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Journal articles on the topic 'Escherichia Identification'

Author: Grafiati

Published: 4 June 2021

Last updated: 5 February 2022

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1

Parin, U., S. Kirkan, SS Arslan, and HT Yuksel. "Molecular identification and antimicrobial resistence of Escherichia fergusonii and Escherichia coli from dairy cattle with diarrhoea." Veterinární Medicína 63, No. 3 (March 28, 2018): 110–16. http://dx.doi.org/10.17221/156/2017-vetmed.

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The aim of this study was to determine the incidence of Escherichia fergusonii in dairy cattle with clinical signs of diarrhoea. The specimens were obtained from three different farms in Denizli province of Turkey, between August 2016 and December 2016. Rectal contents of 57 Holstein-friesian dairy cattle with diarrhoea were collected from farms located in the Aegean Region (Denizli province, Turkey). Rectal swabs were inoculated into enrichment, differential and selective culture media. A total of 49 (86%) Escherichia spp. were isolated by phenotypic identification from 57 rectal swab samples

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2

Hachim Mohammed, Husham, Mohammed Flayyih Tareef, and Ali Kamal Mohammed. "Molecular Identification of Isolate from Escherichia coli Isolates from Dialysis Patients." Journal of Pure and Applied Microbiology 12, no. 4 (December 30, 2018): 2087–94. http://dx.doi.org/10.22207/jpam.12.4.45.

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3

Freestone, P., S. Grant, I. Toth, and V. Norris. "Identification of phosphoproteins in Escherichia coli." Molecular Microbiology 15, no. 3 (February 1995): 573–80. http://dx.doi.org/10.1111/j.1365-2958.1995.tb02270.x.

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4

Lindsey, Rebecca L., L. Garcia-Toledo, D. Fasulo, L. M. Gladney, and N. Strockbine. "Multiplex polymerase chain reaction for identification of Escherichia coli , Escherichia albertii and Escherichia fergusonii." Journal of Microbiological Methods 140 (September 2017): 1–4. http://dx.doi.org/10.1016/j.mimet.2017.06.005.

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5

York, Mary K., Ellen Jo Baron, Jill E. Clarridge, Richard B. Thomson, and Melvin P. Weinstein. "Multilaboratory Validation of Rapid Spot Tests for Identification of Escherichia coli." Journal of Clinical Microbiology 38, no. 9 (2000): 3394–98. http://dx.doi.org/10.1128/jcm.38.9.3394-3398.2000.

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To validate the accuracy of rapid tests for identification ofEscherichia coli, five laboratories sequentially collected 1,064 fresh, clinically significant strains with core criteria of indole-positive, oxidase-negative, nonspreading organisms on sheep blood agar plates (BAP), having typical gram-negative rod plate morphology, defined as good growth on gram-negative rod-selective media. An algorithm using beta-hemolysis on BAP, lactose reaction on eosin-methylene blue or MacConkey agar,l-pyrrolidonyl-β-naphthylamide (PYR), and 4-methylumbelliferyl-β-d-glucuronide (MUG) was evaluated. Identific

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6

Lee, Yun-Song, and Myung-Hee Chung. "Identification of Escherichia coli 8-oxoguanine endonuclease." Experimental & Molecular Medicine 32, no. 3 (September 2000): 155–60. http://dx.doi.org/10.1038/emm.2000.26.

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7

Ero, R., L. Peil, A. Liiv, and J. Remme. "Identification of pseudouridine methyltransferase in Escherichia coli." RNA 14, no. 10 (August 28, 2008): 2223–33. http://dx.doi.org/10.1261/rna.1186608.

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8

Rotar, Ancuta Mihaela, Cristina Anamaria Semeniuc, Sorin Apostu, Carmen Pop, Mihaela Duma, Ramona Suharoschi, and Larisa Giura. "Identification and Prevalence of Escherichia coli and Escherichia coli O157: H7 in Foods." Bulletin of University of Agricultural Sciences and Veterinary Medicine Cluj-Napoca. Food Science and Technology 70, no. 2 (November 13, 2013): 139. http://dx.doi.org/10.15835/buasvmcn-fst:9392.

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The objective of this study is to investigate the incidence of Escherichia coli in animal and non-animal foods, and mainly the incidence of the serotype O157: H7 producing verotoxin. The presence of common Escherichia coli and Escherichia coli O157: H7 in various foods (of animal and non animal origin) was performed in Transylvania area. We analyzed a total of one hundred forty-one samples of minced meat, one hundred twenty-six samples of meat , twenty six samples of meat products, five samples of alcoholic beverages, three samples of seafood, one hundred samples of cheese from pasteurized mil

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9

Blum, S., E. D. Heller, O. Krifucks, S. Sela, O. Hammer-Muntz, and G. Leitner. "Identification of a bovine mastitis Escherichia coli subset." Veterinary Microbiology 132, no. 1-2 (November 2008): 135–48. http://dx.doi.org/10.1016/j.vetmic.2008.05.012.

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10

N, Padmaja, Anand Acharya, and Nageswar Rao P. "IDENTIFICATION OF UROVIRULENT MARKERS IN UROPATHOGENIC ESCHERICHIA COLI." Journal of Evolution of Medical and Dental Sciences 1, no. 4 (October 30, 2012): 578–81. http://dx.doi.org/10.14260/jemds/90.

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11

Gomes, T. A., M. R. Toledo, L. R. Trabulsi, P. K. Wood, and J. G. Morris. "DNA probes for identification of enteroinvasive Escherichia coli." Journal of Clinical Microbiology 25, no. 10 (1987): 2025–27. http://dx.doi.org/10.1128/jcm.25.10.2025-2027.1987.

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12

Brandsma, J. A., M. de Ruijter, J. Brouwer, and P. van de Putte. "Identification of the uvrA6 mutation of Escherichia coli." Journal of Bacteriology 170, no. 2 (1988): 1012–14. http://dx.doi.org/10.1128/jb.170.2.1012-1014.1988.

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13

Pass, M. A., R. Odedra, and R. M. Batt. "Multiplex PCRs for Identification of Escherichia coliVirulence Genes." Journal of Clinical Microbiology 38, no. 5 (2000): 2001–4. http://dx.doi.org/10.1128/jcm.38.5.2001-2004.2000.

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PCRs were developed to detect 11 Escherichia colivirulence genes. Primers amplified the respective genes without cross-reaction with other genes. Specificity was maintained in multiplex reactions; excellent amplification of target genes was possible with a minimum of four multiplex reactions. These reactions successfully identified genes in E. coli from the feces of four dogs.

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14

Van Bost, S., E. Jacquemin, E. Oswald, and J. Mainil. "Multiplex PCRs for Identification of Necrotoxigenic Escherichia coli." Journal of Clinical Microbiology 41, no. 9 (September 1, 2003): 4480–82. http://dx.doi.org/10.1128/jcm.41.9.4480-4482.2003.

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15

Queiroz, D. M. M., E. N. Mendes, M. R. F. Toledo, and L. R. Trabulsi. "Identification of a new enteroinvasive Escherichia coli strain." Research in Microbiology 141, no. 6 (January 1990): 703–6. http://dx.doi.org/10.1016/0923-2508(90)90064-w.

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16

Varga, Frank J., and Joseph R. Dlpersio. "Use of the RIM ® Escherichia coli Kit for Rapid Identification of Escherichia coli." American Journal of Clinical Pathology 86, no. 6 (December 1, 1986): 761–64. http://dx.doi.org/10.1093/ajcp/86.6.761.

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17

Choi, Yong-Jun, Keun-Wook Lee, Hyung-Joo Kwon, and Doo-Sik Kim. "Identification of Immunostimulatory Oligodeoxynucleotide from Escherichia coli Genomic DNA." BMB Reports 39, no. 6 (November 30, 2006): 788–93. http://dx.doi.org/10.5483/bmbrep.2006.39.6.788.

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18

Machado, J., F. Grimont, and P. A. D. Grimont. "Computer identification of Escherichia coli rRNA gene restriction patterns." Research in Microbiology 149, no. 2 (February 1998): 119–35. http://dx.doi.org/10.1016/s0923-2508(98)80027-2.

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19

Kiel, M. "Identification of a ribosomal ATPase in Escherichia coli cells." Biochimie 81, no. 12 (December 1999): 1097–108. http://dx.doi.org/10.1016/s0300-9084(99)00352-1.

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20

DiGate, R. J., and K. J. Marians. "Identification of a potent decatenating enzyme from Escherichia coli." Journal of Biological Chemistry 263, no. 26 (September 1988): 13366–73. http://dx.doi.org/10.1016/s0021-9258(18)37713-5.

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21

Germani, Y. "IDENTIFICATION AND ASSAY METHODS FOR ESCHERICHIA COLIENTEROTOXINS, (IN ENGLISH)." Pediatric Infectious Disease Journal 7, no. 5 (May 1988): 373. http://dx.doi.org/10.1097/00006454-198805000-00034.

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22

Lindenthal, Christoph, and Eric A. Elsinghorst. "Identification of a Glycoprotein Produced by Enterotoxigenic Escherichia coli." Infection and Immunity 67, no. 8 (August 1, 1999): 4084–91. http://dx.doi.org/10.1128/iai.67.8.4084-4091.1999.

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ABSTRACT Enterotoxigenic Escherichia coli (ETEC) strain H10407 is capable of invading epithelial cell lines derived from the human ileocecum and colon in vitro. Two separate chromosomally encoded invasion loci (tia and tib) have been cloned from this strain. These loci direct nonadherent and noninvasive laboratory strains of E. coli to adhere to and invade cultured human intestinal epithelial cells. The tib locus directs the synthesis of TibA, a 104-kDa outer membrane protein that is directly correlated with the adherence and invasion phenotypes. TibA is synthesized as a 100-kDa precursor (pre

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23

ZHU, G., J. WANG, and X. ZHU. "Identification of 987P Protein Receptors for Enterotoxigenic Escherichia coli." Chinese Journal of Biotechnology 24, no. 3 (March 2008): 363–67. http://dx.doi.org/10.1016/s1872-2075(08)60017-5.

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24

Mehl, Ryan A., Cynthia Kinsland, and Tadhg P. Begley. "Identification of the Escherichia coliNicotinic Acid Mononucleotide Adenylyltransferase Gene." Journal of Bacteriology 182, no. 15 (August 1, 2000): 4372–74. http://dx.doi.org/10.1128/jb.182.15.4372-4374.2000.

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ABSTRACT The gene (ybeN) coding for nicotinate mononucleotide adenylyltransferase, an NAD(P) biosynthetic enzyme, has been identified and overexpressed in Escherichia coli. This enzyme catalyzes the reversible adenylation of nicotinate mononucleotide and shows product inhibition. The rate of adenylation of nicotinate mononucleotide is at least 20 times faster than the rate of adenylation of nicotinamide mononucleotide.

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25

Maynes, Jason T., Richard G. Yuan, and Floyd F. Snyder. "Identification, Expression, and Characterization of Escherichia coli Guanine Deaminase." Journal of Bacteriology 182, no. 16 (August 15, 2000): 4658–60. http://dx.doi.org/10.1128/jb.182.16.4658-4660.2000.

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ABSTRACT Using the human cDNA sequence corresponding to guanine deaminase, the Escherichia coli genome was scanned using the Basic Local Alignment Search Tool (BLAST), and a corresponding 439-residue open reading frame of unknown function was identified as having 36% identity to the human protein. The putative gene was amplified, subcloned into the pMAL-c2 vector, expressed, purified, and characterized enzymatically. The 50.2-kDa protein catalyzed the conversion of guanine to xanthine, having a Km of 15 μM with guanine and a k cat of 3.2 s−1. The bacterial enzyme shares a nine-residue heavy me

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26

Le Brun, N. E., S. C. Andrews, J. R. Guest, P. M. Harrison, G. R. Moore, and A. J. Thomson. "Identification of the ferroxidase centre of Escherichia coli bacterioferritin." Biochemical Journal 312, no. 2 (December 1, 1995): 385–92. http://dx.doi.org/10.1042/bj3120385.

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The bacterioferritin (BFR) of Escherichia coli takes up iron in the ferrous form and stores it within its central cavity as a hydrated ferric oxide mineral. The mechanism by which oxidation of iron (II) occurs in BFR is largely unknown, but previous studies indicated that there is ferroxidase activity associated with a site capable of forming a dinuclear-iron centre within each subunit [Le Brun, Wilson, Andrews, Harrison, Guest, Thomson and Moore (1993) FEBS Lett. 333, 197-202]. We now report site-directed mutagenesis experiments based on a putative dinuclear-metal-ion-binding site located wit

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27

Awano, Naoki, Masaru Wada, Hirotada Mori, Shigeru Nakamori, and Hiroshi Takagi. "Identification and Functional Analysis of Escherichia coli Cysteine Desulfhydrases." Applied and Environmental Microbiology 71, no. 7 (July 2005): 4149–52. http://dx.doi.org/10.1128/aem.71.7.4149-4152.2005.

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ABSTRACT In Escherichia coli, three additional proteins having l-cysteine desulfhydrase activity were identified as O-acetylserine sulfhydrylase-A, O-acetylserine sulfhydrylase-B, and MalY protein, in addition to tryptophanase and cystathionine β-lyase, which have been reported previously. The gene disruption for each protein was significantly effective for overproduction of l-cysteine and l-cystine. Growth phenotype and transcriptional analyses suggest that tryptophanase contributes primarily to l-cysteine degradation.

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28

Chart, H., T. Cheasty, and B. Rowe. "Serological identification of infection by verocytotoxin-producing Escherichia coli." Letters in Applied Microbiology 23, no. 5 (November 1996): 322–24. http://dx.doi.org/10.1111/j.1472-765x.1996.tb00199.x.

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29

van den Bosch, J. F., J. H. Hendriks, I. Gladigau, H. M. Willems, P. K. Storm, and F. K. de Graaf. "Identification of F11 fimbriae on chicken Escherichia coli strains." Infection and Immunity 61, no. 3 (1993): 800–806. http://dx.doi.org/10.1128/iai.61.3.800-806.1993.

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30

Kang, Sung-Min, Ji-Woong Choi, Youngkyun Lee, Su-Hyung Hong, and Heon-Jin Lee. "Identification of microRNA-Size, Small RNAs in Escherichia coli." Current Microbiology 67, no. 5 (June 20, 2013): 609–13. http://dx.doi.org/10.1007/s00284-013-0411-9.

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31

Liu, H., H. Wang, Z. Shi, Q. Liu, J. Zhu, N. He, H. Wang, and Z. Lu. "Identification of Escherichia coli O157:H7 with Oligonucleotide Arrays." Bulletin of Environmental Contamination and Toxicology 71, no. 4 (October 1, 2003): 826–32. http://dx.doi.org/10.1007/s00128-003-0209-8.

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32

Pestariati, Dr, and Dr Suhariyadi. "Detection of CTX-M Gene in Escherichia coli Producing Extended Spectrum Beta Lactamase (ESBL) Isolated from Patients with Urinary Tract Infection." International Journal of Medical Science and Clinical Invention 8, no. 09 (September 7, 2021): 5610–14. http://dx.doi.org/10.18535/ijmsci/v8i09.05.

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Escherichia coli is a Gram-negative bacterium from Enterobacteriaceae family causes urinary tract infections (UTI). A major problem encountered in antibiotics therapy is Multiple Drug Resistant Organisms (MDROs). MDROs occur because of the presence of resistance coding genes such as CTX-M which causes bacteria to produce the Extended Spectrum Beta-Lactamase (ESBL) enzyme. This study aims to detect the presence of the CTX-M gene in Extended-Spectrum Beta Lactamase (ESBL) Escherichia coli isolated from UTI patients. The study was conducted at the Institute of Tropical Disease (ITD) Airlangga Uni

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33

Yaguchi, Kazuya, Takashi Mikami, Kazuki Igari, Yusuke Yoshida, Katsushi Yokoyama, and Kozo Makino. "Identification of LexA regulated promoters in Escherichia coli O157:H7." Journal of General and Applied Microbiology 57, no. 4 (2011): 219–30. http://dx.doi.org/10.2323/jgam.57.219.

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34

Fujikawa, Norie, Hitoshi Kurumizaka, Mitsuyoshi Yamazoe, Sota Hiraga, and Shigeyuki Yokoyama. "Identification of functional domains of the Escherichia coli SeqA protein." Biochemical and Biophysical Research Communications 300, no. 3 (January 2003): 699–705. http://dx.doi.org/10.1016/s0006-291x(02)02891-7.

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35

Puño-Sarmiento, Juan, Luis Gazal, Leonardo Medeiros, Erick Nishio, Renata Kobayashi, and Gerson Nakazato. "Identification of Diarrheagenic Escherichia coli Strains from Avian Organic Fertilizers." International Journal of Environmental Research and Public Health 11, no. 9 (August 28, 2014): 8924–39. http://dx.doi.org/10.3390/ijerph110908924.

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36

Wang, Baoyu, Susan P. Jordan, and Marilyn Schuman Jorns. "Identification of a pterin derivative in Escherichia coli DNA photolyase." Biochemistry 27, no. 12 (June 1988): 4222–26. http://dx.doi.org/10.1021/bi00412a003.

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37

Walters, Matthew S., and Harry L. T. Mobley. "Identification of uropathogenic Escherichia coli surface proteins by shotgun proteomics." Journal of Microbiological Methods 78, no. 2 (August 2009): 131–35. http://dx.doi.org/10.1016/j.mimet.2009.04.013.

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38

Tree, Jai J., Sander Granneman, Sean P. McAteer, David Tollervey, and David L. Gally. "Identification of Bacteriophage-Encoded Anti-sRNAs in Pathogenic Escherichia coli." Molecular Cell 55, no. 2 (July 2014): 199–213. http://dx.doi.org/10.1016/j.molcel.2014.05.006.

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39

Carson, C. Andrew, Brian L. Shear, Mark R. Ellersieck, and Amha Asfaw. "Identification of Fecal Escherichia colifrom Humans and Animals by Ribotyping." Applied and Environmental Microbiology 67, no. 4 (April 1, 2001): 1503–7. http://dx.doi.org/10.1128/aem.67.4.1503-1507.2001.

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ABSTRACT Fecal pollution of water resources is an environmental problem of increasing importance. Identification of individual host sources of fecal Escherichia coli, such as humans, pets, production animals, and wild animals, is prerequisite to formulation of remediation plans. Ribotyping has been used to distinguish fecalE. coli of human origin from pooled fecal E. coli isolates of nonhuman origin. We have extended application of this technique to distinguishing fecal E. coli ribotype patterns from human and seven individual nonhuman hosts. Classification accuracy was best when the analysis

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40

Blum, S., S. Sela, O. Hammer-Muntz, O. Krifucks, L. Weisbelith, D. Heller, and G. Leitner. "Identification of adaptive traits of bovine mastitis Escherichia coli strains." Veterinary Immunology and Immunopathology 128, no. 1-3 (March 2009): 262. http://dx.doi.org/10.1016/j.vetimm.2008.10.111.

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41

Kuhnert, P., J. Nicolet, and J. Frey. "Rapid and accurate identification of Escherichia coli K-12 strains." Applied and environmental microbiology 61, no. 11 (1995): 4135–39. http://dx.doi.org/10.1128/aem.61.11.4135-4139.1995.

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42

Zhou, Z., and M. Syvanen. "Identification and sequence of the drpA gene from Escherichia coli." Journal of Bacteriology 172, no. 1 (1990): 281–86. http://dx.doi.org/10.1128/jb.172.1.281-286.1990.

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43

TSUKAMOTO, Teizo, and Takao KAWAI. "Identification of Escherichia coli O157 Antigen by Polymerase Chain Reaction." Journal of the Japanese Association for Infectious Diseases 72, no. 7 (1998): 738–41. http://dx.doi.org/10.11150/kansenshogakuzasshi1970.72.738.

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44

Barrett, Claire M. L., Joanne E. Mathers, and Colin Robinson. "Identification of key regions within the Escherichia coli TatAB subunits." FEBS Letters 537, no. 1-3 (January 29, 2003): 42–46. http://dx.doi.org/10.1016/s0014-5793(03)00068-1.

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45

Shulman, L. P. "Identification of Escherichia coli Genes Associated with Urinary Tract Infections." Yearbook of Obstetrics, Gynecology and Women's Health 2012 (January 2012): 295. http://dx.doi.org/10.1016/j.yobg.2012.06.015.

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46

Cook, William R., and Lawrence I. Rothfield. "Nucleoid-Independent Identification of Cell Division Sites in Escherichia coli." Journal of Bacteriology 181, no. 6 (March 15, 1999): 1900–1905. http://dx.doi.org/10.1128/jb.181.6.1900-1905.1999.

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ABSTRACT The mechanism used by Escherichia coli to determine the correct site for cell division is unknown. In this report, we have attempted to distinguish between a model in which septal position is determined by the position of the nucleoids and a model in which septal position is predetermined by a mechanism that does not involve nucleoid position. To do this, filaments with extended nucleoid-free regions adjacent to the cell poles were produced by simultaneous inactivation of cell division and DNA replication. The positions of septa that formed within the nucleoid-free zones after divisio

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47

Kalapos, M. P., G. J. Cao, S. R. Kushner, and N. Sarkar. "Identification of a Second Poly(A) Polymerase in Escherichia coli." Biochemical and Biophysical Research Communications 198, no. 2 (January 1994): 459–65. http://dx.doi.org/10.1006/bbrc.1994.1067.

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48

Singer, J. T., C. S. Barbier, and S. A. Short. "Identification of the Escherichia coli deoR and cytR gene products." Journal of Bacteriology 163, no. 3 (1985): 1095–100. http://dx.doi.org/10.1128/jb.163.3.1095-1100.1985.

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49

Mao, B. H., Y. F. Chang, J. Scaria, C. C. Chang, L. W. Chou, N. Tien, J. J. Wu, et al. "Identification of Escherichia coli Genes Associated with Urinary Tract Infections." Journal of Clinical Microbiology 50, no. 2 (November 9, 2011): 449–56. http://dx.doi.org/10.1128/jcm.00640-11.

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50

Toma, C., Y. Lu, N. Higa, N. Nakasone, I. Chinen, A. Baschkier, M. Rivas, and M. Iwanaga. "Multiplex PCR Assay for Identification of Human Diarrheagenic Escherichia coli." Journal of Clinical Microbiology 41, no. 6 (June 1, 2003): 2669–71. http://dx.doi.org/10.1128/jcm.41.6.2669-2671.2003.

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