Relevant bibliographies by topics / ITS2 sequence

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  1. Journal articles
  2. Dissertations / Theses
  3. Books
  4. Book chapters
  5. Conference papers
  6. Reports

Academic literature on the topic 'ITS2 sequence'

Author: Grafiati
Published: 5 June 2025
Last updated: 2 August 2025

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Journal articles on the topic "ITS2 sequence"

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Hsueh, John Y. C., Rudolf P. Bohm, Peter J. Didier, et al. "Internal Transcribed Spacer Regions of rRNA Genes of Pneumocystis carinii from Monkeys." Clinical Diagnostic Laboratory Immunology 8, no. 3 (2001): 503–8. http://dx.doi.org/10.1128/cdli.8.3.503-508.2001.

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ABSTRACT Analysis of sequence variations among isolates ofPneumocystis carinii f. sp. macacae from 14 Indian rhesus monkeys (Macaca mulatta) at the internal transcribed spacer (ITS) regions of the nuclear rRNA gene was undertaken. Like those from P. carinii f. sp.hominis, the ITS sequences from various P. carinii f. sp. macacae isolates were not identical. Two major types of sequences were found. One type of sequence was shared by 13 isolates. These 13 sequences were homologous but not identical. Variations were found at 13 of the 180 positions in the ITS1 region and 28 of the 221 positions in
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Gong, Li, Wei Shi, Min Yang, and Xiaoyu Kong. "Marked intra-genomic variation and pseudogenes in the ITS1-5.8S-ITS2 rDNA of Symphurus plagiusa (Pleuronectiformes: Cynoglossidae)." Animal Biology 68, no. 4 (2018): 353–65. http://dx.doi.org/10.1163/15707563-17000134.

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Abstract The eukaryotic ribosomal DNA (rDNA) cluster consists of multiple copies of three genes (18S, 5.8S, and 28S rDNA) and two internal transcribed spacers (ITS1 and ITS2). In recent years, an increasing number of rDNA sequence polymorphisms have been identified in numerous species. In the present study, we provide 33 complete ITS (ITS1-5.8S-ITS2) sequences from two Symphurus plagiusa individuals. To the best of our knowledge, these sequences are the first detailed information on ITS sequences in Pleuronectiformes. Here, two divergent types (Type A and B) of the ITS1-5.8S-ITS2 rDNA sequence
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Qiu, J. H., Y. Lou, Y. Zhang, et al. "Sequence variability in internal transcribed spacers of nuclear ribosomal DNA among isolates of the oxyurid nematodes Syphacia obvelata and Aspiculuris tetraptera from mice reared in laboratories in China." Journal of Helminthology 90, no. 1 (2015): 81–85. http://dx.doi.org/10.1017/s0022149x1400087x.

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AbstractThis study examined sequence variability in internal transcribed spacers (ITS) of nuclear ribosomal DNA among Syphacia obvelata and Aspiculuris tetraptera isolates from laboratory mice from different geographical locations in China. ITS1, 5.8S and ITS2 rDNA were amplified separately from adult S. obvelata and A. tetraptera individuals by polymerase chain reaction (PCR), and the amplicons were subjected to sequencing from both directions. The lengths of the sequences of ITS1, 5.8S and ITS2 rDNA from both nematodes were 314 bp and 456 bp, 157 bp, and 273 bp and 419 bp, respectively. The
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Lee, Taebum, Hee Young Na, Sun-ju Byeon, et al. "Mycobiome analysis in fungal infected formalin-fixed and paraffin-embedded tissues for identification of pathogenic fungi: a pilot study." F1000Research 9 (July 22, 2020): 758. http://dx.doi.org/10.12688/f1000research.25126.1.

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Background: Fungal organisms are frequently observed in surgical pathological diagnosis. In order to more accurately identify fungi in formalin-fixed and paraffin-embedded (FFPE) tissues, it is necessary to use genomic information. The purpose of our pilot study is to identify the factors to be considered for the identification of pathogenic fungi using mycobiome analysis in FFPE tissues. Methods: We selected 49 cases in five hospitals. In each case, FFPE tissue was cut into 50 µm and DNA was extracted. Multiplex PCR with four primers (ITS1, ITS2, ITS3 and ITS4) was performed. Multiplex sequen
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Fenille, Roseli C., Maísa B. Ciampi, Eiko E. Kuramae, and Nilton L. Souza. "Identification of Rhizoctonia solani associated with soybean in Brazil by rDNA-ITS sequences." Fitopatologia Brasileira 28, no. 4 (2003): 413–19. http://dx.doi.org/10.1590/s0100-41582003000400011.

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The aim of this study was to identify isolates of Rhizoctonia solani causing hypocotyl rot and foliar blight in soybean (Glycine max) in Brazil by the nucleotide sequences of ITS-5.8S regions of rDNA. The 5.8S rDNA gene sequence (155 bp) was highly conserved among all isolates but differences in length and nucleotide sequence of the ITS1 and ITS2 regions were observed between soybean isolates and AG testers. The similarity of the nucleotide sequence among AG-1 IA isolates, causing foliar blight, was 95.1-100% and 98.5-100% in the ITS1 and ITS2 regions, respectively. The nucleotide sequence sim
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Nazlić, Marija, Dario Kremer, Željana Fredotović, Željka Trumbić, Valerija Dunkić, and Jasna Puizina. "Free Volatile Compounds as Chemophenetic Markers—Comparison with ITS2 and ITS1-5.8S-ITS2 Sequence Data for 18 Species of the Genus Veronica." Horticulturae 9, no. 5 (2023): 524. http://dx.doi.org/10.3390/horticulturae9050524.

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(1) Background: The purpose of this study was to compare the free volatile compounds of 18 Veronica species (Plantaginaceae), as previously analyzed by gas chromatography coupled with mass spectrometry, with their DNA sequences for internal transcribed spacers ITS2 and ITS1-5.8S-ITS2 of the nuclear ribosomal DNA. (2) Methods: Two sets of DNA sequence data were generated and used for phylogenetic analysis: ITS2 sequences (~360 bp) obtained by next-generation sequencing and ITS1-5.8S-ITS2 sequences (~580 bp) sequenced by the Sanger sequencing method. Clustering from previously analyzed free vola
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Insua, Ana, María J. López-Piñón, Ruth Freire, and Josefina Méndez. "Sequence analysis of the ribosomal DNA internal transcribed spacer region in some scallop species (Mollusca: Bivalvia: Pectinidae)." Genome 46, no. 4 (2003): 595–604. http://dx.doi.org/10.1139/g03-045.

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The internal transcribed spacer (ITS) region of the ribosomal DNA from the European scallops Aequipecten opercularis, Mimachlamys varia, Hinnites distortus, and Pecten maximus was PCR amplified and sequenced. For each species, three or five clones were examined. The size ranged between 636 and 713 bp (ITS1, 209–276 bp; 5.8S rRNA gene, 157 bp; ITS2, 270–294 bp) and GC content ranged between 47 and 50% (ITS1, 43–49%; 5.8S rRNA gene, 56–57%; ITS2, 44–49%). Variation within repeats was minimal; only clones from M. varia and P. maximus displayed a few variable sites in ITS2. Among scallops, includi
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Lee, Chao-Hung, Jannik Helweg-Larsen, Xing Tang, et al. "Update on Pneumocystis carinii f. sp.hominis Typing Based on Nucleotide Sequence Variations in Internal Transcribed Spacer Regions of rRNA Genes." Journal of Clinical Microbiology 36, no. 3 (1998): 734–41. http://dx.doi.org/10.1128/jcm.36.3.734-741.1998.

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Pneumocystis carinii f. sp. hominisisolates from 207 clinical specimens from nine countries were typed based on nucleotide sequence variations in the internal transcribed spacer regions I and II (ITS1 and ITS2, respectively) of rRNA genes. The number of ITS1 nucleotides has been revised from the previously reported 157 bp to 161 bp. Likewise, the number of ITS2 nucleotides has been changed from 177 to 192 bp. The number of ITS1 sequence types has increased from 2 to 15, and that of ITS2 has increased from 3 to 14. The 15 ITS1 sequence types are designated types A through O, and the 14 ITS2 typ
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Bhinder, Preety, Asha Chaudhry, and Aditi Soni. "Nimbecidine induced gene mutations in internal transcribed spacers 1 and 2 of Anopheles stephensi." Journal of Applied and Natural Science 4, no. 1 (2012): 23–29. http://dx.doi.org/10.31018/jans.v4i1.216.

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The genotoxic effects of nimbecidine, a commercial botanical pesticide derived from the neem tree were assessed by PCR assay on a mosquito Anopheles stephensi taken as an experimental model. After treatment with LC20 of the nimbecidine, the sequence variations in the internal transcribed spacers 1 and 2 (ITS1 and ITS2) of control and treated individuals were studied from their sequence alignment data and the mutations in the form of insertions, deletions, and substitutions were analyzed. Nimbecidine treatment induced 16 deletions, 13 insertions, 93 transitions and 140 transversions in the ITS1
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Al-Hemaid, Fahad M. A., M. Ajmal Ali, Joongku Lee, Gábor Gyulai, and Arun K. Pandey. "Application of internal transcribed spacer of nuclear ribosomal DNA for identification of Echinops mandavillei Kit Tan." Bangladesh Journal of Plant Taxonomy 21, no. 1 (2014): 33–42. http://dx.doi.org/10.3329/bjpt.v21i1.19256.

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The present study explored the use of internal transcribed spacers (ITS) sequences (ITS1-5.8S-ITS2) of nuclear ribosomal DNA (nrDNA) for identification of Echinops mandavillei Kit Tan, an endemic species to Saudi Arabia. The sequence similarity search using Basic Local Alignment Search Tool (BLAST) and phylogenetic analyses of the ITS sequence of E. mandavillei Kit Tan showed high level of sequence similarity (98%) with E. glaberrimus DC. (section Ritropsis). The novel primary sequence and the secondary structure of ITS2 of E. mandavillei could have a potential use for molecular genotyping.DOI
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Dissertations / Theses on the topic "ITS2 sequence"

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Koetschan, Christian [Verfasser], and Jörg [Akademischer Betreuer] Schultz. "The Eukaryotic ITS2 Database - A workbench for modelling RNA sequence-structure evolution / Christian Koetschan. Betreuer: Jörg Schultz." Würzburg : Universitätsbibliothek der Universität Würzburg, 2012. http://d-nb.info/1026653401/34.

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Konikkat, Salini. "Dynamic Remodeling Events Drive the Removal of the ITS2 Spacer Sequence During Assembly of 60S Ribosomal Subunits in S. cerevisiae." Research Showcase @ CMU, 2016. http://repository.cmu.edu/dissertations/608.

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Ribosome assembly in eukaryotes require ~200 trans-acting proteins that drive the concerted processes of pre-rRNA processing and modification, RNA folding and rprotein binding. Previous work has identified the steps of ribosome assembly in which most trans-acting ‘assembly factors’ and r-proteins function. Yet, we are only beginning to understand the mechanistic details of remodeling events facilitated by assembly factors and r-proteins during ribosome assembly. The objective of my work is to understand mechanistic details underlying the removal of spacer sequences ITS1 and ITS2 in pre-ribosom
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Zhao, Xianming, Mingji Yang, Tingxian Zhou, and Liqun Meng. "SPREAD SPECTRUM COMMUNICATION SCHEME USING PHASESHIFTING SEQUENCE AND ITS PROPERTIES." International Foundation for Telemetering, 1998. http://hdl.handle.net/10150/609223.

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International Telemetering Conference Proceedings / October 26-29, 1998 / Town & Country Resort Hotel and Convention Center, San Diego, California<br>This paper analyzes the pseudo-random characteristic of m-sequence and proposes a spread spectrum communication scheme in which the phase-shifting sequences of msequence can be used as the spread spectrum code under given condition. Therefore, the available spread spectrum code set is expanded. It is theoretically proved that there are some advantages in using phase-shifting sequences instead of the conventional msequences or GOLD-sequences in sp
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Ярмоленко, Маріанна Володимирівна. "Біоінформатичний аналіз консервативних ділянок геномів промислових видів дріжджів". Магістерська робота, Київський національний університет технологій та дизайну, 2021. https://er.knutd.edu.ua/handle/123456789/19387.

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В дипломній магістерській роботі розглянуті дані молекулярно-генетичних i біоінформатичних методів дослідження геномів дріжджів задля оцінки їх біотехнологічного потенціалу за допомогою генетичної ідентифікації. Описані біоінформатичні методи дослідження геномів дріжджів для вивчення мікроеволюційного процессу шляхом порівняльного аналізу консервативних ділянок геному.<br>In the master's thesis the data of molecular genetic and bioinformatics methods of research of yeast genomes for estimation of their biotechnological potential by means of genetic identification are considered. Bioinformatics
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Clevinger, Jennifer Ann. "Systematics of Silphium and its subtribe Engelmanniinae (Asteraceae : Heliantheae) /." Digital version accessible at:, 1999. http://wwwlib.umi.com/cr/utexas/main.

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Chen, Yun-Shiow. "The changepoint problem in a multinomial sequence and its application /." The Ohio State University, 1988. http://rave.ohiolink.edu/etdc/view?acc_num=osu148759630735862.

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Hsieh, Ya-Ching. "Homals-clustering analysis and its applications in computational sequence analysis." Diss., Restricted to subscribing institutions, 2007. http://proquest.umi.com/pqdweb?did=1472131881&sid=1&Fmt=2&clientId=1564&RQT=309&VName=PQD.

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Hurst, Rebecca Eldridge Hurst. "Spiritual Quest as Poetic Sequence: Theodore Roethke's "North American Sequence" and its Relation to T S Eliot's "Four Quartets"." W&M ScholarWorks, 1997. https://scholarworks.wm.edu/etd/1539626121.

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Day, A. J. "Structural studies on complement factor H and its homologues." Thesis, University of Oxford, 1988. http://ethos.bl.uk/OrderDetails.do?uin=uk.bl.ethos.233434.

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Vaccari, Thomas. "Synthesis of thioenol ether functionalized cyclooctyne and its orthogonal cycloaddition sequence." Master's thesis, Alma Mater Studiorum - Università di Bologna, 2020. http://amslaurea.unibo.it/21705/.

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In this work, the synthesis of a new bifunctionalized cyclooctyne for a possible layer by layer surface functionalization is presented. The main objective is to find a more stable molecule than the literature known methyl enol ether substituted cyclooctyne. Accordingly, the two target functionalities are an internal alkyne group and a vinyl methyl sulfide group. The synthesis was achieved in 9 steps and consists first of all in the preparation of an aldehyde starting from 1,5-cyclooctadiene with a cyclopropanation reaction followed by a reduction and the SWERN oxidation to an aldehyde. The new
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Books on the topic "ITS2 sequence"

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Brown, L. F. Seismic / sequence stratigraphy: Its role in petroleum exploration. JAPEC, 1991.

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A, Kruckenberg-Goldenstein Lori, and Haug Andreas, eds. The sequences of Nidaros: A Nordic repertory & its European context. Tapir Academic Press, 2006.

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Isaac, M. J. The cretaceous sequence at Whatuwhiwhi, Northland, and its paleogeographic significance. New Zealand Geological Survey, 1988.

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Kim, Richard Hyung-Jun. Characterization of the human bone-sialoprotein BSP gene and its promoter sequence. National Library of Canada, 1993.

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Hütter, B. O. Neuropsychological Sequelae of Subarachnoid Hemorrhage and its Treatment. Springer Vienna, 2000. http://dx.doi.org/10.1007/978-3-7091-6327-6.

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Hütter, B. O. Neuropsychological sequelae of subarachnoid hemorrhage and its treatment. Springer, 2000.

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Tolley, Kurt Peter. Nucleotide sequence of the polymerase gene of a virulent pneumovirus and its attenuated derivative. typescript, 1994.

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Evans, Paul David. The interactions of the E.coli trp repressor with its operator DNA sequences. University of Birmingham, 1995.

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PennSound, ed. Dancing with Myself, in its entirety, on mp3 on PennSound. 3rd ed. PennSound, 2008.

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M, Güdel, Guinan E. F, and United States. National Aeronautics and Space Administration., eds. X-ray emission from the sun in its youth and old age. National Aeronautics and Space Administration, 1995.

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Book chapters on the topic "ITS2 sequence"

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Borman, Andrew M., and Elizabeth M. Johnson. "Sequence-based Identification and Classification of Fungi." In Trends in the systematics of bacteria and fungi. CABI, 2021. http://dx.doi.org/10.1079/9781789244984.0198.

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Abstract This book chapter describes the advantages and limitations of the ITS Region as a universal barcode for fungal identification. The ITS region offers several practical advantages as a universal fungal barcode region. The region encompasses segments that permit resolution at different taxonomic levels as it includes the highly conserved 5.8S rRNA gene, the moderately rapidly evolving ITS2 region and the rapidly evolving ITS1 region, flanked by the highly conserved SSU and LSU genes which permit design of PCR primers that are almost panfungal. Over the last two decades the sequence-based
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Tandon, Veena, Devendra Kumar Biswal, Pramod Kumar Prasad, and Chenkual Malsawmtluangi. "Reconstructing the Phylogenetic Relationships of the Cyclophyllidean Cestodes: A Case Study Using ITS2 rDNA and Sequence-Structure Alignment." In Biomedical Engineering Systems and Technologies. Springer Berlin Heidelberg, 2011. http://dx.doi.org/10.1007/978-3-642-18472-7_24.

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Rabin, Michael O. "The Information Dispersal Algorithm and its Applications." In Sequences. Springer New York, 1990. http://dx.doi.org/10.1007/978-1-4612-3352-7_32.

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Başar, Feyzi. "Double Sequences." In Summability Theory and Its Applications, 2nd ed. Chapman and Hall/CRC, 2022. http://dx.doi.org/10.1201/9781003294153-7.

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de Haan, A., G. Deegener, and M. A. Landolt. "Childhood Violence and Its Consequences." In Trauma Sequelae. Springer Berlin Heidelberg, 2022. http://dx.doi.org/10.1007/978-3-662-64057-9_7.

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de Haan, A., G. Deegener, and M. A. Landolt. "Childhood Violence and Its Consequences." In Trauma Sequelae. Springer Berlin Heidelberg, 2022. http://dx.doi.org/10.1007/978-3-662-64057-9_7.

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Başar, Feyzi. "Core of a Sequence." In Summability Theory and Its Applications, 2nd ed. Chapman and Hall/CRC, 2022. http://dx.doi.org/10.1201/9781003294153-6.

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Jeż, Artur, Anthony W. Lin, Oliver Markgraf, and Philipp Rümmer. "Decision Procedures for Sequence Theories." In Computer Aided Verification. Springer Nature Switzerland, 2023. http://dx.doi.org/10.1007/978-3-031-37703-7_2.

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AbstractSequence theories are an extension of theories of strings with an infinite alphabet of letters, together with a corresponding alphabet theory (e.g. linear integer arithmetic). Sequences are natural abstractions of extendable arrays, which permit a wealth of operations including append, map, split, and concatenation. In spite of the growing amount of tool support for theories of sequences by leading SMT-solvers, little is known about the decidability of sequence theories, which is in stark contrast to the state of the theories of strings. We show that the decidable theory of strings wit
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de la Peña, Víctor H., and Evarist Giné. "Conditionally Independent Sequences." In Probability and its Applications. Springer New York, 1999. http://dx.doi.org/10.1007/978-1-4612-0537-1_7.

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Başar, Feyzi, and Bipan Hazarika. "Bigeometric Calculus and Its Applications." In Non-Newtonian Sequence Spaces with Applications. Chapman and Hall/CRC, 2025. https://doi.org/10.1201/9781003600640-3.

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Conference papers on the topic "ITS2 sequence"

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Li, Ying, and Shu-Jui Yang. "Golay Complementary Sequences of All Sequence Lengths." In 2024 International Symposium on Information Theory and Its Applications (ISITA). IEEE, 2024. https://doi.org/10.23919/isita60732.2024.10858226.

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Harjanto, Shadifa Auliatama, and Ade Romadhony. "Question Template Extraction Using Sequence Labeling Approach." In 2024 International Conference on Data Science and Its Applications (ICoDSA). IEEE, 2024. http://dx.doi.org/10.1109/icodsa62899.2024.10651739.

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Prokhorova, E. E., and R. R. Usmanova. "GENETIC POLYMORPHISM OF SNAILS SUCCINEA PUTRIS (GASTROPODA, PULMONATA)." In V International Scientific Conference CONCEPTUAL AND APPLIED ASPECTS OF INVERTEBRATE SCIENTIFIC RESEARCH AND BIOLOGICAL EDUCATION. Tomsk State University Press, 2020. http://dx.doi.org/10.17223/978-5-94621-931-0-2020-33.

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Genotypic diversity of snails Succinea putris L. (Linnaeus, 1758) collected in the north-west of Russia and in the Republic of Belarus was analysed. Homology between the nucleotide sequences of snails from different population made up 100% by the nucleotide sequence of ITS1-5.8S-ITS2 region of rDNA. Genetic variability based on mitochondrial markers was insignificant. Average genetic distances between samples made up 0,009 for СOI gene loci and 0.008 for CytB gene loci. Was found ten haplotypes of the mitochondrial gene CytB and nine haplotypes of the mitochondrial gene СOI. Perhaps the geneti
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Rosa, Marcos P., Jose V. C. Vargas, Vanessa M. Kava, et al. "Hydrogen and Compounds With Biological Activity From Microalgae." In ASME 2019 13th International Conference on Energy Sustainability collocated with the ASME 2019 Heat Transfer Summer Conference. American Society of Mechanical Engineers, 2019. http://dx.doi.org/10.1115/es2019-3965.

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Abstract Microalgae have a high biotechnological potential as a source of biofuels (biodiesel, biohydrogen) and other high-added value products (e.g., pharmaceuticals, proteins, pigments). However, for microalgae cultivation to be economically competitive with other fuel sources, it is necessary to apply the concept of biorefinery. This seems to be the most ambitious strategy to achieve viability. Therefore, the objectives of this study were to isolate and identify the main microalgae line used to produce biofuels at Federal University of Parana, Brazil, using the rDNA sequence and micromorpho
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"SYSTEMATIC POSITION AND PHYLOGENETIC RELATIONSHIPS OF THE CYCLOPHYLLIDEAN CESTODES - An In-silico Study using ITS2 rDNA and Sequence-structure Alignment." In International Conference on Bioinformatics. SciTePress - Science and and Technology Publications, 2010. http://dx.doi.org/10.5220/0002690500050012.

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Hachisuka, Motoaki, Chika Sugimoto, and Ryuji Kohno. "Interference canseller method using hierarchical OMF against concatenated sequence." In 2012 12th International Conference on ITS Telecommunications (ITST). IEEE, 2012. http://dx.doi.org/10.1109/itst.2012.6425145.

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Tokuda, Taisei, Masaki Suzuki, Shohei Kanda, and Hiroshi Shigeno. "Velocity decision algorithm for platooning based on converging sequence and converging possibility." In 2011 11th International Conference on ITS Telecommunications (ITST). IEEE, 2011. http://dx.doi.org/10.1109/itst.2011.6060145.

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Tessema, Widist Bekulu, Keuchul Cho, Gihyuk Seong, Gisu Park, and Kijun Han. "Making channel hopping sequences for self-organized mobile networks." In 2013 13th International Conference on ITS Telecommunications (ITST). IEEE, 2013. http://dx.doi.org/10.1109/itst.2013.6685586.

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Shih-Ming Huang, Ching-Chun Huang, and Cheng-Chuan Chou. "Image registration among UAV image sequence and Google satellite image under quality mismatch." In 2012 12th International Conference on ITS Telecommunications (ITST). IEEE, 2012. http://dx.doi.org/10.1109/itst.2012.6425189.

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Nakayama, Yuichi, and Ryuji Kohno. "Novel variable spreading sequence length system for improving the processing speed of DS-UWB radar." In 2008 8th International Conference on ITS Telecommunications (ITST). IEEE, 2008. http://dx.doi.org/10.1109/itst.2008.4740286.

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Reports on the topic "ITS2 sequence"

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Steffenson, B. J., I. Mayrose, Gary J. Muehlbauer, and A. Sharon. ing and comparative sequence analysis of powdery mildew and leaf rust resistance gene complements in wild barley. United States-Israel Binational Agricultural Research and Development Fund, 2021. http://dx.doi.org/10.32747/2021.8134173.bard.

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Our overall, long-term goal is to exploit the genetic diversity present in cereal wild relatives for the development of cultivars with durable disease resistance. Our specific objectives for this proposal were to: 1) Utilize Association Genetics Resistance Gene Enrichment Sequencing (AgRenSeq) to identify and clone powdery mildew and leaf rust resistance gene complements in wild barley and 2) Conduct comparative sequence analyses of the cloned resistance genes to elucidate the basis of their specificity and evolution. The deployment of resistant cultivars is the most effective, economically ef
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Montville, Thomas J., and Roni Shapira. Molecular Engineering of Pediocin A to Establish Structure/Function Relationships for Mechanistic Control of Foodborne Pathogens. United States Department of Agriculture, 1993. http://dx.doi.org/10.32747/1993.7568088.bard.

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This project relates the structure of the bacteriocin molecule (which is genetically determined) to its antimicrobial function. We have sequenced the 19,542 bp pediocin plasmid pMD136 and developed a genetic transfer system for pediococci. The pediocin A operon is complex, containing putative structural, immunity, processing, and transport genes. The deduced sequence of the pediocin A molecule contains 44 amino acids and has a predicted PI of 9.45. Mechanistic studies compared the interaction of pediocin PA-1 and nisin with Listeria monocytgenes cells and model lipid systems. While significant
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3

Woltz, Dan J., and Michael K. Gardner. Memory for Processing Sequence in Cognitive Skills and its Role in Performance Errors. Defense Technical Information Center, 2000. http://dx.doi.org/10.21236/ada386833.

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4

Yaron, Zvi, Martin P. Schreibman, Abigail Elizur, and Yonathan Zohar. Advancing Puberty in the Black Carp (Mylopharyngodon Piceus) and the Striped Bass (Morone Saxatilis). United States Department of Agriculture, 1993. http://dx.doi.org/10.32747/1993.7568102.bard.

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The black carp (bc)GtH IIb cDNA was amplified and isolated, cloned and sequenced. Comparison of the bcGtH IIb deduced a.a. sequence with that of GtH IIb from other teleosts revealed high homology to cyprinid species and a lower homology to salmonid or perciform fish. The gene coding for the GtH IIb was isolated and sequenced. Three bc recombinant phages which hybridized to the goldfish GtH Ib cDNA probe were isolated and are currently being characterized. The region coding for the mature GtH IIb was expressed in a bacterial expression vector resulting in the production of a recombinant protein
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5

Wackett, Lawrence, Raphi Mandelbaum, and Michael Sadowsky. Bacterial Mineralization of Atrazine as a Model for Herbicide Biodegradation: Molecular and Applied Aspects. United States Department of Agriculture, 1999. http://dx.doi.org/10.32747/1999.7695835.bard.

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Atrazine is a broadly used herbicide in agriculture and it was used here as a model to study the biodegradation of herbicides. The bacterium Pseudomonas sp. ADP metabolizes atrazine to carbon dioxide and ammonia and chloride. The genes encoding atrazine catabolism to cyanuric acid were cloned and expressed in Escherichia coli. The genes were designated atzA, atzB and atzC. Each gene was sequenced. The enzyme activities were characterized. AtzA is atrazine chlorohydrolase which takes atrazine to hydroxyatrizine. AtzB is hydroxyatrazine N-ethylaminohydrolase which produces N-isopropylammelide an
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6

Varney, Peter J. Sequence Stratigraphy of the Dakota Sandstone, Eastern San Juan Basin, New Mexico, and its Relationship to Reservoir Compartmentalization. Office of Scientific and Technical Information (OSTI), 2002. http://dx.doi.org/10.2172/793620.

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Konsam, Manis Kumar, Amanda Thounajam, Prasad Vaidya, Gopikrishna A, Uthej Dalavai, and Yashima Jain. Machine Learning-Enhanced Control System for Optimized Ceiling Fan and Air Conditioner Operation for Thermal Comfort. Indian Institute for Human Settlements, 2024. http://dx.doi.org/10.24943/mlcsocfacotc6.2023.

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This paper proposes and tests the implementation of a sustainable cooling approach that uses a machine learning model to predict operative temperatures, and an automated control sequence that prioritises ceiling fans over air conditioners. The robustness of the machine learning model (MLM) is tested by comparing its prediction with that of a straight-line model (SLM) using the metrics of Mean Bias Error (MBE) and Root Mean Squared Error (RMSE). This comparison is done across several rooms to see how each prediction method performs when the conditions are different from those of the original ro
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Lers, Amnon, and Pamela J. Green. Analysis of Small RNAs Associated with Plant Senescence. United States Department of Agriculture, 2013. http://dx.doi.org/10.32747/2013.7593393.bard.

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Senescence is an agriculturally significant process due to its negative impact to crop yield and postharvest quality. The genetic regulatory systems controlling senescence induction and progress respond to both developmental and environmental stress signals and involve numerous gene expression changes. Knowledge about the key molecular factors which control senescence is very limited. MicroRNAs (miRNAs) are a class of small RNAs which typically function by guiding cleavage of target messenger RNAs. They have been shown to play major roles in a variety of plant processes including development,
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Mawassi, Munir, Adib Rowhani, Deborah A. Golino, Avichai Perl, and Edna Tanne. Rugose Wood Disease of Grapevine, Etiology and Virus Resistance in Transgenic Vines. United States Department of Agriculture, 2003. http://dx.doi.org/10.32747/2003.7586477.bard.

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Rugose wood is a complex disease of grapevines, which occurs in all growing areas. The disease is spread in the field by vector transmission (mealybugs). At least five elongated-phloem- limited viruses are implicated in the various rugose wood disorders. The most fully characterized of these are Grapevine virus A (GV A) and GVB, members of a newly established genus, the vitivirus. GVC, a putative vitivirus, is much less well characterized than GV A or GVB. The information regarding the role of GVC in the etiology and epidemiology of rugose wood is fragmentary and no sequence data for GVC are a
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Beachy, R. N. [Genetic engineering with a gene encoding a soybean storage protein to identify DNA sequences to control its expression]: Annual report, 1993. Office of Scientific and Technical Information (OSTI), 1993. http://dx.doi.org/10.2172/10133802.

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