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Relevant bibliographies by topics / Hydrogen bond network

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Academic literature on the topic 'Hydrogen bond network'

Author: Grafiati

Published: 4 June 2021

Last updated: 1 February 2022

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Journal articles on the topic "Hydrogen bond network"

1

Jiang, Zhiqiang, Ya Li, Yirui Shen, et al. "Robust Hydrogel Adhesive with Dual Hydrogen Bond Networks." Molecules 26, no. 9 (2021): 2688. http://dx.doi.org/10.3390/molecules26092688.

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Hydrogel adhesives are attractive for applications in intelligent soft materials and tissue engineering, but conventional hydrogels usually have poor adhesion. In this study, we designed a strategy to synthesize a novel adhesive with a thin hydrogel adhesive layer integrated on a tough substrate hydrogel. The adhesive layer with positive charges of ammonium groups on the polymer backbones strongly bonds to a wide range of nonporous materials’ surfaces. The substrate layer with a dual hydrogen bond system consists of (i) weak hydrogen bonds between N,N-dimethyl acrylamide (DMAA) and acrylic aci

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Chase, D. B., and R. M. Ikeda. "Hydrogen bond network formation." Macromolecular Symposia 141, no. 1 (1999): 217–26. http://dx.doi.org/10.1002/masy.19991410119.

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XIONG, ZICHANG, JUN GAO, DONGJU ZHANG, and CHENGBU LIU. "HYDROGEN BOND NETWORK OF 1-ALKYL-3-METHYLIMIDAZOLIUM IONIC LIQUIDS: A NETWORK THEORY ANALYSIS." Journal of Theoretical and Computational Chemistry 11, no. 03 (2012): 587–98. http://dx.doi.org/10.1142/s0219633612500381.

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Hydrogen bond is a key factor in the determination of structures and properties of room-temperature ionic liquids. Connections of these hydrogen bonds form a network. In this work, we analyzed the hydrogen bond network of 1-alkyl-3-methylimidazolium ionic liquids using network theory. A two-dimensional view of the hydrogen bond network has been generated, the connection pattern shown that the average length of line shape connection is 2.44 to 2.77 for six 1-alkyl-3-methylimidazolium ionic liquids, and the connection patterns are different for short and long alkyl side chain length. The degree

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4

Aida, Misako, and Dai Akase. "Hydrogen-bond pattern to characterize water network." Pure and Applied Chemistry 91, no. 2 (2019): 301–16. http://dx.doi.org/10.1515/pac-2018-0721.

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Abstract Hydrogen-bond (HB) patterns correspond to topologically distinct isomers of water clusters, and can be expressed by digraphs. The HB pattern is used to divide the configuration space of water cluster at a finite temperature. The populations of the HB patterns are transformed into the relative Helmholtz energies. The method is based on the combination of molecular simulation with graph theory. At a finite temperature it can be observed that other isomers than local minimum structures on the potential energy surface are highly populated. The dipole moment of a constituent molecule in a

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Flores-Alamo, M., A. L. Maldonado-Hermenegildo, and H. Gómez-Ruiz. "The hydrogen bond in supramolecular network." Acta Crystallographica Section A Foundations of Crystallography 67, a1 (2011): C665—C666. http://dx.doi.org/10.1107/s0108767311083152.

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Sano, K., H. Murayama, and F. Yokoyama. "Lubricant bonding via hydrogen bond network." IEEE Transactions on Magnetics 30, no. 6 (1994): 4140–42. http://dx.doi.org/10.1109/20.334015.

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Bachrach, Steven M. "Extended Hydrogen Bond Network Enabled Superbases." Organic Letters 14, no. 21 (2012): 5598–601. http://dx.doi.org/10.1021/ol302722s.

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Borowiak, Teresa, Grzegorz Dutkiewicz, and Jacek Thiel. "The Hydrogen Bond Networks in Nicinquinium Salts." Zeitschrift für Naturforschung B 55, no. 11 (2000): 1020–24. http://dx.doi.org/10.1515/znb-2000-1106.

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Abstract Crystals of nicinquinium chloride and bromide incorporate water molecules due to the im balance of hydrogen bond donors and acceptors. The resulting intermolecular hydrogen bond system indicates a better proton accepting ability of chloride ions than bromide ions. The chlo ride anions accept four hydrogen bonds in an almost tetrahedral arrangement whereas only two are formed with the bromide anions. As a consequence in the crystal structure of the chloride a three dimensional network of hydrogen bonds is formed, while in that of the bromide only chains of hydrogen bonded species exi

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Fábry, Jan, Michaela Fridrichová, Michal Dušek, Karla Fejfarová, and Radmila Krupková. "Two polymorphs of bis(2-carbamoylguanidinium) fluorophosphonate dihydrate." Acta Crystallographica Section C Crystal Structure Communications 68, no. 2 (2012): o71—o75. http://dx.doi.org/10.1107/s0108270111053133.

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Two polymorphs of bis(2-carbamoylguanidinium) fluorophosphonate dihydrate, 2C2H7N4O+·FO3P2−·2H2O, are presented. Polymorph (I), crystallizing in the space groupPnma, is slightly less densely packed than polymorph (II), which crystallizes inPbca. In (I), the fluorophosphonate anion is situated on a crystallographic mirror plane and the O atom of the water molecule is disordered over two positions, in contrast with its H atoms. The hydrogen-bond patterns in both polymorphs share similar features. There are O—H...O and N—H...O hydrogen bonds in both structures. The water molecules donate their H

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Barnes, J. C., and T. J. R. Weakley. "Hydrogen Bond Network in Ethylenediammonium Bis(hydrogenmaleate)." Acta Crystallographica Section C Crystal Structure Communications 53, no. 10 (1997): IUC9700018. http://dx.doi.org/10.1107/s0108270197099381.

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Dissertations / Theses on the topic "Hydrogen bond network"

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Matsumoto, Masakazu, and Iwao Ohmine. "A new approach to the dynamics of hydrogen bond network in liquid water." American Institute of Physics, 1996. http://hdl.handle.net/2237/7055.

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Kwong, Lam Elwood. "Investigating the Role of the Proximal Cysteine Hydrogen Bonding Network and Distal Pocket in Chloroperoxidase." FIU Digital Commons, 2018. https://digitalcommons.fiu.edu/etd/3898.

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Chloroperoxidase (CPO) is one of the most versatile heme enzyme isolated from the marine fungus, Caldariomyces fumago. Functionally, CPO can catalyze four types of reactions: peroxidation (peroxidase-like), dismutation (catalase-like), halogenation (halogenase-like), and peroxygenation (P450-like). Structurally, CPO has a distal and proximal pockets that can be best described as a hybrid of classical peroxidase and P450s. As a heme-thiolate protein, CPO contains the conserved proximal Pro28-Cys29-Pro30 stretch found in other members of the family. However, the structural and functional roles o

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Shersher, Elena. "The Influence of the Proximal Thiolate Ligand and Hydrogen Bond Network of the Proximal Helix on the Structural and Biochemical Properties of Chloroperoxidase." FIU Digital Commons, 2016. http://digitalcommons.fiu.edu/etd/2483.

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Chloroperoxidase (CPO) from Caldariomyces fumago is a versatile heme enzyme with great potential for environmental and pharmaceutical applications. It catalyzes a plethora of reactions including halogenation, dismutation, epoxidation, and oxidation. The diverse catalytic capabilities of CPO have long been attributed to the protein’s distinct active site that combines structural features of peroxidases and cytochromes P450. Particularly, the role of the axial thiolate ligand in CPO catalysis has been much debated. Furthermore, no data are available on the role of hydrogen bonding between Arg 26

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Näslund, Lars-Åke. "Probing unoccupied electronic states in aqueous solutions." Doctoral thesis, Stockholm University, Department of Physics, 2004. http://urn.kb.se/resolve?urn=urn:nbn:se:su:diva-294.

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<p>Water is one of the most common compounds on earth and is essential for all biological activities. Water has, however, been a mystery for many years due to the large number of unusual chemical and physical properties, e.g. decreased volume during melting and maximum density at 4 °C. The origin of the anomalies behavior is the nature of the hydrogen bond. This thesis will presented an x-ray absorption spectroscopy (XAS) study to reveal the hydrogen bond structure in liquid water.</p><p>The x-ray absorption process is faster than a femtosecond and thereby reflects the molecular orbital struct

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Mancini, Adauto Luiz. "Um sistema híbrido inteligente para previsão de posição de átomos de hidrogênio em proteínas." Universidade de São Paulo, 2008. http://www.teses.usp.br/teses/disponiveis/55/55134/tde-03072008-084623/.

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Os métodos existentes para a previsão da posição de átomos de hidrogênio em proteínas são todos baseados na simulação computacional de modelos construídos a partir de características físicas e (ou) químicas das moléculas. A abordagem proposta neste trabalho faz uso de técnicas inteligentes para a predição da posição de átomos de hidrogênio contidos em grupos hidroxilas (OH) pertencentes à cadeias laterais dos aminoácidos serina, treonina e tirosina. Estas técnicas inteligentes são utilizadas em duas fases para a solução do problema proposto: o preprocessamento dos dados e a predição da posição

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Kirch, Alexsandro. "Modelagem e caracterização de sistemas nanofluidos através de simulações moleculares em multiescala." Universidade de São Paulo, 2018. http://www.teses.usp.br/teses/disponiveis/43/43134/tde-28092018-152059/.

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As propriedades físicas incomuns exibidas por fluidos confinados em meios porosos desempenham um papel importante em diversos processos químicos, geoquímicos e ambientais. Atualmente, muitos aspectos da estrutura e dinâmica dos fluidos espacialmente confinados ainda são pouco compreendidos. Nesse contexto, fenômenos interfaciais influenciam consideravelmente os processos que ocorrem em meios nanoporosos, podendo resultar em efeitos relevantes para o desenvolvimento dos dispositivos nanofluidicos. Esses sistemas multifásicos e com fenômenos multifísicos podem apresentar propriedades eletrônico

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Koishi, Ayumi. "Mécanismes de nucléation des carbonates." Thesis, Université Grenoble Alpes (ComUE), 2017. http://www.theses.fr/2017GREAU032/document.

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La précipitation et la dissolution du carbonate de calcium (CaCO3) sont des processus clés dans les systèmes naturels en raison de leur association intime avec le cycle du carbone terrestre. La précipitation se produit généralement sur des substrats étrangers en abaissant les barrières énergétiques qui contrôlent la nucléation. Ce processus appelé nucléation hétérogène résulte d'une interaction entre la sursaturation du fluide et les différentes énergies d’interface entre substrat-noyau-fluide. Malgré l’importance des énergies d’interface sur le devenir de la nucléation hétérogène, la littérat

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8

Herrmann, Anna [Verfasser]. "Surface-Bound Functional Hydrogel Networks / Anna Herrmann." Berlin : Freie Universität Berlin, 2020. http://d-nb.info/1219070157/34.

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Mooney, Barbara Logan. "An Integrated Graph-Theoretic Approach to Understanding Solvation Using a Novel Data Mining Tool, moleculaRnetworks." Diss., The University of Arizona, 2012. http://hdl.handle.net/10150/243096.

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An integrated graph-theoretic and geometric approach to the analysis of aqueous solvation of atomic ions is presented. This analysis makes use of a novel data-mining tool, moleculaRnetworks, to process data from molecular dynamics simulations. The workings and structure of this tool are discussed, along with the development and testing of its PageRank algorithm-based rapid solvation polyhedra classifier. The ability to classify instantaneous solvation polyhedra enables a finely detailed understanding of shell structure-behavior relationships, as water molecules simultaneously rearrange about i

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Ni, Yiping. "Polymer networks architecture using supramolecular interactions." Phd thesis, Université Jean Monnet - Saint-Etienne, 2012. http://tel.archives-ouvertes.fr/tel-00952090.

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Supramolecular polymer networks are prepared basing on two different supramolecular interactions, ionic interaction and hydrogen bonds interaction. Ionic interaction was introduced in P(BMA-co-MA) with CaCO3 as a filler. The presence of Ca2+ is confirmed with X-ray diffraction by the apperence of specific ionic peak. The hydrogen bond interaction was introduced by two approaches. One is to first prepare a supramolecular monomer bearing DA moiety then supramolecular polymer P(MAAM-co-St) and P(MAP-co-St) are prepared by polyaddition. In the other approach, the supramolecular polymer is synthesi

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Books on the topic "Hydrogen bond network"

1

Mizuse, Kenta. Spectroscopic Investigations of Hydrogen Bond Network Structures in Water Clusters. Springer Japan, 2013. http://dx.doi.org/10.1007/978-4-431-54312-1.

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Bellissent-Funel, Marie-Claire. Hydrogen Bond Networks. Springer Netherlands, 1994.

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Bellissent-Funel, Marie-Claire, and John C. Dore, eds. Hydrogen Bond Networks. Springer Netherlands, 1994. http://dx.doi.org/10.1007/978-94-015-8332-9.

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Mizuse, Kenta. Spectroscopic Investigations of Hydrogen Bond Network Structures in Water Clusters. Springer, 2013.

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Mizuse, Kenta. Spectroscopic Investigations of Hydrogen Bond Network Structures in Water Clusters. Springer, 2013.

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Mizuse, Kenta. Spectroscopic Investigations of Hydrogen Bond Network Structures in Water Clusters. Kenta Mizuse, 2015.

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7

Bruner, Barry D. Ultrafast memory loss and energy redistribution in the hydrogen bond network of liquid water. 2006.

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1943-, Bellissent-Funel M. C., Dore John C, and NATO Advanced Research Workshop on Hydrogen Bond Networks (1993 : Cargèse, France), eds. Hydrogen bond networks. Kluwer Academic Publishers, 1994.

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9

Lin, Nian, and Sebastian Stepanow. Designing low-dimensional nanostructures at surfaces by supramolecular chemistry. Edited by A. V. Narlikar and Y. Y. Fu. Oxford University Press, 2017. http://dx.doi.org/10.1093/oxfordhb/9780199533046.013.10.

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This article describes the use of supramolecular chemistry to design low-dimensional nanostructures at surfaces. In particular, it discusses the design strategies of two types of low-dimensional supramolecular nanostructures: structures stabilized by hydrogen bonds and structures stabilized by metal-ligand co-ordination interactions. After providing an overview of hydrogen-bond systems such as 0D discrete clusters, 1D chains, and 2D open networks and close-packed arrays, the article considers metal-co-ordination systems. It also presents experimental results showing that both hydrogen bonds an

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Book chapters on the topic "Hydrogen bond network"

1

Palma, M. U. "Role of the H-Bond Network of Water in Biological Structures and Systems." In Hydrogen Bond Networks. Springer Netherlands, 1994. http://dx.doi.org/10.1007/978-94-015-8332-9_53.

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Geiger, Alfons, and Peter Mausbach. "Molecular Dynamics Simulation Studies of the Hydrogen Bond Network in Water." In Hydrogen-Bonded Liquids. Springer Netherlands, 1991. http://dx.doi.org/10.1007/978-94-011-3274-9_14.

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Sciortino, Francesco. "Dynamics of the Hydrogen Bond Network in Simulated Liquid Water." In Correlations and Connectivity. Springer Netherlands, 1990. http://dx.doi.org/10.1007/978-94-009-2157-3_17.

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Nagano, Shingo, Motomasa Tanaka, Koichiro Ishimori, et al. "Catalytic Roles of the Distal Site Hydrogen Bond Network of Peroxidases." In Oxygen Homeostasis and Its Dynamics. Springer Japan, 1998. http://dx.doi.org/10.1007/978-4-431-68476-3_44.

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Angell, C. A., C. Alba-Simionesco, J. Fan, and J. L. Green. "Hydrogen Bonding and the Fragility of Supercooled Liquids and Biopolymers." In Hydrogen Bond Networks. Springer Netherlands, 1994. http://dx.doi.org/10.1007/978-94-015-8332-9_1.

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Sciortino, Francesco, and Srikanth Sastry. "Sound Propagation in Hydrogen Bonded Molecular Liquids: The Case of Liquid Water." In Hydrogen Bond Networks. Springer Netherlands, 1994. http://dx.doi.org/10.1007/978-94-015-8332-9_10.

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Soper, A. K. "Orientational Correlations in Hydrogen Bonded Networks." In Hydrogen Bond Networks. Springer Netherlands, 1994. http://dx.doi.org/10.1007/978-94-015-8332-9_11.

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Andreani, C., F. Menzinger, M. Nardone, F. P. Ricci, M. A. Ricci, and A. K. Soper. "Are Hydrogen Bonds Present in Hydrogen Halides Liquids Other Than HF?" In Hydrogen Bond Networks. Springer Netherlands, 1994. http://dx.doi.org/10.1007/978-94-015-8332-9_12.

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Bakó, I., P. Jedlovszky, G. Pálinkás, and J. C. Dore. "Investigation of the Structure of Liquid Formic Acid." In Hydrogen Bond Networks. Springer Netherlands, 1994. http://dx.doi.org/10.1007/978-94-015-8332-9_13.

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Leicknam, J.-Cl, M. Diraison, G. Tarjus, and S. Bratos. "Incoherent Inelastic Neutron Scattering from Liquid Water: A Computer Simulation Study." In Hydrogen Bond Networks. Springer Netherlands, 1994. http://dx.doi.org/10.1007/978-94-015-8332-9_14.

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Conference papers on the topic "Hydrogen bond network"

1

Sasai, Masaki. "Fluctuations of hydrogen bond network in liquid water." In Slow dynamics in condensed matter. AIP, 1992. http://dx.doi.org/10.1063/1.42425.

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Santoro, Jacopo, Anna Maria Nardiello, Lucia Sessa, and Stefano Piotto. "Analysis of the hydrogen bond network for binding sites identification." In 6th International Electronic Conference on Medicinal Chemistry. MDPI, 2020. http://dx.doi.org/10.3390/ecmc2020-07452.

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Kasaai, Mohammad R., and Masoud Farzaneh. "Evaluation of Mechanisms of Ice Adhesion on Power Network Equipment." In ASME 2004 23rd International Conference on Offshore Mechanics and Arctic Engineering. ASMEDC, 2004. http://dx.doi.org/10.1115/omae2004-51267.

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The objective of this study is to review the mechanisms of ice adhesion to cables and insulators, with a special emphasis on aluminum and ceramic materials, as these devices are made from these materials. This review shows that the physico-chemical interactions and mechanical interlock contribute to the mechanisms of ice adhesion to surfaces. The physico-chemical mechanisms of ice adhesion to surfaces are classified into three main categories: dipole-dipole or ion-dipole interactions; hydrogen bond; and van der Waals interactions. The interfacial adhesion strength of ice/metals or ice/ceramic

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Wang, Ying, and Youping Chen. "An Atomic Model of Cellulose Network in Wood Cell Wall." In ASME 2008 International Mechanical Engineering Congress and Exposition. ASMEDC, 2008. http://dx.doi.org/10.1115/imece2008-67603.

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Wood is composed of parallel columns of long hollow cells which are made up of layered composite of semi-crystalline cellulose fibrils embedded in an amorphous matrix of hemicellulose and lignin. The extraordinary mechanical performance of wood is believed to result from a molecular mechanism operated through hydrogen bond connection. However, the molecular interactions, the assembly method of cell-wall components, as well as the molecular mechanisms responsible for the deformation of wood, are not well understood yet. Progress in studying the superior mechanical properties of wood cell is sev

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Nowak, Justyna, and Józef K. Mościcki. "Role of the Substrate Surface Morphology and Physicochemical Properties for Molecular Transport in the Vicinal Water: Aspect of Continuity of Dynamic Hydrogen Bond Network." In The World Congress on Recent Advances in Nanotechnology. Avestia Publishing, 2016. http://dx.doi.org/10.11159/icnnfc16.129.

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Liao, Jung-Chi, and George Oster. "The Engines of Biomolecular Motors." In ASME 2004 3rd Integrated Nanosystems Conference. ASMEDC, 2004. http://dx.doi.org/10.1115/nano2004-46094.

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The majority of biomolecular motors are powered by nucleoside triphosphate (NTP), especially adenosine triphosphate (ATP). These motors consist of a β-sheet with highly conserved motifs and the nucleotide binding domain around it. The highly conserved protein folds are the engines of these motors, which convert the energy of NTP hydrolysis cycle to mechanical work. Although functions of molecular motors are widely diverse, (including cargo movement, DNA unwinding, protein degradation, ion pumping, etc), the nucleotide binding domains are very similar. In the binding site, NTP undergoes a hydro

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Zhu, Beibei, and Hongtao Gao. "Molecular Dynamics Simulation for the Impact of N-Decanol Surfactants on the Liquid-Vapor Interface of Lithium Bromide Aqueous Solution." In 2010 14th International Heat Transfer Conference. ASMEDC, 2010. http://dx.doi.org/10.1115/ihtc14-22746.

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In order to investigate the effect of n-decanol, a kind of alcohol surfactants, on the absorption of water vapor into lithium bromide aqueous solution, this study focused on microscopic structure of the liquid-vapor interface of the electrolyte solution, the impact of n-decanol molecules on the interfacial properties and the absorption dynamic process employing the method of molecular dynamics simulation. The liquid-vapor configuration of lithium bromide aqueous solution added with four concentration of n-decanol can be analyzed by examining the density profile, the radial distribution functio

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Wilk, R., T. Kleine-Ostmann, F. Rutz, et al. "THz Deformation Modes in Hydrogen-bond Mediated Biomolecular Networks." In >2006 Joint 31st International Conference on Infrared Millimeter Waves and 14th International Conference on Teraherz Electronics. IEEE, 2006. http://dx.doi.org/10.1109/icimw.2006.368788.

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Steber, Amanda, Melanie Schnell, and Cristobal Perez. "HYDROGEN BOND NETWORKS IN THE SOLVATION OF THE SIMPLEST SUGAR." In 74th International Symposium on Molecular Spectroscopy. University of Illinois at Urbana-Champaign, 2019. http://dx.doi.org/10.15278/isms.2019.fc01.

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Kim, Yung Sam, and Robin M. Hochstrasser. "Observation of kinetic networks of hydrogen-bond exchange using 2D IR echo spectroscopy." In International Conference on Ultrafast Phenomena. OSA, 2006. http://dx.doi.org/10.1364/up.2006.mc1.

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