Academic literature on the topic 'Herbarium data'

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Journal articles on the topic "Herbarium data"

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Novikov, Andriy. "Digitization of natural collections – the way to immortality." Biology: From a Molecule Up to the Biosphere 1 (November 27, 2019): 12–14. https://doi.org/10.5281/zenodo.3594474.

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It is even hard to estimate general circumscription of natural history collections. Comprehensive database GRSciColl lists 1,095 collections from 7,522 registered institutions across the world (Schindel et al. 2016). From 1.2 to 3 billions of specimens are suggested to be preserved in those collections (Ariño 2010,Vollmar et al. 2010). If follow another database, Index Herbariorum, 3,095 herbaria are registered for today in the world, and contain about 390 million specimens (Thiers 2019). However even this quite narrow fetch limited by plants is far away from real state of things. In 20
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Klazenga, Niels. "The Australasian Virtual Herbarium (AVH) and the Changing Role of Herbaria." Biodiversity Information Science and Standards 2 (June 15, 2018): e25866. https://doi.org/10.3897/biss.2.25866.

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Australia's Virtual Herbarium (AVH) was created in 2001 and developed between 2001 and 2006 with the databasing of the label data of specimens from the Australian Commonwealth, state and territory herbaria. The success of AVH ultimately led to funding for the Atlas of Living Australia (ALA) and in October 2012 AVH was re-launched as part of the ALA infrastructure (http://avh.chah.org.au). Since 2012, some university herbaria have also joined AVH and in June 2017 the New Zealand Virtual Herbarium (NZVH) was integrated, giving rise to the Australasian Virtual Herbarium. The AVH currently holds a
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Tavares, Vasques Diego, Atsushi Ebihara, Atsuko Takano, Hiroshi Ikeda, and Atsushi Kawakita. "History and Importance of the Fern Herbarium Collections in Japan, With Focus on the University of Tokyo Herbarium." Biodiversity Information Science and Standards 8 (October 3, 2024): e138439. https://doi.org/10.3897/biss.8.138439.

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HERBARIUM PLANT SPECIMENS AND THEIR HERBARIUM HOLDINGS Natural history collections around the globe represent a dormant source of taxonomic and biogeographic information, as it is estimated that one to three billion specimens are included in such collections (Soberon 1999; Ariño 2010). In the case of botanical collections, the worldwide distribution of specimens across herbaria is often uneven and biased by colonialism, with most specimens housed in the global North, and in many cases resulting in a reverse latitudinal relationship between plant diversity present in nature and the location of
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Ainsa, Alice, Sophie Pamerlon, Anne-Sophie Archambeau, Rémi Beauvieux, Raoufou Radji, and Hervé Chevillotte. "Regional Data Platform of West and Central African Herbaria." Biodiversity Information Science and Standards 7 (September 7, 2023): e112180. https://doi.org/10.3897/biss.7.112180.

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In April 2021, a Biodiversity Information for Development (BID) project was launched to deliver a regional data platform of West and Central African herbaria, which just concluded in April 2023. A dataset containing 168,545 herbarium specimens from 6 different countries: Togo, Gabon, Ivory Coast, Benin, Guinea Conakry and Cameroon, is now visible on the Global Biodiversity Information Facility (GBIF) website and will be regularly updated. A checklist datatset (Radji 2023a) and an occurrence dataset (Radji 2023b) obtained from herbarium parts are also available on GBIF.In addition, a Living Atl
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Couceiro, Douglas de Moraes, Elvira Maria Mar de Souza, Chirley Gonçalves Silva, et al. "Revision of Hymenochaetaceae Fungi (Agaricomycetes, Basidiomycota) deposited in Amazonian Herbaria." OBSERVATÓRIO DE LA ECONOMÍA LATINOAMERICANA 23, no. 5 (2025): e9786. https://doi.org/10.55905/oelv23n5-006.

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A total of 127 specimens of Hymenochaetaceae were identified in Amazonian Herbaria, with 104 from the Fungal Collection of the INPA Herbarium, 14 from the UFAC Herbarium, and nine from the UFOPA Herbarium. The reviewed exsiccates correspond to five genera and 12 species, with the first record of Coltricia perennis (L.) Murrill, C. velutina Baltazar & Gibertoni and Fomitiporia apiahyna (Speg.) Robledo, Decock & Rajchenb for the state of Amazonas, and Hymenochaete luteobadia (Fr.) Höhn. & Litsch. for the states of Acre, Amazonas and Roraima. Herbariums are a reservoir of species not
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Nazaire, Mare. "Integrating Data Quality Feedback: a Data Provider's Perspective." Biodiversity Information Science and Standards 2 (June 13, 2018): e26007. https://doi.org/10.3897/biss.2.26007.

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The Herbarium of Rancho Santa Ana Botanic Garden [RSA-POM] is the third largest herbarium in California and consists of >1.2 million specimens, of which ~50% are digitized. As a data provider, RSA-POM publishes its data with several aggregators, including the Consortium of California Herbaria, JSTOR, Symbiota (which is subsequently pulled into iDigBio and GBIF), as well as its own local webportal. Each submission of data needs to be prepared and formatted according to the aggregator's specifications for publication. Feedback on data quality (DQ) ranges from an individual user (often only a
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Vaughan, Alison, and Niels Klazenga. "Using Collections in Specify to Manage Incoming Exchange Data." Biodiversity Information Science and Standards 8 (September 25, 2024): e137801. https://doi.org/10.3897/biss.8.137801.

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The Specify collection management system has been designed to accommodate data from multidisciplinary collecting institutions through a series of administrative units arranged in a hierarchical structure (Specify Collections Consortium 2024). Within the parent Institution, there can be multiple Divisions; within the parent Division there can be multiple Disciplines; and within the parent Discipline there can be multiple Collections (Fig. 1).While these administrative units were originally intended to house distinct collections within an institution, the model allows for flexibility and creativ
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Barbosa, Maria Regina de V., Ana Odete Vieira, Ariane Peixoto, et al. "Building Networks to Promote Knowledge of Brazil's Biodiversity: The experience of the INCT - Virtual Herbarium." Biodiversity Information Science and Standards 6 (August 23, 2022): e91462. https://doi.org/10.3897/biss.6.91462.

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The Botanical Society of Brazil (SBB) for many years discussed the need to improve the nation's herbarium collections, by providing training and educating botanists as specialists in plant and fungal taxonomy. It was in this context that an audacious project was developed, which envisaged personnel training for studies in plant and fungal diversity (particularly taxonomy and curation of collections) and the organization and online delivery of the label data of plant and fungal specimens from the herbaria of Brazil - the National Institute of Science and Technology (INCT) Virtual Herbarium.The
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Thiers, Barbara, Roslyn Rivas, and Elizabeth Kiernan. "Using Data From Index Herbariorum to Assess Threats to the World’s Herbaria." Biodiversity Information Science and Standards 2 (June 15, 2018): e26440. http://dx.doi.org/10.3897/biss.2.26440.

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During the past few years, natural disasters, political or social unrest and institutional actions have imperiled herbaria. The question has been raised multiple times whether or not the data gathered about herbaria in Index Herbariorum could be used to predict which herbaria are at the greatest risk. Armed with such knowledge curators and the greater collections community might be in a better position to safeguard those herbaria. To explore the feasibility of using Index Herbariorum data in this way, we have identified a set of specific threats and then scored herbaria according to their susc
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Thiers, Barbara, Roslyn Rivas, and Elizabeth Kiernan. "Using Data From Index Herbariorum to Assess Threats to the World's Herbaria." Biodiversity Information Science and Standards 2 (June 15, 2018): e26440. https://doi.org/10.3897/biss.2.26440.

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During the past few years, natural disasters, political or social unrest and institutional actions have imperiled herbaria. The question has been raised multiple times whether or not the data gathered about herbaria in <i>Index Herbariorum</i> could be used to predict which herbaria are at the greatest risk. Armed with such knowledge curators and the greater collections community might be in a better position to safeguard those herbaria. To explore the feasibility of using <i>Index Herbariorum</i> data in this way, we have identified a set of specific threats and then scored herbaria according
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Dissertations / Theses on the topic "Herbarium data"

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Cowell, Carly. "Exploring the past and the present in order to predict the future: herbarium specimens, field data and extinction probability for conservation managers." Doctoral thesis, Faculty of Science, 2018. http://hdl.handle.net/11427/30182.

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Loss of biodiversity is a global conservation crisis. Environmental change is rapid and biodiversity loss is happening at rates never experienced before. Conservationists must deal with an ever growing responsibility to conserve biodiversity and in addition to this they must also meet recently recognized conservation heritage mandates. In the face of mounting environmental pressure protected areas have been identified as the primary means for saving biodiversity and heritage sites. Protected area managers are constrained by limited time to act and less available resources than in the past. Neg
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Armstrong, Zoey Nicole. "Modeling distributions of Cantharellus formosus using natural history and citizen science data." Miami University / OhioLINK, 2021. http://rave.ohiolink.edu/etdc/view?acc_num=miami1619006107999476.

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Noordhuis-Fairfax, Sarina. "Field | Guide: John Berger and the diagrammatic exploration of place." Phd thesis, Canberra, ACT : The Australian National University, 2018. http://hdl.handle.net/1885/154278.

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Positioned between writing and drawing, the diagram is proposed by John Berger as an alternative strategy for articulating encounters with landscape. A diagrammatic approach offers a schematic vocabulary that can compress time and offer a spatial reading of information. Situated within the contemporary field of direct data visualisation, my practice-led research interprets Berger’s ‘Field’ essay as a guide to producing four field | studies within a suburban park in Canberra. My seasonal investigations demonstrate how applying the conventions of the pictorial list, dot-distribution map, routing
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Cheng, Yi-Ru, and 鄭怡如. "Plant exploration in the Pacific Islands during Taihoku Imperial University period (1928-1945) based on herbarium data." Thesis, 2016. http://ndltd.ncl.edu.tw/handle/23402208759776687387.

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碩士<br>國立臺灣大學<br>生態學與演化生物學研究所<br>104<br>Survey of natural resources in the Southeast Asia and the Pacific is one of the most important missions of Japan during its colonization period since late nineteen century. Tens of thousands of specimens were collected in these regions mostly by two Japanese botanists in the early 20th century, Ryozo Kanehira and Takahide Hosokawa. They also represented the two major periods of plant surveys in Taiwan, led by the Department of Forestry of Government Research Institute and the Department of Botany of Taihoku Imperial University (TIU, now National Taiwan Un
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"Advancing Access to Biodiversity Data Using the SALIX Method and Digital Field Guides." Master's thesis, 2012. http://hdl.handle.net/2286/R.I.15136.

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abstract: The Arizona State University Herbarium began in 1896 when Professor Fredrick Irish collected the first recorded Arizona specimen for what was then called the Tempe Normal School - a Parkinsonia microphylla. Since then, the collection has grown to approximately 400,000 specimens of vascular plants and lichens. The most recent project includes the digitization - both the imaging and databasing - of approximately 55,000 vascular plant specimens from Latin America. To accomplish this efficiently, possibilities in non-traditional methods, including both new and existing technologies, were
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Meyer, Carsten. "Limitations in Global Information on Species Occurrences." Doctoral thesis, 2015. http://hdl.handle.net/11858/00-1735-0000-0028-86AF-3.

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Detaillierte Informationen über die Verbreitungsareale von Arten sind essentiell für die Beantwortung zentraler Fragen der Ökologie, Evolutionsbiologie und Biogeographie. Solche Informationen sind auch notwendig, um Naturschutzressourcen kostenwirksam zwischen verschiedenen Regionen und Maßnahmen zu verteilen. Unser Wissen über Artverbreitungen beruht vor allem auf Punktdaten, die das Vorkommen einer bestimmten Art an einem bestimmten Ort zu einem bestimmten Zeitpunkt belegen (nachstehend „Records“). Riesige Mengen solcher Records wurden über internationale Data-Sharing-Netzwerke mobilisiert,
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Books on the topic "Herbarium data"

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H, Holmgren Noel, ed. Plant specialists index: Index to specialists in the systematics of plants and fungi, based on data from Index herbariorum (herbaria), edition 8. Koeltz Scientific Books, 1992.

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MALYSHEV, L. L., та E. A. DZYUBENKO. ATLAS OF THE NATURAL DISTRIBUTION AREAS OF CROP WILD RELATIVES FROM THE POACEAE FAMILY, THE HORDEЕAE MART. TRIBE. N.I. Vavilov All-Russian Institute of Plant Genetic Resources, 2024. https://doi.org/10.30901/978-5-907145-64-1.

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The Atlas contains maps of natural distribution areas and descriptions of perennial and annual forage grass species representating the tribe Hordeeae Mart. in the territory of the former USSR. Maps of natural distribution areas and descriptions are provided for 47 species of perennial and annual forage grasses of the following genera of the tribe: Elymus L., Agropyron Gaertn., Leymus Hochst., and Psathyrostachys Nevski. The maps were constructed using the MapInfo GIS on the original topographic base prepared by the authors. For the base map, the V.V. Alekhin's vegetation map (1961) was digitiz
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Holmgren, P. K. Plant Specialists Index: Index to Specialists in the Systematics of Plants and Fungi Based on Data from Index Hervariorum (Herbaria). 8th ed. Balogh Scientific Books, 1992.

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Cunningham, GM, WE Mulham, PL Milthorpe, and JH Leigh. Plants of Western New South Wales. CSIRO Publishing, 2011. http://dx.doi.org/10.1071/9780643104273.

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Plants of Western New South Wales grew from the long experience and expertise which the authors acquired during their employment with their respective organisations in the arid and semi-arid pastoral areas of the State. Each author became aware of the need for a comprehensive record illustrating and describing the great array of plants in the area. The need was identified both for people involved in research and advisory services, and particularly for the landholders who need to manage the plants for their livelihood.&#x0D; The book is a landmark because it draws together all of the existing k
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Book chapters on the topic "Herbarium data"

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Park, Isaac W., Susan J. Mazer, and Tadeo H. Ramirez-Parada. "Herbarium Specimens as Sources of Phenological Data." In Phenology: An Integrative Environmental Science. Springer Nature Switzerland, 2024. https://doi.org/10.1007/978-3-031-75027-4_18.

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Tressou, Jessica, Thomas Haevermans, and Liliane Bel. "Predicting Plant Threat Based on Herbarium Data: Application to French Data." In Springer Proceedings in Mathematics & Statistics. Springer International Publishing, 2020. http://dx.doi.org/10.1007/978-3-030-57306-5_44.

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MacGillivray, Fran, Irene L. Hudson, and Andrew J. Lowe. "Herbarium Collections and Photographic Images: Alternative Data Sources for Phenological Research." In Phenological Research. Springer Netherlands, 2009. http://dx.doi.org/10.1007/978-90-481-3335-2_19.

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Garcia, César, Cecília Sérgio, and James R. Shevock. "The Bryophyte Flora of São Tomé and Príncipe (Gulf of Guinea): Past, Present and Future." In Biodiversity of the Gulf of Guinea Oceanic Islands. Springer International Publishing, 2022. http://dx.doi.org/10.1007/978-3-031-06153-0_9.

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AbstractThis chapter aims to present a review of the knowledge of the bryological flora for the São Tomé and Príncipe Islands (Gulf of Guinea). An updated catalogue is presented, as well as a brief overview of the first expeditions conducted by the University of Coimbra. The labels of the historical herbarium collections and correspondence were analyzed, which provides an important source of data contributing toward research in taxonomy and conservation of these oceanic islands. Since 2007, exploratory fieldwork was carried out in different habitats of this archipelago along an altitudinal gra
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Viruel, Juan, Oriane Hidalgo, Lisa Pokorny, et al. "A Bioinformatic Pipeline to Estimate Ploidy Level from Target Capture Sequence Data Obtained from Herbarium Specimens." In Methods in Molecular Biology. Springer US, 2023. http://dx.doi.org/10.1007/978-1-0716-3226-0_5.

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Rayburn, Alexandria J., and Andrea K. Thomer. "Reconstructing Provenance in Long-Lived Data Systems: The Challenge of Paradata Capture in Memory Institution Collection Databases." In Knowledge Management and Organizational Learning. Springer International Publishing, 2024. http://dx.doi.org/10.1007/978-3-031-53946-6_9.

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AbstractParadata is important for understanding the provenance of data—but capturing and using paradata is challenging because it is often not formalized or explicit. This is particularly the case for complex, long-lived digital objects, such as the databases used to manage long-lived museum collections. These databases are passed down between generations of collections managers, but the documentation explaining their structure and changes over time is often incomplete, thus posing an obstacle to the use and maintenance of the databases. Collection managers must often reverse engineer their da
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Sinkevičienė, Zofija. "Historical data on the vascular plant flora of the Šepeta mire." In Šepeta. History of the lost mire. Nature Research Centre, Lithuania, 2024. https://doi.org/10.35513/nrc.2024.2.07.

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he paper presents data on the flora of the Šepeta mire, formerly one of the largest raised bogs in Lithuania. The data on the vascular plant species analysed in this paper are taken from the most important publications of the interwar period, mainly from the vascular plant species lists presented therein (Hryniewicki 1933, Wojtusiakowa 1938, Brundza 1940). Data on the specimens of vascular plant species stored in the herbaria of Warsaw and Vilnius Universities (WA, WI), Nature Research Centre, and in that of the Institute of Botany (BILAS) are also included in the analysis. In total, the above
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Flannery, Maura C. "Online Herbaria." In In the Herbarium. Yale University Press, 2023. http://dx.doi.org/10.12987/yale/9780300247916.003.0016.

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As the importance of plant specimens to biodiversity research became more apparent, so did the need to increase their accessibility. The vast majority of specimens are held in developed nations, not where the greatest biodiversity occurs. One solution is to digitize information on specimens and image them, and make this information available online. The Global Plants website provides access to key specimens from herbaria around the world, and the Global Biodiversity Informatics Facility (GBIF) hosts billions of natural history specimens and observation records. Now the focus is on linking this
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Jukonienė, Judita. "The analysis of historical sources on the bryophytes of the Šepeta mire." In Šepeta. History of the lost mire. Nature Research Centre, Lithuania, 2024. https://doi.org/10.35513/nrc.2024.2.06.

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The present article summarizes data on the Šepeta peatland bryophyte diversity obtained from the reviewed historical sources and available bryophyte herbarium collections applying the most recent taxonomic approach. A total of 82 bryophyte species were reported in the historical records published between 1928 and 1940. Most of them were common bog species recorded during the complex survey of Šepeta mire plant communities conducted in 1940. Besides common bog moss species, rare fen and transitional mire bryophyte species such as Drepanocladus lycopodioides, Hamatocaulis vernicosus, Meesia triq
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Aguilera Mendoza, Alba Adriana, and Rocío López de Juambelz. "Sistema integral para el manejo de la información del acervo del Herbario de Plantas Ornamentales ‘Carlos Contreras Pagés’ de la Facultad de Arquitectura de la Universidad Nacional Autónoma de México." In Avances de las mujeres en las ciencias, las humanidades y todas las disciplinas. Libro científico I 2023. Universidad Autónoma Metropolitana. Unidad Azcapotzalco., 2023. http://dx.doi.org/10.24275/uama.128.10414.

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A digital information management system is carried out that allows to standardize, simplify and automate the process of capturing, storing and disposing of the information of the specimens that make up the collection of the Herbarium of Ornamental Plants ‘Carlos Contreras Pagés’ of the Faculty of Architecture (HeFA). This system includes the design, programming and automation through internal self-communication interfaces, it is composed of various elements that save the data from the first stage of work that begins with the collection, where the gathering of field information is recorded in t
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Conference papers on the topic "Herbarium data"

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Murashko, V. V., and D. A. Krivenko. "Range reconstruction of the genus Cicer L. (Leguminosae)." In Problems of studying the vegetation cover of Siberia. TSU Press, 2020. http://dx.doi.org/10.17223/978-5-94621-927-3-2020-26.

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Based on herbarium and literature data, chorological maps were produced for 47 species of the genus Cicer, this made it possible to clarify the natural boundaries of the species and genus ranges. The species richness map was produced using the method of grid mapping. It identified five geographically isolated areas of modern species diversity: North African, Anatolian-Mediterranean, East African, East of West Asian, Central Asian. Phytogeographic measures are given for each cluster, such as area occupied, total number of species and number of endemics. It was established that the hotspot of mo
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Chigodaykina, D. S., and A. S. Revushkin. "Taxonomy and geography of wormwoods (Artemisia L.) in Southern Siberia." In Problems of studying the vegetation cover of Siberia. TSU Press, 2020. http://dx.doi.org/10.17223/978-5-94621-927-3-2020-44.

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The data on the species composition and geographical distribution of species of the genus Artemisia L. in the territory of Southern Siberia are presented. During the study of the literature and critical revision of herbarium specimens on the territory of Southern Siberia, 78 species of wormwood were identified belonging to 3 subgenera (Artemisia, Dracunculus Bess., Seriphidium (Besser ex Less.) Fourr) in 7 sections and 20 subsections. A comparative analysis of the species composition of Southern Siberia, as well as the ratio of the belt-zonal and chorological structure, revealed the features o
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Sandanov, D. V. "Application of herbaria data for plant ecology, geography, and phenology." In Problems of studying the vegetation cover of Siberia. TSU Press, 2020. http://dx.doi.org/10.17223/978-5-94621-927-3-2020-35.

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Reports on the topic "Herbarium data"

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Pererva, Victoria V., Olena O. Lavrentieva, Olena I. Lakomova, Olena S. Zavalniuk, and Stanislav T. Tolmachev. The technique of the use of Virtual Learning Environment in the process of organizing the future teachers' terminological work by specialty. [б. в.], 2020. http://dx.doi.org/10.31812/123456789/3868.

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This paper studies the concept related to E-learning and the Virtual Learning Environment (VLE) and their role in organizing future teachers’ terminological work by specialty. It is shown the creation and use of the VLE is a promising approach in qualitative restructuring of future specialists’ vocation training, a suitable complement rather than a complete replacement of traditional learning. The concept of VLE has been disclosed; its structure has been presented as a set of components, such as: the Data-based component, the Communication-based, the Management-and-Guiding ones, and the virtua
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Wright, Kirsten. Collecting Plant Phenology Data In Imperiled Oregon White Oak Ecosystems: Analysis and Recommendations for Metro. Portland State University, 2020. http://dx.doi.org/10.15760/mem.64.

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Highly imperiled Oregon white oak ecosystems are a regional conservation priority of numerous organizations, including Oregon Metro, a regional government serving over one million people in the Portland area. Previously dominant systems in the Pacific Northwest, upland prairie and oak woodlands are now experiencing significant threat, with only 2% remaining in the Willamette Valley in small fragments (Hulse et al. 2002). These fragments are of high conservation value because of the rich biodiversity they support, including rare and endemic species, such as Delphinium leucophaeum (Oregon Depart
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