dx.doi.org/10.1017/s1089332600001431.

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The understanding of diatom evolution has progressed greatly over the last two decades. Existing data sets have been reanalyzed, new data sets have been generated, and new tools have been employed. Hindering progress is the seemingly endless number of diatom species remaining to be described and relative small number of investigators active in the field. This problem is further confounded by the dramatic reorganization of generic level classification in the group. Despite these problems, many conclusions can be made about prior hypotheses concerning the group's development. Most notably, the o
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Hallegraeff, GM, and DD Reid. "Phytoplankton species successions and their hydrological environment at a coastal station off Sydney." Marine and Freshwater Research 37, no. 3 (1986): 361. http://dx.doi.org/10.1071/mf9860361.

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Phytoplankton species occurrence was studied during 1978-1981 at a coastal station off Sydney and succession patterns were sought using polythetic agglomerative classification analysis. Three major phytoplankton categories were distinguished: (1) a large group of species (including most nanoplankton), which were present throughout the year; (2) a group of diatom species, which bloomed following episodic nutrient enrichments in spring, early summer, autumn and winter; (3) a group of warm-water species (e.g. Trichodesmium), which were associated with admixture of tropical water masses. Gross fea
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Roberts, Wade R., Kala M. Downey, Elizabeth C. Ruck, Jesse C. Traller, and Andrew J. Alverson. "Improved Reference Genome for Cyclotella cryptica CCMP332, a Model for Cell Wall Morphogenesis, Salinity Adaptation, and Lipid Production in Diatoms (Bacillariophyta)." G3 Genes|Genomes|Genetics 10, no. 9 (2020): 2965–74. http://dx.doi.org/10.1534/g3.120.401408.

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Abstract The diatom, Cyclotella cryptica, is a well-established model species for physiological studies and biotechnology applications of diatoms. To further facilitate its use as a model diatom, we report an improved reference genome assembly and annotation for C. cryptica strain CCMP332. We used a combination of long- and short-read sequencing to assemble a high-quality and contaminant-free genome. The genome is 171 Mb in size and consists of 662 scaffolds with a scaffold N50 of 494 kb. This represents a 176-fold decrease in scaffold number and 41-fold increase in scaffold N50 compared to th
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Dissertations / Theses on the topic "Diatoms – Classification"

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Gröger, Philip. "Establishing super-resolution imaging of biosilica-embedded proteins in diatoms." Doctoral thesis, Saechsische Landesbibliothek- Staats- und Universitaetsbibliothek Dresden, 2017. http://nbn-resolving.de/urn:nbn:de:bsz:14-qucosa-227150.

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Kieselalgen – auch Diatomeen genannt – verfügen über die einzigartige Fähigkeit, nanostrukturierte, hierarchisch aufgebaute Zellwände aus Siliziumdioxid – auch als Biosilica bekannt – mit beispielloser Genauigkeit und Reproduzierbarkeit zu bilden. Ein tieferes Verständnis für diesen Prozess, der als “Biomineralisation“ bekannt ist, ist nicht nur auf dem Gebiet der Grundlagenforschung zu Kieselalgen sehr bedeutsam, sondern auch für die Nutzung dieser Nanostrukturierung in den Materialwissenschaften oder der Nanobiotechnologie. Nach dem derzeitigem Stand der Wissenschaft wird diese Strukturierun
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Pytlik, Nathalie, and Eike Brunner. "Diatoms as potential “green” nanocomposite and nanoparticle synthesizers: challenges, prospects, and future materials applications." Cambridge University Press, 2018. https://tud.qucosa.de/id/qucosa%3A70668.

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Diatoms are unicellular, eukaryotic microalgae inhabiting nearly all aquatic habitats. They are famous for their micro- and nanopatterned silicabased cell walls, which are envisioned for various technologic purposes. Within this review article, we summarize recent in vivo modifications of diatom biosilica with respect to the following questions: (i) Which metals are taken up by diatoms and eventually processed into nanoparticles (NPs)? (ii) Are these NPs toxic for the diatoms and––if so––what factors influence toxicity? (iii) What is the mechanism underlying NP synthesis and subsequent metabol
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Pytlik, Nathalie, Benjamin Klemmed, Susanne Machill, Alexander Eychmüller, and Eike Brunner. "In vivo uptake of gold nanoparticles by the diatom Stephanopyxis turris." Elsevier, 2019. https://tud.qucosa.de/id/qucosa%3A35319.

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Nanoparticle (NP) implementation in industry has increased during the last years. However, the consequences of NP release to the environment have not been fully understood yet and long-term effects are hardly predictable. Information regarding a possible NP uptake by organisms is urgently needed. Here, we investigate the uptake of presynthesized AuNPs of different diameters by living diatoms. To better understand the influence of NPs on diatoms, cells were monitored in vivo using Surface Enhanced Raman Spectroscopy (SERS). By 3D Raman imaging, AuNPs with diameters ≥50 nm could clearly be localize
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Kammer, Martin. "Schwingungsspektroskopische Untersuchungen zur Biomineralisation." Doctoral thesis, Saechsische Landesbibliothek- Staats- und Universitaetsbibliothek Dresden, 2012. http://nbn-resolving.de/urn:nbn:de:bsz:14-qucosa-97585.

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Die Schwingungsspektroskopie, besonders die Raman-Spektroskopie, stellt ein wichtiges Werkzeug für Untersuchungen von Biomineralien dar. Raman-Spektroskopie wurde zur Untersuchung der organischen und anorganischen Bestandteile von Schwammskeletten eingesetzt. Die Raman-Spektroskopie trug auch zur Charakterisierung von biomimetischen Silikat-Präzipitaten bei. Durch ortsaufgelöste Raman-Spektroskopie konnte erstmalig die Verteilung von organischem Material in den extrahierten Silikatzellwänden von Kieselalgen nachgewiesen werden. Die ortsaufgelöste Raman-Spektroskopie wurde ebenfalls zur Unters
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Claudon, Nicolas. "Classification automatique des diatomées : une approche par les motifs des structures internes." Thèse, Université du Québec à Trois-Rivières, 2007. http://depot-e.uqtr.ca/1244/1/030024826.pdf.

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Siddour, Abdelkader. "Classification automatique des diatomées : une approche basée sur le contour et la géométrie." Thèse, Université du Québec à Trois-Rivières, 2007. http://depot-e.uqtr.ca/1243/1/030004296.pdf.

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Uhlmann, Mathias. "Dynamics of diatomic molecules in intense laser fields: Alignment, Ionization and Fragmentation of dimers: Die Dynamik zweiatomiger Moleküle in intensiven Laserfeldern." Doctoral thesis, Technische Universität Dresden, 2005. https://tud.qucosa.de/id/qucosa%3A24713.

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A realistic description of ionization in intense laser fields is implemented into the Non-Adiabatic Quantum Molecular Dynamics (NA-QMD) formalism. First, the error of a finite basis expansion is considered and a new measure is proposed for time-dependent calculations. This is used to investigate systematically the influence of the used basis set in calculations on the hydrogen atom in intense laser fields. Second, absorbing boundary conditions in basis expansion are introduced via an imaginary potential into the effective one-particle Hamiltonian. It is shown that the used form of the absorber
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Handt, Jan. "Ab-initio molecular dynamics studies of laser- and collision-induced processes in multielectron diatomics, organic molecules and fullerenes." Doctoral thesis, Saechsische Landesbibliothek- Staats- und Universitaetsbibliothek Dresden, 2010. http://nbn-resolving.de/urn:nbn:de:bsz:14-qucosa-62279.

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This work presents applications of an ab-initio molecular dynamics method, the so-called nonadiabatic quantum molecular dynamics (NA-QMD), for various molecular systems with many electronic and nuclear degrees of freedom. Thereby, the nuclei will be treated classically and the electrons with time-dependent density functional theory (TD-DFT) in basis expansion. Depending on the actual system and physical process, well suited basis sets for the Kohn-Sham orbitals has to be chosen. For the ionization process a novel absorber acting in the energy space as well as additional basis functions will be
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Von, Falkenhayn Louise. "An assessment of the use of Bacillariophyceae as biological monitors of heavy metal pollution in Australian tropical streams." 2008. http://hdl.handle.net/2440/58441.

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During the recessional flow period of 2004, benthic diatoms were sampled from four catchments in the tropics of the Northern Territory of Australia. Each of the catchments showed evidence of acid mine drainage. Diatoms were used in conjunction with physical and chemical water parameters to provide a biomonitoring approach with the ultimate goal to assess the water quality of the mine impacted catchments. A total of 267 species of diatoms from 45 genera were recorded from 50 sites in the Northern Territory. One of the primary aims of this study was to assess diatom classification techniques, mo
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Pawolski, Damian. "Structures and silica forming properties of insoluble organic matrices from diatoms." Doctoral thesis, 2018. https://tud.qucosa.de/id/qucosa%3A31116.

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Since the 18th-century scientists are studying diatoms, fascinated by their beauty and diversity. Their nano- and micropatterned biosilica cell walls are outstanding examples of biologically controlled mineral formation. Although the knowledge about diatom cell wall formation increased over the last 60 years, the process is still far away from being completely understood. Diatom cell walls exhibit highly interesting material properties, making them appealing to material scientists. Due to those properties, diatom cell walls are on the brink of becoming powerful tools in nanotechnology. However
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Books on the topic "Diatoms – Classification"

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Song, Yong-Kyoo. Freshwater diatom identification manual: With Lake Michigan diatoms. s.n., 2002.

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contributor, Laslandes Berengere, Bennett Danuta contributor, Thomas Evan contributor, Brady Mariska contributor, and Graeff Carrie contributor, eds. Diatoms of the United States. J. Cramer in der Gebr. Borntraeger Verlagsbuchhandlung, 2014.

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Daryl, Fedje, and Poulin M, eds. Marine and non-marine diatoms from the Haida Gwaii Archipelago and surrounding coasts, Northeastern Pacific, Canada. J. Cramer, 2003.

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Peter, Tyler, and Vyverman Wim, eds. Diatoms of meromictic lakes adjacent to the Gordon River, and of the Gordon River estuary in south-west Tasmania. J. Cramer, 1997.

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Plagiotropis Pfitzer and Tropidoneis Cleve: A summary account. J. Cramer, 1988.

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A survey of alveolate species of the diatom genus Coccineis (Ehr.) with remarks on the new section Alveolatae. J. Cramer in der Gebrüder Borntraeger Verlagsbuchhandlung, 2005.

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I, Maidana Nora, ed. Taxonomic and ecological studies of the Paraná River diatom flora (Argentina). J. Cramer, 1997.

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The diatom flora of the Laptev Sea (Arctic Ocean): By Holger Cremer. J. Cramer, 1998.

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Jensen, Karin G. The genus Chaetoceros (Bacillariophyceae) in inner Danish coastal waters. [Council for Nordic Publications in Botany], 1998.

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Diatom taxonomy and ecology: From local discoveries to global impacts : Festschrift in honor of Prof. Dr. Horst Lange-Bertalot's 75th birthday. J. Cramer, 2012.

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Book chapters on the topic "Diatoms – Classification"

1

Libreros, Jose, Gloria Bueno, Maria Trujillo, and Maria Ospina. "Automated Identification and Classification of Diatoms from Water Resources." In Progress in Pattern Recognition, Image Analysis, Computer Vision, and Applications. Springer International Publishing, 2019. http://dx.doi.org/10.1007/978-3-030-13469-3_58.

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Gutiérrez Lira, Emanuel, Fathallah Nouboud, Alain Chalifour, and Yvon Voisin. "Image Segmentation and Object Extraction for Automatic Diatoms Classification." In Lecture Notes in Computer Science. Springer International Publishing, 2018. http://dx.doi.org/10.1007/978-3-319-94211-7_7.

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Naumoski, Andreja, and Kosta Mitreski. "Diatoms Classification with Weighted Averaging Fuzzy Operators for Eutrophication Prevention." In Information Technologies in Environmental Engineering. Springer Berlin Heidelberg, 2011. http://dx.doi.org/10.1007/978-3-642-19536-5_4.

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Vallez, Noelia, Anibal Pedraza, Carlos Sánchez, Jesus Salido, Oscar Deniz, and Gloria Bueno. "Diatom Feature Extraction and Classification." In Modern Trends in Diatom Identification. Springer International Publishing, 2020. http://dx.doi.org/10.1007/978-3-030-39212-3_9.

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Naumoski, Andreja, and Kosta Mitreski. "Diatom Classification with Novel Bell Based Classification Algorithm." In Communications in Computer and Information Science. Springer Berlin Heidelberg, 2011. http://dx.doi.org/10.1007/978-3-642-19325-5_25.

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Williams, David M., and J. Patrick Kociolek. "An Overview of Diatom Classification with Some Prospects for the Future." In The Diatom World. Springer Netherlands, 2011. http://dx.doi.org/10.1007/978-94-007-1327-7_3.

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Williams, David M. "Diatom Classifications: What Purpose Do They Serve?" In Modern Trends in Diatom Identification. Springer International Publishing, 2020. http://dx.doi.org/10.1007/978-3-030-39212-3_2.

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Sánchez, Carlos, Noelia Vállez, Gloria Bueno, and Gabriel Cristóbal. "Diatom Classification Including Morphological Adaptations Using CNNs." In Pattern Recognition and Image Analysis. Springer International Publishing, 2019. http://dx.doi.org/10.1007/978-3-030-31332-6_28.

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Forero-Vargas, M., R. Redondo, and G. Cristobal. "Diatom Screening and Classification by Shape Analysis." In Visual Content Processing and Representation. Springer Berlin Heidelberg, 2003. http://dx.doi.org/10.1007/978-3-540-39798-4_10.

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Naumoski, Andreja, Svetislav Krstić, and Kosta Mitreski. "Novel Inverse Sigmoid Fuzzy Approach for Water Quality Diatom Classification." In Advances in Intelligent and Soft Computing. Springer Berlin Heidelberg, 2012. http://dx.doi.org/10.1007/978-3-642-28664-3_19.

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Conference papers on the topic "Diatoms – Classification"

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Yan, Weizhen, and Nicholas George. "Automatic classification of biological specimens: diatoms." In Frontiers in Optics. OSA, 2004. http://dx.doi.org/10.1364/fio.2004.fwc2.

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Carcagni, Pierluigi, Andouglas Goncalves da Silva, Pasquale Memmolo, et al. "An investigation on deep learning approaches for diatoms classification." In Multimodal Sensing and Artificial Intelligence: Technologies and Applications II, edited by Shahriar Negahdaripour, Ettore Stella, Dariusz Ceglarek, and Christian Möller. SPIE, 2021. http://dx.doi.org/10.1117/12.2593252.

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Al Shatnawi, Hend H., and Paola Bandini. "Limitations of Classifications for Soils that Contain Diatom Microfossils." In IFCEE 2018. American Society of Civil Engineers, 2018. http://dx.doi.org/10.1061/9780784481585.013.

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Naumoski, Andreja, Georgina Mirceva, and Kosta Mitreski. "Fuzzy models with GIS for water quality diatom-indicator classification." In 2011 Eighth International Conference on Fuzzy Systems and Knowledge Discovery (FSKD 2011). IEEE, 2011. http://dx.doi.org/10.1109/fskd.2011.6019732.

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Luo, Jinfei, Qiaoqi Luo, Yahui Gao, Changping Chen, Junrong Liang, and Chenhui Yang. "A Svm-Based Algorithm for Automatic Species Classification of a Marine Diatom Genus Coscinodiscus Ehrenberg." In 2010 4th International Conference on Bioinformatics and Biomedical Engineering (iCBBE 2010). IEEE, 2010. http://dx.doi.org/10.1109/icbbe.2010.5515840.

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