Relevant bibliographies by topics / DNA fingerprinting of fungi

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  1. Journal articles
  2. Dissertations / Theses
  3. Books
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Academic literature on the topic 'DNA fingerprinting of fungi'

Author: Grafiati
Published: 4 June 2021
Last updated: 1 February 2022

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Journal articles on the topic "DNA fingerprinting of fungi"

1

Soll, David R. "The Ins and Outs of DNA Fingerprinting the Infectious Fungi." Clinical Microbiology Reviews 13, no. 2 (April 1, 2000): 332–70. http://dx.doi.org/10.1128/cmr.13.2.332.

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SUMMARY DNA fingerprinting methods have evolved as major tools in fungal epidemiology. However, no single method has emerged as the method of choice, and some methods perform better than others at different levels of resolution. In this review, requirements for an effective DNA fingerprinting method are proposed and procedures are described for testing the efficacy of a method. In light of the proposed requirements, the most common methods now being used to DNA fingerprint the infectious fungi are described and assessed. These methods include restriction fragment length polymorphisms (RFLP), R
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DeScenzo, R. A. "Use of (CAT)5as a DNA Fingerprinting Probe for Fungi." Phytopathology 84, no. 5 (1994): 534. http://dx.doi.org/10.1094/phyto-84-534.

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Meyer, Wieland, Anke Koch, Claudia Niemann, Birgit Beyermann, J�rg T. Epplen, and Thomas B�rner. "Differentiation of species and strains among filamentous fungi by DNA fingerprinting." Current Genetics 19, no. 3 (March 1991): 239–42. http://dx.doi.org/10.1007/bf00336493.

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Lockhart, S. R., C. Pujol, S. Joly, and D. R. Soll. "Development and use of complex probes for DNA fingerprinting the infectious fungi." Medical Mycology 39, no. 1 (January 2001): 1–8. http://dx.doi.org/10.1080/mmy.39.1.1.8.

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WATANABE, M., K. LEE, K. GOTO, S. KUMAGAI, Y. SUGITA-KONISHI, and Y. HARA-KUDO. "Rapid and Effective DNA Extraction Method with Bead Grinding for a Large Amount of Fungal DNA." Journal of Food Protection 73, no. 6 (June 1, 2010): 1077–84. http://dx.doi.org/10.4315/0362-028x-73.6.1077.

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To identify a rapid method for extracting a large amount of DNA from fungi associated with food hygiene, extraction methods were compared using fungal pellets formed rapidly in liquid media. Combinations of physical and chemical methods or commercial kits were evaluated with 3 species of yeast, 10 species of ascomycetous molds, and 4 species of zygomycetous molds. Bead grinding was the physical method, followed by chemical methods involving sodium dodecyl sulfate (SDS), cetyl trimethyl ammonium bromide (CTAB), and benzyl chloride and two commercial kits. Quantity was calculated by UV absorbanc
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Chiang, Yu-Chung, Chang-Hung Chou, Shong Huang, and Tzen-Yuh Chiang. "Possible consequences of fungal contamination on the RAPD fingerprinting in Miscanthus (Poaceae)." Australian Journal of Botany 51, no. 2 (2003): 197. http://dx.doi.org/10.1071/bt02021.

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Fungal contamination has been frequently reported in higher plants. In Miscanthus species, a wide range of fungal flora has also been recorded previously, including an investigation based on nrITS amplification. In order to understand the effects of the fungal genomes on the random amplified polymorphic DNA (RAPD) fingerprinting, callus specimens were obtained from the tissue culture of shoot apices of Miscanthus. RAPD fingerprinting with 60 oligoprimers was conducted with genomic DNA extracted from leaf tissue collected in the field and from the greenhouse, as well as callus derived from the
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Becerra-LopezLavalle, L. Augusto, Jennifer A. Saleeba, and Bruce R. Lyon. "Molecular identification of fungi isolated from stem tissue of Upland cotton (Gossypium hirsutum)." Australian Journal of Botany 53, no. 6 (2005): 571. http://dx.doi.org/10.1071/bt04092.

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Molecular techniques such as restriction fragment length polymorphism (RFLP) analysis, random amplification of polymorphic DNA (RAPD) fingerprinting, and DNA sequencing and database comparison, were employed to identify fungi isolated from field-grown cotton plants (Gossypium hirsutum L.). DNA fragments of between 510 and 590 bp, representing the two rDNA (rDNA) internal transcribed spacers (ITS1 and ITS2) and the intervening 5.8S rRNA gene, were amplified from the fungi with eukaryotic consensus primers. Subsequent digestion with the restriction endonucleases AluI, CfoI, HaeIII, HinfI and Hpa
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Oh, S., D. P. Kamdem, D. E. Keathley, and K. H. Han. "Detection and Species Identification of Wood-Decaying Fungi by Hybridization of Immobilized Sequence-Specific Oligonucleotide Probes with PCR-Amplified Fungal Ribosomal DNA Internal Transcribed Spacers." Holzforschung 57, no. 4 (June 26, 2003): 346–52. http://dx.doi.org/10.1515/hf.2003.052.

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SummaryWe developed an effective detection method for wood-decaying fungi by hybridization of immobilized Sequence-Specific Oligonucleotide Probes with florescent-labeled PCR-amplified fungal rDNA internal transcribed spacer sequences. This method takes advantage of both the sequence specificity of Southern blot hybridization and the sensitivity of the previously reported PCR-based fungal species identification methods. Bothin vitrocultured fungal strains and naturally decaying wood samples were used to demonstrate that this method is robust and practical for detection of incipient wood-decayi
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Gadkar, Vijay, Alok Adholeya, and T. Satyanarayana. "Randomly amplified polymorphic DNA using the M13 core sequence of the vesicular–arbuscular mycorrhizal fungi Gigaspora margarita and Gigaspora gigantea." Canadian Journal of Microbiology 43, no. 8 (August 1, 1997): 795–98. http://dx.doi.org/10.1139/m97-115.

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Vesicular–arbuscular mycorrhizal (VAM) fungi are obligate symbionts, and a primary benefit provided to the host is the alleviation of stress. The recalcitrance of these fungi to grow in pure culture has spurred researchers to develop an alternative form of cultivation, namely the root organ culture (ROC). This synthetic form of production is new and efforts were made to use randomly amplified polymorphic DNA with the M13 minisatellite sequence as the polymerase chain reaction primer to look into polymorphism, if any, in the spores of Gigaspora margarita produced both in vitro and in situ (soil
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Witfeld, Frederick, Dominik Begerow, and Marco Alexandre Guerreiro. "Improved strategies to efficiently isolate thermophilic, thermotolerant, and heat-resistant fungi from compost and soil." Mycological Progress 20, no. 3 (March 2021): 325–39. http://dx.doi.org/10.1007/s11557-021-01674-z.

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AbstractThermophilic, thermotolerant and heat-resistant fungi developed different physiological traits, enabling them to sustain or even flourish under elevated temperatures, which are life-hostile for most other eukaryotes. With the growing demand of heat-stable molecules in biotechnology and industry, the awareness of heat-adapted fungi as a promising source of respective enzymes and biomolecules is still increasing. The aim of this study was to test two different strategies for the efficient isolation and identification of distinctly heat-adapted fungi from easily accessible substrates and
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Dissertations / Theses on the topic "DNA fingerprinting of fungi"

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Kasiamdari, Rina Sri. "Interactions between arbuscular mycorrhizal fungi and other root-infecting fungi." Title page, contents and abstract only, 2001. http://web4.library.adelaide.edu.au/theses/09PH/09phk1887.pdf.

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Roring, Solvig Mary Margaret. "DNA fingerprinting of Mycobacterium bovis." Thesis, Queen's University Belfast, 1998. http://ethos.bl.uk/OrderDetails.do?uin=uk.bl.ethos.287426.

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Zhu, Jiahui. "DNA fingerprinting in Oryza sativa L." Thesis, University of East Anglia, 1996. http://ethos.bl.uk/OrderDetails.do?uin=uk.bl.ethos.338095.

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Kennedy, Bobbie-Jo. "DNA fingerprinting of Native American skeletal remains." Virtual Press, 1995. http://liblink.bsu.edu/uhtbin/catkey/958779.

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The purpose of this project was to determine if the human skeletal remains of two distinct Native American cemeteries, found in close geographic proximity, represent the same population. These archaeological sites are similar in location and artifacts. Burial practices, however, vary between the sites. These differences may represent class distinction or a difference in the times the cemeteries were used. Radiocarbon techniques have given dates of AD 230±300 and AD 635±105 for these two sites. Several methods of DNA isolation were compared for their ability to yield PCR amplifiable DNA. DNA is
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Meng, Anming. "DNA fingerprinting and minisatellite variation of swans." Thesis, University of Nottingham, 1990. http://eprints.nottingham.ac.uk/13889/.

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Genetic variation in natural populations of four species of swans (Cygnus bewickii, Cygnus olor, Cygnus buccinator and Cygnus cygnus) has been investigated by examining minisatellite loci using human DNA fingerprinting probes pSPT19.6 and pSPT18.15. It has been found that swan minisatellites are highly variable. However, the degree of variation depends on the population structure and species. Bewick's Swans at Slimbridge have the highest degree of minisatellite variation, Whooper Swans at Caerlaverock come second, and then Mute Swans, and Trumpeter Swans in Montana. Comparative study of DNA fi
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Carter, Royston Edwin. "Development adaptations & applications of DNA fingerprinting." Thesis, University of Nottingham, 1992. http://ethos.bl.uk/OrderDetails.do?uin=uk.bl.ethos.336944.

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Derksen, Linda Anne. "Agency and structure in the history of DNA profiling : the stabilization and standardization of a new technology /." Diss., Connect to a 24 p. preview or request complete full text in PDF format. Access restricted to UC IP addresses, 2003. http://wwwlib.umi.com/cr/ucsd/fullcit?p3083460.

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何兆康 and Siu-hong Ho. "Isolation and characterization of Panax Ginseng repetitive DNA sequences for DNA fingerprinting." Thesis, The University of Hong Kong (Pokfulam, Hong Kong), 1998. http://hub.hku.hk/bib/B31215282.

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Ho, Siu-hong. "Isolation and characterization of Panax Ginseng repetitive DNA sequences for DNA fingerprinting /." Hong Kong : University of Hong Kong, 1998. http://sunzi.lib.hku.hk/hkuto/record.jsp?B19737816.

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Groft, Donald G., and University of Lethbridge Faculty of Arts and Science. "DNA fingerprinting of Alberta bull trout (Salvelinus confluentus) populations." Thesis, Lethbridge, Alta. : University of Lethbridge, Faculty of Arts and Science, 1997, 1997. http://hdl.handle.net/10133/80.

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Bull trout (Salvelinus confluentus) populations from Alberta river drainage systems were compared using molecular techniques. Restriction fragment length polymorphisms (RFLP's) within the NDI and ND5/6 regions of the mitochondrial genome were observed. In addition, randomly amplified polymorphic DNA profiles (RAPD's) from total genomic DNA extracts were compared. Interdrainage comparisons using mtDNA revealed significant population heterogeneity among Alberta bull trout. Percent sequence divergence in mtDNA ranged from 0.14% to 0.92%. Most fish in each population were composed of a small numbe
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Books on the topic "DNA fingerprinting of fungi"

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DNA fingerprinting. New York: F. Watts, 1991.

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Krawczak, Michael. DNA fingerprinting. Oxford, UK: Bios Scientific Publishers, 1994.

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Kirby, Lorne T. DNA Fingerprinting. London: Palgrave Macmillan UK, 1990. http://dx.doi.org/10.1007/978-1-349-12040-6.

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J, Schmidtke, ed. DNA fingerprinting. 2nd ed. Oxford: BIOS Scientific, 1998.

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Epplen, Jörg T., and Thomas Lubjuhn, eds. DNA Profiling and DNA Fingerprinting. Basel: Birkhäuser Basel, 1999. http://dx.doi.org/10.1007/978-3-0348-7582-0.

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Kouvatsou, Kyriaki. DNA fingerprinting for yeasts. Manchester: UMIST, 1993.

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Kirby, Lorne T. DNA fingerprinting: An introduction. New York: Oxford University Press, 1992.

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Kirby, Lorne T. DNA fingerprinting: An introduction. New York: Macmillan, 1990.

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Kirby, Lorne T. DNA fingerprinting: An introduction. New York: Oxford University Press, 1997.

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DNA fingerprinting: An introduction. New York: Stockton Press, 1990.

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Book chapters on the topic "DNA fingerprinting of fungi"

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Meyer, W., E. Lieckfeldt, K. Kuhls, E. Z. Freedman, T. Börner, and T. G. Mitchell. "DNA- and PCR-fingerprinting in fungi." In DNA Fingerprinting: State of the Science, 311–20. Basel: Birkhäuser Basel, 1993. http://dx.doi.org/10.1007/978-3-0348-8583-6_28.

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Gresshoff, P. M., F. Ghassemi, R. A. Brewer, and E. G. O’Neill. "DNA Amplification Fingerprinting of Mycorrhizal Fungi and Associated Plant Materials Using Arbitrary Primers." In Mycorrhiza Manual, 499–513. Berlin, Heidelberg: Springer Berlin Heidelberg, 1998. http://dx.doi.org/10.1007/978-3-642-60268-9_33.

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Mitchelson, Keith R., and Salvatore Moricca. "DNA Fingerprinting Methods for Microbial Pathogens: Application to Diagnostics, Taxonomy and Plant Disease Management." In Integrated Management of Diseases Caused by Fungi, Phytoplasma and Bacteria, 333–64. Dordrecht: Springer Netherlands, 2008. http://dx.doi.org/10.1007/978-1-4020-8571-0_16.

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Steiner, Ursula. "DNA Fingerprinting." In Fachenglisch für BioTAs und BTAs, 103–11. Berlin, Heidelberg: Springer Berlin Heidelberg, 2020. http://dx.doi.org/10.1007/978-3-662-60666-7_4.

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Parkin, David T., and J. H. Wetton. "DNA Fingerprinting." In Molecular Techniques in Taxonomy, 145–57. Berlin, Heidelberg: Springer Berlin Heidelberg, 1991. http://dx.doi.org/10.1007/978-3-642-83962-7_10.

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Carter, Royston E. "DNA Fingerprinting." In Molecular Techniques in Taxonomy, 323–28. Berlin, Heidelberg: Springer Berlin Heidelberg, 1991. http://dx.doi.org/10.1007/978-3-642-83962-7_21.

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Kirby, Lorne T. "DNA Amplification." In DNA Fingerprinting, 75–90. London: Palgrave Macmillan UK, 1990. http://dx.doi.org/10.1007/978-1-349-12040-6_5.

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Kirby, Lorne T. "Introduction." In DNA Fingerprinting, 1–5. London: Palgrave Macmillan UK, 1990. http://dx.doi.org/10.1007/978-1-349-12040-6_1.

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Melson, Kenneth E. "Legal and Ethical Considerations." In DNA Fingerprinting, 189–215. London: Palgrave Macmillan UK, 1990. http://dx.doi.org/10.1007/978-1-349-12040-6_10.

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Kirby, Lorne T. "Case Applications." In DNA Fingerprinting, 217–59. London: Palgrave Macmillan UK, 1990. http://dx.doi.org/10.1007/978-1-349-12040-6_11.

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Conference papers on the topic "DNA fingerprinting of fungi"

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STATHOPOULOU, I. O., G. A. TSIHRINTZIS, K. KOLLIA, and A. VELEGRAKI. "CLUSTERING AND CLASSIFICATION OF ELECTROPHORESIS STRANDS FOR FUNGI FINGERPRINTING." In Proceedings of the Seventh International Workshop. WORLD SCIENTIFIC, 2006. http://dx.doi.org/10.1142/9789812773197_0040.

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Lee, Michael. "DNA Fingerprinting of Crop Germplasm." In Proceedings of the 1992 Crop Production and Protection Conference. Iowa State University, Digital Press, 1993. http://dx.doi.org/10.31274/icm-180809-450.

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Williams, McKay D., Sheldon A. Munns, Michael A. Temple, and Michael J. Mendenhall. "RF-DNA Fingerprinting for Airport WiMax Communications Security." In 2010 4th International Conference on Network and System Security (NSS). IEEE, 2010. http://dx.doi.org/10.1109/nss.2010.21.

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Chen, C. H. Winston, Kai Tang, N. I. Taranenko, S. L. Allman, and L. Y. Ch'ang. "Laser mass spectrometry for DNA fingerprinting for forensic applications." In SPIE's 1994 International Symposium on Optics, Imaging, and Instrumentation, edited by Richard J. Mammone and J. David Murley, Jr. SPIE, 1994. http://dx.doi.org/10.1117/12.191883.

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Clouting, C., E. Liebana, Robert H. Davies, L. Garcia-Migura, and S. Bedford. "DNA fingerprinting of S. typhimurium from a pig longitudinal study." In Fifth International Symposium on the Epidemiology and Control of Foodborn Pathogens in Pork. Iowa State University, Digital Press, 2003. http://dx.doi.org/10.31274/safepork-180809-522.

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Wilson, Aaron J., Donald R. Reising, and T. Daniel Loveless. "Integration of Matched Filtering within the RF-DNA Fingerprinting Process." In GLOBECOM 2019 - 2019 IEEE Global Communications Conference. IEEE, 2019. http://dx.doi.org/10.1109/globecom38437.2019.9014225.

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Cobb, William E., Eric W. Garcia, Michael A. Temple, Rusty O. Baldwin, and Yong C. Kim. "Physical layer identification of embedded devices using RF-DNA fingerprinting." In MILCOM 2010 - 2010 IEEE Military Communications Conference. IEEE, 2010. http://dx.doi.org/10.1109/milcom.2010.5680487.

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Chen, C. H. Winston, N. I. Taranenko, Y. F. Zhu, C. N. Chung, and S. L. Allman. "Laser mass spectrometry for DNA sequencing, disease diagnosis, and fingerprinting." In BiOS '97, Part of Photonics West, edited by Gerald E. Cohn and Steven A. Soper. SPIE, 1997. http://dx.doi.org/10.1117/12.274339.

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Reising, Donald R., Michael A. Temple, and Mark E. Oxley. "Gabor-based RF-DNA fingerprinting for classifying 802.16e WiMAX Mobile Subscribers." In 2012 International Conference on Computing, Networking and Communications (ICNC). IEEE, 2012. http://dx.doi.org/10.1109/iccnc.2012.6167534.

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Williams, McKay D., Michael A. Temple, and Donald R. Reising. "Augmenting Bit-Level Network Security Using Physical Layer RF-DNA Fingerprinting." In GLOBECOM 2010 - 2010 IEEE Global Communications Conference. IEEE, 2010. http://dx.doi.org/10.1109/glocom.2010.5683789.

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Reports on the topic "DNA fingerprinting of fungi"

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Echt, Craig, and Sedley Josserand. DNA fingerprinting sets for four southern pines. Asheville, NC: U.S. Department of Agriculture, Forest Service, Southern Research Station, 2018. http://dx.doi.org/10.2737/srs-rn-24.

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Echt, Craig, and Sedley Josserand. DNA fingerprinting sets for four southern pines. Asheville, NC: U.S. Department of Agriculture, Forest Service, Southern Research Station, 2018. http://dx.doi.org/10.2737/srs-rn-24.

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Gupta, Shweta. DNA Fingerprinting: A Major Tool for Crime Investigation. Spring Library, April 2021. http://dx.doi.org/10.47496/nl.blog.24.

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DNA profiling has revolutionized the criminal justice system over the past decades. It has even enabled the law enforcement from exonerating people who have been convicted wrongfully of crimes which they did not commit.
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Bischof, Laura. DNA fingerprinting analysis of captive Asian elephants, Elephas maximas. Portland State University Library, January 2000. http://dx.doi.org/10.15760/etd.5850.

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Winston Chen, C. H., N. I. Taranenko, Y. F. Zhu, C. N. Chung, and S. L. Allman. Laser mass spectrometry for DNA sequencing, disease diagnosis, and fingerprinting. Office of Scientific and Technical Information (OSTI), March 1997. http://dx.doi.org/10.2172/446348.

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