Relevant bibliographies by topics / Homology search

Contents

  1. Journal articles
  2. Dissertations / Theses
  3. Books
  4. Book chapters
  5. Conference papers

Academic literature on the topic 'Homology search'

Author: Grafiati
Published: 4 June 2021
Last updated: 19 February 2022

Create a spot-on reference in APA, MLA, Chicago, Harvard, and other styles

Select a source type:

Consult the lists of relevant articles, books, theses, conference reports, and other scholarly sources on the topic 'Homology search.'

Next to every source in the list of references, there is an 'Add to bibliography' button. Press on it, and we will generate automatically the bibliographic reference to the chosen work in the citation style you need: APA, MLA, Harvard, Chicago, Vancouver, etc.

You can also download the full text of the academic publication as pdf and read online its abstract whenever available in the metadata.

Journal articles on the topic "Homology search"

1

Alam, I., A. Dress, M. Rehmsmeier, and G. Fuellen. "Comparative homology agreement search: An effective combination of homology-search methods." Proceedings of the National Academy of Sciences 101, no. 38 (September 14, 2004): 13814–19. http://dx.doi.org/10.1073/pnas.0405612101.

Full text
APA, Harvard, Vancouver, ISO, and other styles
2

Cui, Xuefeng, Tomáš Vinař, Broňa Brejová, Dennis Shasha, and Ming Li. "Homology search for genes." Bioinformatics 23, no. 13 (July 1, 2007): i97—i103. http://dx.doi.org/10.1093/bioinformatics/btm225.

Full text
APA, Harvard, Vancouver, ISO, and other styles
3

Hollich, V., and E. L. L. Sonnhammer. "PfamAlyzer: domain-centric homology search." Bioinformatics 23, no. 24 (October 31, 2007): 3382–83. http://dx.doi.org/10.1093/bioinformatics/btm521.

Full text
APA, Harvard, Vancouver, ISO, and other styles
4

Mak, D., Y. Gelfand, and G. Benson. "Indel seeds for homology search." Bioinformatics 22, no. 14 (July 15, 2006): e341-e349. http://dx.doi.org/10.1093/bioinformatics/btl263.

Full text
APA, Harvard, Vancouver, ISO, and other styles
5

Hung, Jui-Hung, and Zhiping Weng. "Sequence Alignment and Homology Search." Cold Spring Harbor Protocols 2016, no. 11 (August 29, 2016): pdb.top093070. http://dx.doi.org/10.1101/pdb.top093070.

Full text
APA, Harvard, Vancouver, ISO, and other styles
6

Tong, Jing, Ruslan I. Sadreyev, Jimin Pei, Lisa N. Kinch, and Nick V. Grishin. "Using homology relations within a database markedly boosts protein sequence similarity search." Proceedings of the National Academy of Sciences 112, no. 22 (May 18, 2015): 7003–8. http://dx.doi.org/10.1073/pnas.1424324112.

Full text
Abstract:
Inference of homology from protein sequences provides an essential tool for analyzing protein structure, function, and evolution. Current sequence-based homology search methods are still unable to detect many similarities evident from protein spatial structures. In computer science a search engine can be improved by considering networks of known relationships within the search database. Here, we apply this idea to protein-sequence–based homology search and show that it dramatically enhances the search accuracy. Our new method, COMPADRE (COmparison of Multiple Protein sequence Alignments using
APA, Harvard, Vancouver, ISO, and other styles
7

Sybenga, J. "Homologous chromosome pairing in meiosis of higher eukaryotes—still an enigma?" Genome 63, no. 10 (October 2020): 469–82. http://dx.doi.org/10.1139/gen-2019-0154.

Full text
Abstract:
Meiosis is the basis of the generative reproduction of eukaryotes. The crucial first step is homologous chromosome pairing. In higher eukaryotes, micrometer-scale chromosomes, micrometer distances apart, are brought together by nanometer DNA sequences, at least a factor of 1000 size difference. Models of homology search, homologue movement, and pairing at the DNA level in higher eukaryotes are primarily based on studies with yeast where the emphasis is on the induction and repair of DNA double-strand breaks (DSB). For such a model, the very large nuclei of most plants and animals present serio
APA, Harvard, Vancouver, ISO, and other styles
8

Somervuo, Panu, and Liisa Holm. "SANSparallel: interactive homology search against Uniprot." Nucleic Acids Research 43, W1 (April 8, 2015): W24—W29. http://dx.doi.org/10.1093/nar/gkv317.

Full text
APA, Harvard, Vancouver, ISO, and other styles
9

Ilie, L., and S. Ilie. "Multiple spaced seeds for homology search." Bioinformatics 23, no. 22 (September 5, 2007): 2969–77. http://dx.doi.org/10.1093/bioinformatics/btm422.

Full text
APA, Harvard, Vancouver, ISO, and other styles
10

Mukherjee, Sujoy, Józef H. Przytycki, Marithania Silvero, Xiao Wang, and Seung Yeop Yang. "Search for Torsion in Khovanov Homology." Experimental Mathematics 27, no. 4 (May 11, 2017): 488–97. http://dx.doi.org/10.1080/10586458.2017.1320242.

Full text
APA, Harvard, Vancouver, ISO, and other styles
More sources

Dissertations / Theses on the topic "Homology search"

1

Syed, Intikhab Alam Syed Intikhab Alam Syed Intikhab Alam. "Integrative approaches to protein homology search." [S.l.] : [s.n.], 2005. http://deposit.ddb.de/cgi-bin/dokserv?idn=975814540.

Full text
APA, Harvard, Vancouver, ISO, and other styles
2

Alam, Intikhab. "Integrative approaches to protein homology search." [S.l.] : [s.n.], 2005. http://deposit.ddb.de/cgi-bin/dokserv?idn=975814540.

Full text
APA, Harvard, Vancouver, ISO, and other styles
3

Cameron, Michael, and mcam@mc-mc net. "Efficient Homology Search for Genomic Sequence Databases." RMIT University. Computer Science and Information Technology, 2006. http://adt.lib.rmit.edu.au/adt/public/adt-VIT20070509.162443.

Full text
Abstract:
Genomic search tools can provide valuable insights into the chemical structure, evolutionary origin and biochemical function of genetic material. A homology search algorithm compares a protein or nucleotide query sequence to each entry in a large sequence database and reports alignments with highly similar sequences. The exponential growth of public data banks such as GenBank has necessitated the development of fast, heuristic approaches to homology search. The versatile and popular blast algorithm, developed by researchers at the US National Center for Biotechnology Information (N
APA, Harvard, Vancouver, ISO, and other styles
4

Cooper, Gina Marie. "IMPROVING REMOTE HOMOLOGY DETECTION USING A SEQUENCE PROPERTY APPROACH." Wright State University / OhioLINK, 2009. http://rave.ohiolink.edu/etdc/view?acc_num=wright1251308636.

Full text
APA, Harvard, Vancouver, ISO, and other styles
5

Renkawitz, Jörg. "Monitoring homology search during DNA double-strand break repair in vivo." Diss., Ludwig-Maximilians-Universität München, 2013. http://nbn-resolving.de/urn:nbn:de:bvb:19-169454.

Full text
APA, Harvard, Vancouver, ISO, and other styles
6

Anstett, Benjamin [Verfasser], and Peter [Akademischer Betreuer] Becker. "Homology search guidance by the yeast recombination enhancer / Benjamin Anstett ; Betreuer: Peter Becker." München : Universitätsbibliothek der Ludwig-Maximilians-Universität, 2017. http://d-nb.info/1132995329/34.

Full text
APA, Harvard, Vancouver, ISO, and other styles
7

Lee, Tsung-Lu. "BAXQLB̲LAST an enhanced BLAST bioinformatics homology search tool with batch and structured query support /." [Gainesville, Fla.] : University of Florida, 2002. http://purl.fcla.edu/fcla/etd/UFE1001161.

Full text
APA, Harvard, Vancouver, ISO, and other styles
8

Renkawitz, Jörg [Verfasser], and Stefan [Akademischer Betreuer] Jentsch. "Monitoring homology search during DNA double-strand break repair in vivo / Jörg Renkawitz. Betreuer: Stefan Jentsch." München : Universitätsbibliothek der Ludwig-Maximilians-Universität, 2013. http://d-nb.info/1050648188/34.

Full text
APA, Harvard, Vancouver, ISO, and other styles
9

Freyhult, Eva. "A Study in RNA Bioinformatics : Identification, Prediction and Analysis." Doctoral thesis, Uppsala : Acta Universitatis Upsaliensis Acta Universitatis Upsaliensis, 2007. http://urn.kb.se/resolve?urn=urn:nbn:se:uu:diva-8305.

Full text
APA, Harvard, Vancouver, ISO, and other styles
10

Gajdoš, Pavel. "Vyhledávání homologních enzymů." Master's thesis, Vysoké učení technické v Brně. Fakulta informačních technologií, 2016. http://www.nusl.cz/ntk/nusl-255409.

Full text
Abstract:
Tato práce se zabývá vyhledáváním homologních enzymů v proteinových databázích, jejímž cílem je navrhnout nástroj poskytující takové vyhledávání. Čtenář se seznámí se základní teorií týkající se proteinů, enzymů, homologie, ale také s existujícími nástroji pro vyhledávání homologních proteinů a enzymů. Dále je popsáno ohodnocení nalezených existujících nástrojů pro vyhledávání homologních enzymů. Pro potřeby vyhodnocení byla vytvořena datová sada spolu s algoritmem pro vyhodnocení vyýsledků jednotlivých nástrojů. Další částí práce je návrh a implementace nové metody pro vyhledávání homologních
APA, Harvard, Vancouver, ISO, and other styles
More sources

Books on the topic "Homology search"

1

Hamilton, John Michael Uwe. Search for a plant homologue of the Saccharomyces cerevisiae cell cycle control gene CDC7. Manchester: University of Manchester, 1994.

Find full text
APA, Harvard, Vancouver, ISO, and other styles
2

Gribskov, Michael, and John Devereux, eds. Sequence Analysis Primer. Oxford University Press, 1995. http://dx.doi.org/10.1093/oso/9780195098747.001.0001.

Full text
Abstract:
Computerized sequence analysis is an integral part of biotechnological research, yet many biologists have received no formal training in this important technology. Sequence Analysis Primer offers the beginner the necessary background to enter this vital field and helps more seasoned researchers to fine-tune their approach. It covers basic data manipulation such as homology searches, stem-loop identification, and protein secondary structure prediction, and is compatible with most sequence analysis programs. A detailed example giving steps for characterizing a new gene sequence provides users wi
APA, Harvard, Vancouver, ISO, and other styles
3

Duncan, Nancy M. Evolutionary conservation of the Caenorhabditis elegans sex determining gene her-1: The search of a her-1 homologue in the related nematode, Caenorhabditis briggsae. 1993.

Find full text
APA, Harvard, Vancouver, ISO, and other styles

Book chapters on the topic "Homology search"

1

Stamboulian, Mouses, and Nashat Mansour. "Scatter Search for Homology Modeling." In Lecture Notes in Computer Science, 66–73. Cham: Springer International Publishing, 2016. http://dx.doi.org/10.1007/978-3-319-41000-5_7.

Full text
APA, Harvard, Vancouver, ISO, and other styles
2

Saitou, Naruya. "Homology Search and Multiple Alignment." In Introduction to Evolutionary Genomics, 325–60. Cham: Springer International Publishing, 2018. http://dx.doi.org/10.1007/978-3-319-92642-1_15.

Full text
APA, Harvard, Vancouver, ISO, and other styles
3

Stojmirović, Aleksandar, Peter Andreae, Mike Boland, Thomas William Jordan, and Vladimir G. Pestov. "PFMFind: A System for Discovery of Peptide Homology and Function." In Similarity Search and Applications, 319–24. Berlin, Heidelberg: Springer Berlin Heidelberg, 2013. http://dx.doi.org/10.1007/978-3-642-41062-8_32.

Full text
APA, Harvard, Vancouver, ISO, and other styles
4

Murata, Mitsuo. "Application of PVM to Protein Homology Search." In Recent Advances in Parallel Virtual Machine and Message Passing Interface, 410–11. Berlin, Heidelberg: Springer Berlin Heidelberg, 2006. http://dx.doi.org/10.1007/11846802_60.

Full text
APA, Harvard, Vancouver, ISO, and other styles
5

Xu, Jinbo, Daniel G. Brown, Ming Li, and Bin Ma. "Optimizing Multiple Spaced Seeds for Homology Search." In Combinatorial Pattern Matching, 47–58. Berlin, Heidelberg: Springer Berlin Heidelberg, 2004. http://dx.doi.org/10.1007/978-3-540-27801-6_4.

Full text
APA, Harvard, Vancouver, ISO, and other styles
6

Yamaguchi, Yoshiki, Tsutomu Maruyama, and Akihiko Konagaya. "Three-Dimensional Dynamic Programming for Homology Search." In Field Programmable Logic and Application, 505–15. Berlin, Heidelberg: Springer Berlin Heidelberg, 2004. http://dx.doi.org/10.1007/978-3-540-30117-2_52.

Full text
APA, Harvard, Vancouver, ISO, and other styles
7

Marz, Manja, Stefanie Wehner, and Peter F. Stadler. "Homology Search for Small Structured Non-coding RNAs." In Handbook of RNA Biochemistry, 619–32. Weinheim, Germany: Wiley-VCH Verlag GmbH & Co. KGaA, 2014. http://dx.doi.org/10.1002/9783527647064.ch29.

Full text
APA, Harvard, Vancouver, ISO, and other styles
8

Cameron, Michael, Yaniv Bernstein, and Hugh E. Williams. "Clustering Near-Identical Sequences for Fast Homology Search." In Lecture Notes in Computer Science, 175–89. Berlin, Heidelberg: Springer Berlin Heidelberg, 2006. http://dx.doi.org/10.1007/11732990_16.

Full text
APA, Harvard, Vancouver, ISO, and other styles
9

Yamaguchi, Yoshiki, Yosuke Miyajima, Tsutomu Maruyama, and Akihiko Konagaya. "High Speed Homology Search Using Run-Time Reconfiguration." In Lecture Notes in Computer Science, 281–91. Berlin, Heidelberg: Springer Berlin Heidelberg, 2002. http://dx.doi.org/10.1007/3-540-46117-5_30.

Full text
APA, Harvard, Vancouver, ISO, and other styles
10

Li, Weiming, Bin Ma, and Kaizhong Zhang. "Amino Acid Classification and Hash Seeds for Homology Search." In Bioinformatics and Computational Biology, 44–51. Berlin, Heidelberg: Springer Berlin Heidelberg, 2009. http://dx.doi.org/10.1007/978-3-642-00727-9_6.

Full text
APA, Harvard, Vancouver, ISO, and other styles

Conference papers on the topic "Homology search"

1

LI, MING. "MODERN HOMOLOGY SEARCH." In Proceedings of the 19th International Conference. IMPERIAL COLLEGE PRESS, 2008. http://dx.doi.org/10.1142/9781848163324_0020.

Full text
APA, Harvard, Vancouver, ISO, and other styles
2

McVicar, Nathaniel, Walter L. Ruzzo, and Scott Hauck. "Accelerating ncRNA homology search with FPGAs." In the ACM/SIGDA international symposium. New York, New York, USA: ACM Press, 2013. http://dx.doi.org/10.1145/2435264.2435276.

Full text
APA, Harvard, Vancouver, ISO, and other styles
3

Chang, Jeffrey T., Soumya Raychaudhuri, and Russ B. Altman. "Including Biological Literature Improves Homology Search." In Proceedings of the Pacific Symposium. WORLD SCIENTIFIC, 2000. http://dx.doi.org/10.1142/9789814447362_0037.

Full text
APA, Harvard, Vancouver, ISO, and other styles
4

YAMAGUCHI, Yoshiki, Tsutomu MARUYAMA, and Akihiko KONAGAYA. "High Speed Homology Search with FPGAs." In Proceedings of the Pacific Symposium. WORLD SCIENTIFIC, 2001. http://dx.doi.org/10.1142/9789812799623_0025.

Full text
APA, Harvard, Vancouver, ISO, and other styles
5

Aljawad, Osama, Yanni Sun, Alex Liu, and Jikai Lei. "NcRNA homology search using Hamming distance seeds." In the 2nd ACM Conference. New York, New York, USA: ACM Press, 2011. http://dx.doi.org/10.1145/2147805.2147828.

Full text
APA, Harvard, Vancouver, ISO, and other styles
6

Lee, Hsiao Ping, Yin Te Tsai, and Chuan Yi Tang. "A seriate coverage filtration approach for homology search." In the 2004 ACM symposium. New York, New York, USA: ACM Press, 2004. http://dx.doi.org/10.1145/967900.967937.

Full text
APA, Harvard, Vancouver, ISO, and other styles
7

Doong, Shing-hwang. "Protein Homology Modeling with Heuristic Search for Sequence Alignment." In Proceedings of the 40th Annual Hawaii International Conference on System Sciences. IEEE, 2007. http://dx.doi.org/10.1109/hicss.2007.453.

Full text
APA, Harvard, Vancouver, ISO, and other styles
8

Ge, Hongwei, Liang Sun, and Jinghong Yu. "Enhancing protein homology batch search algorithm with sequence compression and clustering." In 2016 IEEE International Conference on Bioinformatics and Biomedicine (BIBM). IEEE, 2016. http://dx.doi.org/10.1109/bibm.2016.7822809.

Full text
APA, Harvard, Vancouver, ISO, and other styles
9

Nishii, Takuma, Tomoyuki Hiroyasu, Masato Yoshimi, Mitsunori Miki, and Hisatake Yokouchi. "Similar subsequence retrieval from two time series data using homology search." In 2010 IEEE International Conference on Systems, Man and Cybernetics - SMC. IEEE, 2010. http://dx.doi.org/10.1109/icsmc.2010.5641809.

Full text
APA, Harvard, Vancouver, ISO, and other styles
10

Khodabakhshi, Alireza Hadj, Mehdi Mirzazadeh, and Arvind Gupta. "An efficient data structure for applying multiple seeds in homology search." In 2007 IEEE 7th International Symposium on BioInformatics and BioEngineering. IEEE, 2007. http://dx.doi.org/10.1109/bibe.2007.4375750.

Full text
APA, Harvard, Vancouver, ISO, and other styles
You might also be interested in the extended bibliographies on the topic 'Homology search' for particular source types:
Journal articles Dissertations / Theses
We offer discounts on all premium plans for authors whose works are included in thematic literature selections. Contact us to get a unique promo code!

To the bibliography