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Relevant bibliographies by topics / DNA. RNA

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Academic literature on the topic 'DNA. RNA'

Author: Grafiati

Published: 4 June 2021

Last updated: 1 February 2022

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Journal articles on the topic "DNA. RNA"

1

Arnott, Struther, R. Chandrasekaran, R. P. Millane, and H. S. Park. "RNA-RNA, DNA-DNA, and DNA-RNA Polymorphism." Biophysical Journal 49, no. 1 (January 1986): 3–5. http://dx.doi.org/10.1016/s0006-3495(86)83568-8.

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Urata, Hidehito, Hana Shimizu, and Masao Akagi. "Structural Studies of Heterochiral DNA/DNA, RNA/RNA, AND DNA/RNA Duplexes." Nucleosides, Nucleotides and Nucleic Acids 25, no. 4-6 (June 2006): 359–67. http://dx.doi.org/10.1080/15257770600683920.

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Afonin, Kirill A., Mathias Viard, Ioannis Kagiampakis, Christopher L. Case, Marina A. Dobrovolskaia, Jen Hofmann, Ashlee Vrzak, et al. "Triggering of RNA Interference with RNA–RNA, RNA–DNA, and DNA–RNA Nanoparticles." ACS Nano 9, no. 1 (December 18, 2014): 251–59. http://dx.doi.org/10.1021/nn504508s.

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Banfalvi, Gaspar. "Origin of Coding RNA from Random-Sequence RNA." DNA and Cell Biology 38, no. 3 (March 2019): 223–28. http://dx.doi.org/10.1089/dna.2018.4389.

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Fugmann, Sebastian D., and David G. Schatz. "RNA AIDs DNA." Nature Immunology 4, no. 5 (May 2003): 429–30. http://dx.doi.org/10.1038/ni0503-429.

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Steitz, Thomas A. "DNA- and RNA-dependent DNA polymerases." Current Opinion in Structural Biology 3, no. 1 (February 1993): 31–38. http://dx.doi.org/10.1016/0959-440x(93)90198-t.

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Malonga, Herman, Jean-Francois Neault, and Heidar-Ali Tajmir-Riahi. "Transfer RNA Binding to Human Serum Albumin: A Model for Protein–RNA Interaction." DNA and Cell Biology 25, no. 7 (July 2006): 393–98. http://dx.doi.org/10.1089/dna.2006.25.393.

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Melkonyan, Lena, Mathilde Bercy, Thierry Bizebard, and Ulrich Bockelmann. "Overstretching Double-Stranded RNA, Double-Stranded DNA, and RNA-DNA Duplexes." Biophysical Journal 117, no. 3 (August 2019): 509–19. http://dx.doi.org/10.1016/j.bpj.2019.07.003.

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Nafisi, Shohreh, Maryam Adelzadeh, Zeinab Norouzi, and Mohammad Nabi Sarbolouki. "Curcumin Binding to DNA and RNA." DNA and Cell Biology 28, no. 4 (April 2009): 201–8. http://dx.doi.org/10.1089/dna.2008.0840.

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Huang, Yuegao, and Irina M. Russu. "Dynamic and Energetic Signatures of Adenine Tracts in a rA-dT RNA-DNA Hybrid and in Homologous RNA-DNA, RNA-RNA, and DNA-DNA Double Helices." Biochemistry 56, no. 19 (May 2017): 2446–54. http://dx.doi.org/10.1021/acs.biochem.6b01122.

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Dissertations / Theses on the topic "DNA. RNA"

1

Buttner, M. "RNA polymerase - DNA interactions in Streptomyces." Thesis, University of Bristol, 1985. http://ethos.bl.uk/OrderDetails.do?uin=uk.bl.ethos.354445.

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Nandakumar, Jayakrishnan. "Discrimination of RNA versus DNA by an RNA ligase and distinct modes of substrate recognition by DNA ligases /." Access full-text from WCMC:, 2007. http://proquest.umi.com/pqdweb?did=1428838891&sid=13&Fmt=2&clientId=8424&RQT=309&VName=PQD.

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Antson, Dan-Oscar. "Genotyping RNA and DNA using padlock probes." Doctoral thesis, Uppsala : Acta Universitatis Upsaliensis : Univ.-bibl. [distributör], 2001. http://publications.uu.se/theses/91-554-5057-1/.

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Gilea, Manuela Aurora. "DNA and RNA synthesis in ionic liquids." Thesis, Queen's University Belfast, 2008. http://ethos.bl.uk/OrderDetails.do?uin=uk.bl.ethos.485198.

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The solid-phase synthesis of oligonucleotide derivatives such as phosphorothioates and phosphoroselenoates was investigated. Some ionic liquids containing the trlbexyl(tetradecyl)phosphonium cation and various anions proved to be very effective in dissolving the chalcogens (sulfur and , selenium) and to prepare oligonucleoside chalcogenophosphates. The suitability ofionic liquid-based chalcogen-transfer mixtures for the synthesis of oligonucleoside chalcogenophosphates on solid-phase was evaluated and subsequently the structure-activity relationship studied in detail. The compatibility of ionic liquid-based chalcogen-transfer mixtures with diverse types of solid supports e.g. controlled-pore glass, poly(vinylacetate) and. different synthetic methods. e.g. phosphoramidite and H-phosphonate method makes them useful as replacement of the more expensive and relatively unstable commerciaily avai1able chalcogen-transfer reagents. The distillation of ionic liquids was also studied.

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Zhu, Jian. "The stabilities of RNA and DNA structural elements." Diss., Georgia Institute of Technology, 1998. http://hdl.handle.net/1853/25194.

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Hill, G. R. "NMR studies of DNA and RNA binding proteins." Thesis, University of Cambridge, 2005. http://ethos.bl.uk/OrderDetails.do?uin=uk.bl.ethos.604060.

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HMG-D is a 112-residue, non-histone chromosomal protein from Drosophila melanogaster and is a member of the class of non-sequence specific HMGB proteins. The present project was based on the observation that other HMGB complexes that had been solved by NMR had a phenylalanine residue at a key interfacial location (corresponding to position 12 in HMG-D), whereas those like HMG-D that gave few intermolecular NOE cross peaks generally had a tyrosine at this location. This tyrosine was known to be involved in hydrogen-bonding to the DNA in a related complex that had been solved crystallographically. The Y12F mutant of full-length HMG-D was expressed and purified in isotope-labelled form suitable for NMR spectroscopy, and a set of multidimensional triple resonance experiments used to derive assignments for the backbond resonances of the protein both free and in complex with the dA₂bulge DNA. Sidechain assignments for the protein were obtained by a combination of “CCH”-transfer-based experiments and NOE spectra, while nearly complete assignments for the DNA in the complex were obtained from a combination of homonuclear 2D NOESY and TOCSY experiments together with filtered NOESY experiments where just cross peaks between protons both of which were not coupled to heteronuclei were selected. Filtered NOESY-based experiments were used to observe intermolecular NOE cross peaks in isolation, and, in contrast to the case of the wild-type complex, these experiments yielded around 50 intermolecular interactions. Together with an extensive set of assigned intramolecular NOE constraints, these formed the basis for a calculation of the structure of the complex starting from random conformations of both protein and DNA chains, which resulted in an NMR structure for the complex that had good precision over the structured region (residues 3-70 of the protein and stem 1 of the DNA).

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O'Hanlon, Karen Ann. "Studies on the enzyme DNA-dependent RNA polymerase." Thesis, University of Reading, 1998. http://ethos.bl.uk/OrderDetails.do?uin=uk.bl.ethos.266340.

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Pritchard, Hannah Louise. "Recognition agents for DNA and RNA quadruplex structures." Thesis, University of Birmingham, 2015. http://etheses.bham.ac.uk//id/eprint/5727/.

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The design and synthesis of a new class of G-quadruplex DNA recognition agents are discussed in this thesis along with their binding abilities to both duplex and G-quadruplex forming DNA. A selection of G-quadruplex binders reported in the literature to date have been reviewed and their interactions with the quadruplex DNA structure analysed. The biisoquinoline ligand used to incorporate into the metal complexes synthesised in this thesis was chosen because of its large aromatic surface area which is ideal for end stacking onto G-quartets. Both the palladium and platinum biisoquinoline complexes bind to quadruplex forming DNA, monitored by UV-vis and circular dichroism. The platinum complex has the most promising DNA binding results showing a selectivity for quadruplex DNA over duplex DNA when examined by gel electrophoresis. Biisoquinoline complex interactions with RNA G-quadruplexes have been investigated to make comparisons of that with DNA. The palladium complex binds less well to parallel quadruplex conformers suggesting its mode of interaction differs from that of the platinum complex. A toxicity assay against two cancer cell lines showed the platinum and palladium complexes to have IC\(_{50}\) values in the nM range. Modifications to the biisoquinoline structure were also attempted in order increase the specificity of the complex to G-quadruplexes by incorporating components that could interact with the quadruplex loops.

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Cramer, Janina. "Funktionelle Charakterisierung der RNA-abhängigen RNA-Polymerase des Hepatitis-C-Virus Untersuchung molekularer Mechanismen der Substratspezifität von DNA-abhängigen DNA-Polymerasen /." [S.l. : s.n.], 2004. http://deposit.ddb.de/cgi-bin/dokserv?idn=971700796.

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Daniel, Laurianne. "Human Ribosomal DNA and RNA Polymerase I Fate during UV-induced DNA Repair." Thesis, Lyon, 2017. http://www.theses.fr/2017LYSE1093/document.

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La réparation par excision de nucléotides (NER) garantit l'intégrité du génome lors de l'exposition aux rayons UV. Après irradiation aux UV, un des premiers problèmes rencontrés par la cellule est l'arrêt général de la transcription dû au blocage de l'ARN polymérase II (ARNP2) au niveau des lésions UV. Pour régler ce problème, le NER possède une voie de réparation spécifiquement couplée à la transcription (TCR). Les connaissances concernant le NER ont été obtenu via des études sur la transcription par l'ARNP2. Cependant, dans les cellules à fort métabolisme, plus de 60% de la transcription correspond à la transcription, dans le nucléole, de l'ADN ribosomique (ADNr) par l'ARN polymérase I (ARNP1). De nombreuses protéines sont absence du nucléole, c'est pourquoi certains processus nucléaires ne peuvent avoir lieu dans cette structure. Afin d ‘être répliqué et réparé, l'ADNr se déplace à la périphérie du nucléole. Malgré l'importance de la transcription par l'ARNP1, la réparation de l'ADNr a été peu étudiée chez l'homme. De plus, à notre connaissance, aucune étude ne s'est penchée sur le mécanisme moléculaire du déplacement de l'ADNr à la périphérie du nucléole. Notre étude démontre l'implication de la TCR dans la réparation de l'ADNr après lésions UV induites. De plus, nos recherches ont démontré que l'ARNP1 reste accrochée à l'ADNr et sont tous les deux délocalisés à la périphérie du nucléole après irradiation aux UV. Enfin, nous avons identifié l'actin et la moysine I nucléaires comme facteurs protéiques nécessaire à cette délocalisation
Nucleotide excision repair (NER) guarantees genome integrity and proper cellular functions against UV-induced DNA damage. After UV irradiation, one of the first burden cells have to cope with is a general transcriptional block caused by the stalling of RNA polymerase II (RNAP2) onto distorting UV lesions. To insure UV lesions repair specifically on transcribed genes, NER is coupled with transcription in an extremely organized pathway known as Transcription-Coupled Repair (TCR). Most of the knowledge about TCR has been gathered from RNAP2 transcription. However, in highly metabolic cells, more than 60% of total cellular transcription results from ribosomal DNA (rDNA) transcription, by the RNA polymerase I (RNAP1), which takes place in the nucleolus. Many nuclear proteins are excluded from the nucleolus and because of this some nucleolar processes cannot occur inside this structure. In order to be replicated and repaired rDNAs need to be displaced at the nucleolar periphery. Despite the importance of RNAP1 transcription, repair of the mammalian transcribed rDNA has been scarcely studied. Moreover, to the best of our knowledge no molecular mechanism has been proposed for rDNA displacement. Our study clearly demonstrated that the full TCR machinery is needed to repair UV-damaged rDNA and restart RNAP1 transcription. Our results show that UV lesions block RNAP1 transcription and that RNAP1 is firmly stalled onto rDNAs without being degraded. Our study also describes the displacement of the RNAP1/rDNA complex to the nucleolar periphery after UV irradiation and identifies both nuclear ß-actin and nuclear myosin I as factors required for this displacement

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Books on the topic "DNA. RNA"

1

DNA and RNA. New York: Rosen Pub., 2011.

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Erdmann, Volker A., Stefan Jurga, and Jan Barciszewski, eds. RNA and DNA Diagnostics. Cham: Springer International Publishing, 2015. http://dx.doi.org/10.1007/978-3-319-17305-4.

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Sinkovics, Joseph G. RNA/DNA and Cancer. Cham: Springer International Publishing, 2016. http://dx.doi.org/10.1007/978-3-319-22279-0.

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Aphasizhev, Ruslan, ed. RNA and DNA Editing. Totowa, NJ: Humana Press, 2011. http://dx.doi.org/10.1007/978-1-61779-018-8.

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Smith, Harold C., ed. RNA and DNA Editing. Hoboken, NJ, USA: John Wiley & Sons, Inc., 2008. http://dx.doi.org/10.1002/9780470262269.

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Witzany, Guenther. DNA habitats and their RNA inhabitants. Edited by New York Academy of Sciences. Hoboken, NJ: published on behalf of the New York Academy of Sciences by Wiley Subscription Services, Inc., 2015.

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Anders, Hans-Joachim, and Adriana Migliorini, eds. Innate DNA and RNA Recognition. New York, NY: Springer New York, 2014. http://dx.doi.org/10.1007/978-1-4939-0882-0.

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Harwood, Adrian J. Basic DNA and RNA Protocols. New Jersey: Humana Press, 1996. http://dx.doi.org/10.1385/089603402x.

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Steitz, Thomas A. Structural studies of protein-nucleic acid interaction: Thesources of sequence-specific binding. Cambridge: Cambridge University Press, 1993.

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Steitz, Thomas A. Structural studies of protein-nucleic acid interaction: The sources of sequence-specific binding. New York, NY, USA: Cambridge University Press, 1993.

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Book chapters on the topic "DNA. RNA"

1

Goddard, William A. "DNA-RNA." In Computational Materials, Chemistry, and Biochemistry: From Bold Initiatives to the Last Mile, 1325–30. Cham: Springer International Publishing, 2021. http://dx.doi.org/10.1007/978-3-030-18778-1_69.

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Piro, Benoît, Vincent Noël, and Steeve Reisberg. "DNA and PNA Probes for DNA Detection in Electroanalytical Systems." In RNA Technologies, 47–80. Cham: Springer International Publishing, 2015. http://dx.doi.org/10.1007/978-3-319-17305-4_3.

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Kular, Lara, and Maja Jagodic. "DNA Methylation in Multiple Sclerosis." In RNA Technologies, 181–214. Cham: Springer International Publishing, 2019. http://dx.doi.org/10.1007/978-3-030-14792-1_8.

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Arnemann, J. "DNA-/RNA-Konzentrationsbestimmung." In Lexikon der Medizinischen Laboratoriumsdiagnostik, 1. Berlin, Heidelberg: Springer Berlin Heidelberg, 2018. http://dx.doi.org/10.1007/978-3-662-49054-9_3464-1.

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Arnemann, J. "DNA-/RNA-Konzentrationsbestimmung." In Springer Reference Medizin, 719. Berlin, Heidelberg: Springer Berlin Heidelberg, 2019. http://dx.doi.org/10.1007/978-3-662-48986-4_3464.

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Noel, Vincent, Benoit Piro, and Steeve Reisberg. "DNA for Non-nucleic Acid Sensing." In RNA Technologies, 81–106. Cham: Springer International Publishing, 2015. http://dx.doi.org/10.1007/978-3-319-17305-4_4.

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Mundorf, Annakarina, and Nadja Freund. "Early Life Stress and DNA Methylation." In RNA Technologies, 215–27. Cham: Springer International Publishing, 2019. http://dx.doi.org/10.1007/978-3-030-14792-1_9.

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Landweber, Laura. "RNA based computing: Some examples from RNA catalysis and RNA editing." In DNA Based Computers II, 181–89. Providence, Rhode Island: American Mathematical Society, 1998. http://dx.doi.org/10.1090/dimacs/044/15.

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Rhodes, Daniela. "Telomeric DNA Recognition." In RNA Biochemistry and Biotechnology, 139–42. Dordrecht: Springer Netherlands, 1999. http://dx.doi.org/10.1007/978-94-011-4485-8_10.

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Rhodes, Daniela. "Protein-DNA Recognition." In RNA Biochemistry and Biotechnology, 123–26. Dordrecht: Springer Netherlands, 1999. http://dx.doi.org/10.1007/978-94-011-4485-8_8.

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Conference papers on the topic "DNA. RNA"

1

Engels, Joachim W., Thomas J. Lehmann, Jörg Parsch, and Thorsten Strube. "Fluorine substituted DNA and RNA." In XIIth Symposium on Chemistry of Nucleic Acid Components. Prague: Institute of Organic Chemistry and Biochemistry, Academy of Sciences of the Czech Republic, 2002. http://dx.doi.org/10.1135/css200205245.

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Galitsyna, Aleksandra, Anastasia Zharikova, Maria Logacheva, Sergey Razin, Andrey Mironov, and Alexey Gavrilov. "Large-scale analysis of RNA-DNA interactions." In 2018 IEEE International Conference on Bioinformatics and Biomedicine (BIBM). IEEE, 2018. http://dx.doi.org/10.1109/bibm.2018.8621137.

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Fang, Xiaohong, Sheldon Schuster, Xiaojing Liu, Tiffany Correll, Peng Zhang, Ruby Tapec, Swadeshmukul Santra, Monde Qhobosheanne, Jane H. Lou, and Weihong Tan. "Molecular beacon biosensors for DNA/RNA analysis." In BiOS 2000 The International Symposium on Biomedical Optics, edited by Patrick A. Limbach, John C. Owicki, Ramesh Raghavachari, and Weihong Tan. SPIE, 2000. http://dx.doi.org/10.1117/12.380499.

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Bielińska-Wa̧ż, D., P. Wa̧ż, W. Nowak, A. Nandy, S. C. Basak, Theodore E. Simos, and George Maroulis. "Similarity and Dissimilarity of DNA∕RNA Sequences." In COMPUTATIONAL METHODS IN SCIENCE AND ENGINEERING: Theory and Computation: Old Problems and New Challenges. Lectures Presented at the International Conference on Computational Methods in Science and Engineering 2007 (ICCMSE 2007): VOLUME 1. AIP, 2007. http://dx.doi.org/10.1063/1.2836064.

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Ochi, Anna, and Hiroyuki Hori. "Complex Formations between Artificial RNA-DNA Chimera Nucleic Acids and RNA Modification Enzyme." In 2007 International Symposium on Micro-NanoMechatronics and Human Science. IEEE, 2007. http://dx.doi.org/10.1109/mhs.2007.4420836.

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He, Chuan. "Reversible DNA and RNA methylation in biological regulation." In XVIth Symposium on Chemistry of Nucleic Acid Components. Prague: Institute of Organic Chemistry and Biochemistry, Academy of Sciences of the Czech Republic, 2014. http://dx.doi.org/10.1135/css201414052.

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Wagenknecht, Hans-Achim. "Postsynthetic labeling of DNA and RNA by fluorophores." In XVIth Symposium on Chemistry of Nucleic Acid Components. Prague: Institute of Organic Chemistry and Biochemistry, Academy of Sciences of the Czech Republic, 2014. http://dx.doi.org/10.1135/css201414190.

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Dunham, Margaret, Donya Quick, Yuhang Wang, Monnie McGee, and Jim Waddle. "Visualization of DNA/RNA Structure using Temporal CGRs." In Sixth IEEE Symposium on BioInformatics and BioEngineering (BIBE'06). IEEE, 2006. http://dx.doi.org/10.1109/bibe.2006.253331.

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Nookaew, Intawat. "Uncovering RNA and DNA Modifications from Native Sequences." In CSBio2020: The 11th International Conference on Computational Systems-Biology and Bioinformatics. New York, NY, USA: ACM, 2020. http://dx.doi.org/10.1145/3429210.3429232.

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Eikje, Natalja Skrebova. "DNA-RNA, DNA-DNA, DNA-protein and protein-protein interactions in diagnosis of skin cancers by FT-IR microspectroscopy." In SPIE BiOS. SPIE, 2011. http://dx.doi.org/10.1117/12.874692.

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Reports on the topic "DNA. RNA"

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Fang, Wenwen. RNA-Guided DNA Rearrangements in Breast Cancer. Fort Belvoir, VA: Defense Technical Information Center, September 2012. http://dx.doi.org/10.21236/ada574382.

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Dugan, L. Elucidation of the Mechanism of Gene Silencing using Small Interferin RNA: DNA Hybrid Molecules. Office of Scientific and Technical Information (OSTI), February 2006. http://dx.doi.org/10.2172/900164.

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Laurence, Jeffrey. Antibody to the RNA-Dependent DNA Polymerase of HTLV-III: Characterization and Clinical Associations. Fort Belvoir, VA: Defense Technical Information Center, March 1990. http://dx.doi.org/10.21236/ada231466.

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Laurence, Jeffrey. Antibody to the RNA-Dependent DNA Polymerase of HTLV-III: characterization and Clinical Associations. Fort Belvoir, VA: Defense Technical Information Center, July 1988. http://dx.doi.org/10.21236/ada227404.

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Laurence, Jeffrey. Antibody to the RNA-Dependent DNA Polymerase of HTLV-III: characterization and Clinical Associations. Fort Belvoir, VA: Defense Technical Information Center, December 1988. http://dx.doi.org/10.21236/ada227519.

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Hingerty, B. DUPLEX: A molecular mechanics program in torsion angle space for computing structures of DNA and RNA. Office of Scientific and Technical Information (OSTI), July 1992. http://dx.doi.org/10.2172/7250412.

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Hingerty, B. DUPLEX: A molecular mechanics program in torsion angle space for computing structures of DNA and RNA. Office of Scientific and Technical Information (OSTI), July 1992. http://dx.doi.org/10.2172/10179029.

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Research, Gratis. Vaccines Through History: Smallpox to COVID-19. Gratis Research, March 2021. http://dx.doi.org/10.47496/gr.blog.011.

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More recently, as genomes turned out to be promptly decodable, scientists have developed proficient knowledge at developing vaccines that depend on extraction of RNA or DNA from microbes and injecting these into the body.

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Hood-DeGrenier, Jennifer. Active Learning Workshops for Teaching Key Topics in Introductory Cell and Molecular Biology: Structure of DNA/RNA, Structure of Proteins, and Cell Division via Mitosis and Meiosis. Genetics Society of America Peer-Reviewed Education Portal (GSA PREP), December 2015. http://dx.doi.org/10.1534/gsaprep.2015.004.

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Bruice, Thomas C. DNG and RNG Phylogenetic Single Cell Probes. Fort Belvoir, VA: Defense Technical Information Center, February 1999. http://dx.doi.org/10.21236/ada360479.

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