Relevant bibliographies by topics / GBIF repository

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Academic literature on the topic 'GBIF repository'

Author: Grafiati
Published: 7 June 2025
Last updated: 2 August 2025

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Journal articles on the topic "GBIF repository"

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Döring, Markus, Thomas Jeppesen, and Olaf Bánki. "Introducing ChecklistBank: An index and repository for taxonomic data." Biodiversity Information Science and Standards 6 (August 24, 2022): e93938. https://doi.org/10.3897/biss.6.93938.

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As a joint development between Catalogue of Life (COL) and the Global Biodiversity Information Facility (GBIF), ChecklistBank supports the publication and curation of checklists and provides a platform for their consistent discovery, use and citation. GBIF has for some time maintained ChecklistBank as its repository for its community to share species checklist data and to drive species searches on GBIF. The collaboration built on an earlierversion, to add functions needed to assemble the COL Checklist (Bánki et al. 2022) and to make it an independent system. Its data model is built around the
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Miller, Joe. "Evolution of GBIF's Taxonomic Backbone." Biodiversity Information Science and Standards 6 (August 1, 2022): e91092. https://doi.org/10.3897/biss.6.91092.

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GBIF (Global Biodiversity Information Facility) is an international research data infrastructure that mediates data from various sources such as museum collections, citizen science observations and machine generated data such as camera trap and environmental DNA. Data shared with GBIF comes with a taxonomic identification—normally a Linnaean binomial. Large data flows are now coming to GBIF without formal names but are identified by informal species hypotheses, usually based on DNA sequence similarity to a curated reference library.GBIF's task is to integrate all this data in a repository that
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Waller, John. "Processing Country Centroids at the Global Biodiversity Information Facility." Biodiversity Information Science and Standards 7 (August 9, 2023): e110728. https://doi.org/10.3897/biss.7.110728.

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The Global Biodiversity Information Facility (GBIF) is an international network and data infrastructure that promotes open access to biodiversity data. GBIF serves as a global hub for aggregating and disseminating biodiversity information from diverse sources, including museums, research institutions, and citizen science projects.I will present recent additions to GBIF data quality measures, focusing on the introduction of the country centroid filtering feature. Additionally, I explore the functionality and significance of GBIF data quality flags, which aid in assessing the reliability and usa
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Agosti, Donat, Terry Catapano, Guido Sautter, et al. "Biodiversity Literature Repository (BLR), a repository for FAIR data and publications." Biodiversity Information Science and Standards 3 (June 19, 2019): e37197. https://doi.org/10.3897/biss.3.37197.

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Scholarly publications in taxonomy are used as the sole carrier of the communication channel to publicize the description of new species, more generally any kind of taxon, their augmentations in form of re-descriptions to small notes such as additional observation records, or deprecations when the name of a taxon is changing. This is communicated in a highly standardized way. For nomenclatural issues, the Codes (e.g. International Code of Zoological Nomenclature) require certain elements, and for comparative reasons, highly formalized language, document structure, illustrations and citation sy
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Pando, Francisco, and Francisco Bonet. "Making LTER Data FAIR: A workbench using DEIMS datasets and GBIF Tools." Biodiversity Information Science and Standards 3 (June 19, 2019): e37257. https://doi.org/10.3897/biss.3.37257.

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DEIMS-SDR (Dynamic Ecological Information Management System - Site and dataset registry, Wohner et al. 2019) is one of the largest repositories of long-term ecological research (LTER) datasets. It provides sophisticated searching tools by metadata elements and identifiers for all the 930 contained datasets, most of them from European sites. Whereas datasets' metadata are highly structured and searchable, datasets themselves have little standardization in terms of content, identifiers or license, making data integration difficult or cumbersome. Adopting the data FAIR guiding principles(Wilkinso
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Alvares, Diego, Marcus Guidoti, Felipe Simoes, Carolina Sokolowicz, and Donat Agosti. "The BHL-Plazi Partnership: Getting data from the 1800s directly into 21st century, reused digital accessible knowledge." Biodiversity Information Science and Standards 5 (September 23, 2021): e75604. https://doi.org/10.3897/biss.5.75604.

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Plazi is a Swiss non-governmental organization dedicated to the liberation of data imprisoned in flat, dead-end formats such as PDFs. In the process, the data therein is annotated and exported in various formats, following field-specific standards, facilitating free access and reutilization by several other service providers and end-users. This data mining and enhancement process allows for the rediscovery of the known biodiversity since the knowledge on known taxa is published into an ever-growing corpus of papers, chapters and books, inaccessible to the state-of-the-art service providers, su
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7

Svenningsen, Cecilie, Marcos Gonzalez, and Tim Robertson. "GBIF's Vocabulary Server: A Tool to Create, Manage and Apply Controlled Vocabularies for Biodiversity." Biodiversity Information Science and Standards 8 (September 26, 2024): e137853. https://doi.org/10.3897/biss.8.137853.

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Global Biodiversity Information Facility's (GBIF) global index of primary biodiversity data is based on contributions from more than 2,200 publishing institutions and over 100,000 datasets. Data originate from a broad variety of fields, from research to citizen science, from eDNA through specimen collections to observations and monitoring projects, across all taxonomic groups, and with a wide range of datasets and data types. Equally variable is the underlying motivation and focus for data collection and digitization. Even within commonly used domain concepts like Kingdom or OccurrenceStatus,
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8

Tattersall, Katherine, Peggy Newman, Sachit Rajbhandari, Dave Watts, and Mahmoud Sadeghi. "An Australian Model of Cooperative Data Publishing to OBIS and GBIF." Biodiversity Information Science and Standards 7 (September 7, 2023): e112228. https://doi.org/10.3897/biss.7.112228.

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The Australian Commonwealth Science and Industrial Research Organisation (CSIRO) hosts both the Australian Ocean Biodiversity Information System (OBIS) and Global Biodiversity Information Facility (GBIF) nodes within the National Collections and Marine Infrastructure (NCMI) business unit. OBIS-AU is led by the NCMI Information and Data Centre and publishes marine biodiversity data in the Darwin Core (DwC) standard via an Integrated Publishing Toolkit (IPT), with over 450 marine datasets at present. The Australian GBIF node is hosted by a separate team at the Atlas of Living Australia (ALA), a
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9

Agosti, Donat, Patrick Ruch, Gonzalez Lopez Jose Benito, and Lyubomir Penev. "Enabling Published Taxonomic Data to be used to Address the Biodiversity Crisis: Biodiversity Literature Repository and TreatmentBank." Biodiversity Information Science and Standards 6 (August 2, 2022): e91167. https://doi.org/10.3897/biss.6.91167.

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To understand the loss of species, a benchmark is needed, e.g. the status of biodiversity in 1992 when the Convention on Biological Diversity recognized biodiversity crisis to compare to its status in the successive year. Though we are far from knowning how many species there are on planet Earth, we keep track of their descriptions and number through the information kept in our libraries. Each species discovered is represented therein by at least one taxononic treatment. The library includes an estimated 500 million pages and is updated daily with an estimated 17–18,000 new species annually an
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DA SILVA, JAQUELINE SANTANA TAVARES FERREIRA, JOCELIA GRAZIA, and KIM RIBEIRO BARÃO. "Redescription of Steleocoris Mayr, 1864 and Theloris Thunberg, 1783 (Hemiptera: Pentatomidae), two poorly known African stink bugs." Zootaxa 4938, no. 4 (2021): 475–86. http://dx.doi.org/10.11646/zootaxa.4938.4.6.

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The knowledge about the monotypic genera Steleocoris Mayr and Theloris Thunberg is restricted to their original descriptions and subsequent nomenclatural acts. These genera are primarily distributed in South Africa and are two of the few genera of Carpocorini (Pentatomidae: Pentatominae) occurring in Africa. Here, we redescribe Steleocoris comma (Thunberg) and Theloris costata (Thunberg) and illustrate the genitalia of both sexes for the first time. Also, an occurrence map is provided based on collection labels from analyzed specimens and records available on GBIF and the web repository iNatur
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Book chapters on the topic "GBIF repository"

1

Mohammed, Ryan S., and Lanya Fanovich. "Biodiversity in the Caribbean from 1950 to the Present." In Biodiversity - Handbook of the Anthropocene in Latin America II. Bielefeld University Press / transcript Verlag, 2024. http://dx.doi.org/10.14361/9783839470121-021.

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The Caribbean is regarded as a biodiversity hotspot, with high levels of endemism in some northern regions and mainland species in some southern countries. The region's biodiversity has been documented since well before the 1950s, but knowledge transfer and sharing have been chronic challenges. First, much of the documentation was done by people who were not from the Caribbean, therefore the information was taken with them when they returned to their home countries. Second, because several European countries claimed various Caribbean islands as overseas territories, data across islands was not
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