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1

Kim, Hyun Woo, Sungsoo Yoon, Mokyoung Kim, Manseok Shin, Heenam Yoon, and Kidong Kim. "EcoBank: A flexible database platform for sharing ecological data." Biodiversity Data Journal 9 (February 17, 2021): e61866. https://doi.org/10.3897/BDJ.9.e61866.

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Environmental crisis challenges the human race harder than ever before. Ecologists have produced a massive amount of data to cope with the crisis. Accordingly, many national scale ecological database systems have been developed worldwide to manage and analyze these datasets. However, in Korea, ecological datasets produced by different research institutes for different purposes have not been integrated or serviced due to the lack of a well-designed information infrastructure. To address this obstacle, we present EcoBank (www.nie-ecobank.kr), an open, web-based ecological database platform desig
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Gajanayake, Achala J., Ruvishika S. Jayawardena, Feng-Ming Yu, et al. "An Online Database on Fungicolous Fungi: https://www.fungicolousfungi.org." Chiang Mai Journal of Science 52, no. 3 (2025): 1–8. https://doi.org/10.12982/cmjs.2025.026.

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Fungicolous fungi represent an ecologically and economically significant group of organisms, with potential applications in biological control and various industrial processes. Accurate identification and comprehensive investigation of the taxonomic diversity of fungicolous taxa are essential for understanding their ecological roles and harnessing their potential applications. Compiling the dispersed published information on fungicolous fungi provides a robust foundation for understanding their taxonomic diversity, improving identification accuracy, and ensuring proper documentation. This in t
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Yu, Ming Yang, Tong Guang Shi, and Fei Meng. "Construction of Ecological Environment Management Platform Based on Supermap IS.NET." Applied Mechanics and Materials 587-589 (July 2014): 772–75. http://dx.doi.org/10.4028/www.scientific.net/amm.587-589.772.

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This paper is based on development platform of Supermap IS.NET to discuss the overall structure, topological structure, function and database design and other aspects of eco-environment comprehensive management platform in Shandong Province according to some characteristics of eco-environment multi-elements composite system .for example ,when it comes to a wide range of massive information having strong temporal and spatial variation ,we need to make attention to summarize the issues in the process of design . System predicts and judges the trend of eco-environmental development by establishin
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Vissault, Steve, Dominique Gravel, and Timothée Poisot. "Mangal: An open infrastructure for ecological interactions." Biodiversity Information Science and Standards 3 (June 18, 2019): e37037. https://doi.org/10.3897/biss.3.37037.

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Interactions among species is at the heart of ecology. Despite their importance, studying ecological interactions remains difficult due to the lack of standard information and the disparity of formats in which ecological interactions are stored (Poisot et al. 2015). Historically, ecologists have used matrices to store interactions, which tend to easily decontextualize interactions from fieldwork when metadata is missing. To overcome these limitations, we designed Mangal - a global ecological interactions database - which serialize ecological interaction matrices into nodes (e.g. taxon, individ
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van Elden, Sean, Thomas Tothill, and Jessica J. Meeuwig. "Strategies for obtaining ecological data to enhance decommissioning assessments." APPEA Journal 60, no. 2 (2020): 559. http://dx.doi.org/10.1071/aj19235.

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Many offshore oil and gas platforms around the globe are reaching their end-of-life and will require decommissioning in the next few decades. Knowledge on the ecology of offshore platforms and their ecological role within a regional context in Australia is limited and the subsequent consequences of decommissioning remain poorly understood. Remotely operated vehicle (ROV) video is often collected during standard industry operations and may provide insight into the marine life associating with offshore platforms; however, the utility of this video for scientific purposes remains unclear. We prop
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Degen, Renate, and Sarah Faulwetter. "The Arctic Traits Database – a repository of Arctic benthic invertebrate traits." Earth System Science Data 11, no. 1 (2019): 301–22. http://dx.doi.org/10.5194/essd-11-301-2019.

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Abstract. The recently increased interest in marine trait-based studies highlights one general demand – the access to standardized, reference-based trait information. This demand holds especially true for polar regions, where the gathering of ecological information is still challenging. The Arctic Traits Database is a freely accessible online repository (https://doi.org/10.25365/phaidra.49; https://www.univie.ac.at/arctictraits, last access: 20 February 2019) that fulfils these requests for one important component of polar marine life, the Arctic benthic macroinvertebrates. It accounts for (1)
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Uzbekov, Umidkhon, Sadriddinov Bobur, Nuriddin Samatov, and Jurabek Tulaev. "Designing a Dynamic Digital Database for Long-Term Monitoring of the Aral Sea Bed Ecosystem Using Artificial Intelligence and Geo-Information Systems." American Journal of Biology and Natural Sciences 2, no. 7 (2025): 83–89. https://doi.org/10.51699/ajbns.v2i7.1206.

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This study presents the development of a centralized, dynamically updateable digital database designed to store, analyze, and visualize ecological information from the dried Aral Sea bed (Orolbo‘yi). The database integrates AI-based classification outputs, satellite image-derived indicators, field survey data, and geospatial attributes into a structured, relational platform. Developed in parallel with vegetation and habitat mapping efforts, the database enables systematic storage of species-specific data, environmental parameters, and spatial coordinates. Its functionality supports user-friend
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Xie, Yu Feng. "Hotspots of Ecological and Environmental Risk Research in China Based on Multidimensional Scaling Analysis and Cluster Analysis." Advanced Materials Research 807-809 (September 2013): 641–46. http://dx.doi.org/10.4028/www.scientific.net/amr.807-809.641.

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Taking the China Academic Journal Network Publishing Database as a platform, we constructed a co-word matrix with the high-frequency keywords of ecological/environmental risk related papers published on core journals. We made multidimensional scaling analysis and cluster analysis using SPSS, and discussed the status of ecological risk related research. The results show that the research hotspots can be divided into five aspects, including ecological risk assessment on heavy metals in the bottom mud, ecological risk assessment of toxic organic pollutants, regional landscape ecological risk, env
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Craven, Dylan, Tiffany Knight, Kasey Barton, et al. "OpenNahele: the open Hawaiian forest plot database." Biodiversity Data Journal 6 (September 27, 2018): e28406. https://doi.org/10.3897/BDJ.6.e28406.

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This data paper provides a description of OpenNahele, the open Hawaiian forest plot database. OpenNahele includes 530 forest plots across the Hawaiian archipelago containing 43,590 individuals of 185 native and alien tree, shrub and tree fern species across six islands. We include estimates of maximum plant size (D95<sub>0.1</sub> and D<sub>max3</sub>) for 58 woody plant species, a key functional trait associated with dispersal distance and competition for light. OpenNahele can serve as a platform to test key ecological, evolutionary and conservation questions in a hotspot archipelago. OpenNah
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Uhryn, Lesya, and Mariana Baran. "INFORMATION SYSTEM FOR RESEARCHING THE ECOLOGICAL STATE OF NATURE-RESERVED TERRITORIES." Measuring Equipment and Metrology 86, no. 2 (2025): 98–104. https://doi.org/10.23939/istcmtm2025.02.098.

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The article is dedicated to monitoring and researching the environmental condition of areas that have the status of nature-reserved. The work describes the creation of an information system with elements of artificial intelligence for studying the environmental condition of nature-reserved territories. As a result of the analysis of monitoring data, primary data for work was identified, and a database was formed. Special attention is paid to the description of the information model of the object and the indicators selected for its adequate functioning. The built-in artificial intelligence syst
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Varshanina, T. P., O. A. Plisenko, V. N. Korobkov, and Z. A. Shekhov. "Methodology of the Digital Platform of Smart Accurate Ecologically Balanced Agriculture of Adygea." New Technologies 17, no. 6 (2022): 124–33. http://dx.doi.org/10.47370/2072-0920-2021-17-6-124-133.

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The digital platform being developed is an information and mathematical model of the space of agricultural lands of Adygea, designed to solve an urgent problem of our time: automated visualization of the boundaries of spatial and temporal heterogeneity of crops and their habitat. For the first time, an automated computational model of the redistribution of agrochemical indicators in morphometrically classified quasi–homogeneous relief surfaces – geotopes in comparison with soil conditions, climatic and microclimatic fluctuations has been created. The tasks of the development include: providing
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Shelomentsev, Andrei G., Kseniya S. Goncharova, Artem A. Shelomentsev, and Aleksej S. Kruglikov. "Development of an integrated space-time database, characterizing an effects of climate change." Journal Of Applied Informatics 18, no. 1 (2023): 37–64. http://dx.doi.org/10.37791/2687-0649-2023-18-1-37-64.

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Currently, at the global and regional (national) levels, the expert community, as well as statesmen, have prioritized the task of practical implementation of the Sustainable Development Goals (characterizing the dynamics of a development of various parameters of socio-ecological and economic systems). Achieving these goals requires serious analytical work based on a deep and comprehensive analysis of a processes taking place in various spheres, as well as the formation of an appropriate information platform, including a set of databases that adequately describe changes taking place in various
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Hartini Sariyati, Nur, Hidayah Haris, Farah Farhana Ramli, et al. "Comparison of Metabarcoding Techniques for Dietary Assessment in Herbivores and Omnivores." BIO Web of Conferences 94 (2024): 01002. http://dx.doi.org/10.1051/bioconf/20249401002.

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Dietary assessment plays a crucial role in comprehending the ecological dynamics and nutritional needs of herbivores and omnivores. The metabarcoding technique has emerged as a potent tool for exploring the dietary composition of these animals. However, various metabarcoding techniques have been developed, each with its own advantages and limitations. This study aims to compare the performance of different metabarcoding techniques in herbivores and omnivores diet. We systematically reviewed 159 published manuscripts in Scopus and Google Scholar, and thematic analysis was conducted across sever
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Ding, Ling, and Yezhang Liang. "Cloud Computing and Internet of Things in the Evaluation of Ecological Environment Quality in Rural Tourist Areas in Smart Cities." Mobile Information Systems 2021 (August 27, 2021): 1–11. http://dx.doi.org/10.1155/2021/6295568.

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With the increase of tourist environment, the real-time monitoring of ecological environment has become a concern. This study mainly discusses the application of cloud computing and Internet of things in the evaluation of ecological environment quality of rural tourism areas in a smart city. In this study, the real-time monitoring of the atmosphere, water, and meteorological data is collected through the GPRS data transmission module and then sent back to the local server by the GPRS network, and the obtained non-real-time and real-time data are used to establish the ecological monitoring data
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Le, Minh Tuan, and Natalia Bakaeva. "A Technique for Generating Preliminary Satellite Data to Evaluate SUHI Using Cloud Computing: A Case Study in Moscow, Russia." Remote Sensing 15, no. 13 (2023): 3294. http://dx.doi.org/10.3390/rs15133294.

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The expansion of construction zones, transportation, and utilities for industry and high-tech areas due to human activities has caused the deterioration of the natural ecological environment. As cities face problems related to the surface urban heat island (SUHI) effect and environmental pollution, there is an urgent need to develop new methods for the ecological–microclimatic assessment and structural–functional planning of urban areas. The main goal of this study was to demonstrate the evolution of the surface urban heat island (SUHI) effect in Moscow over a long period and to determine the
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Wu, Miao, and Ang Chen. "Practice on ecological flow and adaptive management of hydropower engineering projects in China from 2001 to 2015." Water Policy 20, no. 2 (2017): 336–54. http://dx.doi.org/10.2166/wp.2017.138.

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Abstract In this study, 96 Environmental Impact Assessment (EIA) reports of hydropower projects from 2001 to 2015 have been collected, and four parts of the contents including the project status, hydrological characteristics, downstream fish status and ecological flow have been analyzed by statistical methods. Thus, we built the ecological flow database of hydropower projects in China, and analyzed the differences of ecological flow release before and after the implementation of the 2006 guideline, based on spatial and temporal characteristics analysis in ArcGIS platform. We also analyzed diff
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Huang, Jia Rong, Dong Feng Yan, Fang Guo, and Xiao Xu He. "Reforming Instruction of Forestry Specialty with Information Technology." Advanced Materials Research 271-273 (July 2011): 1463–67. http://dx.doi.org/10.4028/www.scientific.net/amr.271-273.1463.

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Forestry informationization is an important part of Forestry ecological construction, which needs a large number of high-level mastery of information technology expertise of forestry specialty, so exploration of effective way to integrate instruction of forestry specialty and information technology is the important task of teaching reforms. This paper describes the basic objectives of forestry specialty training and the importance and necessity of the integration of information technology and forestry specialty, and detailed objectives and integration method. The integration methods are to est
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18

Mamedov, G. "Compilation of interactive electronic soil maps and maps of ecological assessment of soils of Azerbaijan on the basis of geographic information systems." Bulletin of Science and Practice 5, no. 3 (2019): 118–27. https://doi.org/10.33619/2414-2948/40/15.

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On the basis of the GIS software, an electronic map platform has been created covering the entire territory of the Republic of Azerbaijan, which supports an interactive update mode. This map covers the entire scale of the spectrum and meets the requirements of e-agriculture and other public information systems, which are based on the use of data space. For conducting soil, agrochemical and interdisciplinary research on the platform, a method of plastic relief was developed. A detailed methodology for compiling digital soil and ecological soil assessment maps using 3D visualization has also bee
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Izakovicova, Zita, Andrej Raniak, Jana Špulerová, and Milena Moyzeová. "Assessment of geo-ecosystem changes at LTSER Trnava platform." ARPHA Conference Abstracts 8 (May 28, 2025): e150271. https://doi.org/10.3897/aca.8.e150271.

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Long-term socio-ecological research platform LTSER Trnava was founded in 1985. Since then, long-term ecosystem research has been underway at the site. It is located in the south-west Slovakia, in the territory of Trnava and 44 rural municipalities with a total area of 741.33 km2. The territory has 132,524 inhabitants and a density is 179 inhabitants per km2. The main part of the LTSER (central and southern parts) is located in the Danubian Lowland. The soils quality (chernozem and floodplain soils), with favourable climate conditions, create there a high potential for agricultural development.
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Yan, Yueyang, Zhangpeng Shi, Cunmin Wang, Zi Jin, Jigang Yin, and Guan Zhu. "Viral Diversity and Ecological Impact of DNA Viruses in Dominant Tick Species in China." Microorganisms 12, no. 8 (2024): 1736. http://dx.doi.org/10.3390/microorganisms12081736.

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Ticks are blood-feeding ectoparasites that also transmit various pathogens, posing severe risks to human and animal health. DNA viruses play a crucial role in the microbial ecology of ticks, but their distribution and ecological significance remain largely undetermined. Here, we assembled an extensive catalog encompassing 4320 viral operational taxonomic units (vOTUs) from six main dominant tick species in China, of which 94.8% have not been found in any other environment. To bridge the knowledge gap in tick DNA virus research and provide a crucial resource platform, we developed the Tick DNA
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Zhang, C., and C. Fang. "THE METHOD OF MULTIPLE SPATIAL PLANNING BASIC MAP." ISPRS - International Archives of the Photogrammetry, Remote Sensing and Spatial Information Sciences XLII-3 (April 30, 2018): 2245–49. http://dx.doi.org/10.5194/isprs-archives-xlii-3-2245-2018.

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The “Provincial Space Plan Pilot Program” issued in December 2016 pointed out that the existing space management and control information management platforms of various departments were integrated, and a spatial planning information management platform was established to integrate basic data, target indicators, space coordinates, and technical specifications. The planning and preparation will provide supportive decision support, digital monitoring and evaluation of the implementation of the plan, implementation of various types of investment projects and space management and control department
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He, Xinyu, Meng Xie, Lan Wang, Liangjun Yu, Fengjuan Li, and Hong Ma. "Integrated Transcriptomic and Physiological Analysis Reveals the Drought Adaptation Strategies of Sapindus delavayi, an Important Tree for Industrial Use in the Dry–Hot Valleys." Horticulturae 11, no. 6 (2025): 603. https://doi.org/10.3390/horticulturae11060603.

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Sapindus delavayi is a drought-resistant tree species endemic to the dry–hot valleys of Southwestern China and is of great significance for soil and water conservation and ecological restoration. In this study, we sequenced the transcriptome of its leaves using the Illumina HiSeq 4000 platform and obtained 96.12 Gb of high-quality data (Q20 = 98.68%, Q30 = 95.62%), which were de novo assembled to obtain 89,228 unigenes (N50 = 1538 bp), of which 63,005 (70.61%) were successfully annotated to at least one database (NR, NT, SwissProt, KOG, KEGG, GO, Pfam). Overall, 53.96% of the unigenes in the S
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Wang, Zhe. "Development of ecological management system for planted forest based on ELM deep learning algorithm." 3C Empresa. Investigación y pensamiento crítico 12, no. 01 (2023): 165–84. http://dx.doi.org/10.17993/3cemp.2023.120151.165-184.

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Plantations play a central and lever role in maintaining the ecological balance of the earth, maintaining the overall function of the terrestrial ecosystem, and promoting the coordinated development of economic society and ecological construction. In order to strengthen the ecological management of plantation forests and improve the ecological level of forest region, the C/S framework is taken as the basic structure, and the programming mode of business model-user interface controller is used, on J2EE platform. The ecological management system of a planted forest is constructed by the evaluati
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Xie, Yu Feng, and Peng Du. "Research Hotspots of Water Transfer Project in China Based on Multidimensional Scaling Analysis and Cluster Analysis." Applied Mechanics and Materials 409-410 (September 2013): 298–303. http://dx.doi.org/10.4028/www.scientific.net/amm.409-410.298.

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China National Knowledge Infrastructure database (CNKI) is used as the platform to analyze the keywords of water transfer project related papers published on core journals during the past 20 years. After using the softwares Ucinet and SPSS to make co-word analysis including multidimensional scaling analysis and cluster analysis, the research hotspots of water transfer are discussed. Results are found that research hotspots can be divided into four aspects, including water environment simulation on major water transfer project, planning and water resource impact of inter-basin water transfer pr
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Ma, Lejun, Xingnan Zhang, Huan Wang, and Changjun Qi. "Characteristics and Practices of Ecological Flow in Rivers with Flow Reductions Due to Water Storage and Hydropower Projects in China." Water 10, no. 8 (2018): 1091. http://dx.doi.org/10.3390/w10081091.

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Water and flow reductions in the channels downstream of water storage and hydropower projects have significant impacts on aquatic ecosystems. Understanding and analyzing the ecosystem status is of great significance to facilitate the protection of riverine ecosystems. A database was established based on the 2000–2017 environmental impact assessment (EIA) reports on water storage and hydropower projects in China, and corresponding analysis software was built based on an ArcGIS spatial analysis platform. The projects in China are mainly found in the Yangtze and Pearl River basins and in south-we
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Monieta, Jan, and Adrian Sendecki. "Database and Knowledge about Essential Manufacturers of Marine Self-Ignition Engines." Journal of Marine Science and Engineering 8, no. 4 (2020): 239. http://dx.doi.org/10.3390/jmse8040239.

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During scientificstudies on reciprocating self-ignition marine engines, varying data are often needed. Such data are often in various collections and obtaining some of these is very difficult. Therefore, as it was elaborated in the electronic database about the important marine reciprocating combustion engine producers for the needs of operating scientific investigations aiming at gathering the essential information and technical data in one set. This article also presents a reference to existing databases. Important and globally known companies, as well as their constant and variable data, we
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Cvejić, Milijana, Marko Joksimović, Jelena Tomićević-Dubljević, Ljubinko Rakonjac, Milan Medarević, and Vladimir Malinić. "Ecological Evaluation of the Sustainability of City Forests." Forests 14, no. 4 (2023): 700. http://dx.doi.org/10.3390/f14040700.

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The Košutnjak forest in the city of Belgrade, Serbia, with an area of 259 ha, provides ecological and social benefits to its inhabitants, but its composition has changed in the last 20 years: forest areas have decreased, people have become irresponsible towards the forest and forest soil, and forest degradation is evident. The question is whether the forest has the potential to regenerate and survive. The horizontal assessment of attributes was carried out using data from the official forest database of the administrative unit “Košutnjak (2007–2016)”, which, in conjunction with the basic fores
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Arazy, Ofer, Keren Kaplan-Mintz, Dan Malkinson, and Yiftach Nagar. "A local community on a global collective intelligence platform: A case study of individual preferences and collective bias in ecological citizen science." PLOS ONE 19, no. 8 (2024): e0308552. http://dx.doi.org/10.1371/journal.pone.0308552.

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The collective intelligence of crowds could potentially be harnessed to address global challenges, such as biodiversity loss and species’ extinction. For wisdom to emerge from the crowd, certain conditions are required. Importantly, the crowd should be diverse and people’s contributions should be independent of one another. Here we investigate a global citizen-science platform—iNaturalist—on which citizens report on wildlife observations, collectively producing maps of species’ spatiotemporal distribution. The organization of global platforms such as iNaturalist around local projects compromis
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DJAMALUDDIN, IBRAHIM, POPPY INDRAYANI, YASUHIRO MITANI, SHUICHIRO TAGANE, and TETSUKAZU YAHARA. "GEOGRAPHIC INFORMATION SYSTEM (GIS) WEB SERVER FOR BIODIVERSITY INFORMATION SYSTEM." REINWARDTIA 14, no. 2 (2016): 249. http://dx.doi.org/10.14203/reinwardtia.v14i2.1668.

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DJAMALUDDIN, I., INDRAYANI, P., MITANI, Y., TAGANE, S. &amp; YAHARA, T. 2015. Geographic Information System (GIS) web server for biodiversity information system. Reinwardtia 14 (2): 249 - 258. - Ecological protection strategies, designed by sharing information and integrating data, play an important role in defining interconnections and interdependencies in research as well as in increasing global awareness. The Geographic Information System (GIS) web server is one technology solution to improve the interoperability and sharing between the biodiversity databases of an organization and the data
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Achasov, A. B., О. Yu Seliverstov, A. G. Kot, A. A. Кlieshch, and D. О. Melnyk. "To the question of creating an open ecological geographic information system." Man and Environment. Issues of Neoecology, no. 38 (November 25, 2022): 97–105. http://dx.doi.org/10.26565/1992-4224-2022-38-09.

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Access to information about the state of the environment is an inalienable right of Ukrainian citizens, so the development and improvement of ways to provide information to the population with environmental data is of high social importance. A valuable source of reliable environmental data that can be used to inform the public are the results of scientific research on the state of the environment, which are produced by the activities of higher education institutions. This article considers the possibilities of using web-GIS services by higher education institutions as a means of communicating
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Sandmann, Dorothee, Stefan Scheu, and Anton Potapov. "Ecotaxonomy: Linking taxa with traits and integrating taxonomical and ecological research." Biodiversity Information Science and Standards 3 (June 13, 2019): e37146. https://doi.org/10.3897/biss.3.37146.

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Ecological roles of underexplored groups, such as tropical invertebrates, can be inferred from their functional traits, such as body mass, dispersal ability, reproductive mode and feeding habits. Despite a strong need, a common database for invertebrate traits is yet to be created. Traits are defined as a property of individual organisms, however many parameters are similar in groups of organisms, i.e., in species or even at higher taxonomic levels. Such parameters may be attributed to taxa instead of individuals. Linking both facilitates ecological and conservation studies based on taxa or ph
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Ning, Li, Yan Xue, Cheng JinXing, and Sun YingZe. "Design of Visual Platform for Fisheries and Aquaculture Production Based on Geographic Information System Technologies." E3S Web of Conferences 189 (2020): 02020. http://dx.doi.org/10.1051/e3sconf/202018902020.

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With the deterioration of ecological environment and the increasing demand for aquatic products, the development of fishing remains seriously threatened from various aspects, especially for production planning and control in particular place and time. Therefore, this technical paper develops a visual platform based on Geographic Information System (GIS) aim to help managers formulate sensible policy with the intention of achieving sustainable fisheries development. The key design of this system lies in the association of attribute database and GIS technologies referring to the Leftlet map. The
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Brosens, Dimitri, Francois Vankerkhoven, David Ignace, et al. "FORMIDABEL: The Belgian Ants Database." ZooKeys 306 (June 3, 2013): 59–70. https://doi.org/10.3897/zookeys.306.4898.

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FORMIDABEL is a database of Belgian Ants containing more than 27.000 occurrence records. These records originate from collections, field sampling and literature. The database gives information on 76 native and 9 introduced ant species found in Belgium. The collection records originated mainly from the ants collection in Royal Belgian Institute of Natural Sciences (RBINS), the ‘Gaspar’ Ants collection in Gembloux and the zoological collection of the University of Liège (ULG). The oldest occurrences date back from May 1866, the most recent refer to August 2012. FORMIDABEL is a work in progress a
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Lee, Ji-Hyun, Hyoung Sul La, Jeong-Hoon Kim, et al. "Application of Dual Metabarcoding Platforms for the Meso- and Macrozooplankton Taxa in the Ross Sea." Genes 13, no. 5 (2022): 922. http://dx.doi.org/10.3390/genes13050922.

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Meso- and macrozooplankton play crucial roles in the trophic web and the biological carbon pump in the ocean by transferring energy from lower to higher trophic levels and vertically exporting carbon from the surface to the deep ocean and seabed. In this study, zooplankton community structures in the Ross Sea, Antarctica, were analyzed using metabarcoding methods. Both regular barcode (RB) (using a PacBio Sequel system) and mini barcode (MB) (using the Illumina MiSeq platform) methods were utilized. As the result of a combination of the two bioinformatic pipelines used in the RB, 55 reliable h
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Potapov, Anton, Dorothee Sandmann, and Stefan Scheu. "Ecotaxonomy: Linking traits, taxa, individuals and samples in a flexible virtual research environment for ecological studies." Biodiversity Information Science and Standards 3 (June 18, 2019): e37166. https://doi.org/10.3897/biss.3.37166.

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Major research progress in ecology is being achieved through large-scale collaborations across people, groups and countries. In large-scale projects harmonization of data is tedious and time-consuming, but needs to be done reliably and rapidly. This is especially true if projects investigate under-explored organism groups such as tropical invertebrates. To link taxa to their role in ecosystems, functional traits of the taxa need to be considered. However, despite the urgent need for a common database for invertebrate traits, this is yet to be established. We developed an open web platform, Eco
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Su, Qixuan, Xuan Zhang, Jing Li, et al. "PPDP: A Data Portal of Paris polyphylla for Polyphyllin Biosynthesis and Germplasm Resource Exploration." Diversity 14, no. 12 (2022): 1057. http://dx.doi.org/10.3390/d14121057.

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Paris polyphylla Smith is a perennial medicinal herb with records from around 2000 years ago. Polyphyllins are the main bioactive compounds of this herb, which are found to have remarkable effects on bacteriostatic, antiphlogistic, sedative, and antitumor. However, the market demand for P. polyphylla is sharply increasing, and the wild resources are threatened by plundering exploitation. Integrating molecular data of P. polyphylla can benefit the sustainable resource exploitation. Here, we constructed PPDP (Paris polyphylla Data Portal) to provide a data platform for polyphyllin biosynthesis a
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Liu, Heng, Xinyu Liu, Lufeng Nie, Xiaochun Hong, and Xiang Ji. "Research Progress of Urban Wind and Thermal Environment Based on CiteSpace and China National Knowledge Infrastructure Database." Sustainability 14, no. 20 (2022): 13108. http://dx.doi.org/10.3390/su142013108.

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The urban wind–thermal environment affects the sustainable development of the urban ecological environment. In recent years, China has frequently suffered from storms, hurricanes, floods, and other disasters that damage the urban ecology. The urban wind and thermal environment involves many components; therefore, it is necessary to systematically review the current research progress in China. This paper uses CiteSpace software to analyze researchers, institutions, keywords, and research hotspots. By summarizing the knowledge structure, temporal and spatial distribution, evolution trends, and f
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Luglio, Sofia Matilde, Ginevra Bucalossi, Riccardo Lisci, et al. "A Biodiversity Monitoring Case Study in Viticulture: Manual and Digitalized Collaborative Methodology to Pursue the European Commission’s Sustainable Challenges." Sustainability 16, no. 8 (2024): 3469. http://dx.doi.org/10.3390/su16083469.

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The European Commission (EC) promotes policies addressing the needs of a growing human population while adhering to ecological principles that ensure ecosystem sustainability. Viticulture, one of the most widespread cultivations in the world, is, at the same time, one of the most environmentally impactful cultivations. Many studies have been conducted worldwide to identify more sustainable practices because vine monoculture, when repeated for long periods in the same territory, combined with low attention to the agronomic balance of vineyards, is causing biodiversity loss. The study aims to im
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Fedonyuk, T. P., O. M. Galushchenko, T. V. Melnichuk, et al. "Prospects and main aspects of the GIS-technologies application for monitoring of biodiversity (on the example of the Chornobyl Radiation-Ecological Biosphere Reserve)." Kosmìčna nauka ì tehnologìâ 26, no. 6 (2020): 75–93. http://dx.doi.org/10.15407/knit2020.06.075.

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We developed the conceptual model of the use of GIS technologies in the activity of natural reserve fund objects on the example of the Chornobyl Radiation-Ecological Biosphere Reserve. The GIS technologies is highly demanded due to the large area of the object, the complexity of the technogenic environment (radiation pollution), and the lack of a single database for the years preceding the creation of the Reserve. Therefore, the creation of the Reserve's geoportal is an important prerequisite for integrated dynamic monitoring of the environment and biodiversity. The functional diagram of the f
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Peng, Zhijun, Jingqiang Guan, Dan Mou, et al. "Analysis of Bacterial Community Composition and Ecological Function during Soft Rot Process in Pitaya (Hylocereus spp.) Stems." Journal of Chemistry 2022 (May 6, 2022): 1–8. http://dx.doi.org/10.1155/2022/9169433.

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The soft rot in pitaya (Hylocereus spp.) stems seriously affected the harvest of pitaya fruits, but the dynamic change characteristics of bacterial community in pitaya stems during soft rot stages had not been revealed. In this study, we analyzed the bacterial community composition of different soft rot stages and visualized functional annotations of the core bacterial community in five soft rot periods via the Illumina high-throughput sequencing technology, MetaCoMET online network platform, and FAPROTAX database. The results showed that the dominant bacteria in healthy and diseased pitaya st
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Udayraj, Swati, Senan D'Souza, S. Aravind P, and Nandini Rajamani. "Building a Database using Unconventional Sources: Squirrels of India." Biodiversity Information Science and Standards 6 (September 7, 2022): e94039. https://doi.org/10.3897/biss.6.94039.

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Squirrels, like most other small mammals, have been poorly documented in the Indian subcontinent, which deters us from understanding species declines and prioritizing research on sensitive taxa (McKinney 1999, Koprowski and Nandini 2008). They are diverse in their habits and morphology and perform important ecological roles, including seed dispersal, pollination, and regulating plant growth. They also form a significant prey base for many predators. Squirrels respond strongly to pressures around them, including urbanization, habitat modification, and climate change, and can thus act as model s
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Song, Yingqiang, Yinxue Pan, Meiyan Xiang, et al. "A WebGIS-Based System for Supporting Saline-Alkali Soil Ecological Monitoring: A Case Study in Yellow River Delta, China." Remote Sensing 16, no. 11 (2024): 1948. http://dx.doi.org/10.3390/rs16111948.

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The monitoring and evaluation of soil ecological environment is very important to ensure the saline-alkali soil health and the safety of agricultural products. It is of foremost importance to, within a regional ecological risk-reduction strategy, develop a useful online system for soil ecological assessment and prediction to prevent people from suffering the threat of sudden disasters. However, the traditional manual or empirical parameter adjustment causes the mismatch of the hyperparameters of the model, which cannot meet the urgent needs of high-performance prediction of soil properties usi
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Yang, Qing, Fanyue Sun, Zhi Yang, and Hongjun Li. "Comprehensive Transcriptome Study to Develop Molecular Resources of the CopepodCalanus sinicusfor Their Potential Ecological Applications." BioMed Research International 2014 (2014): 1–12. http://dx.doi.org/10.1155/2014/493825.

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Calanus sinicusBrodsky (Copepoda, Crustacea) is a dominant zooplanktonic species widely distributed in the margin seas of the Northwest Pacific Ocean. In this study, we utilized an RNA-Seq-based approach to develop molecular resources forC. sinicus. Adult samples were sequenced using the Illumina HiSeq 2000 platform. The sequencing data generated 69,751 contigs from 58.9 million filtered reads. The assembled contigs had an average length of 928.8 bp. Gene annotation allowed the identification of 43,417 unigene hits against the NCBI database. Gene ontology (GO) and KEGG pathway mapping analysis
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Parsons, Arielle Waldstein, Christine Goforth, Robert Costello, and Roland Kays. "The value of citizen science for ecological monitoring of mammals." PeerJ 6 (March 29, 2018): e4536. http://dx.doi.org/10.7717/peerj.4536.

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Citizen science approaches are of great interest for their potential to efficiently and sustainably monitor wildlife populations on both public and private lands. Here we present two studies that worked with volunteers to set camera traps for ecological surveys. The photographs recorded by these citizen scientists were archived and verified using the eMammal software platform, providing a professional grade, vouchered database of biodiversity records. Motivated by managers’ concern with perceived high bear activity, our first example enlisted the help of homeowners in a short-term study to com
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Badillo Alemán, Maribel, Ariana Solís Gómez, Alfredo Gallardo Torres, Eduardo Pacheco Gongora, and Xavier Chiappa-Carrara. "Diversity of fish otoliths from the Gulf of Mexico and the Caribbean Sea: Report on the first digital collection of fish otoliths (Actinopterygii) from the Atlantic region of Mexico." Acta Ichthyologica et Piscatoria 54 (October 28, 2024): 249–60. http://dx.doi.org/10.3897/aiep.54.134294.

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The Otolith Collection of Fishes from the Gulf of Mexico and Caribbean Sea was created with the objective to conserve and illustrate the diversity of these structures from species living in the Gulf of Mexico, the Caribbean Sea, and the freshwater and brackish systems of the Yucatan Peninsula, incorporating morphological descriptions and morphometric data. Otoliths, non-skeletal calcareous structures that develop in the inner ear of fish, are essential for balance and hearing. They have become pivotal tools for age and growth determination, population analysis, and ecological, trophic, and arc
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Chupikova, Svetlana A., and Anatoly F. Chuldum. "Geoinformation and remote methods for assessing snow cover pollution (Kyzyl)." Geoinformatika, no. 1 (March 27, 2023): 63–70. http://dx.doi.org/10.47148/1609-364x-2023-1-63-70.

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The article presents the results of the use of geoinformation systems (GIS) and Earth remote sensing (ERS) in the mapping and analysis of snow pollution in urban areas. The research was carried out on the basis of the generated database. The use of geoinformation systems tools allows to create electronic maps to assess the current ecological state of the territory, and the use of ERS data helps to simplify the assessment of pollution levels. Thematic maps have been constructed in the geoinformation environment: the level of lead pollution (mg/kg) (m2 *day) by year, the density of atmospheric d
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Chupikova, Svetlana A., and Anatoly F. Chuldum. "Geoinformation and remote methods for assessing snow cover pollution (Kyzyl)." Geoinformatika, no. 1 (March 27, 2023): 63–70. http://dx.doi.org/10.47148/1609-364x-2022-1-63-70.

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The article presents the results of the use of geoinformation systems (GIS) and Earth remote sensing (ERS) in the mapping and analysis of snow pollution in urban areas. The research was carried out on the basis of the generated database. The use of geoinformation systems tools allows to create electronic maps to assess the current ecological state of the territory, and the use of ERS data helps to simplify the assessment of pollution levels. Thematic maps have been constructed in the geoinformation environment: the level of lead pollution (mg/kg) (m2 *day) by year, the density of atmospheric d
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Meyke, Evgeniy. "When Data Management Meets Project Management." Biodiversity Information Science and Standards 3 (June 19, 2019): e37224. https://doi.org/10.3897/biss.3.37224.

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Complex projects that collect, curate and analyse biodiversity data are often presented with the challenge of accommodating diverse data types, various curation and output workflows, and evolving project logistics that require rapid changes in the applications and data structures. At the same time, sustainability concerns and maintenance overheads pose a risk to the long term viability of such projects. We advocate the use of flexible, multiplatform tools that adapt to operational, day-to-day challenges while providing a robust, cost efficient, and maintainable framework that serves the needs
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Journal, IJSREM. "Tree Plantation Management in Agriculture Sector." INTERANTIONAL JOURNAL OF SCIENTIFIC RESEARCH IN ENGINEERING AND MANAGEMENT 08, no. 01 (2024): 1–13. http://dx.doi.org/10.55041/ijsrem27919.

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Mahogany stands as a valuable hardwood species with significant ecological and commercial importance. The Mahogany Agro Management system aims to streamline agricultural processes through an integrated platform. This project endeavors to address the imperative for advanced Agro-management practices through the development of an Android app integrated with satellite technology. The app accommodates diverse user roles, ranging from Super Admins to Farmers, and incorporates essential CRUD functionalities. Our primary objectives include optimizing Mahogany tree growth conditions, leveraging real-t
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Kulakova, Ekaterina S., and Asel M. Batyrkaeva. "DEVELOPMENT OF THE SYSTEM OF ECOLOGICAL MONITORING OF THE ATMOSPHERE USING NEURAL NETWORK CAPABILITIES." Electrical and data processing facilities and systems 20, no. 2 (2024): 115–22. http://dx.doi.org/10.17122/1999-5458-2024-20-2-115-122.

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Relevance The work is a description of the development of a system of environmental monitoring of the atmosphere with the possibility of using an artificial neural network to make predictions of concentrations of substances at different altitudes. The study considers the basic principles of neural networks functioning and their integration into the environmental monitoring system. Aim of research Aim of research is to consider the creation of a system for controlling the state of the atmosphere using the predictive capabilities of a neural network. The study will consider what problems can be
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