Relevant bibliographies by topics / Illumina array

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  1. Journal articles
  2. Dissertations / Theses
  3. Books
  4. Book chapters
  5. Conference papers

Academic literature on the topic 'Illumina array'

Author: Grafiati
Published: 4 June 2021
Last updated: 7 February 2022

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Journal articles on the topic "Illumina array"

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Smith, Mike L., Keith A. Baggerly, Henrik Bengtsson, Matthew E. Ritchie, and Kasper D. Hansen. "illuminaio: An open source IDAT parsing tool for Illumina microarrays." F1000Research 2 (December 4, 2013): 264. http://dx.doi.org/10.12688/f1000research.2-264.v1.

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The IDAT file format is used to store BeadArray data from the myriad of genomewide profiling platforms on offer from Illumina Inc. This proprietary format is output directly from the scanner and stores summary intensities for each probe-type on an array in a compact manner. A lack of open source tools to process IDAT files has hampered their uptake by the research community beyond the standard step of using the vendor’s software to extract the data they contain in a human readable text format. To fill this void, we have developed the illuminaio package that parses IDAT files from any BeadArray
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Noble, Alexandra J., John F. Pearson, Joseph M. Boden, et al. "A validation of Illumina EPIC array system with bisulfite-based amplicon sequencing." PeerJ 9 (February 10, 2021): e10762. http://dx.doi.org/10.7717/peerj.10762.

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The Illumina Infinium® MethylationEPIC BeadChip system (hereafter EPIC array) is considered to be the current gold standard detection method for assessing DNA methylation at the genome-wide level. EPIC arrays are often used for hypothesis generation or pilot studies, the natural conclusion to which is to validate methylation candidates and expand these in a larger cohort, in a targeted manner. As such, an accurate smaller-scale, targeted technique, that generates data at the individual CpG level that is equivalent to the EPIC array, is needed. Here, we tested an alternative DNA methylation det
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Tait, Rich, Ryan Ferretti, Barry Simpson, et al. "34 Present and future of genomic test reporting in the cattle industry." Journal of Animal Science 97, Supplement_2 (2019): 19–20. http://dx.doi.org/10.1093/jas/skz122.036.

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Abstract A series of custom low density (LD) SNP genotyping platforms have been created over the years. Recognized by the GeneSeek Genomic Profiler (GGP) nomenclature, these SNP arrays have increased in size as new versions were created, such as: GGP-LD-v1 (n = 8,762), GGP-LD-v2 (n = 20,057), GGP-LD-v3 (n = 26,151), GGP-LD-v4 (n = 30,108), and GGP Bovine 50K (n = 47,843), all of which contained a base of the Illumina Bovine LD array (n = 7,931) and then added SNPs to provide maximum information content (Shannon Entropy) and optimal genomic coverage into target populations without specific rest
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Mah, Clarence K., Jill P. Mesirov, and Lukas Chavez. "An accessible GenePattern notebook for the copy number variation analysis of Illumina Infinium DNA methylation arrays." F1000Research 7 (December 5, 2018): 1897. http://dx.doi.org/10.12688/f1000research.16338.1.

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Illumina Infinium DNA methylation arrays are a cost-effective technology to measure DNA methylation at CpG sites genome-wide and across cohorts of normal and cancer samples. While copy number alterations are commonly inferred from array-CGH, SNP arrays, or whole-genome DNA sequencing, Illumina Infinium DNA methylation arrays have been shown to detect copy number alterations at comparable sensitivity. Here we present an accessible, interactive GenePattern notebook for the analysis of copy number variation using Illumina Infinium DNA methylation arrays. The notebook provides a graphical user int
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Guo, Yan, Jing He, Shilin Zhao, et al. "Illumina human exome genotyping array clustering and quality control." Nature Protocols 9, no. 11 (2014): 2643–62. http://dx.doi.org/10.1038/nprot.2014.174.

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Zhang, Pan, David C. Samuels, Shilin Zhao, Jing Wang, Yu Shyr, and Yan Guo. "Practicability of mitochondrial heteroplasmy detection through an Illumina genotyping array." Mitochondrion 31 (November 2016): 75–78. http://dx.doi.org/10.1016/j.mito.2016.08.018.

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Wang, Jing, David C. Samuels, Yu Shyr, and Yan Guo. "StrandScript: evaluation of Illumina genotyping array design and strand correction." Bioinformatics 33, no. 15 (2017): 2399–401. http://dx.doi.org/10.1093/bioinformatics/btx186.

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Pidsley, Ruth, Chloe C. Y Wong, Manuela Volta, Katie Lunnon, Jonathan Mill, and Leonard C. Schalkwyk. "A data-driven approach to preprocessing Illumina 450K methylation array data." BMC Genomics 14, no. 1 (2013): 293. http://dx.doi.org/10.1186/1471-2164-14-293.

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Maksimovic, Jovana, Lavinia Gordon, and Alicia Oshlack. "SWAN: Subset-quantile Within Array Normalization for Illumina Infinium HumanMethylation450 BeadChips." Genome Biology 13, no. 6 (2012): R44. http://dx.doi.org/10.1186/gb-2012-13-6-r44.

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Maksimovic, Jovana, Belinda Phipson, and Alicia Oshlack. "A cross-package Bioconductor workflow for analysing methylation array data." F1000Research 5 (June 8, 2016): 1281. http://dx.doi.org/10.12688/f1000research.8839.1.

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Methylation in the human genome is known to be associated with development and disease. The Illumina Infinium methylation arrays are by far the most common way to interrogate methylation across the human genome. This paper provides a Bioconductor workflow using multiple packages for the analysis of methylation array data. Specifically, we demonstrate the steps involved in a typical differential methylation analysis pipeline including: quality control, filtering, normalization, data exploration and statistical testing for probe-wise differential methylation. We further outline other analyses su
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Dissertations / Theses on the topic "Illumina array"

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Naiel, Abdulbasit. "Study of acute myeloid leukaemia with known chromosomal translocations." Thesis, Brunel University, 2014. http://bura.brunel.ac.uk/handle/2438/9303.

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Acute myeloid leukaemia (“AML”) is a clonal disease characterised by increased, uncontrolled abnormal white blood cells and the accumulation of leukaemia immature cells in the bone marrow and bloodstream. Chromosomal rearrangements have been detected in almost half of AML cases. It has been proven that the chromosomal rearrangements constitute a marker for the diagnosis and prognosis of AML and have therapeutic consequences. The discovery of these rearrangements has led to a new World Health Organization (“WHO”) classification system. However, small regions of cryptic chromosomal rearrangement
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Oussalah, Abderrahim. "Déterminants génétiques du métabolisme des monocarbones : approche gène candidat dans deux populations ambulatoires et étude d'association avec la maladie de Crohn." Thesis, Nancy 1, 2011. http://www.theses.fr/2011NAN10088/document.

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Des études d'associations pangénomiques ont démontré une relation entre le taux plasmatique de la vitamine B12 et le polymorphisme du gène FUT2 (fucosyltransferase 2). Dans des modèles expérimentaux, le statut sécréteur pour FUT2 a été impliqué dans la susceptibilité à l'infection par Helicobacter pylori (H. pylori). Nous avons évalué l'influence du polymorphisme FUT2 461 G>A sur les marqueurs du métabolisme des monocarbones dans deux populations ambulatoires en Europe et en Afrique de l'Ouest ainsi que la possible association entre l'infection par H. pylori et le polymorphisme de FUT2. Nou
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Books on the topic "Illumina array"

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Youngner, Stuart J. The Smell of Chlorine. Edited by Stuart J. Youngner and Robert M. Arnold. Oxford University Press, 2016. http://dx.doi.org/10.1093/oxfordhb/9780199974412.013.29.

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After trying to come to terms with death in the late 1960s and early 1970s, American medicine and the society it served largely abandoned the effort. Instead, both became preoccupied with a less existentially threatening task—controlling the timing of death by using or not using an array of high-tech interventions. The author shares some of his personal biography and the cultural context of his own professional development to illuminate some of the difficulties inherent in the efforts of health professionals to help dying patients and their families. He suggests that our society, with its emph
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Weissmark, Mona Sue. The Science of Diversity. Oxford University Press, 2020. http://dx.doi.org/10.1093/oso/9780190686345.001.0001.

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Using a multidisciplinary approach, The Science of Diversity reveals the theories, principles, and paradigms that illuminate people’s understanding of the issues surrounding human diversity, social equality, and justice. Noted psychologist and educator Dr. Mona Weissmark assembles a rich array of research from anthropology, biology, religious studies, and the social sciences to write a scholarly diorama of diversity. This book contextualizes diversity historically, tracing the evolution of ideas about “the other” and about “we” and “them” to various forms of social organization—from the “hunte
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Allen, Danielle, Paul Christesen, and Paul Millett, eds. How to Do Things with History. Oxford University Press, 2018. http://dx.doi.org/10.1093/oso/9780190649890.001.0001.

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How to Do Things with History is a collection of essays that explores current and future approaches to the study of ancient Greek cultural history. Rather than focus directly on methodology, the essays in this volume demonstrate how some of the most productive and significant methodologies for studying ancient Greece can be employed to illuminate a range of different kinds of subject matter. These essays, which bring together the work of some of the most talented scholars in the field, are based upon papers delivered at a conference held at Cambridge University in September 2014 in honor of Pa
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Colás, Alejandro. The International Political Sociology of Empire. Oxford University Press, 2018. http://dx.doi.org/10.1093/acrefore/9780190846626.013.335.

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There are two primary reasons why empires are central to our understanding of International Relations (IR). First, the empire has been replaced by juridically equal sovereign territorial states over the past century. Formal empires no longer exist, and only one head of state retains the title of Emperor—Akihito of Japan. The second reason why the study of empire matters to IR is that much of the conventional distinction between hierarchy and anarchy has been subject to various criticisms from a wide array of methodological and political perspectives. In particular, International Political Soci
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Roelofs, Luke. Combining Minds. Oxford University Press, 2019. http://dx.doi.org/10.1093/oso/9780190859053.001.0001.

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This book explores a neglected philosophical question: How do groups of interacting minds relate to singular minds? Could several of us, by organizing ourselves the right way, constitute a single conscious mind that contains our minds as parts? And could each of us have been, all along, a group of mental parts in close cooperation? Scientific progress seems to be slowly revealing that all the different physical objects around us are, at root, just a matter of the right parts put together in the right ways: How far could the same be true of minds? This book argues that we are too used to seeing
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Wingfield, Nancy M. The World of Prostitution in Late Imperial Austria. Oxford University Press, 2017. http://dx.doi.org/10.1093/oso/9780198801658.001.0001.

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This book encompasses the world of prostitution in late imperial Austria. It addresses female agency and experience, contemporary fears about sexual coercion and the forced movement of girls and women, and police surveillance. Prostitution is analyzed at three different, but interlinked levels: subjectivity, society, and state. Rather than treating prostitutes solely as victims or problems to be solved, in contrast to much of the historical literature, it seeks to find the historical subjects behind fin-de-siècle constructions of prostitutes, to restore agency to the women who participated in
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Deaville, James, Siu-Lan Tan, and Ron Rodman, eds. The Oxford Handbook of Music and Advertising. Oxford University Press, 2021. http://dx.doi.org/10.1093/oxfordhb/9780190691240.001.0001.

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The Oxford Handbook of Music and Advertising assembles an array of forty-two pathbreaking chapters on the production, texts, and reception of advertising through music. Uniquely interdisciplinary, the collection’s tripartite structure leads the reader through these stages in the communication of the advertising message as presented by Chris Wharton (2015). The chapters on production study the factors, activities, and people behind the music for the marketing pitch, both past and present. Prominent throughlines in the section include factors influencing the selection of music (and musicians) fo
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Rios, Fernando. Panpipes & Ponchos. Oxford University Press, 2020. http://dx.doi.org/10.1093/oso/9780190692278.001.0001.

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Melodious panpipes and kena flutes. The shimmering strums of a charango. Poncho-clad musicians playing “El Cóndor Pasa” at subway stops or street corners while selling their recordings. These sounds and images no doubt come to mind for many “world music” fans when they recall their early encounters with Andean music groups. Termed “Andean conjuntos” in this book and “pan-Andean bands” in other scholarship, four-to-six member ensembles of this type have long formed part of the “world music” circuit of the Global North, and also been present in the music scenes of Latin America’s major cities. I
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Book chapters on the topic "Illumina array"

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Tiedemann, Rochelle L., Hope E. Eden, Zhijun Huang, Keith D. Robertson, and Scott B. Rothbart. "Distinguishing Active Versus Passive Using Illumina MethylationEPIC BeadChip Microarrays." In Methods in Molecular Biology. Springer US, 2021. http://dx.doi.org/10.1007/978-1-0716-1294-1_7.

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AbstractThe 5-carbon positions on cytosine nucleotides preceding guanines in genomic DNA (CpG) are common targets for DNA methylation (5mC). DNA methylation removal can occur through both active and passive mechanisms. Ten-eleven translocation enzymes (TETs) oxidize 5mC in a stepwise manner to 5-hydroxymethylcytosine (5hmC), 5-formylcytosine (5fC), and 5-carboxylcytosine (5caC). 5mC can also be removed passively through sequential cell divisions in the absence of DNA methylation maintenance. In this chapter, we describe approaches that couple TET-assisted bisulfite (TAB) and oxidative bisulfite (OxBS) conversion to the Illumina MethylationEPIC BeadChIP (EPIC array) and show how these technologies can be used to distinguish active versus passive DNA demethylation. We also describe integrative bioinformatics pipelines to facilitate this analysis.
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Winchester, Laura, and Jiannis Ragoussis. "Algorithm Implementation for CNV Discovery Using Affymetrix and Illumina SNP Array Data." In Methods in Molecular Biology. Springer New York, 2011. http://dx.doi.org/10.1007/978-1-61779-507-7_14.

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Fan, Jian‐Bing, Kevin L. Gunderson, Marina Bibikova, et al. "[3] Illumina Universal Bead Arrays." In Methods in Enzymology. Elsevier, 2006. http://dx.doi.org/10.1016/s0076-6879(06)10003-8.

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Gilpin, Dawn R. "NRA Media and Second Amendment Identity Politics." In News on the Right. Oxford University Press, 2019. http://dx.doi.org/10.1093/oso/9780190913540.003.0005.

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This chapter considers the National Rifle Association (NRA) as not merely a lobbying outfit, trade association, or hobbyist group, but as a full-fledged mediasphere. Since the early 2000s, the NRA has aggressively expanded its footprint within the broader right-wing media environment—it publishes four print magazines and a highly integrated array of micro-targeted online print and video content, social media platforms, and original online television programming. Via a content analysis of NRA.org, a site that aggregates and prioritizes content from across the group’s multimedia platforms, this chapter employs critical discourse analysis to illuminate the site’s populist themes and rhetorical styles. It finds that the NRA combines the trappings of news genres and right-wing discourses with populist modes of expression to amplify and reinforce the deep affective ties between gun ownership and conservative political identity.
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Povitz, Lana Dee. "Introduction." In Stirrings. University of North Carolina Press, 2019. http://dx.doi.org/10.5149/northcarolina/9781469653013.003.0001.

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Using the conceptual lens of terroir, this chapter provides an overview of hunger and poverty in the United States, starting with the urban liberalism of the 1960s and tracing the onset of austerity politics from mid-1970s through the early 2000s. It shows how New York City food activism was connected to an array of apparently unrelated social movements, including American Communism, community control, the countercultural New Left, feminism, Black Power, and AIDS activism. As governments reduced spending on social programs, leaders from these movements formed nonprofit organizations geared toward providing services, such as emergency meals and low-cost groceries. This chapter offers an overview of why and how service provision came to absorb the attention of late-twentieth century activists and shows how nonprofit kitchens and offices became sites of mentorship. As charismatic, overwhelmingly female leaders passed on values and strategies forged in earlier eras, they enacted activist genealogies that helped sustain political involvement over decades. Powerful interpersonal bonds and people’s own sense of being transformed by their activism illuminate the underappreciated role of emotion in the history of left-progressive movements.
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Leong, Daphne. "Script versus Structure." In Performing Knowledge. Oxford University Press, 2020. http://dx.doi.org/10.1093/oso/9780190653545.003.0009.

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This chapter contextualizes the authors’ Music Theory Online essay (2005), which examined Babbitt’s None but the Lonely Flute from the points of view of flutist and theorist. That essay investigated the significant technical and interpretational challenges facing performers of Lonely Flute, their interface with listener experience, and their intertwining with structure and surface. It analyzed the compositional dexterity found in the work’s array structure, in its modes of projection in both pitch and time domains, and in its composing out to produce a rich variety of cross-references. In short, it demonstrated specific examples of interwoven performative and compositional virtuosity in Lonely Flute, explored how such virtuosity is concealed or displayed, and traced its role in defining the work’s narrative. The authors had learned the piece simultaneously: McNutt by playing it and Leong by analyzing it. In her “Postscript on Process,” McNutt described the tensions inherent in the two authors’ different ways of getting to know the piece. This contextualization explores those tensions to illuminate how performers’ and analysts’ ways of knowing might not intersect—and might even clash. McNutt’s complete performance of Lonely Flute on video closes the chapter.
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Hammerson, Geoffrey A., and Larry E. Morse. "State of the States: Geographic Patterns of Diversity, Rarity, and Endemism." In Precious Heritage. Oxford University Press, 2000. http://dx.doi.org/10.1093/oso/9780195125191.003.0011.

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The natural geography of the 50 states varies tremendously, supporting an equally varied suite of wild species—from flocks of tropical birds in southern Florida to caribou migrations across the Alaskan tundra. The geography of risk, too, varies across the nation, reflecting the interaction between natural and human history. Similarly, present-day land and water uses will largely determine the future diversity and condition of the flora and fauna. We can learn much, though, from looking at the current condition of a state’s biota, since this both reflects the past and helps illuminate the future. A state’s ecological complexion and the evolutionary history of its biota are the primary determinants of its biological diversity. These environmental factors have encouraged spectacular diversification in many regions: for instance, the freshwater fish fauna in the Southeast, the magnificent conifers along the Pacific cordillera, and the small mammal assemblages of the arid Southwest. Conversely, geological events such as the expansion and contraction of the ice sheets have left other areas of the country with a more modest array of species. States, however, are artificial constructs laid out on the landscape’s natural ecological patterns. While some state lines follow natural boundaries, such as shorelines or major rivers, most cut across the land with no sensitivity to natural features or topography. Nonetheless, urban and rural dwellers alike identify with the major ecological regions within which they live, and this is often the source of considerable pride. Montana is “big sky country,” referring to the vast open plains that sweep up against the eastern phalanx of the Rocky Mountains. California’s moniker “the golden state” now refers more to its tawny hills of summer—unfortunately at present composed mostly of alien species—than to the nuggets first found at Sutter’s Creek. Maryland, home of the Chesapeake Bay, offers the tasty blue crab (Callinectes sapidus) as its unofficial invertebrate mascot. The list could go on, evidenced by the growing number of states that offer vanity license plates celebrating their natural environment. Natural features have always played a dominant role in determining patterns of settlement and land use.
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Garb, Howard N. "Clinical Judgment and the Influence of Screening on Decision Making." In Screening for Depression in Clinical Practice. Oxford University Press, 2009. http://dx.doi.org/10.1093/oso/9780195380194.003.0009.

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How do clinicians arrive at diagnostic decisions? In most cases the decision is not made following formal criteria, but by intuition. In addition, routine interviews are often narrow and the feedback gleaned from patients is inadequate. Yet it is not clear if screening helps or hinders clinical judgment. It might be that only clinicians who have low confidence and interviewing and diagnostic skills are open to the use of and actually helped by diagnostic tools. To provide a theoretical framework for understanding why it is difficult for physicians to detect depression in primary care settings, a broad array of research in the mental health fields can be described. For example, more than 1,000 studies have been conducted on clinical judgment in the area of mental health practice, and the results from these studies can be used to illuminate the challenges physicians face in judging whether a patient is clinically depressed and can benefit from treatment. In this chapter, results on clinical judgment will be described. A second topic will also be briefly discussed. Results from research on clinical judgment would seem to indicate that screening should be of value. Yet, as noted in Chapter 7, stand-alone screening programs have added little or nothing to outcomes. Reasons for this unexpected result will be explored. Three topics will be discussed: (1) narrowness of interviews, (2) nature of patient feedback, and (3) the cognitive processes of clinicians. Depression goes undetected because in many cases physicians do not ask patients if they have symptoms of a depressive mood disorder.3 To place this in context, it can be noted that mental health professionals also often do not ask patients about important symptoms and behaviors. Failure to inquire about depression in primary care settings can be viewed in the broader context of failure to inquire about important symptoms and events in mental health settings. Research on clinical judgment has demonstrated that lack of comprehensiveness is often a problem for interviews made in clinical practice. For example, in one study,4 mental health professionals saw patients in routine clinical practice, and afterwards research investigators conducted semi-structured interviews with the patients. Remarkably, the mental health professionals had evaluated only about 50% of the symptoms that were recorded using the semi-structured interviews.
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Conference papers on the topic "Illumina array"

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Feng, Bing, David C. Samuels, William Hoskins, et al. "Down syndrome prediction/screening model based on deep learning and illumina genotyping array." In 2017 IEEE International Conference on Bioinformatics and Biomedicine (BIBM). IEEE, 2017. http://dx.doi.org/10.1109/bibm.2017.8217674.

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Kwabi-Addo, Bernard, Songping Wang, Norman H. Lee, Michael Ittmann, Funda Suer, and Joseph Devaney. "Abstract 4999: Genome-wide methylation array of human prostate tissues using illumina infunium 450K bead chip reveals distinct DNA methylation signatures with potential as clinical predictors." In Proceedings: AACR 103rd Annual Meeting 2012‐‐ Mar 31‐Apr 4, 2012; Chicago, IL. American Association for Cancer Research, 2012. http://dx.doi.org/10.1158/1538-7445.am2012-4999.

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Kaur, Simarpreet, and Vijay Kumar Banga. "Enriched image demosaicing using illuminate normalization and content based color filter array." In 2016 International Conference on Information Communication and Embedded Systems (ICICES). IEEE, 2016. http://dx.doi.org/10.1109/icices.2016.7518861.

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Carneal, Jason B., Paisan Atsavapranee, Carl W. Baumann, John H. Hamilton, and Jerry Shan. "A Global Laser Rangefinder Profilometry System for the Measurement of Three Dimensional Wave Surfaces." In ASME 2005 Fluids Engineering Division Summer Meeting. ASMEDC, 2005. http://dx.doi.org/10.1115/fedsm2005-77254.

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A Global Laser Range Profilometry (GLRP) System has been developed at the Naval Surface Warfare Center, Carderock Division (NSWCCD) for the measurement of three dimensional wave surfaces. A laser diode array consisting of 100 diodes operating at 650nm with an energy output of 3.5 mW was used to illuminate the wave surface seeded with fluorescent dye at various points in the Miniature Water Basin (MWB) facility at NSWCCD. A CCD camera located above the water surface recorded successive images of the laser array at 30 frames per second. Image processing techniques were used to locate the centroi
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Holmes, C., and C. Yau. "Bayesian hidden Markov models for detecting regions of deletion and duplication in the human genome using Illumina BeadChip arrays." In IET Seminar on Signal Processing for Genomics. IEE, 2006. http://dx.doi.org/10.1049/ic:20060374.

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Backlund, Peter B., and John P. Eddy. "Autonomous Microgrid Design Using Classifier-Guided Sampling." In ASME 2015 International Design Engineering Technical Conferences and Computers and Information in Engineering Conference. American Society of Mechanical Engineers, 2015. http://dx.doi.org/10.1115/detc2015-46107.

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Identifying high-performance, system-level microgrid designs is a significant challenge due to the overwhelming array of possible configurations. Uncertainty relating to loads, utility outages, renewable generation, and fossil generator reliability further complicates this design problem. In this paper, the performance of a candidate microgrid design is assessed by running a discrete event simulation that includes extended, unplanned utility outages during which microgrid performance statistics are computed. Uncertainty is addressed by simulating long operating times and computing average perf
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Sen, Mehmet, Gregory Kowalski, Jason Fiering, and Dale Larson. "Effects of the Light Source on the Signal Quality for Photonic and Microfluidic Nanohole Sensor Calorimeter." In ASME 2012 International Mechanical Engineering Congress and Exposition. American Society of Mechanical Engineers, 2012. http://dx.doi.org/10.1115/imece2012-88300.

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Our research focuses on the development of a calorimeter device utilizing a photonic temperature sensor based on the extraordinary optical tranmission (EOT) signals through nanohole array (NHA) sensors on metallic films in combination with a continuous coflow reactor clamped to the sensor chip. The fluid was in direct contact with the gold. The incident light traversed the layers of the flowcell assembly to illuminate the sensors, and was measured using a CCD camera. Here, the effect of the light source and the flowcell material and design on the signal quality is reported. Using an incoherent
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Yan, Yan, Zachary Carey, Mohammad Mehrmohammadi, and Wuming Jing. "Non-Invasive Tracking of Micro-Scale Microrobot Using Photoacoustic Imaging." In ASME 2019 International Mechanical Engineering Congress and Exposition. American Society of Mechanical Engineers, 2019. http://dx.doi.org/10.1115/imece2019-10629.

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Abstract This paper presents the innovative integration of both frontier submillimeter magnetic microrobot and integrated ultrasound and photoacoustic (USPA) imaging. The integrative technique will allow for potential real non-invasive microrobot operation in deep biological tissue for biomedical applications. In this study, the magnetic microrobot prototypes are fabricated in series of different sizes through patterning SU-8 photoresist mixed with nickel particles. In order for proof-of-concept, the magnetic microrobot is actuated by a static magnetic field, which is produced by a multiple ma
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Ohkubo, Toshifumi, Nobuyuki Terada, and Yoshikazu Yoshida. "Illumination and Scattered Light Detection of a Minute Particle Using a Light Source Consisting of Sub-Micrometer Defect Arrays Formed on an Extremely Flat Light Waveguide Core." In ASME 2013 Conference on Information Storage and Processing Systems. American Society of Mechanical Engineers, 2013. http://dx.doi.org/10.1115/isps2013-2846.

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A minute optical sensor combined total analysis system (TAS) is thought to be one of the most powerful functional elements needed to realize a “ubiquitous human healthcare” system. In accordance with this concept, we have proposed a fundamental structure of detecting forward and side scattered light from a small cell or particle illuminating laser power through light waveguide formed in a thin resin layer. Based on this concept, we have demonstrated its effectiveness by using a trial-manufactured optical TAS chip, supplying and detecting visible laser power by using multiple optical fibers. Ac
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