Relevant bibliographies by topics / Haplotype diversity

Contents

  1. Journal articles
  2. Dissertations / Theses
  3. Books
  4. Book chapters
  5. Conference papers
  6. Reports

Academic literature on the topic 'Haplotype diversity'

Author: Grafiati
Published: 4 June 2021
Last updated: 26 July 2025

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Journal articles on the topic "Haplotype diversity"

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Gariepy, Tara D., Dmitry L. Musolin, Aleksandra Konjević, et al. "Diversity and distribution of cytochrome oxidase I (COI) haplotypes of the brown marmorated stink bug, Halyomorpha halys Stål (Hemiptera, Pentatomidae), along the eastern front of its invasive range in Eurasia." NeoBiota 68 (September 15, 2021): 53–77. http://dx.doi.org/10.3897/neobiota.68.68915.

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The arrival, establishment and pest status of Halyomorpha halys in Europe and non-native countries in Asia have been well-documented, with thorough characterisation of the genetic diversity and occurrence of cytochrome oxidase I (COI) haplotypes in Switzerland, France, Hungary, Italy and Greece. However, a number of gaps exist in terms of the characterisation of the haplotype diversity and occurrence of H. halys along the invasion front that covers eastern Europe, western and central Asia. To contribute towards filling this gap, the COI haplotype diversity and distribution were investigated fo
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Gariepy, Tara D., Dmitry L. Musolin, Aleksandra Konjević, et al. "Diversity and distribution of cytochrome oxidase I (COI) haplotypes of the brown marmorated stink bug, Halyomorpha halys Stål (Hemiptera, Pentatomidae), along the eastern front of its invasive range in Eurasia." NeoBiota 68 (September 15, 2021): 53–77. https://doi.org/10.3897/neobiota.68.68915.

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The arrival, establishment and pest status of Halyomorpha halys in Europe and non-native countries in Asia have been well-documented, with thorough characterisation of the genetic diversity and occurrence of cytochrome oxidase I (COI) haplotypes in Switzerland, France, Hungary, Italy and Greece. However, a number of gaps exist in terms of the characterisation of the haplotype diversity and occurrence of H. halys along the invasion front that covers eastern Europe, western and central Asia. To contribute towards filling this gap, the COI haplotype diversity and distribution were investigated fo
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Kesik, Harun Kaya, Figen Celik, Seyma Gunyakti Kilinc, et al. "Genetic Diversity and Haplotype Analysis of Cattle Hydatid Cyst Isolates Using Mitochondrial Markers in Turkey." Pathogens 11, no. 5 (2022): 519. http://dx.doi.org/10.3390/pathogens11050519.

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Echinococcus granulosus sensu lato (s.l.) causes cystic echinococcosis in ungulates and humans. The current study was designed to find the genetic diversity and haplotypic profiles of hydatid cysts from the lungs of cattle in three provinces in eastern Turkey. Individual cyst isolates (n = 60) were collected from infected cattle lungs after slaughter and then samples were stored in ethanol (70%) until further use. From each isolate, total gDNA was extracted from the cysts’ germinal layers. A partial (875 bp) mt-CO1 gene was amplified by PCR and sequenced unidirectionally. The final size of the
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Sokolova, N. A., N. P. Korablev, P. N. Korablev, et al. "Mitochondrial Genetic Diversity of Eurasian Otter (<i>Lutra lutra</i>) from European Part of Russia and Transcaucasian Countries." Генетика 59, no. 7 (2023): 804–12. http://dx.doi.org/10.31857/s0016675823070111.

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In this study we examined mitochondrial DNA diversity of Eurasian otter from European part of Russia and Transcaucasian countries and compared it with other European populations. We used a fragment of mtDNA control region (255 bp) and also included previously detected haplotypes from NCBI. Six haplotypes were found in 75 samples from European part of Russia and Transcaucasian countries. Lut1 was the most common haplotype (62.1% of samples), Lut4 was detected in 17.6% of samples, other 4 haplotypes were newly detected. Haplotype diversity for European part of Russia and Transcaucasian countries
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Quan, Ke Thai, Thanh Nguyen Tuan, and Thi Thanh Pham Hien. "mtDNA haplotype network analysis: Exploring genetic relationships and diversity in dog haplogroups." GSC Biological and Pharmaceutical Sciences 24, no. 1 (2023): 224–32. https://doi.org/10.5281/zenodo.8265409.

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The genetic diversity and relationships of dog haplogroups were studied by analyzing the HV1 region of mitochondrial DNA. Previous studies have found six distinct haplogroups (A, B, C, D, E, and F) in dogs. Haplogroups A, B, and C were widely distributed, while haplogroups D, E, F were rare and distributed in restricted regions. In this study, HV1 sequences from global dog populations were collected, categorized into haplotypes, and used to construct haplotype networks. The results showed that haplogroup A was the most prevalent, comprising approximately 72.34% of dogs worldwide. Haplogroups A
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Arifin Zein, M. Syamsul, and Sri Sulandari. "Genetic diversity of Lombok chickens based on D-loop mitochondrial DNA sequences." Jurnal Ilmu Ternak dan Veteriner 13, no. 4 (2012): 308–14. https://doi.org/10.14334/jitv.v13i4.575.

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Mitochondrial DNA (mtDNA) displacement (D)-loop sequences were used to study the genetic diversity and relationship of Lombok chickens. A total of 45 individuals were sampled. The D-loop segment was PCR amplified and subsequently sequenced. The sequences of the 785 nucleotides were used for analysis. Twelve haplotypes were identified from 25 polymorphic sites with polymorphism between nucleotides 200 and 400 contributing to 80% of the variation. Fu’s Fs value was - 8.768 (all samples, P = 0), indicating high genetic diversity and population expansion, a conclusion supported by a neighbor–
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Anantaphruti, Malinee, Urusa Thaenkham, Teera Kusolsuk, et al. "Genetic Variation and Population Genetics ofTaenia saginatain North and Northeast Thailand in relation toTaenia asiatica." Journal of Parasitology Research 2013 (2013): 1–9. http://dx.doi.org/10.1155/2013/310605.

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Taenia saginatais the most common humanTaeniain Thailand. Bycox1sequences, 73 isolates from four localities in north and northeast were differentiated into 14 haplotypes, 11 variation sites and haplotype diversity of 0.683. Among 14 haplotypes, haplotype A was the major (52.1%), followed by haplotype B (21.9%). Clustering diagram of Thai and GenBank sequences indicated mixed phylogeny among localities. By MJ analysis, haplotype clustering relationships showed paired-stars-like network, having two main cores surrounded by minor haplotypes. Tajima’sDvalues were significantly negative inT. sagina
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Budhi Dharmayanthi, Anik, Achmad Muchsinin, Afriana Pulungan, and Moch Syamsul Arifin Zein. "Diversitas Genetika dan Identifikasi Jenis Kelamin Burung Pelikan (Pelecanus conspicillatus Temminck, 1824) di Penangkaran Taman Margasatwa Ragunan Jakarta." Jurnal Biologi Indonesia 17, no. 2 (2021): 105–14. http://dx.doi.org/10.47349/jbi/17022021/105.

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Pelicans (Pelecanus conspicillatus) is one of the wild species that have a widely distribution. This bird has been successfully bred in Ragunan Zoo, Jakarta. The indicator of inbreeding in the captive population is shown by the decrease of nucleotide diversity and number of haplotypes. The result of genetic diversity analysis using D-loop fragment sequences showed low genetic diversity with nucleotide diversity (p) = 0.00064 ± 0.00010 and haplotype diversity (Hd) = 0.532 ± 0.061 in Pelecanus conspicillatus populations in the Ragunan Zoo. However, negative Fu's Fs value (-3,246) indicates popul
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Koseniuk, Anna, and Ewa Słota. "Mitochondrial control region diversity in Polish sheep breeds." Archives Animal Breeding 59, no. 2 (2016): 227–33. http://dx.doi.org/10.5194/aab-59-227-2016.

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Abstract. The aim of the study was to determine the genetic variability of the Polish sheep breeds Świniarka, Wrzosówka, Pomorska, and Wielkopolska based on mitochondrial control region polymorphism. A comprehensive phylogenetic analysis and information about the genetic origin of the breeds were also obtained. The genetic variability of the breeds studied has been assessed based on the number of haplotypes, haplotype diversity, nucleotide diversity, the average number of nucleotide differences, the number of mutations, and phylogenetically informative sites. Sequence divergence between identi
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Ma, Peizhen, Chenxia Zuo, Shaojing Yan, et al. "Populations of the Invasive Mussel Mytella strigata in China Showed Lower Genetic Diversity in Autumn than in Spring." Biology 14, no. 1 (2024): 16. https://doi.org/10.3390/biology14010016.

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Native to tropical America, the charru mussel, Mytella strigata, has been spreading rapidly in the West Pacific Ocean, including the South China Sea. In order to study the adaptive evolution of M. strigata and examine the present status of invasion in China, the mitochondrial nad2 gene fragment was employed to analyze the genetic variations of seven populations sampled in both spring and autumn 2023. Results showed that all the populations had high haplotype diversity (&gt;0.5) and low nucleotide diversity (&lt;0.005), suggesting the ongoing rapid expansion following a genetic bottleneck. The
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Dissertations / Theses on the topic "Haplotype diversity"

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Rogers, Emma Jayne. "Haplotype evolution and human genetic diversity." Thesis, University of Nottingham, 2000. http://ethos.bl.uk/OrderDetails.do?uin=uk.bl.ethos.342507.

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Xu, Xiao. "Human alpha defensin CNV haplotype diversity." Thesis, University of Nottingham, 2018. http://eprints.nottingham.ac.uk/51262/.

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Humans have highly variable number of alpha defensin genes, with between 3-16 diploid copies. Alpha-defensin genes have important roles in human innate immunity and diseases. Recently, GWAS studies reported this locus associated with IgA nephropathy and periodontitis. However, the underlying mechanism of association is not clear. In this Ph.D. thesis, human alpha defensin CNV flanking haplotype diversity in global populations was studied and the association between diseases and haplotype classes was discussed. Then a novo method to detect variants from inside the DEFA1A3 CNV was developed and
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McGee, Kate. "Evolutionary Factors Shaping Haplotype and Nucleotide Diversity in Humans and Malaria." NCSU, 2008. http://www.lib.ncsu.edu/theses/available/etd-01102008-104027/.

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Cheaper and more rapid DNA sequencing has led to the accumulation of large amounts of genetic data and has fueled the development of new methods to analyze this data. Using population genetics theory and computational methods we can explore the evolutionary forces that shape genetic variation within and among populations of humans and malaria parasites. Demographic events such as population size change influence current patterns of genetic variation. Accounting for the demographic history of a population is critical in the interpretation of population genetic analyses, particularly in detectin
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Fletcher, Benjamin. "Haplotype diversity at the CYP2D6 locus : human demography, evolution and disease susceptibility." Thesis, University College London (University of London), 2003. http://ethos.bl.uk/OrderDetails.do?uin=uk.bl.ethos.404668.

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Dicks, Kara Leanne. "Unravelling major histocompatibility complex diversity in the Soay sheep of St Kilda." Thesis, University of Edinburgh, 2018. http://hdl.handle.net/1842/31412.

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The major histocompatibility complex (MHC) is one of the most variable regions in the vertebrate genome. Many genes within the MHC play important roles in the development of an immune response, including the response to pathogens, by presenting pathogen fragments to T cells. Pathogen-mediated balancing selection is thought to be important in maintaining the high levels of allelic variation at these loci, though the precise mechanism remains unclear. The number of studies of MHC diversity in non-model organisms has increased dramatically in recent years as genotype data have become cheaper and
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Mwema, Hadija Saidi. "Forensic identification of six of Tanzanian populations using the extended haplotype markers." Thesis, University of the Western Cape, 2011. http://etd.uwc.ac.za/index.php?module=etd&action=viewtitle&id=gen8Srv25Nme4_2349_1325671867.

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The aim of the present study was to evaluate the power of discrimination and genetic (diversity) parameters in the Y chromosome extended haploytpe markers in populations of Tanzania for forensic and populations studies. Eleven Y chromosome extended haplotype markers were selected for this study, these includes Minimal haplotypes markers i.e. DYS19, DYS390, DYS391, DYS392, DYS393, DYS385a/b, DYS389I/II and two additional markers DYS438 and DYS439. Six populations of Tanzania were investigated under this study. These populations were selected based on the language family categories<br>Niger Cong
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Cantet, Mélissa. "Variation phénotypique de la résistance quantitative à Phytophthora capsici dans la diversité naturelle du piment, et diversité moléculaire et profil d'évolution du QTL majeur Pc5.1." Thesis, Montpellier, SupAgro, 2013. http://www.theses.fr/2013NSAM0006.

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L'utilisation de variétés présentant des résistances quantitatives polygéniques est une pratique respectueuse de l'environnement et potentiellement durable pour lutter contre les bioagresseurs. Les résistances quantitatives sont cependant mal connues et encore peu exploitées. Via l'étude de l'interaction Capsicum spp. / Phytophthora capsici, les objectifs sont de (i) caractériser la diversité naturelle de l'hôte pour le phénotype quantitatif de résistance, (ii) décrire la diversité au QTL Pc5.1, déterminant majeur de la résistance, conservé chez les géniteurs et efficace à large spectre, et (i
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Tano, Stina. "Seaweed in the tropical seascape : Importance, problems and potential." Doctoral thesis, Stockholms universitet, Institutionen för ekologi, miljö och botanik, 2016. http://urn.kb.se/resolve?urn=urn:nbn:se:su:diva-129256.

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The increasing demand for seaweed extracts has led to the introduction of non-native seaweeds for farming purposes in many tropical regions. Such intentional introductions can lead to spread of non-native seaweeds from farming areas, which can become established in and alter the dynamics of the recipient ecosystems. While tropical seaweeds are of great interest for aquaculture, and have received much attention as pests in the coral reef literature, little is known about the problems and potential of natural populations, or the role of natural seaweed beds in the tropical seascape. This thesis
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Perkins, Christopher J. "Ecology of Isolated Greater Sage-Grouse Populations Inhabiting the Wildcat Knolls and Horn Mountain, Southcentral Utah." DigitalCommons@USU, 2010. https://digitalcommons.usu.edu/etd/694.

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Greater sage-grouse (Centrocercus urophasianus) currently inhabit about 56% of pre-settlement distribution of potential habitat. In 2005, the Castle Country Adaptive Resources Management Local Working Group (CaCoARM) was formed to address concerns regarding local sage-grouse populations in Carbon and Emery counties. In 2006-2007, CaCoARM identified the Wildcat Knolls and Horn Mountain as areas of special concern for greater sage-grouse conservation. Both sites selected by the group were inhabited by what appeared to be small isolated sage-grouse populations. Factors limiting small isolated
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Cloete, Kevin Wesley. "Development of Y-STR genotyping systems suitable for sexual assault cases in South Africa." Thesis, University of the Western Cape, 2010. http://etd.uwc.ac.za/usrfiles/modules/etd/docs/etd_gen8Srv25Nme4_4315_1274816776.pdf.

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Books on the topic "Haplotype diversity"

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Kay, Chris, Emily Fisher, and Michael R. Hayden. Epidemiology. Oxford University Press, 2014. http://dx.doi.org/10.1093/med/9780199929146.003.0007.

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The prevalence and persistence of Huntington’s disease (HD) is crucially informed by the causative mutation. Diagnostic and predictive testing has enabled a new era of epidemiologic study of HD, whereby only those who carry an expanded CAG repeat are included in such measures. In Western populations, estimated prevalence of the disease is higher following the introduction of genetic testing, and prevalence may also be increasing in absolute terms. There are worldwide differences in the prevalence of HD by ethnicity and population, which may be accounted for in part by genetic diversity of the
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Crawford, Michael, and Rohina C. Rubicz. Molecular Genetic Evidence from Contemporary Populations for the Origins of Native North Americans. Edited by Max Friesen and Owen Mason. Oxford University Press, 2016. http://dx.doi.org/10.1093/oxfordhb/9780199766956.013.4.

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An overview of the current molecular genetic evidence for the origins of North American populations is presented, including specific examples from the authors’ work with the Aleutian Island inhabitants. Shared mitochondrial DNA and Y-chromosome DNA markers among Siberians and Native Americans point to a Pleistocene migration from Siberia into the Americas via Beringia. There was likely a later migration from Siberia to Alaska, based on the analysis of whole-genome sequence data from a Greenland Paleoeskimo that clusters this individual with Siberian populations. Coalescence date estimates for
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Book chapters on the topic "Haplotype diversity"

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Zhang, Xueyong, and Rudi Appels. "Genome Sequence-Based Features of Wheat Genetic Diversity." In Compendium of Plant Genomes. Springer International Publishing, 2023. http://dx.doi.org/10.1007/978-3-031-38294-9_6.

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AbstractCommon wheat is a hexaploid species crop that is widely recognized as an important staple food crop. The establishment of a gold standard reference genome sequences of the well-studied CHINESE SPRING, and its progenitors (including Triticum turgidum ssp. dicoccoides accession Zavitan, Triticum durum accession Svevo, Triticum urartu, Aegilops tauschii), in the last 5 years has dramatically promoted our understanding of wheat genome diversity and evolution through the resequencing of collections of wheat and its progenitors. In this chapter, we review progress in the analysis and interpr
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Suzuki, Koichi, Misa Iwata, Tatsushige Fukunaga, et al. "Novel Polymorphisms in the Coding Sequence of the Coagulation Factor XIII A-Subunit and their Haplotype Diversity." In 16th Congress of the International Society for Forensic Haemogenetics (Internationale Gesellschaft für forensische Hämogenetik e.V.), Santiago de Compostela, 12–16 September 1995. Springer Berlin Heidelberg, 1996. http://dx.doi.org/10.1007/978-3-642-80029-0_119.

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Takahashi, T. C., H. T. Kao, J. C. Tang, P. Gregersen, J. Silver, and C. Y. Wang. "Molecular Diversity of HLA-DRw6 Haplotypes." In Immunobiology of HLA. Springer Berlin Heidelberg, 1989. http://dx.doi.org/10.1007/978-3-662-39946-0_67.

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Middleton, D., F. Gonzalez-Galarza, A. Meenagh, and P. A. Gourraud. "Diversity of KIR Genes, Alleles and Haplotypes." In Natural Killer Cells. Springer Berlin Heidelberg, 2009. http://dx.doi.org/10.1007/978-3-642-02309-5_3.

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Fauchet, R., G. M. TH Schreuder, S. G. E. Marsh, and D. Charron. "HLA Diversity of Alleles and Haplotypes. The Contribution of the 12th International Histocompatibility Workshop." In Immunogenetics: Advances and Education. Springer Netherlands, 1997. http://dx.doi.org/10.1007/978-94-011-5486-4_4.

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Vijayan, Roshni, Asish I. Edakkalathur, and Jyothilekshmi S. "Multi Parental Crop Breeding – Improving Crop Yield and Stress Tolerance." In Genetic Horizons: Advancement in Plant Breeding. Iterative International Publishers, Selfypage Developers Pvt Ltd, 2025. https://doi.org/10.58532/nbennurghch3.

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Multi Parental Populations (MPPs) are transformative tools in plant breeding, offering enhanced genetic diversity and mapping precision compared to biparental populations. Key designs, such as Nested Association Mapping (NAM) and Multi Parent Advanced Generation Intercrosses (MAGIC), allow for the dissection of complex traits like yield, adaptation, stress tolerance, etc. NAM population involves a common founder parent crossed with diverse donor lines, combining linkage mapping and genome-wide association mapping (GWAS) to detect rare QTLs with improved resolution. MAGIC populations, created t
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J., Stephen, and Haja N. "SNPpattern: A Genetic Tool to Derive Haplotype Blocks and Measure Genomic Diversity in Populations Using SNP Genotypes." In Bioinformatics - Trends and Methodologies. InTech, 2011. http://dx.doi.org/10.5772/22292.

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Teng, Yue, Yan Yu, Yuan Jin, Xiaoping An, and Dan Feng. "A Genomic Landscape of Haplotype Diversity and Signatures of Phylogeographic Distribution in Zaire Ebolavirus during the 2014 EVD Epidemic." In Ebola. InTech, 2016. http://dx.doi.org/10.5772/63247.

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Augusto Becerra Lopez-Lavalle, Luis, Adriana Bohorquez-Chaux, and Xiaofei Zhang. "Identification of Cassava Varieties in Ex-Situ Collections and Global Farmer’s Fields: An Update from 1990 to 2020." In Cassava - Biology, Production, and Use. IntechOpen, 2021. http://dx.doi.org/10.5772/intechopen.99110.

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The identification of cassava cultivars is important for understanding the crop’s production system, enabling crop improvement practitioners to design and deliver tailored solutions with which farmers can secure high yields and sustainable production. Across the lowland tropics today, a large number improved varieties and landraces of cassava are under cultivation, making it inefficient for breeders and geneticists to set improvement goals for the crop. The identification and characterization of cassava genotypes is currently based on either morphological characters or molecular features. The
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Gómez, R., T. G. Schurr, and M. A. Meraz-Ríos. "Diversity of Mexican Paternal Lineages Reflects Evidence of Migration and 500 Years of Admixture." In Human Migration. Oxford University Press, 2021. http://dx.doi.org/10.1093/oso/9780190945961.003.0012.

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This study examined Y-chromosome variation in 1614 mestizo Mexican males from different geographic regions to delineate the indigenous and colonial history of Mexico. The findings reveal a great diversity of paternal lineages within Mexican males, as well as a limited number of shared haplotypes among them. Native American haplogroups Q-L54 and Q-M3 were observed at varying frequencies in mestizos, and haplogroups of African origin were found at very low frequencies. On the other hand, we noted a significant genetic contribution from Spanish populations, in particular those from the Andalusian
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Conference papers on the topic "Haplotype diversity"

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Topfer, Armin, Francesca Di Giallonardo, Karin J. Metzner, Huldrych F. Gunthard, and Niko Beerenwinkel. "Probing of viral diversity by global haplotype prediction." In 2013 IEEE 3rd International Conference on Computational Advances in Bio and Medical Sciences (ICCABS). IEEE, 2013. http://dx.doi.org/10.1109/iccabs.2013.6629231.

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AVI-ITZHAK, HADAR I., XIAOPING SU, and FRANCISCO M. DE LA VEGA. "SELECTION OF MINIMUM SUBSETS OF SINGLE NUCLEOTIDE POLYMORPHISMS TO CAPTURE HAPLOTYPE BLOCK DIVERSITY." In Proceedings of the Pacific Symposium. WORLD SCIENTIFIC, 2002. http://dx.doi.org/10.1142/9789812776303_0044.

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Hancock, B., M. Radovich, N. Kassem, D. Mi, T. Skaar, and B. Schneider. "Resequencing of the Vascular Endothelial Growth Factor Promoter Reveals Haplotype Structure and Functional Diversity." In Abstracts: Thirty-Second Annual CTRC‐AACR San Antonio Breast Cancer Symposium‐‐ Dec 10‐13, 2009; San Antonio, TX. American Association for Cancer Research, 2009. http://dx.doi.org/10.1158/0008-5472.sabcs-09-2122.

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Кошкина, О. А., Т. Е. Денискова, А. Д. Соловьева, and Н. А. Зиновьева. "PHYLOGENETIC ANALYSIS OF RUSSIAN LOCAL SHEEP BREEDS BASED ON THE POLYMORPHISM OF THE MITOCHONDRIAL DNA CYTOCHROME B GENE." In Биотехнология в растениеводстве, животноводстве и сельскохозяйственной микробиологии. Crossref, 2021. http://dx.doi.org/10.48397/arriab.2021.21.xxi.030.

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Генетическое разнообразие популяций сельскохозяйственных животных играет жизненно важную роль в формировании признаков, ответственных за улучшение, выживание и адаптацию биологического вида [1]. Изучение генетической изменчивости современных аборигенных пород овец позволит накопить знания об их происхождении и расселении, а также понять влияние человеческой деятельности на овец с момента одомашнивания, что является актуальной задачей в современном мире. Одним из эффективных подходов к оценке генетического разнообразия является исследование митохондриальной ДНК (мтДНК). Филогенетический анализ
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Prokhorova, E. E., and R. R. Usmanova. "GENETIC POLYMORPHISM OF SNAILS SUCCINEA PUTRIS (GASTROPODA, PULMONATA)." In V International Scientific Conference CONCEPTUAL AND APPLIED ASPECTS OF INVERTEBRATE SCIENTIFIC RESEARCH AND BIOLOGICAL EDUCATION. Tomsk State University Press, 2020. http://dx.doi.org/10.17223/978-5-94621-931-0-2020-33.

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Genotypic diversity of snails Succinea putris L. (Linnaeus, 1758) collected in the north-west of Russia and in the Republic of Belarus was analysed. Homology between the nucleotide sequences of snails from different population made up 100% by the nucleotide sequence of ITS1-5.8S-ITS2 region of rDNA. Genetic variability based on mitochondrial markers was insignificant. Average genetic distances between samples made up 0,009 for СOI gene loci and 0.008 for CytB gene loci. Was found ten haplotypes of the mitochondrial gene CytB and nine haplotypes of the mitochondrial gene СOI. Perhaps the geneti
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Đuretanović, Simona, Tijana Veličković, Aleksandra Milošković, et al. "PRELIMINARY RESULTS REGARDING PHYLOGENY OF THE NOBLE CRAYFISH (DECAPODA, ASTACIDAE, „ASTACUS ASTACUS“) IN SERBIA." In 1st INTERNATIONAL Conference on Chemo and BioInformatics. Institute for Information Technologies, University of Kragujevac,, 2021. http://dx.doi.org/10.46793/iccbi21.222dj.

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The noble crayfish is one of the three autochthonous species that inhabit the freshwater ecosystems of Serbia, along with stone and Danube crayfish. The noble crayfish has a complex historical and genetic status shaped by geological events, habitat loss, pollution, translocations, and reintroductions of both autochthonous and allochthonous crayfish species. That led to the disruption of the species genetic structure, mixing, and loss of populations across Europe. According to recent data, its populations in the freshwater ecosystems of Serbia are significantly reduced, so it has the status of
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Giovannoni, Laurianne, Sergio Toffanelli, Alessandra Falchi, et al. "Diversity of ß-Globin Haplotypes Associated with P-Thalassemia in Corsica (France)." In 2006 First International Symposium on Environment Identities and Mediterranean Area. IEEE, 2006. http://dx.doi.org/10.1109/iseima.2006.344997.

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"Alleles and haplotypes diversity of HLA-A, -B, -C, -DRB1, and -DQB1 genes in Russia." In Bioinformatics of Genome Regulation and Structure/Systems Biology (BGRS/SB-2022) :. Institute of Cytology and Genetics, the Siberian Branch of the Russian Academy of Sciences, 2022. http://dx.doi.org/10.18699/sbb-2022-212.

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A.Sh, Alimova, Vorobieva A.V., Gaidamachenko V.N., Golovinov I.V., Nebesikhina N.A., and Abrosimova E.B. "CHARACTERIZATION OF THE GENETIC DIVERSITY OF THE GREAT STURGEON (HUSO HUSO) IN THE AZOV-BLACK SEA BASYN BASED ON THE IDENTIFICATION OF MITOCHONDRIAL HAPLOTYPES." In II INTERNATIONAL SCIENTIFIC AND PRACTICAL CONFERENCE "DEVELOPMENT AND MODERN PROBLEMS OF AQUACULTURE" ("AQUACULTURE 2022" CONFERENCE). DSTU-Print, 2022. http://dx.doi.org/10.23947/aquaculture.2022.12-14.

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The article presents a study of genetic polymorphism of the natural population of the great sturgeon of the Azov-Black Sea basin using the analysis of the control region of mitochondrial DNA (D-loop) by capillary electrophoresis with the detection of a fluorescence signal. In the study, it was found that the two studied samples of the populations of the Black and Azov Seas do not have significant genetic differentiation among themselves (P&lt;0.5). However, the overall genetic diversity in the natural population of the Azov-Black Sea basin in the period 2001-2010 was at a relatively high level
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Perera, Nirmalee, Manura Weerasinghe, Jagath Kasturiarachchi, and Priyanga Ranasinghe. "In Silico Analysis of the Diversity of DPYD Gene Variants Affecting Fluoropyrimidine Toxicity: A Comparison of South Asians with Other World Populations." In SLIIT INTERNATIONAL CONFERENCE ON ADVANCEMENTS IN SCIENCES AND HUMANITIES. Faculty of Humanities & Sciences, SLIIT, 2024. https://doi.org/10.54389/ehcv8962.

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Fluoropyrimidine (FP) chemotherapy drug is utilized to treat colon, head, neck and breast cancers. Apart from its effectiveness, toxicity is a limitation. DPD (dihydropyrimidine dehydrogenase) enzyme, which aids in the FP metabolism is produced by the highly polymorphic DPYD gene. Mutations in the DPYD gene cause the deficiency or non-functionality of the DPD enzyme which varies among different populations. This research aimed to compare allele frequencies of common DPYD gene variants of South Asians (SAS) such as DPYD*2A(rs3918290), DPYD*9(rs1801265), DPYD*5, rs2297595, DPYD*6, rs17376848, rs
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Reports on the topic "Haplotype diversity"

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Su, Hailin, James E. Koltes, Mahdi Saatchi, Jungjae Lee, Rohan L. Fernando, and Dorian J. Garrick. Characterizing Haplotype Diversity in Ten US Beef Cattle Breeds. Iowa State University, 2014. http://dx.doi.org/10.31274/ans_air-180814-1132.

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พุทธพรทิพย์, จตุรงค์. งานวิจัยเรื่อง การวิเคราะห์ความหลากหลายพันธุกรรมและความสามารถในการกระตุ้น ระบบภูมิคุ้มกันของโปรตีนทั้ง 12 ชนิดในกลุ่มโปรตีนบนผิวเมอร์โรซอยต์ชนิดที่ 3 ของพลาสโมเดียมไวแวกซ์จากผู้ติดเชื้อมาลาเรียในประเทศไทย. จุฬาลงกรณ์มหาวิทยาลัย, 2019. https://doi.org/10.58837/chula.res.2019.13.

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โปรตีนบนผิวของระยะเมอร์โรซอยต์ชนิดที่ 3 ของเชื้อมาลาเรีย (MSP3) เป็นโปรตีนที่ความสำคัญในการนำมาใช้เป็นองค์ประกอบในการพัฒนาวัคซีนป้องกันโรคมาลาเรีย MSP3 ของ Plasmodium vivax ถูกสร้างขึ้นจากกลุ่มของยีน 12 ชนิดทีมีชื่อเรียงตามตัวอักษรคือ PvMSP-3A ถึง PvMSP-3I โครงสร้างของ PvMSP3 family ประกอบไปด้วยบริเวณที่มีความคล้ายกันในบริเวณ N- และ C-termini โดยส่วนกลางของโปรตีนบางชนิดประกอบด้วยบริเวณที่มีกรดอะมิโน alanine เป็นองค์ประกอบจำนวนมากในระยะห่างที่ชัดเจน ทำให้โปรตีนเหล่านี้มีโครงสร้างเป็นขดเกลียวหลายรอบ (coiled-coil motif) วัตถุประสงค์ของการศึกษาครั้งนี้เพื่อศึกษาความหลากหลายของกลุ่มยีน PvMSP3 famil
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วิเวกแว่ว, อัมพร, та วิเชฏฐ์ คนซื่อ. การแปรผันทางพันธุกรรมและการประเมินความเป็นไปได้ในการผสมต่างสายพันธุ์ระหว่างอึ่งน้ำเต้า (Microhyla fissipes) อึ่งข้างดำ (M. heymonsi) และอึ่งลายเลอะ (M. butleri) โดยใช้ลำดับนิวคลีโอไทด์ของยีนบางส่วนของไมโทคอนเดรียลดีเอ็นเอในการตรวจสอบในพื้นที่ อพ.สธ. : รายงานวิจัย. จุฬาลงกรณ์มหาวิทยาลัย, 2012. https://doi.org/10.58837/chula.res.2012.43.

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การผสมข้ามสายพันธุ์ (hybridization) เป็นการผสมพันธุ์ระหว่างสิ่งมีชีวิตที่มีความใกล้ชิดกันเชิงวิวัฒนาการที่มีโครงสร้างทางพันธุกรรมของประชากรหรือสปีชีส์ที่แตกต่างกัน ทั้งนี้ลูกผสม (hybrids) ที่เกิดขึ้นอาจทำให้เกิดการถ่ายเทเคลื่อนย้ายของยีน (gene flow) ระหว่างประชากรหรือสปีชีส์ได้หากลูกผสมดังกล่าวสามารถอยู่รอดและสืบพันธุ์ได้ ซึ่งสามารถตรวจสอบได้โดยใช้เทคนิคทางด้านชีวโมเลกุล อึ่งน้ำเต้า (Microhyla fissipes) อึ่งข้างดำ (M.heymonsi) และอึ่งลายเลอะ (M.butleri) จัดเป็นสัตว์สะเทินน้ำสะเทินบกที่อยู่ในสกุลเดียวกัน มีขนาดลำตัวใกล้เคียงกันและมีการกระจายอยู่ในทุกภาคของประเทศไทย จากการสำรวจเบื้องต้นพบว่าอึ่ง
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Weng, Ziqing, Anna Wolc, Jesus Arango, et al. Estimation of Haplotype Diversity and Recombination Rate on Chromosomes 5 and 15 in Layer Chickens. Iowa State University, 2015. http://dx.doi.org/10.31274/ans_air-180814-1322.

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Michelmore, Richard, Eviatar Nevo, Abraham Korol, and Tzion Fahima. Genetic Diversity at Resistance Gene Clusters in Wild Populations of Lactuca. United States Department of Agriculture, 2000. http://dx.doi.org/10.32747/2000.7573075.bard.

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Genetic resistance is often the least expensive, most effective, and ecologically-sound method of disease control. It is becoming apparent that plant genomes contain large numbers of disease resistance genes. However, the numbers of different resistance specificities within a genepool and the genetic mechanisms generating diversity are poorly understood. Our objectives were to characterize diversity in clusters of resistance genes in wild progenitors of cultivated lettuce in Israel and California in comparison to diversity within cultivated lettuce, and to determine the extent of gene flow, re
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Sherman, Amir, Rebecca Grumet, Ron Ophir, Nurit Katzir, and Yiqun Weng. Whole genome approach for genetic analysis in cucumber: Fruit size as a test case. United States Department of Agriculture, 2013. http://dx.doi.org/10.32747/2013.7594399.bard.

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The Cucurbitaceae family includes a broad array of economically and nutritionally important crop species that are consumed as vegetables, staple starches and desserts. Fruit of these species, and types within species, exhibit extensive diversity as evidenced by variation in size, shape, color, flavor, and others. Fruit size and shape are critical quality determinants that delineate uses and market classes and are key traits under selection in breeding programs. However, the underlying genetic bases for variation in fruit size remain to be determined. A few species the Cucurbitaceae family were
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Fahima, Tzion, and Jorge Dubcovsky. Map-based cloning of the novel stripe rust resistance gene YrG303 and its use to engineer 1B chromosome with multiple beneficial traits. United States Department of Agriculture, 2013. http://dx.doi.org/10.32747/2013.7598147.bard.

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Research problem: Bread wheat (Triticumaestivum) provides approximately 20% of the calories and proteins consumed by humankind. As the world population continues to increase, it is necessary to improve wheat yields, increase grain quality, and minimize the losses produced by biotic and abiotic stresses. Stripe rust, caused by Pucciniastriiformisf. sp. tritici(Pst), is one of the most destructive diseases of wheat. The new pathogen races are more virulent and aggressive than previous ones and have produced large economic losses. A rich source for stripe-rust resistance genes (Yr) was found in w
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