Relevant bibliographies by topics / GYF domain

Contents

  1. Journal articles
  2. Dissertations / Theses
  3. Books
  4. Book chapters
  5. Conference papers
  6. Reports

Academic literature on the topic 'GYF domain'

Author: Grafiati
Published: 15 June 2024
Last updated: 31 July 2025

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Journal articles on the topic "GYF domain"

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Kofler, Michael M., and Christian Freund. "The GYF domain." FEBS Journal 273, no. 2 (2006): 245–56. http://dx.doi.org/10.1111/j.1742-4658.2005.05078.x.

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Zhang, Xiaobo, Lei Qin, Junxing Lu, et al. "Genome-Wide Identification of GYF-Domain Encoding Genes in Three Brassica Species and Their Expression Responding to Sclerotinia sclerotiorum in Brassica napus." Genes 14, no. 1 (2023): 224. http://dx.doi.org/10.3390/genes14010224.

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GYF (glycine-tyrosine-phenylalanine)-domain-containing proteins, which were reported to participate in many aspects of biological processes in yeast and animals, are highly conserved adaptor proteins existing in almost all eukaryotes. Our previous study revealed that GYF protein MUSE11/EXA1 is involved in nucleotide-binding leucine-rich repeat (NLR) receptor-mediated defense in Arabidopsis thaliana. However, the GYF-domain encoding homologous genes are still not clear in other plants. Here, we performed genome-wide identification of GYF-domain encoding genes (GYFs) from Brassica napus and its
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Mayya, Vinay K., Mathieu N. Flamand, Alice M. Lambert, et al. "microRNA-mediated translation repression through GYF-1 and IFE-4 in C. elegans development." Nucleic Acids Research 49, no. 9 (2021): 4803–15. http://dx.doi.org/10.1093/nar/gkab162.

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Abstract microRNA (miRNA)-mediated gene silencing is enacted through the recruitment of effector proteins that direct translational repression or degradation of mRNA targets, but the relative importance of their activities for animal development remains unknown. Our concerted proteomic surveys identified the uncharacterized GYF-domain encoding protein GYF-1 and its direct interaction with IFE-4, the ortholog of the mammalian translation repressor 4EHP, as key miRNA effector proteins in Caenorhabditis elegans. Recruitment of GYF-1 protein to mRNA reporters in vitro or in vivo leads to potent tr
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Kofler, Michael, Kathrin Motzny, Michael Beyermann, and Christian Freund. "Novel Interaction Partners of the CD2BP2-GYF Domain." Journal of Biological Chemistry 280, no. 39 (2005): 33397–402. http://dx.doi.org/10.1074/jbc.m503989200.

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Mansour, Hala, Alejandro Cabezas-Cruz, Véronique Peucelle, et al. "Characterization of GEXP15 as a Potential Regulator of Protein Phosphatase 1 in Plasmodium falciparum." International Journal of Molecular Sciences 24, no. 16 (2023): 12647. http://dx.doi.org/10.3390/ijms241612647.

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The Protein Phosphatase type 1 catalytic subunit (PP1c) (PF3D7_1414400) operates in combination with various regulatory proteins to specifically direct and control its phosphatase activity. However, there is little information about this phosphatase and its regulators in the human malaria parasite, Plasmodium falciparum. To address this knowledge gap, we conducted a comprehensive investigation into the structural and functional characteristics of a conserved Plasmodium-specific regulator called Gametocyte EXported Protein 15, GEXP15 (PF3D7_1031600). Through in silico analysis, we identified th
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Opitz, Robert, Matthias Müller, Cédric Reuter, et al. "A modular toolkit to inhibit proline-rich motif–mediated protein–protein interactions." Proceedings of the National Academy of Sciences 112, no. 16 (2015): 5011–16. http://dx.doi.org/10.1073/pnas.1422054112.

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Small-molecule competitors of protein–protein interactions are urgently needed for functional analysis of large-scale genomics and proteomics data. Particularly abundant, yet so far undruggable, targets include domains specialized in recognizing proline-rich segments, including Src-homology 3 (SH3), WW, GYF, and Drosophila enabled (Ena)/vasodilator-stimulated phosphoprotein (VASP) homology 1 (EVH1) domains. Here, we present a modular strategy to obtain an extendable toolkit of chemical fragments (ProMs) designed to replace pairs of conserved prolines in recognition motifs. As proof-of-principl
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Kofler, Michael, Kathrin Motzny, and Christian Freund. "GYF Domain Proteomics Reveals Interaction Sites in Known and Novel Target Proteins." Molecular & Cellular Proteomics 4, no. 11 (2005): 1797–811. http://dx.doi.org/10.1074/mcp.m500129-mcp200.

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Albert, Gesa I., Christoph Schell, Karin M. Kirschner, et al. "The GYF domain protein CD2BP2 is critical for embryogenesis and podocyte function." Journal of Molecular Cell Biology 7, no. 5 (2015): 402–14. http://dx.doi.org/10.1093/jmcb/mjv039.

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Gu, Wei, Michael Kofler, Iris Antes, Christian Freund, and Volkhard Helms. "Alternative Binding Modes of Proline-Rich Peptides Binding to the GYF Domain†." Biochemistry 44, no. 17 (2005): 6404–15. http://dx.doi.org/10.1021/bi0479914.

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Choi, Jung-Hyun, Israel Shpilman, Niaz Mahmood, et al. "No evidence that human GIGYF2 interacts with GRB10: implications for human disease." Life Science Alliance 8, no. 9 (2025): e202503334. https://doi.org/10.26508/lsa.202503334.

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GIGYF2 (growth factor receptor–bound protein 10 [GRB10]-interacting GYF [glycine–tyrosine–phenylalanine] protein 2) reduces mRNA stability and translation via microRNAs, ribosome quality control, and several RNA-binding proteins. GIGYF2 was first identified in mouse cell lines as an interacting partner with GRB10, which binds to the insulin receptor and the insulin-like growth factor receptor 1. Mutations in the humanGIGYF2gene were reported in autism. In mouse models,Gigyf2mutations engender several diseases. It was therefore thought that the GIGYF2-associated disease in humans is caused by d
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Dissertations / Theses on the topic "GYF domain"

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Georgiev, Alexander. "Membrane Stress and the Role of GYF Domain Proteins." Doctoral thesis, Stockholm : Department of Biochemistry and Biophysics, Stockholm university, 2008. http://urn.kb.se/resolve?urn=urn:nbn:se:su:diva-7764.

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Albert, Gesa Ines [Verfasser]. "Functional characterization of GYF-domain containing proteins / Gesa Ines Albert." Berlin : Freie Universität Berlin, 2012. http://d-nb.info/1026695856/34.

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Mansour, Hala. "Characterization of GEXP15 as a potential regulator of protein phosphatase 1 in Plasmodium falciparum." Electronic Thesis or Diss., Université de Lille (2022-....), 2023. http://www.theses.fr/2023ULILS068.

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Le paludisme est l'une des maladies infectieuses les plus répandues, menaçant 40% de la population mondiale, provoquant environ 300 millions de cas et 450 000 décès chaque année, touchant principalement les enfants de moins de 5 ans. En l'absence d'un vaccin efficace et face à l'émergence de la résistance aux médicaments, il y a un besoin urgent pour mieux comprendre la biologie du parasite afin de proposer des traitements innovants. Le parasite du paludisme, Plasmodium, responsable de la maladie, présente un cycle de vie complexe et un processus de division cellulaire unique. Par rapport aux
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Kofler, Michael. "GYF domains a class of proline rich ligand binding adaptor domains /." kostenfrei, 2007. http://www.diss.fu-berlin.de/2007/261/index.html.

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Sekharan, Monica R. "Structural studies of the cGMP-binding GAF domain of PDE5A /." Thesis, Connect to this title online; UW restricted, 2004. http://hdl.handle.net/1773/8502.

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Lee, Hyung Suk 1971. "Proximity of body & mind : urban gym as a heterotopic domain." Thesis, Massachusetts Institute of Technology, 2002. http://hdl.handle.net/1721.1/68380.

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Thesis (M.Arch.)--Massachusetts Institute of Technology, Dept. of Architecture, 2002.<br>Includes bibliographical references (p. 78-79).<br>In the present urban space, where an individual is exposed to the conditions of heterogeneity and anonymity, a conventional Bodybuilding Gym opens up certain issues of emplacement of un/nder-spoken men's body and its close(t)ed placement in the society. While the rituals of entering and exiting the gym and 'building' the muscularity raise questions of men's reflected societal states in North America, the changing social appreciation of the 'new' body image
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Alharbi, Mona. "Structural investigation of the GAF domain protein BPSL2418 from Burkholderia pseudomallei." Thesis, University of Sheffield, 2014. http://etheses.whiterose.ac.uk/8314/.

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A new family of methionine-sulfoxide reductase (Msr) was recently discovered, and was named free methionine sulfoxide reductase (fRMsr). This family includes enzymes with a reductase activity toward the free R isomer of a methionine sulfoxide substrate. The fRMsrs have a GAF domain topology, a domain, which was previously identified as having in some cases a cyclic nucleotide phosphodiesterase activity. The classification of fRMsrs as GAF domains revealed a new function can be added to the GAF domain family. Interestingly the four members identified in the fRMsr family share the GAF domain str
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Libiad, Marouane. "La free R Méthionine sulfoxyde réductase (fRMsr) de Neisseria meningitidis : Mécanisme, catalyse et spécificité structurale." Thesis, Université de Lorraine, 2012. http://www.theses.fr/2012LORR0335/document.

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Les Méthionine sulfoxyde réductases (Msr) catalysent la réduction spécifique des méthionine sulfoxydes (Met-O) en méthionines (Met). Elles sont impliquées dans la résistance des cellules à un stress oxydant et dans la virulence des bactéries pathogènes du genre Neisseria. Cette famille d'enzyme se compose de trois classes, les MsrA et B, structuralement distinctes, et présentant une stéréosléctivité respectivement pour l'isomère S et R de la fonction sulfoxyde du substrat. Une troisième classe, découverte récemment, et appelée fRMsr, catalyse la réduction spécifique de la forme libre de l'isom
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Rao, Shuyun. "Vav3 Potentiation of Androgen Receptor Activity in Prostate Cancer." Scholarly Repository, 2010. http://scholarlyrepository.miami.edu/oa_dissertations/359.

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Most patients undergoing androgen deprivation therapy relapse eventually and progress to androgen-independent (AI) prostate cancer. Although the mechanisms underlying progression to AI prostate cancer are not well understood, studies suggest that androgen receptor (AR) is still required for AI prostate cancer. Our lab found that Vav3, a Rho GTPase guanine nucleotide exchange factor (GEF), is up-regulated during the progression of androgen-dependent human prostate cancer cells to androgen-independence in vivo and in cell-based experiments. Since Vav3 significantly increases ligand-dependent AR
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Wu, Albert Ya-Po. "Molecular mechanism of cyclic nucleotide binding to the GAF domains of phosphodiesterases 2 and 5 /." Thesis, Connect to this title online; UW restricted, 2003. http://hdl.handle.net/1773/5012.

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Books on the topic "GYF domain"

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Bod-rang-skyong-ljongs ʼphel rgyas dang sgyur bcos u yon lhan khang. Gzhung lam gyi bdag dbang ham bzung dang gtor skyon btang bar skyin tshab (gun gsab) gron dngul bsdu phyogs kyi rnam grangs dang tshad gzhiʼi skor gyi brda tho: Bod ʼphel sgyur rin gong [2009] ang 651 pa. Bod-rang-skyong-ljongs ʼgrim ʼgrul thing gzhung lam do dam cus nas par du skrun, 2009.

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Naron, Josie. Columbia University's 'Gym Crow' and the Politics of Public Space: A Zine. the author, 2018.

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US GOVERNMENT. 21st Century Collection of National War College Military Image Clipart with nearly 20,000 Public Domain Images in JPG and GIF Formats: Army, Navy, Air ... More (Core Federal Information Series). Progressive Management, 2003.

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Book chapters on the topic "GYF domain"

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Freund, Christian. "The GYF Domain." In Modular Protein Domains. Wiley-VCH Verlag GmbH & Co. KGaA, 2005. http://dx.doi.org/10.1002/3527603611.ch5.

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Ryan, Robert P., Yvonne McCarthy, and J. Maxwell Dow. "The HD-GYP Domain and Cyclic Di-GMP Signaling." In The Second Messenger Cyclic Di-GMP. ASM Press, 2014. http://dx.doi.org/10.1128/9781555816667.ch5.

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Schultz, Joachim E., Torsten Dunkern, Elvira Gawlitta-Gorka, and Gabriele Sorg. "The GAF-Tandem Domain of Phosphodiesterase 5 as a Potential Drug Target." In Phosphodiesterases as Drug Targets. Springer Berlin Heidelberg, 2011. http://dx.doi.org/10.1007/978-3-642-17969-3_6.

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Gorski, Jerome L. "FGD1 and Faciogenital Dysplasia (Aarskog–Scott Syndrome)." In Inborn Errors Of Development. Oxford University PressNew York, NY, 2008. http://dx.doi.org/10.1093/oso/9780195306910.003.0145.

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Abstract FGD1 mutations result in faciogenital dysplasia (FGDY; Aarskog–Scott syndrome), an X-linked recessive multiple congenital anomaly syndrome. Skeletal anomalies dominate the FGDY phenotype. Cardinal clinical features include a characteristic set of craniofacial and skeletal anomalies, disproportionate acromelic short stature, delayed skeletal maturation, and urogenital malformations. FGD1 encodes a guanine nucleotide exchange factor (GEF) that speci’cally activates Cdc42, a Rho guanosine triphosphatase (GTPase) that is involved in cell signaling and the regulation of the actin cytoskele
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Semenza, Gregg L. "POU Domain Proteins." In Transcription Factors and Huinan Disease. Oxford University PressNew York, NY, 1998. http://dx.doi.org/10.1093/oso/9780195112399.003.0011.

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Abstract Homeodomain transcription factors play essential roles in controlling embryonic development in all animal species studied. Within the super family of homeodomain factors is the POU domain family, which was established on the basis of amino acid sequence homology between the transcription factors ;EITl/GHFl, OCTl, OCT2, and !JNC86 (hence the acronym POU, which is pronounced “pow”) (Herr et al., 1988). PITl/ GHF (Bodner et al., 1988; Ingraham et al., 1988) controls transcription of the growth hormone and other pituitary-specific genes, OCTl (Sturm et al., 1988) is ubiquitously expressed
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Martinez, Sergio E., Xiao-Bo Tang, Stewart Turley, Wim G. J. Hol, and Joseph A. Beavo. "Cyclic Nucleotide-Binding Phosphodiesterase and Cyclase GAF Domains." In Handbook of Cell Signaling. Elsevier, 2003. http://dx.doi.org/10.1016/b978-012124546-7/50568-4.

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Martinez, Sergio E., Clemens C. Heikaus, and Joseph A. Beavo. "Cyclic Nucleotide-Binding GAF Domains in Phosphodiesterases and Adenylyl Cyclases." In Handbook of Cell Signaling. Elsevier, 2010. http://dx.doi.org/10.1016/b978-0-12-374145-5.00187-x.

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Ahn, Jae-Hyeon, and Suk-Gwon Chang. "Managing Healthcare Organizations through the Knowledge Productivity Measurement." In Creating Knowledge-Based Healthcare Organizations. IGI Global, 2005. http://dx.doi.org/10.4018/978-1-59140-459-0.ch021.

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Understanding the contribution of knowledge to business performance is important for efficient resource allocations. It is very true for healthcare organizations. For the best utilization of scare medical expertise in the successful medical service delivery process, knowledge management will play a more important role in the future. In this paper, a performance-oriented knowledge management methodology or KP3 methodology was applied to the medical domain. Through actual data from the six OB/GYN specialty hospitals in Korea, the contribution of knowledge to performance was assessed. Specificall
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Fiege, Kerstin, Christian Twittenhoff, Kathrin Kwiatkowski, and Nicole Frankenberg-Dinkel. "Spectroscopic characterization of the heme binding (GAF) domain of two sensor kinases from Methanosarcina acetivorans." In Porphyrin Science by Women. WORLD SCIENTIFIC, 2021. http://dx.doi.org/10.1142/9789811223556_0113.

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El Rahman Hassoun, Abed, Ivana Ujević, Milad Fakhri, et al. "Biotoxins in the Mediterranean Sea: Lebanon as a Case Study." In Environmental Pollutants in the Mediterranean Sea: Recent Trends and Remediation Approaches. BENTHAM SCIENCE PUBLISHERS, 2023. http://dx.doi.org/10.2174/9789815179064123010003.

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Marine biotoxins are naturally occurring chemicals produced by toxic algae. They can be found in seawater and can accumulate in various marine organisms, such as commercial seafood. When contaminated seafood is consumed, these biotoxins can cause poisoning in humans, with varying health consequences depending on the type and amount of toxins. The proliferation of biotoxin-producing algae in the marine environment has dire socio-economic and environmental consequences due to the contamination of water and seafood. Due to the number of factors related to human pressures and climate change impact
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Conference papers on the topic "GYF domain"

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Gao, Rui, Ying Liu, Xuechun Yan, Jian Wang, and Jifeng Li. "Cooperative Signal Detection in Dynamic Environment Based on GOF in Frequency Domain." In 2023 3rd International Conference on Networking Systems of AI (INSAI). IEEE, 2023. https://doi.org/10.1109/insai60116.2023.00055.

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Bharadwaj, Varun R., Benjamin A. Miller, Vesna D. Novak, and Chao Jiang. "Learning Skill Training Schedules from Domain Experts in a Rehabilitation Gym Using Inverse Reinforcement Learning." In 2024 10th IEEE RAS/EMBS International Conference for Biomedical Robotics and Biomechatronics (BioRob). IEEE, 2024. http://dx.doi.org/10.1109/biorob60516.2024.10719705.

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Philippe, Maxime, Bruno Borgarino, Panagiotis Kotronis, and Guillaume Ducrozet. "An Integrated Approach for the Representation of Concrete Gravity Based Foundations for Offshore Wind Turbines." In ASME 2013 32nd International Conference on Ocean, Offshore and Arctic Engineering. American Society of Mechanical Engineers, 2013. http://dx.doi.org/10.1115/omae2013-10639.

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This paper describes a novel approach to efficiently simulate the structural dynamics of a concrete Gravity Based Foundation (GBF). In this time-domain analysis, the GBF is subjected to loads applied by the turbine, wave loads and the influence of the soil structure interaction is taken into account. Wind turbine loads are computed using the aeroelastic software FAST and expressed at the connection point between the turbine and the GBF Wave loads on the GBF are computed using a potential, nonlinear wave model. Nonlinear soil-structure interaction is modelled with the use of a macro-element spe
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Bhat, Sandesh G., Thomas G. Sugar, and Sangram Redkar. "Reconstruction of Ground Reaction Force Data Using Lyapunov Floquet Theory and Invariant Manifold Theory." In ASME 2020 International Design Engineering Technical Conferences and Computers and Information in Engineering Conference. American Society of Mechanical Engineers, 2020. http://dx.doi.org/10.1115/detc2020-22521.

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Abstract Ground Reaction Force (GRF) is an essential gait parameter. GRF analysis provides important information regarding various aspects of gait. GRF has been traditionally measured using bulky force plates within lab environments. There exist portable force sensing units, but their accuracy is wanting. Estimation of GRF has applications in remote wearable systems for rehabilitation, to measure performance in athletes, etc. This article explores a novel method for GRF estimation using the Lyapunov-Floquet (LF) and invariant manifold theory. We assume human gait to be a periodic motion withou
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Hage, Ilige S., Charbel Y. Seif, Ré-Mi Hage, and Ramsey F. Hamade. "A Verified Non-Linear Regression Model for Elastic Stiffness Estimates of Finite Composite Domains Considering Combined Effects of Volume Fractions, Shapes, Orientations, Locations, and Number of Multiple Inclusions." In ASME 2018 International Mechanical Engineering Congress and Exposition. American Society of Mechanical Engineers, 2018. http://dx.doi.org/10.1115/imece2018-86231.

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A non-linear regression model using SAS/STAT (JMP® software; Proc regression module) is developed for estimating the elastic stiffness of finite composite domains considering the combined effects of volume fractions, shapes, orientations, inclusion locations, and number of multiple inclusions. These estimates are compared to numerical solutions that utilized another developed homogenization methodology by the authors (dubbed the generalized stiffness formulation, GSF) to numerically determine the elastic stiffness tensor of a composite domain having multiple inclusions with various combination
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Chinimilli, Prudhvi Tej, Sean Wolfgang Wachtel, Panagiotis Polygerinos, and Wenlong Zhang. "Hysteresis Compensation for Ground Contact Force Measurement With Shoe-Embedded Air Pressure Sensors." In ASME 2016 Dynamic Systems and Control Conference. American Society of Mechanical Engineers, 2016. http://dx.doi.org/10.1115/dscc2016-9920.

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This paper reviews the design of smart shoes, a wearable device that measures ground contact forces (GCFs) for gait analysis. Smart shoes utilize four coils of silicone tubes adhered directly underneath the shoe insole at key points of interest. Air pressure sensors connect to each tube coil to measure pressure changes caused by compression. This paper presents static and dynamic calibration performed on each sensing coil to establish a model of internal pressure and the GCF. Based on the model, a phase lead filter is designed to account for the hysteresis effect and visco-elastic properties o
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Gandotra, Rahil, and Levi Perigo. "GPF: A Green Power Forwarding Technique for Energy-Efficient Network Operations." In 2nd International Conference on Machine Learning Techniques and Data Science (MLDS 2021). Academy and Industry Research Collaboration Center (AIRCC), 2021. http://dx.doi.org/10.5121/csit.2021.111808.

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The energy consumption of network infrastructures is increasing; therefore, research efforts designed to diminish this growing carbon footprint are necessary. Building on prior work, which determined a difference in the energy consumption of network hardware based on their forwarding configurations and developed a real-time network energy monitoring tool, this research proposes a novel technique to incorporate individual device energy efficiency into network routing decisions. A new routing metric and algorithm are presented to select the lowest-power, least-congested paths between destination
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Tinkl-Hennighausen, Fabian. "Leveraging the Benefits of Big Data and AI at Siemens: The Critical Role of Data Mesh and Domain Orientation." In Genetoberfest 2023. ScienceOpen, 2023. http://dx.doi.org/10.14293/gof.23.05.

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Uslan, Volkan, and Huseyin Seker. "Binding affinity prediction of S. cerevisiae 14-3-3 and GYF peptide-recognition domains using support vector regression." In 2016 38th Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC). IEEE, 2016. http://dx.doi.org/10.1109/embc.2016.7591469.

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Wymeersch, H., H. Steendam, and M. Moeneclaey. "Log-domain decoding of LDPC codes over GF(q)." In 2004 IEEE International Conference on Communications (IEEE Cat. No.04CH37577). IEEE, 2004. http://dx.doi.org/10.1109/icc.2004.1312606.

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Reports on the topic "GYF domain"

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Kibler, Amanda, René Pyatt, Jason Greenberg Motamedi, and Ozen Guven. Key Competencies in Linguistically and Culturally Sustaining Mentoring and Instruction for Clinically-based Grow-Your-Own Teacher Education Programs. Oregon State University, 2021. http://dx.doi.org/10.5399/osu/1147.

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Grow-Your-Own (GYO) Teacher Education programs that aim to diversify and strengthen the teacher workforce must provide high-quality learning experiences that support the success and retention of Black, Indigenous, and people of color (BIPOC) teacher candidates and bilingual teacher candidates. Such work requires a holistic and systematic approach to conceptualizing instruction and mentoring that is both linguistically and culturally sustaining. To guide this work in the Master of Arts in Teaching in Clinically Based Elementary program at Oregon State University’s College of Education, we condu
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