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Journal articles on the topic '<i>Coprinopsis cinerea<'

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Published: 4 June 2021
Last updated: 13 February 2022

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1

Pukkila, Patricia J. "Coprinopsis cinerea." Current Biology 21, no. 16 (2011): R616—R617. http://dx.doi.org/10.1016/j.cub.2011.05.042.

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2

Hoegger, Patrik J., Monica Navarro-Gonz�lez, Sreedhar Kilaru, Matthias Hoffmann, Elisha D. Westbrook, and Ursula K�es. "The laccase gene family in Coprinopsis cinerea ( Coprinus cinereus )." Current Genetics 45, no. 1 (2004): 9–18. http://dx.doi.org/10.1007/s00294-003-0452-x.

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3

Schulze, M., and M. Rühl. "Rekombinante Enzymproduktion im Basidiomycet Coprinopsis cinerea." Chemie Ingenieur Technik 90, no. 9 (2018): 1262. http://dx.doi.org/10.1002/cite.201855286.

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4

Masuya, Takahiro, Yuta Tsunematsu, Yuichiro Hirayama, et al. "Biosynthesis of lagopodins in mushroom involves a complex network of oxidation reactions." Organic & Biomolecular Chemistry 17, no. 2 (2019): 234–39. http://dx.doi.org/10.1039/c8ob02814a.

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Targeted gene knockout in Coprinopsis cinerea, yeast in vivo bioconversion and in vitro assays elucidated the lagopodin biosynthetic pathway, including a complexity-generating network of oxidation steps.
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5

Walser, Piers J., Ursula Kües, Markus Aebi, and Markus Künzler. "Ligand interactions of the Coprinopsis cinerea galectins." Fungal Genetics and Biology 42, no. 4 (2005): 293–305. http://dx.doi.org/10.1016/j.fgb.2004.12.004.

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6

Robles, Carolina A., Silvia E. Lopez, and Cecilia C. Carmarán. "Basidiomicetes endofíticos de madera en Platanus acerifolia (Platanaceae) de Argentina: notas y estudios de cultivo." Boletín de la Sociedad Argentina de Botánica 50, no. 4 (2015): 437–45. http://dx.doi.org/10.31055/1851.2372.v50.n4.12907.

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Conocer las características de cepas fúngicas locales aumenta nuestra capacidad de poder hacer uso de sus propiedades e implementar, en consecuencia, nuevas y mejores formas de aprovechamiento de los recursos biológicos nativos. Con el fin de contribuir al conocimiento de estos organismos, en este trabajo se presentan descripciones detalladas y estudios de cultivo de 5 especies previamente reportadas como basidiomicetes endofíticos: Coprinopsis cinerea, Granulobasidium vellereum, Inonotus rickii, Phanerochaete chrysosporium y Trichosporon sporotrichoides, aisladas como endofitos de madera de plátanos de sombra (Platanus acerifolia) en la Ciudad de Buenos Aires, Argentina. Coprinopsis cinerea es descripta por primera vez en cultivo y se señalan las diferencias que presentan los cultivos de G. vellereum e I. rickii con reportes previos. Los caracteres de cultivo de P. chrysosporium y T. sporotrichoides no presentaron diferencias apreciables con descripciones previas
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7

Kontkanen, Hanna, Ann Westerholm-Parvinen, Markku Saloheimo, et al. "Novel Coprinopsis cinerea Polyesterase That Hydrolyzes Cutin and Suberin." Applied and Environmental Microbiology 75, no. 7 (2009): 2148–57. http://dx.doi.org/10.1128/aem.02103-08.

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ABSTRACT Three cutinase gene-like genes from the basidiomycete Coprinopsis cinerea (Coprinus cinereus) found with a similarity search were cloned and expressed in Trichoderma reesei under the control of an inducible cbh1 promoter. The selected transformants of all three polyesterase constructs showed activity with p-nitrophenylbutyrate, used as a model substrate. The most promising transformant of the cutinase CC1G_09668.1 gene construct was cultivated in a laboratory fermentor, with a production yield of 1.4 g liter−l purified protein. The expressed cutinase (CcCUT1) was purified to homogeneity by immobilized metal affinity chromatography exploiting a C-terminal His tag. The N terminus of the enzyme was found to be blocked. The molecular mass of the purified enzyme was determined to be around 18.8 kDa by mass spectrometry. CcCUT1 had higher activity on shorter (C2 to C10) fatty acid esters of p-nitrophenol than on longer ones, and it also exhibited lipase activity. CcCUT1 had optimal activity between pH 7 and 8 but retained activity over a wide pH range. The enzyme retained 80% of its activity after 20 h of incubation at 50°C, but residual activity decreased sharply at 60°C. Microscopic analyses and determination of released hydrolysis products showed that the enzyme was able to depolymerize apple cutin and birch outer bark suberin.
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8

Kamada, Takashi, Hiroaki Sano, Takehito Nakazawa, and Kiyoshi Nakahori. "Regulation of fruiting body photomorphogenesis in Coprinopsis cinerea." Fungal Genetics and Biology 47, no. 11 (2010): 917–21. http://dx.doi.org/10.1016/j.fgb.2010.05.003.

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9

Money, Nicholas P., and J. P. Ravishankar. "Biomechanics of stipe elongation in the basidiomycete Coprinopsis cinerea." Mycological Research 109, no. 5 (2005): 627–34. http://dx.doi.org/10.1017/s0953756205002509.

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10

Zhang, Wenming, Xiuxiu Wu, Yajun Zhou, et al. "Characterization of stipe elongation of the mushroom Coprinopsis cinerea." Microbiology 160, no. 9 (2014): 1893–902. http://dx.doi.org/10.1099/mic.0.079418-0.

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Previously, we observed an acid-induced short-term wall extension in Flammulina velutipes apical stipes during a 15 min period after a change from a neutral to an acidic pH. This acid-induced stipe wall extension was eliminated by heating and reconstituted by a snail expansin-like protein, although we failed to isolate any endogenous expansin-like protein from F. velutipes because of its limited 1 mm fast elongation region. In this study, we report that Coprinopsis cinerea stipes possess a 9 mm fast elongation apical region, which is suitable as a model material for wall extension studies. The elongating apical stipe showed two phases of acid-induced wall extension, an initial quick short-term wall extension during the first 15 min and a slower, gradually decaying long-term wall extension over the subsequent 2 h. After heating or protein inactivation pretreatment, apical stipes lost the long-term wall extension, retaining a slower short-term wall extension, which was reconstituted by an expansin-like snail protein. In contrast, the non-elongating basal stipes showed only a weaker short-term wall extension. We propose that the long-term wall extension is a protein-mediated process involved in stipe elongation, whereas the short-term wall extension is a non-protein mediated process not involved in stipe elongation.
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11

Syamsia, Syamsia, Abubakar Idhan, Amanda Patappari, Noerfitryani Noerfitryani, Rahmi Rahmi, and Iradhatullah Rahim. "Molecular Identification of Endophytic Fungi from Local Rice and Growth Test on Several Types of Culture Media." International Journal of Agriculture System 7, no. 2 (2019): 89. http://dx.doi.org/10.20956/ijas.v7i2.2031.

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Local rice is rice that has been cultivated for generations by the community and commonly cultivated without using chemical inputs. Endophytic fungi are fungi that live in the plant tissue and does not cause disease symptoms in the host plants. This study aimed to molecular identifying isolates of MDTA and MDTB endophytic fungi which have been isolated from the local Pulu Mandoti rice plant tissue and growth test on the four types of culture media those were synthetic PDA, natural PDA, MPA, and MEA. The fungi DNA isolation using DNesay Kit. DNA sequencing analysis using the mega BLAST program showed that the MDTB fungus has similarities to Podoscypha bolleana strain 32034 no accession JQ675334 and Podoscypha bolleana strain 32032 no accession JQ675332, whereas the MDTA fungus has similarities to Coprinopsis cinerea A2S3-5 isolate and Coprinopsis cinerea strain CNRMA / F 07-32. The best culture media and sporulation of endophytic fungi is MPA media. This research is the first study to molecular identifying with endophytic fungi from local rice and viability test on the four types of culture media. The results of this study contribute to the diversity of local rice endophytic fungi in Sulawesi.
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12

Lilly, Walt W., Jason E. Stajich, Patricia J. Pukkila, Sarah K. Wilke, Noriko Inoguchi, and Allen C. Gathman. "An expanded family of fungalysin extracellular metallopeptidases of Coprinopsis cinerea." Mycological Research 112, no. 3 (2008): 389–98. http://dx.doi.org/10.1016/j.mycres.2007.11.013.

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13

Watanabe, Tsuneo, Masahiro Tagawa, Hideyuki Tamaki, and Satoshi Hanada. "Coprinopsis cinerea from rice husks forming sclerotia in agar culture." Mycoscience 52, no. 2 (2011): 152–56. http://dx.doi.org/10.1007/s10267-010-0075-2.

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14

Zhang, Wenming, Sihua Wu, Liyin Cai, et al. "Improved Treatment and Utilization of Rice Straw by Coprinopsis cinerea." Applied Biochemistry and Biotechnology 184, no. 2 (2017): 616–29. http://dx.doi.org/10.1007/s12010-017-2579-0.

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15

Muraguchi, Hajime. "Identification of a substrate of the methyltransferase Ich1 involved in cap differentiation in Coprinopsis cinerea." Impact 2020, no. 3 (2020): 9–11. http://dx.doi.org/10.21820/23987073.2020.3.9.

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The ichijiku1 (ich1) gene is an essential controller of the formation of the 'cap', or pileus in the fruiting of Coprinopsis cinerea, an edible mushroom more commonly known as grey shag. The ich1 gene encodes for the Ich1 protein, a methyltransferase enzyme with a winged helix-like DNA-binding domain as well as an o-methyltransferase domain. These structural features contribute towards its rather unique molecular mechanisms. Formation of the pileus represents a crucial part of the reproductive process of C. cinerea. Thus, mutations or environmental conditions that affect pileus formation are likely to have a dramatic impact on the survival of such strains of the fungus. Dr Hajime Muraguchi, from Akita Prefectural University is leading a team that is seeking to elucidate the molecular mechanisms of the ich1 gene.
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16

Otaka, Junnosuke, Daisuke Hashizume, Yui Masumoto, et al. "Hitoyol A and B, Two Norsesquiterpenoids from the Basidiomycete Coprinopsis cinerea." Organic Letters 19, no. 15 (2017): 4030–33. http://dx.doi.org/10.1021/acs.orglett.7b01784.

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17

Shioya, Tatsuhiro, Hiroe Nakamura, Noriyoshi Ishii, et al. "The Coprinopsis cinerea septin Cc.Cdc3 is involved in stipe cell elongation." Fungal Genetics and Biology 58-59 (September 2013): 80–90. http://dx.doi.org/10.1016/j.fgb.2013.08.007.

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18

Babot, Esteban D., José C. del Río, Lisbeth Kalum, Angel T. Martínez, and Ana Gutiérrez. "Oxyfunctionalization of aliphatic compounds by a recombinant peroxygenase from Coprinopsis cinerea." Biotechnology and Bioengineering 110, no. 9 (2013): 2323–32. http://dx.doi.org/10.1002/bit.24904.

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19

Wälti, Martin A., Cristina Villalba, Reto M. Buser, Anke Grünler, Markus Aebi, and Markus Künzler. "Targeted Gene Silencing in the Model Mushroom Coprinopsis cinerea (Coprinus cinereus) by Expression of Homologous Hairpin RNAs." Eukaryotic Cell 5, no. 4 (2006): 732–44. http://dx.doi.org/10.1128/ec.5.4.732-744.2006.

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ABSTRACT The ink cap Coprinopsis cinerea is a model organism for studying fruiting body (mushroom) formation in homobasidiomycetes. Mutant screens and expression studies have implicated a number of genes in this developmental process. Functional analysis of these genes, however, is hampered by the lack of reliable reverse genetics tools for C. cinerea. Here, we report the applicability of gene targeting by RNA silencing for this organism. Efficient silencing of both an introduced GFP expression cassette and the endogenous cgl1 and cgl2 isogenes was achieved by expression of homologous hairpin RNAs. In latter case, silencing was the result of a hairpin construct containing solely cgl2 sequences, demonstrating the possibility of simultaneous silencing of whole gene families by a single construct. Expression of the hairpin RNAs reduced the mRNA levels of the target genes by at least 90%, as determined by quantitative real-time PCR. The reduced mRNA levels were accompanied by cytosine methylation of transcribed and nontranscribed DNA at both silencing and target loci in the case of constitutive high-level expression of the hairpin RNA but not in the case of transient expression. These results suggest the presence of both posttranscriptional and transcriptional gene silencing mechanisms in C. cinerea and demonstrate the applicability of targeted gene silencing as a powerful reverse genetics approach in this organism.
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20

Kim, Ji-Su, Young-Sang Kwon, Dong-Won Bae, Youn-Sig Kwak, and Yong-Bum Kwack. "Proteomic Analysis of Coprinopsis cinerea under Conditions of Horizontal and Perpendicular Gravity." Mycobiology 45, no. 3 (2017): 226–31. http://dx.doi.org/10.5941/myco.2017.45.3.226.

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21

Murata, Yukio, and Takashi Kamada. "Identification of new mutant alleles of pcc1 in the homobasidiomycete Coprinopsis cinerea." Mycoscience 50, no. 2 (2009): 137–39. http://dx.doi.org/10.1007/s10267-008-0454-0.

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22

Stöckli, Martina, Chia-wei Lin, Ramon Sieber, David F. Plaza, Robin A. Ohm, and Markus Künzler. "Coprinopsis cinerea intracellular lactonases hydrolyze quorum sensing molecules of Gram-negative bacteria." Fungal Genetics and Biology 102 (May 2017): 49–62. http://dx.doi.org/10.1016/j.fgb.2016.07.009.

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23

Correa-Martinez, C., A. Brentrup, K. Hess, K. Becker, A. H. Groll, and F. Schaumburg. "First description of a local Coprinopsis cinerea skin and soft tissue infection." New Microbes and New Infections 21 (January 2018): 102–4. http://dx.doi.org/10.1016/j.nmni.2017.11.008.

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24

Stöckli, Martina, Brandon I. Morinaka, Gerald Lackner, et al. "Bacteria‐induced production of the antibacterial sesquiterpene lagopodin B in Coprinopsis cinerea." Molecular Microbiology 112, no. 2 (2019): 605–19. http://dx.doi.org/10.1111/mmi.14277.

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25

Juturu, Veeresh, Christina Aust, and Jin Chuan Wu. "Heterologous expression and biochemical characterization of acetyl xylan esterase from Coprinopsis cinerea." World Journal of Microbiology and Biotechnology 29, no. 4 (2012): 597–605. http://dx.doi.org/10.1007/s11274-012-1215-y.

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26

Wang, Bo, Lijuan Wang, Yaqiu Lin, et al. "Purification and characterization of a laccase from Coprinopsis cinerea in Pichia pastoris." World Journal of Microbiology and Biotechnology 30, no. 4 (2013): 1199–206. http://dx.doi.org/10.1007/s11274-013-1540-9.

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27

Muraguchi, Hajime, Kiwamu Umezawa, Mai Niikura, et al. "Strand-Specific RNA-Seq Analyses of Fruiting Body Development in Coprinopsis cinerea." PLOS ONE 10, no. 10 (2015): e0141586. http://dx.doi.org/10.1371/journal.pone.0141586.

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28

Heneghan, Mary N., Claudine Porta, Cunjin Zhang, et al. "Characterization of Serine Proteinase Expression in Agaricus bisporus and Coprinopsis cinerea by Using Green Fluorescent Protein and the A. bisporus SPR1 Promoter." Applied and Environmental Microbiology 75, no. 3 (2008): 792–801. http://dx.doi.org/10.1128/aem.01897-08.

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ABSTRACT The Agaricus bisporus serine proteinase 1 (SPR1) appears to be significant in both mycelial nutrition and senescence of the fruiting body. We report on the construction of an SPR promoter::green fluorescent protein (GFP) fusion cassette, pGreen_hph1_SPR_GFP, for the investigation of temporal and developmental expression of SPR1 in homobasidiomycetes and to determine how expression is linked to physiological and environmental stimuli. Monitoring of A. bisporus pGreen_hph1_SPR_GFP transformants on media rich in ammonia or containing different nitrogen sources demonstrated that SPR1 is produced in response to available nitrogen. In A. bisporus fruiting bodies, GFP activity was localized to the stipe of postharvest senescing sporophores. pGreen_hph1_SPR_GFP was also transformed into the model basidiomycete Coprinopsis cinerea. Endogenous C. cinerea proteinase activity was profiled during liquid culture and fruiting body development. Maximum activity was observed in the mature cap, while activity dropped during autolysis. Analysis of the C. cinerea genome revealed seven genes showing significant homology to the A. bisporus SPR1 and SPR2 genes. These genes contain the aspartic acid, histidine, and serine residues common to serine proteinases. Analysis of the promoter regions revealed at least one CreA and several AreA regulatory motifs in all sequences. Fruiting was induced in C. cinerea dikaryons, and fluorescence was determined in different developmental stages. GFP expression was observed throughout the life cycle, demonstrating that serine proteinase can be active in all stages of C. cinerea fruiting body development. Serine proteinase expression (GFP fluorescence) was most concentrated during development of young tissue, which may be indicative of high protein turnover during cell differentiation.
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29

Stajich, J. E., S. K. Wilke, D. Ahren, et al. "Insights into evolution of multicellular fungi from the assembled chromosomes of the mushroom Coprinopsis cinerea (Coprinus cinereus)." Proceedings of the National Academy of Sciences 107, no. 26 (2010): 11889–94. http://dx.doi.org/10.1073/pnas.1003391107.

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30

Nakazawa, Takehito, Yuki Ando, Kohei Kitaaki, Kiyoshi Nakahori та Takashi Kamada. "Efficient gene targeting in ΔCc.ku70 or ΔCc.lig4 mutants of the agaricomycete Coprinopsis cinerea". Fungal Genetics and Biology 48, № 10 (2011): 939–46. http://dx.doi.org/10.1016/j.fgb.2011.06.003.

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31

Yamashita, Masashi, Noriyuki Sueyoshi, Hiroki Yamada, et al. "Characterization of CoPK02, a Ca2+/calmodulin-dependent protein kinase in mushroom Coprinopsis cinerea." Bioscience, Biotechnology, and Biochemistry 82, no. 8 (2018): 1335–43. http://dx.doi.org/10.1080/09168451.2018.1462692.

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32

Eshima, Yasunari, Yujiro Higuchi, Takashi Kinoshita, Shin-ichi Nakakita та Kaoru Takegawa. "Transglycosylation Activity of Glycosynthase Mutants of Endo-β-N-Acetylglucosaminidase from Coprinopsis cinerea". PLOS ONE 10, № 7 (2015): e0132859. http://dx.doi.org/10.1371/journal.pone.0132859.

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33

Kaneko, Keisuke, Yasunori Sugiyama, Yusuke Yamada, et al. "CoPK32 is a novel stress-responsive protein kinase in the mushroom Coprinopsis cinerea." Biochimica et Biophysica Acta (BBA) - General Subjects 1810, no. 6 (2011): 620–29. http://dx.doi.org/10.1016/j.bbagen.2011.03.018.

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34

Bertossa, Rinaldo C., Ursula Kües, Markus Aebi, and Markus Künzler. "Promoter analysis of cgl2, a galectin encoding gene transcribed during fruiting body formation in Coprinopsis cinerea (Coprinus cinereus)." Fungal Genetics and Biology 41, no. 12 (2004): 1120–31. http://dx.doi.org/10.1016/j.fgb.2004.09.001.

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35

Srivilai, P., and P. Loutchanwo. "Coprinopsis cinerea as a Model Fungus to Evaluate Genes Underlying Sexual Development in Basidiomycetes." Pakistan Journal of Biological Sciences 12, no. 11 (2009): 821–35. http://dx.doi.org/10.3923/pjbs.2009.821.835.

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36

Mohankumar, S. "Wheat flour, an inexpensive medium for in vitro cultivation of coprophilous fungus Coprinopsis cinerea." Current Research in Environmental & Applied Mycology 7, no. 3 (2017): 144–54. http://dx.doi.org/10.5943/cream/7/3/1.

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37

Merz, J., G. Schembecker, Stephanie Riemer, M. Nimtz, and H. Zorn. "Purification and identification of a novel cutinase from Coprinopsis cinerea by adsorptive bubble separation." Separation and Purification Technology 69, no. 1 (2009): 57–62. http://dx.doi.org/10.1016/j.seppur.2009.06.021.

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38

Dornte, Bastian, and Ursula Kues. "Split trp1+ Gene Markers for Selection in Sequential Transformations of the Agaricomycete Coprinopsis cinerea." Current Biotechnology 6, no. 2 (2017): 139–48. http://dx.doi.org/10.2174/2211550105666160517142815.

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39

Xie, Yichun, Jinhui Chang, and Hoi Shan Kwan. "Carbon metabolism and transcriptome in developmental paths differentiation of a homokaryotic Coprinopsis cinerea strain." Fungal Genetics and Biology 143 (October 2020): 103432. http://dx.doi.org/10.1016/j.fgb.2020.103432.

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40

Nakagawa, Yuko, Sayaka Kikuchi, Yuichi Sakamoto, and Akira Yano. "Identification and characterization of CcCTR1, a copper uptake transporter-like gene, in Coprinopsis cinerea." Microbiological Research 165, no. 4 (2010): 276–87. http://dx.doi.org/10.1016/j.micres.2009.05.004.

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41

Otaka, Junnosuke, Takeshi Shimizu, Yushi Futamura, Daisuke Hashizume, and Hiroyuki Osada. "Structures and Synthesis of Hitoyopodins: Bioactive Aromatic Sesquiterpenoids Produced by the Mushroom Coprinopsis cinerea." Organic Letters 20, no. 19 (2018): 6294–97. http://dx.doi.org/10.1021/acs.orglett.8b02788.

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42

Nguyen, Dong Xuan, Takehito Nakazawa, Genki Myo, et al. "A promoter assay system using gene targeting in agaricomycetes Pleurotus ostreatus and Coprinopsis cinerea." Journal of Microbiological Methods 179 (December 2020): 106053. http://dx.doi.org/10.1016/j.mimet.2020.106053.

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43

Niu, Xin, Zhonghua Liu, Yajun Zhou, Jun Wang, Wenming Zhang, and Sheng Yuan. "Stipe cell wall architecture varies with the stipe elongation of the mushroom Coprinopsis cinerea." Fungal Biology 119, no. 10 (2015): 946–56. http://dx.doi.org/10.1016/j.funbio.2015.07.008.

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44

Kilaru, Sreedhar, Patrik J. Hoegger, Andrzej Majcherczyk, et al. "Expression of laccase gene lcc1 in Coprinopsis cinerea under control of various basidiomycetous promoters." Applied Microbiology and Biotechnology 71, no. 2 (2006): 200–210. http://dx.doi.org/10.1007/s00253-005-0128-1.

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45

Dörnte, Bastian, and Ursula Kües. "Paradoxical performance of tryptophan synthase gene trp1 + in transformations of the basidiomycete Coprinopsis cinerea." Applied Microbiology and Biotechnology 100, no. 20 (2016): 8789–807. http://dx.doi.org/10.1007/s00253-016-7693-3.

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46

Rühl, Martin, Karin Lange, and Ursula Kües. "Laccase production and pellet morphology of Coprinopsis cinerea transformants in liquid shake flask cultures." Applied Microbiology and Biotechnology 102, no. 18 (2018): 7849–63. http://dx.doi.org/10.1007/s00253-018-9227-7.

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47

Collins, Catherine M., Mary N. Heneghan, Sreedhar Kilaru, Andy M. Bailey, and Gary D. Foster. "Improvement of the Coprinopsis cinerea molecular toolkit using new construct design and additional marker genes." Journal of Microbiological Methods 82, no. 2 (2010): 156–62. http://dx.doi.org/10.1016/j.mimet.2010.05.007.

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48

Wang, Jun, Liqin Kang, Zhonghua Liu та Sheng Yuan. "Gene cloning, heterologous expression and characterization of a Coprinopsis cinerea endo-β-1,3(4)-glucanase". Fungal Biology 121, № 1 (2017): 61–68. http://dx.doi.org/10.1016/j.funbio.2016.09.003.

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49

Bai, Yang, Yanxin Wang, Xiao Liu, et al. "Heterologous expression and characterization of a novel chitin deacetylase, CDA3, from the mushroom Coprinopsis cinerea." International Journal of Biological Macromolecules 150 (May 2020): 536–45. http://dx.doi.org/10.1016/j.ijbiomac.2020.02.083.

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50

Wälti, Martin Andreas, Piers Jamie Walser, Stéphane Thore, et al. "Structural Basis for Chitotetraose Coordination by CGL3, a Novel Galectin-Related Protein from Coprinopsis cinerea." Journal of Molecular Biology 379, no. 1 (2008): 146–59. http://dx.doi.org/10.1016/j.jmb.2008.03.062.

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