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Journal articles on the topic 'Gene regulation and development'

Author: Grafiati

Published: 4 June 2021

Last updated: 7 February 2022

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1

de-Leon, Smadar Ben-Tabou, and Eric H. Davidson. "Gene Regulation: Gene Control Network in Development." Annual Review of Biophysics and Biomolecular Structure 36, no. 1 (2007): 191–212. http://dx.doi.org/10.1146/annurev.biophys.35.040405.102002.

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2

Richards, G. "Gene Regulation During Insect Development." International Journal of Invertebrate Reproduction and Development 12, no. 2 (1987): 115–44. http://dx.doi.org/10.1080/01688170.1987.10510312.

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3

Dong, Peng, and Zhe Liu. "Shaping development by stochasticity and dynamics in gene regulation." Open Biology 7, no. 5 (2017): 170030. http://dx.doi.org/10.1098/rsob.170030.

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Animal development is orchestrated by spatio-temporal gene expression programmes that drive precise lineage commitment, proliferation and migration events at the single-cell level, collectively leading to large-scale morphological change and functional specification in the whole organism. Efforts over decades have uncovered two ‘seemingly contradictory’ mechanisms in gene regulation governing these intricate processes: (i) stochasticity at individual gene regulatory steps in single cells and (ii) highly coordinated gene expression dynamics in the embryo. Here we discuss how these two layers of

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4

Robbins, J. "Regulation of cardiac gene expression during development." Cardiovascular Research 31, supp1 (1996): E2—E16. http://dx.doi.org/10.1016/s0008-6363(95)00081-x.

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5

ROBBINS, J. "Regulation of cardiac gene expression during development." Cardiovascular Research 31 (February 1996): E2—E16. http://dx.doi.org/10.1016/0008-6363(95)00081-x.

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6

Petit, Florence, Karen E. Sears, and Nadav Ahituv. "Limb development: a paradigm of gene regulation." Nature Reviews Genetics 18, no. 4 (2017): 245–58. http://dx.doi.org/10.1038/nrg.2016.167.

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7

Liu, Li, Hetal Parekh-Olmedo, and Eric B. Kmiec. "The development and regulation of gene repair." Nature Reviews Genetics 4, no. 9 (2003): 679–89. http://dx.doi.org/10.1038/nrg1156.

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8

Burch, John B. E. "Regulation of GATA gene expression during vertebrate development." Seminars in Cell & Developmental Biology 16, no. 1 (2005): 71–81. http://dx.doi.org/10.1016/j.semcdb.2004.10.002.

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9

Kohzaki, Hidetsugu. "Epigenetic regulation affects gene amplification in Drosophila development." Frontiers in Bioscience 25, no. 4 (2020): 632–45. http://dx.doi.org/10.2741/4825.

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10

DAMEN, WIM G. M., ANKE H. E. M. KLERKX, and ANDRÉ E. VAN LOON. "Cell-specific gene regulation in early molluscan development." Invertebrate Reproduction & Development 31, no. 1-3 (1997): 1–9. http://dx.doi.org/10.1080/07924259.1997.9672557.

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11

Chen, Enhong, Ronald Piddington, Sylvia Decker, et al. "Regulation of amelogenin gene expression during tooth development." Developmental Dynamics 199, no. 3 (1994): 189–98. http://dx.doi.org/10.1002/aja.1001990304.

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12

Kugou, Kazuto, Hiroyuki Sasanuma, Kouji Matsumoto, Katsuhiko Shirahige, and Kunihiro Ohta. "Mre11 mediates gene regulation in yeast spore development." Genes & Genetic Systems 82, no. 1 (2007): 21–33. http://dx.doi.org/10.1266/ggs.82.21.

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13

Khosla, M., S. M. Robbins, G. B. Spiegelman, and G. Weeks. "Regulation of DdrasG gene expression during Dictyostelium development." Molecular and Cellular Biology 10, no. 3 (1990): 918–22. http://dx.doi.org/10.1128/mcb.10.3.918.

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DdrasG gene expression during the early development of Dictyostelium discoideum has been examined in detail. The amount of DdrasG-specific mRNA increased approximately twofold during the first 2 to 3 h of development and then declined rapidly, reaching negligible levels by the aggregation stage. The increase in mRNA levels that occurred during the first 2 to 3 h of development also occurred during differentiation in cell suspensions and was enhanced when cells were shaken rapidly. This initial increase was unaffected by cell density. When cells were set up to differentiate on filters, the addi

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14

Slavkin, H. C. "Gene Regulation in the Development of Oral Tissues." Journal of Dental Research 67, no. 9 (1988): 1142–49. http://dx.doi.org/10.1177/00220345880670090101.

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15

Cassidy, Justin J., Sebastian M. Bernasek, Rachael Bakker, et al. "Repressive Gene Regulation Synchronizes Development with Cellular Metabolism." Cell 178, no. 4 (2019): 980–92. http://dx.doi.org/10.1016/j.cell.2019.06.023.

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16

Khosla, M., S. M. Robbins, G. B. Spiegelman, and G. Weeks. "Regulation of DdrasG gene expression during Dictyostelium development." Molecular and Cellular Biology 10, no. 3 (1990): 918–22. http://dx.doi.org/10.1128/mcb.10.3.918-922.1990.

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DdrasG gene expression during the early development of Dictyostelium discoideum has been examined in detail. The amount of DdrasG-specific mRNA increased approximately twofold during the first 2 to 3 h of development and then declined rapidly, reaching negligible levels by the aggregation stage. The increase in mRNA levels that occurred during the first 2 to 3 h of development also occurred during differentiation in cell suspensions and was enhanced when cells were shaken rapidly. This initial increase was unaffected by cell density. When cells were set up to differentiate on filters, the addi

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17

Witte, David, Bruce Aronow, and Judith Harmony. "Understanding Cardiac Development Through the Perspective of Gene Regulation and Gene Manipulation." Fetal and Pediatric Pathology 16, no. 2 (1996): 173–94. http://dx.doi.org/10.3109/15513819609169282.

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18

Witte, David. "UNDERSTANDING CARDIAC DEVELOPMENT THROUGH THE PERSPECTIVE OF GENE REGULATION AND GENE MANIPULATION." Fetal and Pediatric Pathology 16, no. 2 (1996): 173–94. http://dx.doi.org/10.1080/713601170.

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19

Harrington, Kevin J., Andrew R. Bateman, Alan A. Melcher, Atique Ahmed, and Richard G. Vile. "Cancer Gene Therapy: Part 1. Vector Development and Regulation of Gene Expression." Clinical Oncology 14, no. 1 (2002): 3–16. http://dx.doi.org/10.1053/clon.2001.0002.

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20

Witte, David P., Bruce J. Aronow, and Judith A. K. Harmony. "Understanding Cardiac Development Through the Perspective of Gene Regulation and Gene Manipulation." Pediatric Pathology & Laboratory Medicine 16, no. 2 (1996): 173–94. http://dx.doi.org/10.1080/15513819609169282.

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21

Witte, David P., Bruce J. Aronow, and Judith A. K. Harmony. "UNDERSTANDING CARDIAC DEVELOPMENT THROUGH THE PERSPECTIVE OF GENE REGULATION AND GENE MANIPULATION." Pediatric Pathology & Laboratory Medicine 16, no. 2 (1996): 173–94. http://dx.doi.org/10.1080/107710496175688.

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22

Choi, Kyunghee. "Hemangioblast development and regulation." Biochemistry and Cell Biology 76, no. 6 (1998): 947–56. http://dx.doi.org/10.1139/o99-007.

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Hematopoietic and endothelial cell lineages are the first to mature from mesoderm in the developing embryo. However, little is known about the molecular and (or) cellular events leading to hematopoietic commitment. The recent applications of technology utilizing gene targeted mice and the employment of many available in vitro systems have facilitated our understanding of hematopoietic establishment in the developing embryo. It is becoming clear that embryonic hematopoiesis occurs both in the extra-embryonic yolk sac and within the embryo proper in the mouse. The existence of the long pursued h

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23

Chen, Kuan-Wei, and Linyi Chen. "Epigenetic Regulation of BDNF Gene during Development and Diseases." International Journal of Molecular Sciences 18, no. 3 (2017): 571. http://dx.doi.org/10.3390/ijms18030571.

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24

Zhuang, Y. "Regulation of E2A gene expression in B-lymphocyte development." Molecular Immunology 40, no. 16 (2004): 1165–77. http://dx.doi.org/10.1016/j.molimm.2003.11.031.

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25

Gonzalez, Federico, Denis Duboule, and François Spitz. "Transgenic analysis of Hoxd gene regulation during digit development." Developmental Biology 306, no. 2 (2007): 847–59. http://dx.doi.org/10.1016/j.ydbio.2007.03.020.

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26

Villarejo Balcells, Barbara, Peter W. J. Rigby, and Jaime J. Carvajal. "Transcriptional regulation of the FoxO1 gene during mouse development." Developmental Biology 319, no. 2 (2008): 572. http://dx.doi.org/10.1016/j.ydbio.2008.05.372.

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27

Willardsen, Minde I., Arminda Suli, Yi Pan, et al. "Temporal regulation of Ath5 gene expression during eye development." Developmental Biology 326, no. 2 (2009): 471–81. http://dx.doi.org/10.1016/j.ydbio.2008.10.046.

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28

Ohkumo, Tsuyoshi, Koichi Hasegawa, Kazushirou Fujiwara, and Kazuaki Yoshikawa. "Epigenetic regulation of necdin gene expression during neural development." Neuroscience Research 68 (January 2010): e59. http://dx.doi.org/10.1016/j.neures.2010.07.029.

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29

Huppert, Julian Leon. "Four-stranded DNA: cancer, gene regulation and drug development." Philosophical Transactions of the Royal Society A: Mathematical, Physical and Engineering Sciences 365, no. 1861 (2007): 2969–84. http://dx.doi.org/10.1098/rsta.2007.0011.

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DNA can form many structures other than the famous double helix. In particular, guanine-rich DNA of particular sequences can form four-stranded structures, called G-quadruplexes. This article describes the structural form of these sequences, techniques for predicting which sequences can fold up in this manner and efforts towards stability prediction. It then discusses the biological significance of these structures, focusing on their importance in telomeric regions at the end of chromosomes, and their existence in gene promoters and mRNA, where they may be involved with regulating transcriptio

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30

Klattig, J., R. Sierig, D. Kruspe, M. S. Makki, and C. Englert. "WT1-Mediated Gene Regulation in Early Urogenital Ridge Development." Sexual Development 1, no. 4 (2007): 238–54. http://dx.doi.org/10.1159/000104774.

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31

Balbi, Virginia, and Terri L. Lomax. "Regulation of Early Tomato Fruit Development by theDiageotropica Gene." Plant Physiology 131, no. 1 (2003): 186–97. http://dx.doi.org/10.1104/pp.010132.

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32

Cheng, Tian-Lin, and Zilong Qiu. "MeCP2: multifaceted roles in gene regulation and neural development." Neuroscience Bulletin 30, no. 4 (2014): 601–9. http://dx.doi.org/10.1007/s12264-014-1452-6.

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33

Mallo, Moisés, and Claudio R. Alonso. "The regulation of Hox gene expression during animal development." Development 140, no. 19 (2013): 3951–63. http://dx.doi.org/10.1242/dev.068346.

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34

Grand, R. J., R. K. Montgomery, M. Verhave, S. D. Krasinski, E. H. H. M. Rings, and H. A. Büller. "75. TRANSCRIPTIONAL REGULATION OF ENTEROCYTE GENE EXPRESSION DURING DEVELOPMENT." Journal of Pediatric Gastroenterology and Nutrition 17, no. 4 (1993): 471. http://dx.doi.org/10.1097/00005176-199311000-00101.

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35

Grosveld, Frank G., and Denis Duboule. "Differentiation and gene regulation." Current Opinion in Genetics & Development 17, no. 5 (2007): 369–72. http://dx.doi.org/10.1016/j.gde.2007.10.001.

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36

ROSENFELD, M., and C. GLASS. "Differentiation and gene regulation." Current Opinion in Genetics & Development 14, no. 5 (2004): 455–59. http://dx.doi.org/10.1016/s0959-437x(04)00129-7.

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37

Bannister, Andrew J., and Tony Kouzarides. "Differentiation and gene regulation." Current Opinion in Genetics & Development 15, no. 5 (2005): 473–75. http://dx.doi.org/10.1016/j.gde.2005.08.008.

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38

Pirrotta, Vincenzo, and Maarten van Lohuizen. "Differentiation and gene regulation." Current Opinion in Genetics & Development 16, no. 5 (2006): 443–46. http://dx.doi.org/10.1016/j.gde.2006.08.014.

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39

Zhao, Xiu-Ju, and Hexian Zhuo. "ECR-MAPK Regulation in Liver Early Development." BioMed Research International 2014 (2014): 1–9. http://dx.doi.org/10.1155/2014/850802.

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Early growth is connected to a key link between embryonic development and aging. In this paper, liver gene expression profiles were assayed at postnatal day 22 and week 16 of age. Meanwhile another independent animal experiment and cell culture were carried out for validation. Significance analysis of microarrays, qPCR verification, drug induction/inhibition assays, and metabonomics indicated thatalpha-2u globulin(extracellular region)-socs2(-SH2-containing signals/receptor tyrosine kinases)-ppp2r2a/pik3c3(MAPK signaling)-hsd3b5/cav2(metabolism/organization) plays a vital role in early develop

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40

Varchenko, O., M. Kuchuk, M. Parii, and Y. Symonenko. "Matching of the GFP Gene Expression Levels by Different Terminator Sequences Regulation." Mikrobiolohichnyi Zhurnal 82, no. 6 (2020): 74–83. http://dx.doi.org/10.15407/microbiolj82.06.074.

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The ability to express foreign genes in plant cells provides a powerful tool for studying the function of specific genes. In addition, the creation of genetically modified plants may provide new important features that are useful for industrial production or pharmaceutical applications. One of the key parameters for the development of a high level of heterologous genes expression is the efficiency of terminators used in genetic engineering, since the level of gene expression depends on its choice. Aim. Study of the gfp gene expression regulation in Nicotiana rustica L. tissues by different ter

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41

Goto, Tetsuya, and Marilyn Monk. "Regulation of X-Chromosome Inactivation in Development in Mice and Humans." Microbiology and Molecular Biology Reviews 62, no. 2 (1998): 362–78. http://dx.doi.org/10.1128/mmbr.62.2.362-378.1998.

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SUMMARY Dosage compensation for X-linked genes in mammals is accomplished by inactivating one of the two X chromosomes in females. X-chromosome inactivation (XCI) occurs during development, coupled with cell differentiation. In somatic cells, XCI is random, whereas in extraembryonic tissues, XCI is imprinted in that the paternally inherited X chromosome is preferentially inactivated. Inactivation is initiated from an X-linked locus, the X-inactivation center (Xic), and inactivity spreads along the chromosome toward both ends. XCI is established by complex mechanisms, including DNA methylation,

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42

Melton, Kristin, R. "Gene expression and regulation of hindbrain and spinal cord development." Frontiers in Bioscience 9, no. 1-3 (2004): 117. http://dx.doi.org/10.2741/1202.

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43

Lochs, Silke J. A., Samy Kefalopoulou, and Jop Kind. "Lamina Associated Domains and Gene Regulation in Development and Cancer." Cells 8, no. 3 (2019): 271. http://dx.doi.org/10.3390/cells8030271.

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The nuclear lamina (NL) is a thin meshwork of filaments that lines the inner nuclear membrane, thereby providing a platform for chromatin binding and supporting genome organization. Genomic regions contacting the NL are lamina associated domains (LADs), which contain thousands of genes that are lowly transcribed, and enriched for repressive histone modifications. LADs are dynamic structures that shift spatial positioning in accordance with cell-type specific gene expression changes during differentiation and development. Furthermore, recent studies have linked the disruption of LADs and altera

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44

Weston, Wayde M., Angela B. Freeman, Christian Haberecht, et al. "Phosphatase regulation of gene expression during development of the palate." Life Sciences 71, no. 16 (2002): 1849–62. http://dx.doi.org/10.1016/s0024-3205(02)01947-1.

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45

Cvekl, Ales, and Melinda K. Duncan. "Genetic and epigenetic mechanisms of gene regulation during lens development." Progress in Retinal and Eye Research 26, no. 6 (2007): 555–97. http://dx.doi.org/10.1016/j.preteyeres.2007.07.002.

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46

DeCook, Rhonda, Sonia Lall, Dan Nettleton, and Stephen H. Howell. "Genetic Regulation of Gene Expression During Shoot Development in Arabidopsis." Genetics 172, no. 2 (2005): 1155–64. http://dx.doi.org/10.1534/genetics.105.042275.

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47

Zhao, Weian, Lingjuan Liu, Bo Pan, et al. "Epigenetic Regulation of Cardiac Myofibril Gene Expression During Heart Development." Cardiovascular Toxicology 15, no. 3 (2014): 203–9. http://dx.doi.org/10.1007/s12012-014-9278-7.

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48

Fujieda, H., J. Scher, W. Lukita-atmadja, and G. M. Brown. "Gene regulation of melatonin and dopamine receptors during eye development." Neuroscience 120, no. 2 (2003): 301–7. http://dx.doi.org/10.1016/s0306-4522(03)00298-7.

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49

Yanai, Itai. "Development and Evolution through the Lens of Global Gene Regulation." Trends in Genetics 34, no. 1 (2018): 11–20. http://dx.doi.org/10.1016/j.tig.2017.09.011.

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50

Nonogaki, Hiroyuki. "MicroRNA Gene Regulation Cascades During Early Stages of Plant Development." Plant and Cell Physiology 51, no. 11 (2010): 1840–46. http://dx.doi.org/10.1093/pcp/pcq154.

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