Relevant bibliographies by topics / Hybrid Peptide Design

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  1. Journal articles
  2. Dissertations / Theses
  3. Book chapters
  4. Conference papers
  5. Reports

Academic literature on the topic 'Hybrid Peptide Design'

Author: Grafiati
Published: 4 June 2021
Last updated: 6 September 2023

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Journal articles on the topic "Hybrid Peptide Design"

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Chatterjee, Sunanda, Rituparna Sinha Roy та P. Balaram. "Expanding the polypeptide backbone: hydrogen-bonded conformations in hybrid polypeptides containing the higher homologues of α-amino acids". Journal of The Royal Society Interface 4, № 15 (2007): 587–606. http://dx.doi.org/10.1098/rsif.2006.0203.

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Half a century has passed since the hydrogen-bonded secondary structures of polypeptides and proteins were first recognized. An extraordinary wealth of conformational information is now available on peptides and proteins, which are formed of α-amino acid residues. More recently, the discovery of well-folded structures in oligopeptides containing β-amino acids has focused a great deal of current interest on the conformational properties of peptides constructed from higher homologues (ω) of α-amino acids. This review examines the nature of intramolecularly hydrogen-bonded conformations of hybrid
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Karaca, Banu Taktak, James Meyer, Sarah VanOosten, Mark Richter, and Candan Tamerler. "Modular Peptide-Based Hybrid Nanoprobes for Bio-Imaging and Bio-Sensing." MRS Proceedings 1621 (2014): 155–61. http://dx.doi.org/10.1557/opl.2014.368.

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ABSTRACTThe self-organization of functional proteins directly onto solid materials is attractive to a wide range of biomaterials and systems that need to accommodate a biological recognition element. In such systems, inorganic binding peptides may be an essential component due to their high affinity and selective binding features onto different types of solid surfaces. This study demonstrates a peptide-enabled self-assembly technique for designing well-defined protein arrays over a metal surface. To illustrate this concept, we designed a fusion protein that simultaneously displays a red fluore
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Al Tall, Yara, Baker Al-Nassar, Ahmad Abualhaijaa, Salsabeel H. Sabi, and Ammar Almaaytah. "The design and functional characterization of a novel hybrid antimicrobial peptide from Esculentin-1a and melittin." Pharmacia 70, no. 1 (2023): 161–70. http://dx.doi.org/10.3897/pharmacia.70.e97116.

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Antimicrobial agents are one of the most widely used drugs in medicine. In the last fifty years, the misuse of these agents caused the emergence of resistant strains of bacteria that led to an increase in life-threatening infections. The need to develop new agents has become a priority, and antimicrobial peptides attained high consideration. The antimicrobial activities of a novel In-house designed hybrid cationic peptide (BKR1) were studied against different strains of Gram-negative bacteria. This was done using the broth dilution method as outlined by the Clinical and Laboratory Institute (C
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Maji, Deepanwita, Subir Samanta, and Vaishali M. Patil. "In Silico ADMET and Docking Studies of Thiazolidinedione-acetic-acid Hybrids as Antidiabetics with Cardioprotection." Letters in Drug Design & Discovery 17, no. 12 (2020): 1475–84. http://dx.doi.org/10.2174/1570180817999200618103328.

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Background: Type-2-diabetes mellitus is associated with many side effects affecting vital body organs, especially heart. Thiazolidinediones are potent antidiabetics. Studies have proven that amino-acids and peptides promote glucose transport, have antioxidant properties, and fewer side effects, thus we designed hybrids by combining amino-acid esters and peptide esters with 2, 4 thiazolidinedione acetic acid moiety which can act as antidiabetic agent with cardioprotection properties. Methodology: In vitro ADME, toxicity, and docking studies were performed using Qikprop3.1.OSIRIS, PROTOX (Predic
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Messina, G. M. L., M. De Zotti, R. Lettieri, et al. "Design of lipidic platforms anchored within nanometric cavities by peptide hooks." RSC Advances 6, no. 52 (2016): 46984–93. http://dx.doi.org/10.1039/c6ra06054d.

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Rosa, Elisabetta, Enrico Gallo, Teresa Sibillano, et al. "Incorporation of PEG Diacrylates (PEGDA) Generates Hybrid Fmoc-FF Hydrogel Matrices." Gels 8, no. 12 (2022): 831. http://dx.doi.org/10.3390/gels8120831.

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Generated by a hierarchical and multiscale self-assembling phenomenon, peptide-based hydrogels (HGs) are soft materials useful for a variety of applications. Short and ultra-short peptides are intriguing building blocks for hydrogel fabrication. These matrices can also be obtained by mixing low-molecular-weight peptides with other chemical entities (e.g., polymers, other peptides). The combination of two or more constituents opens the door to the development of hybrid systems with tunable mechanical properties and unexpected biofunctionalities or morphologies. For this scope, the formulation,
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Hu, Fang, C. James Chou, and Joel M. Gottesfeld. "Design and synthesis of novel hybrid benzamide–peptide histone deacetylase inhibitors." Bioorganic & Medicinal Chemistry Letters 19, no. 14 (2009): 3928–31. http://dx.doi.org/10.1016/j.bmcl.2009.03.085.

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Liu, Xiaohu, Qingwen Zhang, Wolfgang Knoll, Bo Liedberg, and Yi Wang. "Rational Design of Functional Peptide–Gold Hybrid Nanomaterials for Molecular Interactions." Advanced Materials 32, no. 37 (2020): 2000866. http://dx.doi.org/10.1002/adma.202000866.

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Tripathy, S. P., A. Kumar, V. Manivel, S. K. Panda, and K. V. Rao. "Design and synthesis of a self-assembling peptide derived from the envelope proteins of HIV type 1. An approach to heterovalent immunogens." Journal of Immunology 148, no. 12 (1992): 4012–20. http://dx.doi.org/10.4049/jimmunol.148.12.4012.

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Abstract A chimeric peptide that included sequences from gp120 and gp41 of HIV type 1 was synthesized. Cleavage from solid support yielded a composite of self-oligomerized products with molecular masses ranging from 5 to about 9 kDa. The oligomer but not its reduced, monomeric form was recognized by human anti-HIV sera and at least one of the two lysines in the sequence was involved in antibody binding. The oligomeric peptide was immunogenic, yielding a conformation-specific antibody response. Co-oligomerization of a hepatitis B surface Ag-derived peptide and the HIV type 1-derived peptide yie
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Tall, Yara Al, Baha’a Al-Rawashdeh, Ahmad Abualhaijaa, Ammar Almaaytah, Majed Masadeh, and Karem H. Alzoubi. "Functional Characterization of a Novel Hybrid Peptide with High Potency against Gram-negative Bacteria." Current Pharmaceutical Design 26, no. 3 (2020): 376–85. http://dx.doi.org/10.2174/1381612826666200128090700.

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Background: Multi-drug resistant infections are a growing worldwide health concern. There is an urgent need to produce alternative antimicrobial agents. Objective : The study aimed to design a new hybrid antimicrobial peptide, and to evaluate its antimicrobial activity alone and in combination with traditional antibiotics. Methods: Herein, we designed a novel hybrid peptide (BMR-1) using the primary sequences of the parent peptides Frog Esculentin-1a and Monkey Rhesus cathelicidin (RL-37). The positive net charge was increased, and other physicochemical parameters were optimized. The antimicro
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Dissertations / Theses on the topic "Hybrid Peptide Design"

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Martin, Julie. "Design and direct synthesis of peptide-branched polysiloxane. Towards new generation of hybrid biomaterials." Thesis, Montpellier, 2019. http://www.theses.fr/2019MONTS093.

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Les travaux de recherches de cette thèse concernent la conception et la synthèse de nouveaux matériaux hybrides basés sur un squelette polysiloxane. Pour cela, plusieurs molécules ont été silylées dans le but d’être incorporées dans une chaine de silicone multifonctionnel. En effet, au contraire des approches de post-greffages, nous avons mis au point une copolymérisation directe de ces macromonomères hybrides présentant une fonction methyldihydroxysilane avec du dichlorodimethylsilane (DCDMS). Plusieurs types de biomolécules ont été silylées : peptides, médicaments, sondes pour l’imagerie, ch
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Evans, David Andrew. "Exploitation of peptide aptamers in the design and development of electronic-bio-hybrid devices." Thesis, University of Leeds, 2009. http://ethos.bl.uk/OrderDetails.do?uin=uk.bl.ethos.507692.

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Ramirez, Rodriguez Gloria Belen <1987&gt. "Mineralization of Recombinant Collagen-Like Peptide to Design Hybrid Scaffolds for Bone Tissue Regeneration." Doctoral thesis, Alma Mater Studiorum - Università di Bologna, 2017. http://amsdottorato.unibo.it/8017/1/RamirezRodriguez_GloriaBelen_tesi.pdf.

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The present PhD Thesis is focused on the fabrication of hybrid scaffolds for bone regeneration through biomimetic mineralization of recombinant collagen peptide (RCP) in the presence of magnesium (Mg) to closely mimic ionic composition of bone apatite. RCP, produced by FUJIFILM Manufacturing Europe B.V. under tradename of CellnestTM, is based on human collagen type I and it is enriched in arginine-glycine-aspartic acid sequence (RGD), that acts as a cell binding site. Biomimetic mineralization of RCP has been adapted from the bioinspired mineralization protocol of natural collagen carried out
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Mozaffari, Saghar. "Amphiphilic Cell-Penetrating Hybrid Cyclic-Linear Peptides as a Drug Delivery System." Chapman University Digital Commons, 2019. https://digitalcommons.chapman.edu/pharmaceutical_sciences_dissertations/2.

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A number of cyclic peptides containing a positively charged ring composed of arginine residues attached to hydrophobic tail made of tryptophan residues through a lysine linker namely [R5K]W5, [R6K]W5, [R5K]W6, [R7K]W5, [R5K]W7, [R6K]W6, and [R7K]W7 were synthesized and evaluated as molecular transporters. The peptides were evaluated for their ability to deliver, fluorescence-labeled cell-impermeable negatively charged phosphopeptide (F′-GpYEEI), and fluorescent labeled anti-HIV drugs (F′-FTC and F′-d4T). The results indicated that the presence of positively charged arginine residues on the rin
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Northrup, Justin David. "The Design and Synthesis of Peptidomimetic-Hybrids: Expanding Spiroligomers, Peptoids, and Proline." Diss., Temple University Libraries, 2016. http://cdm16002.contentdm.oclc.org/cdm/ref/collection/p245801coll10/id/415884.

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Chemistry<br>Ph.D.<br>Binding to protein surfaces or shallow grooves with synthetic molecules poses a unique challenge, since this inherently requires large areas to facilitate interactions. Peptoids have been shown to interact with proteins, and combinatorial libraries of peptoids have been proven to be effective in discovering new ligands for protein binding. Unfortunately, most peptoids are flexible and lack the surface area required to compete with larger protein interactions. To combat these problems, we have created spiroligomers that have a rigid backbone, exhibit functionality comparab
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Kil, Hyun Joo. "Design & Synthesis of Peptidomimetics Adopting Secondary Structures for Inhibition of p53/MDM2 Protein-protein Interaction and Multiple Myeloma Cell Adhesion." Scholar Commons, 2014. https://scholarcommons.usf.edu/etd/5051.

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The protein-protein interactions (PPIs) occur when two or more proteins are bound together. Also, this protein-protein interactions (PPIs) cause the various biological processes in the body. Due to this reason, abilities of controlling or inhibiting PPIs can give us promising advantages like (1) better understanding of biological systems, (2) development of new diagnostic approaches for health or disease, and (3) establishment of novel molecular therapeutics. Many proteins adopt the secondary structures, where most of protein-protein interactions take place. -Helices and -sheets are the prev
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Ramesh, V. V. E. "Design, synthesis and conformational investigations of novel conformationally restricted α, β-hybrid peptides and hydroxyethylamine isosteres". Thesis(Ph.D.), CSIR-National Chemical Laboratory, Pune, 2013. http://dspace.ncl.res.in:8080/xmlui/handle/20.500.12252/2164.

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Kas, Onur Y. "Design, synthesis and characterization of bio/electroactive hybrids confining chromophores in dilute solutions using a helical peptide template /." Access to citation, abstract and download form provided by ProQuest Information and Learning Company; downloadable PDF file, 148 p, 2008. http://proquest.umi.com/pqdweb?did=1459918061&sid=4&Fmt=2&clientId=8331&RQT=309&VName=PQD.

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Rydberg, Johan. "Protein-protein interactions in model systems : design, control of catalytic activity and biosensor applications." Doctoral thesis, Linköping : Linköpings universitet, 2006. http://urn.kb.se/resolve?urn=urn:nbn:se:liu:diva-7485.

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Ferre, Malagon Rafael. "Design and synthesis of short antimicrobial peptides for plant protection. Study of their mode of action." Doctoral thesis, Universitat de Girona, 2010. http://hdl.handle.net/10803/8053.

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Aquesta tesi doctoral està basada en el desenvolupament de nous agents antimicrobians derivats del pèptid híbrid cecropina A-melitina WKLFKKILKVL-NH2 (Pep3) que siguin sostenibles i útils per al control de malalties de plantes. Es van dissenyar i sintetitzar més de 133 anàlegs de Pep3 mitjançant química combinatòria. Es van obtenir anàlegs de Pep3 amb una elevada activitat contra fitopatògens i que presentaven baixa toxicitat. Els millors anàlegs van presentar eficàcies comparables amb pesticides de referència en la prevenció d'infeccions causades per fitopatògens. Es va estudiar el mecanisme
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Book chapters on the topic "Hybrid Peptide Design"

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Atrián-Blasco, Elena, Héctor Soria-Carrera, Rafael Martín-Rapún, and Scott G. Mitchell. "Rational Design and Self-Assembly of Polyoxometalate-Peptide Hybrid Materials." In Polyoxometalates. Jenny Stanford Publishing, 2022. http://dx.doi.org/10.1201/9781003277446-3.

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Yokoyama, Kenji, Toshifumi Sakai, Hideo Ishikawa, Yasutaka Morita, and Eiichi Tamiya. "Screening and Design of Hybrid Peptide That Binds with Glucose Oxidase." In Peptides: The Wave of the Future. Springer Netherlands, 2001. http://dx.doi.org/10.1007/978-94-010-0464-0_90.

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de Haan, Ellen C., Marca H. M. Wauben, Mayken C. Grosfeld-Stulemeyer, John A. W. Kruijtzer, Rob M. J. Liskamp, and Ed E. Moret. "Peptoid-Peptide Hybrids: Design, Synthesis and MHC Binding." In Peptides: The Wave of the Future. Springer Netherlands, 2001. http://dx.doi.org/10.1007/978-94-010-0464-0_489.

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Montheil, Titouan, Cécile Echalier, Jean Martinez, Ahmad Mehdi, and Gilles Subra. "Hybrid Silylated Peptides for the Design of Bio-functionalized Materials." In Springer Protocols Handbooks. Springer US, 2020. http://dx.doi.org/10.1007/978-1-0716-0720-6_6.

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Zhao, Xiaojun, Songtao Wang, Yangrong Lu, and Jingqiu Cheng. "PEPTIDE SELF-ASSEMBLY BIOMATERIALS DESIGN AND APPLICATION." In Biologically-Responsive Hybrid Biomaterials. WORLD SCIENTIFIC, 2010. http://dx.doi.org/10.1142/9789814295680_0004.

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Conference papers on the topic "Hybrid Peptide Design"

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Hochbaum, Allon. "Bioinspired design of conductive peptide nanofibers (Conference Presentation)." In Organic and Hybrid Sensors and Bioelectronics XI, edited by Ruth Shinar, Ioannis Kymissis, Luisa Torsi, and Emil J. List-Kratochvil. SPIE, 2018. http://dx.doi.org/10.1117/12.2322688.

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Reports on the topic "Hybrid Peptide Design"

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Eyal, Yoram, and Sheila McCormick. Molecular Mechanisms of Pollen-Pistil Interactions in Interspecific Crossing Barriers in the Tomato Family. United States Department of Agriculture, 2000. http://dx.doi.org/10.32747/2000.7573076.bard.

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During the evolutionary process of speciation in plants, naturally occurring barriers to reproduction have developed that affect the transfer of genes within and between related species. These barriers can occur at several different levels beginning with pollination-barriers and ending with hybrid-breakdown. The interaction between pollen and pistils presents one of the major barriers to intra- and inter-specific crosses and is the focus of this research project. Our long-term goal in this research proposal was defined to resolve questions on recognition and communication during pollen-pistil
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Noga, Edward J., Angelo Colorni, Michael G. Levy, and Ramy Avtalion. Importance of Endobiotics in Defense against Protozoan Ectoparasites of Fish. United States Department of Agriculture, 2003. http://dx.doi.org/10.32747/2003.7586463.bard.

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Infectious disease is one of the most serious causes of economic loss in all sectors of aquaculture. There is a critical need to understand the molecular basis for protection against infectious disease so that safer, more reliable and more cost-effective strategies can be designed for their control. As part of this effort, the major goal of our BARD project was to determine the importance of endobiotics as a defense against protozoan ectoparasites in fish. Endobiotics, or antimicrobial polypeptides, are peptides and small proteins that are increasingly recognized as having a vital role in the
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