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Journal articles on the topic 'JSim'

Author: Grafiati
Published: 28 May 2022
Last updated: 30 July 2025

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1

Harris, Christine R. "Male and Female Jealousy, Still More Similar than Different: Reply to Sagarin (2005)." Personality and Social Psychology Review 9, no. 1 (2005): 76–86. http://dx.doi.org/10.1207/s15327957pspr0901_6.

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Harris (2003b), reviewing evidence for the Jealousy as a Specific Innate Module (JSIM) theory, concluded that overall there is no support for innate sex differences in jealousy over sexual and emotional infidelity This article responds to Sagarin's challenges (this issue) by showing (a) JSIM proponents have not advocated Sagarin's attenuated version of JSIM; (b) studies using continuous measures do not support the original JSIM (the majorityfind no significant effects, and the effects that exist show varied patterns); (c) Sagarin's JSIM is untestable due to well-known scaling problems; (d) Sag
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2

Butterworth, Erik, Bartholomew E. Jardine, Gary M. Raymond, Maxwell L. Neal, and James B. Bassingthwaighte. "JSim, an open-source modeling system for data analysis." F1000Research 2 (December 30, 2013): 288. http://dx.doi.org/10.12688/f1000research.2-288.v1.

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JSim is a simulation system for developing models, designing experiments, and evaluating hypotheses on physiological and pharmacological systems through the testing of model solutions against data. It is designed for interactive, iterative manipulation of the model code, handling of multiple data sets and parameter sets, and for making comparisons among different models running simultaneously or separately. Interactive use is supported by a large collection of graphical user interfaces for model writing and compilation diagnostics, defining input functions, model runs, selection of algorithms
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3

Butterworth, Erik, Bartholomew E. Jardine, Gary M. Raymond, Maxwell L. Neal, and James B. Bassingthwaighte. "JSim, an open-source modeling system for data analysis." F1000Research 2 (May 12, 2014): 288. http://dx.doi.org/10.12688/f1000research.2-288.v2.

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JSim is a simulation system for developing models, designing experiments, and evaluating hypotheses on physiological and pharmacological systems through the testing of model solutions against data. It is designed for interactive, iterative manipulation of the model code, handling of multiple data sets and parameter sets, and for making comparisons among different models running simultaneously or separately. Interactive use is supported by a large collection of graphical user interfaces for model writing and compilation diagnostics, defining input functions, model runs, selection of algorithms
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4

Butterworth, Erik, Bartholomew E. Jardine, Gary M. Raymond, Maxwell L. Neal, and James B. Bassingthwaighte. "JSim, an open-source modeling system for data analysis." F1000Research 2 (July 1, 2014): 288. http://dx.doi.org/10.12688/f1000research.2-288.v3.

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JSim is a simulation system for developing models, designing experiments, and evaluating hypotheses on physiological and pharmacological systems through the testing of model solutions against data. It is designed for interactive, iterative manipulation of the model code, handling of multiple data sets and parameter sets, and for making comparisons among different models running simultaneously or separately. Interactive use is supported by a large collection of graphical user interfaces for model writing and compilation diagnostics, defining input functions, model runs, selection of algorithms
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5

Kobayashi, Shotai. "Fellow of JSIM Desired by Patients." Nihon Naika Gakkai Zasshi 97, no. 7 (2008): 1711–16. http://dx.doi.org/10.2169/naika.97.1711.

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6

Saku, Keijiro, Namiko Segawa, and Kaoru Hosoi. "Clinical Research and Fellow of JSIM." Nihon Naika Gakkai Zasshi 97, no. 10 (2008): 2590–95. http://dx.doi.org/10.2169/naika.97.2590.

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7

Miller, John A., Andrew F. Seila, and Xuewei Xiang. "The JSIM web-based simulation environment." Future Generation Computer Systems 17, no. 2 (2000): 119–33. http://dx.doi.org/10.1016/s0167-739x(99)00108-9.

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8

Jardine, Bartholomew, Gary M. Raymond, and James B. Bassingthwaighte. "Semi-automated Modular Program Constructor for physiological modeling: Building cell and organ models." F1000Research 4 (December 16, 2015): 1461. http://dx.doi.org/10.12688/f1000research.7476.1.

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The Modular Program Constructor (MPC) is an open-source Java based utility, built upon JSim's Mathematical Modeling Language (MML) (http://www.physiome.org/jsim/) that uses directives embedded in model code to construct larger, more complicated models quickly and with less error than manually combining models. A major obstacle in writing complex programs for modeling physiological processes is the large amount of time it takes to code the myriad processes taking place simultaneously in cells, tissues, and organs. MPC replaces this task by code-generating algorithms that take the code from seve
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9

Jardine, Bartholomew, Gary M. Raymond, and James B. Bassingthwaighte. "Semi-automated Modular Program Constructor for physiological modeling: Building cell and organ models." F1000Research 4 (April 6, 2016): 1461. http://dx.doi.org/10.12688/f1000research.7476.2.

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The Modular Program Constructor (MPC) is an open-source Java based modeling utility, built upon JSim's Mathematical Modeling Language (MML) (http://www.physiome.org/jsim/) that uses directives embedded in model code to construct larger, more complicated models quickly and with less error than manually combining models. A major obstacle in writing complex models for physiological processes is the large amount of time it takes to model the myriad processes taking place simultaneously in cells, tissues, and organs. MPC replaces this task with code-generating algorithms that take model code from s
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10

Jardine, Bartholomew, Gary M. Raymond, and James B. Bassingthwaighte. "Semi-automated Modular Program Constructor for physiological modeling: Building cell and organ models." F1000Research 4 (June 16, 2016): 1461. http://dx.doi.org/10.12688/f1000research.7476.3.

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The Modular Program Constructor (MPC) is an open-source Java based modeling utility, built upon JSim's Mathematical Modeling Language (MML) ( http://www.physiome.org/jsim/) that uses directives embedded in model code to construct larger, more complicated models quickly and with less error than manually combining models. A major obstacle in writing complex models for physiological processes is the large amount of time it takes to model the myriad processes taking place simultaneously in cells, tissues, and organs. MPC replaces this task with code-generating algorithms that take model code from
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11

Smith, L. P., E. Butterworth, J. B. Bassingthwaighte, and H. M. Sauro. "SBML and CellML translation in Antimony and JSim." Bioinformatics 30, no. 7 (2013): 903–7. http://dx.doi.org/10.1093/bioinformatics/btt641.

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12

Yasukawa, Masaki. "Required Practice of Hematological Disorders for Fellow of JSIM." Nihon Naika Gakkai Zasshi 98, no. 7 (2009): 1776–79. http://dx.doi.org/10.2169/naika.98.1776.

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13

Yamagata, Kunihiro, Chie Saito, Keigyo You, and Shuichi Tsuruoka. "Required Knowledge of Kidney Diseases for Fellow of JSIM." Nihon Naika Gakkai Zasshi 98, no. 11 (2009): 2930–34. http://dx.doi.org/10.2169/naika.98.2930.

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14

Lishner, David A., Shannon Nguyen, E. L. Stocks, and Emily J. Zillmer. "Are Sexual and Emotional Infidelity Equally Upsetting to Men and Women? Making Sense of Forced-Choice Responses." Evolutionary Psychology 6, no. 4 (2008): 147470490800600. http://dx.doi.org/10.1177/147470490800600412.

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Forced-choice measures that assess reactions to imagined sexual and emotional infidelity are ubiquitous in studies testing the Jealousy as a Specific Innate Module (JSIM) model. One potential problem with such measures is that they fail to identify respondents who find both forms of infidelity equally upsetting. To examine this issue, an experiment was conducted in which two groups of participants imagined a romantic infidelity after which participants in the first group used a traditional forced-choice measure to indicate whether they found sexual or emotional infidelity more upsetting. Parti
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15

Nomura, Hideki. "Fellow of JSIM as a Director for Under/Postgraduate Education." Nihon Naika Gakkai Zasshi 97, no. 6 (2008): 1382–86. http://dx.doi.org/10.2169/naika.97.1382.

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16

Hiyama, Keiko. "Fellow of JSIM and Subspecialties. The Role of Women Physicians." Nihon Naika Gakkai Zasshi 97, no. 11 (2008): 2826–31. http://dx.doi.org/10.2169/naika.97.2826.

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17

Kihara, Yasuki. "Fellow of JSIM and Care for Patients with Cardiovascular Disorders." Nihon Naika Gakkai Zasshi 98, no. 4 (2009): 918–20. http://dx.doi.org/10.2169/naika.98.918.

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18

Ishizuka, Tatsuo. "Fellow of JSIM and Pramary Care. Face Reality, and Future Prospects." Nihon Naika Gakkai Zasshi 98, no. 12 (2009): 3170–74. http://dx.doi.org/10.2169/naika.98.3170.

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19

Tanaka, Junta. "What a Respiratory Specialist can do as a Fellow of JSIM." Nihon Naika Gakkai Zasshi 98, no. 2 (2009): 447–52. http://dx.doi.org/10.2169/naika.98.447.

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20

Snyder, Charles, and Satish Nagula. "Reducing Sleepiness and Burnout in Subspecialty Fellows due to Non-Urgent Overnight Calls." Journal of Scientific Innovation in Medicine 2, no. 2 (2019): 1. http://dx.doi.org/10.29024/jsim.14.

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21

Pourkaviani, Shaliz, Xueying Zhang, Emily Spear, Rebecca Satty, Annemarie Stroustrup-Smith, and Madiline D’Agostino. "Correlation of Preterm Infant Salivary Cortisol Levels with Scores on the Neonatal Infant Stressor Scale." Journal of Scientific Innovation in Medicine 2, no. 2 (2019): 2. http://dx.doi.org/10.29024/jsim.15.

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22

Nagirimadugu, Ankita, Frederick Rozenshteyn, Ari Young, and Alan Tso. "Barriers in Completion of H. Pylori Eradication Testing in a Predominantly Underserved Hispanic Resident Clinic: a Quality Improvement Project." Journal of Scientific Innovation in Medicine 2, no. 2 (2019): 3. http://dx.doi.org/10.29024/jsim.16.

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23

Chuang, Philip, Ankita Nagirimadugu, Nelson Feliciano, and Amreen Dinani. "The Association of Impaired Lung Function and Nonalcoholic Fatty Liver Disease: a Sysematic Review and Meta-Analysis." Journal of Scientific Innovation in Medicine 2, no. 2 (2019): 4. http://dx.doi.org/10.29024/jsim.17.

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24

Gaulin, Charles, Setareh Alipourfetrati, Gustavo Contreras Anez, et al. "A Quality Project to Optimize Palliative Care Consultations in the Medical Intensive Care Unit." Journal of Scientific Innovation in Medicine 2, no. 2 (2019): 5. http://dx.doi.org/10.29024/jsim.18.

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25

Kam Sing, Ho, Jacqueline Sheehan, Lingling Wu, Bharat Narasimhan, and James Salonia. "Does obesity cost the Patient and the Hospital? Increased Thirty-Day Readmission and Resource Utilization Among Obese Patients with Acute Exacerbation of Chronic Obstructive Pulmonary Disease: A Propensity Score Match Analysis." Journal of Scientific Innovation in Medicine 2, no. 2 (2019): 6. http://dx.doi.org/10.29024/jsim.19.

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26

Manuel, Matthias, Prarthana Parthasarathy, Mrudula Premkumar, Roy Vega, and Lin Kin. "Pediatric Skin and Soft Tissue Infection Antibiogram and Antibiotics Prescription Pattern in the Pediatric Emergency and In-Patient Settings." Journal of Scientific Innovation in Medicine 2, no. 2 (2019): 7. http://dx.doi.org/10.29024/jsim.20.

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27

Warburton, Andrew, Randal Serafini, Benjamin Shuham, et al. "Leveraging NADAC to Steer Drug Formularies in Resource-Limited Clinics." Journal of Scientific Innovation in Medicine 2, no. 1 (2019): 5. http://dx.doi.org/10.29024/jsim.21.

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28

Roof, Scott A., Mingyang Gray, Annika Meyer, et al. "An Interactive Workshop to Increase Comfort and Knowledge Regarding Adult Tracheostomy Management: A Pilot Study." Journal of Scientific Innovation in Medicine 3, no. 3 (2020): 22. http://dx.doi.org/10.29024/jsim.51.

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29

Wang, Xutao, Jing Yuan, Xinyuan Wu, et al. "Higher‐Efficiency TOPCon Solar Cells in Mass Production Enabled by Laser‐Assisted Firing: Advanced Loss Analysis and Near‐Term Efficiency Potential." Progress in Photovoltaics: Research and Applications, May 2025. https://doi.org/10.1002/pip.3921.

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ABSTRACTThe tunnel oxide passivated contact (TOPCon) solar cell is predicted to dominate the photovoltaic market from the year 2024. The TOPCon efficiency is steadily increasing both in the lab and high‐volume production. A notable new manufacturing technology, laser‐assisted firing, has been shown to enhance the power conversion efficiency (PCE) of TOPCon solar cells. This enhanced contact firing technique includes a traditional co‐firing step, followed by a laser scanning process in conjunction with an applied reverse bias. In this work, we utilize the Jolywood Special Injected Metallization
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30

Raymond, Gary M., and James B. Bassingthwaighte. "Automating modular model construction using JSim." FASEB Journal 25, S1 (2011). http://dx.doi.org/10.1096/fasebj.25.1_supplement.863.9.

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31

CAHYAWATI, PUTU NITA. "EFFECT OF SIMVASTATIN ON HISTOPATHOLOGY OF THE HEART AFTER 5/6 SUBTOTAL NEPHRECTOMY." International Journal of Applied Pharmaceutics, September 23, 2019, 131–33. http://dx.doi.org/10.22159/ijap.2019.v11s5.t0105.

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Objective: This study aims to assess the condition of cardiac histopathology through hematoxylin-eosin staining in 5/6 subtotal nephrectomyconditions.Methods: Fifteen male Swiss mice aged 3–5 months will be grouped into 3 treatment groups, namely the nephrectomy group (JSN, n=5), shamoperation (JSO, n=5), and simvastatin 20 mg/kg body weight (JSIM, n=5). The histopathology of the heart will be assessed blindly. Severity is assessedbased on scoring using a scale (−) no damage, (+) mild, (++) medium, and (+++) heavy. Assessment of severity refers to the irregularity of the heartmuscle, increased
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32

Butterworth, Erik, and James B. Bassingthwaighte. "JSim: software for multiple hypothesis testing and model refinement." FASEB Journal 24, S1 (2010). http://dx.doi.org/10.1096/fasebj.24.1_supplement.1065.16.

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33

Raymond, Gary M., Erik A. Butterworth, and James B. Bassingthwaighte. "JSim: Mathematical Modeling for Organ Systems, Tissues, and Cells." FASEB Journal 21, no. 6 (2007). http://dx.doi.org/10.1096/fasebj.21.6.a827-c.

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34

"Please Join the Mailing List of the Fellows of the JSIM." Nihon Naika Gakkai Zasshi 99, no. 10 (2010): 2580. http://dx.doi.org/10.2169/naika.99.2580.

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35

"Please Join the Mailing List of the Fellows of the JSIM." Nihon Naika Gakkai Zasshi 99, no. 12 (2010): 3088. http://dx.doi.org/10.2169/naika.99.3088.

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36

Veress, A. I., G. M. Raymond, G. T. Gullberg, and J. B. Bassingthwaighte. "Left Ventricular Finite Element Model Bounded by a Systemic Circulation Model." Journal of Biomechanical Engineering 135, no. 5 (2013). http://dx.doi.org/10.1115/1.4023697.

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A series of models were developed in which a circulatory system model was coupled to an existing series of finite element (FE) models of the left ventricle (LV). The circulatory models were used to provide realistic boundary conditions for the LV models. This was developed for the JSim analysis package and was composed of a systemic arterial, capillary, and venous system in a closed loop with a varying elastance LV and left atria to provide the driving pressures and flows matching those of the FE model. Three coupled models were developed, a normal LV under normotensive aortic loading (116/80
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37

Gerber, Claire, Sarah Beth Badenhop, Ashwin V. Kumar, Marcela Alimin, and Nancy J. Pelaez. "JSIM modeling raises questions about calcium‐independent contractions of porcine pulmonary artery (PPA)." FASEB Journal 23, S1 (2009). http://dx.doi.org/10.1096/fasebj.23.1_supplement.769.1.

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38

Bassingthwaighte, James, Erik Butterworth, Bart Jardine, Gary Raymond, and Maxwell Neal. "JSim, an open‐source modeling system for data analysis and reproducibility in research (733.1)." FASEB Journal 28, S1 (2014). http://dx.doi.org/10.1096/fasebj.28.1_supplement.733.1.

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39

Mitra, Souparno, and Shalini Dutta. "Technology During Pandemics: Ecological Momentary Assessment as an Assessment Tool for Real Time Monitoring." Journal of Scientific Innovation in Medicine 4, no. 2 (2021). http://dx.doi.org/10.29024/jsim.98.

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40

Watanabe, Izumi, Franklin Sylvester, Van Don Williams, et al. "Improving Adherence to Daily Weight Orders on an Inpatient Pediatric Unit." Journal of Scientific Innovation in Medicine 4, no. 2 (2021). http://dx.doi.org/10.29024/jsim.97.

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41

Muthumanickam, Aruna, Jaydeep Mahasamudram, and Efrain Gonzalez. "Moraxella Peritonitis in a Non-Peritoneal Dialysis Patient." Journal of Scientific Innovation in Medicine 4, no. 2 (2021). http://dx.doi.org/10.29024/jsim.106.

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42

Muthumanickam, Aruna, Jaydeep Mahasamudram, and Valentina Moirangthem. "A Case of Recurrent Kaposi’s Sarcoma in an HIV-Negative Patient." Journal of Scientific Innovation in Medicine 4, no. 2 (2021). http://dx.doi.org/10.29024/jsim.107.

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43

Ekezie, Joy, and Diana Haddad. "New Onset Type-1 Diabetes Mellitus in a Toddler with SARS-CoV-2 Infection Presenting in Diabetic Ketoacidosis: A Case Report." Journal of Scientific Innovation in Medicine 4, no. 2 (2021). http://dx.doi.org/10.29024/jsim.110.

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44

Ekezie, Joy, Rasheedat Fawole, and Savita Manwani. "Atypical Presentation of Frontal Lobe Tumor (Glioblastoma) in an Adolescent: A Case Report." Journal of Scientific Innovation in Medicine 4, no. 2 (2021). http://dx.doi.org/10.29024/jsim.109.

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45

Rothman, Samuel, Souparno Mitra, and Vicente Liz. "My Silence Says It All: A Case Report and Literature Review of Catatonia in First Episode Psychosis." Journal of Scientific Innovation in Medicine 4, no. 2 (2021). http://dx.doi.org/10.29024/jsim.99.

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46

Ekezie, Joy, Raqibat Akiyode, Sujana Rachuri, and Roy Vega. "Use of Chest X-ray in the Evaluation of Acute Cough in the Pediatric Emergency Department of an Inner-City Hospital." Journal of Scientific Innovation in Medicine 4, no. 2 (2021). http://dx.doi.org/10.29024/jsim.108.

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47

Rothman, Samuel, Souparno Mitra, Hunter Baudier, and Vicente Liz. "Giving Neurons Relaxation after Hyperactivity: A Case Report and Literature Review of Post Ictal Catatonia." Journal of Scientific Innovation in Medicine 4, no. 2 (2021). http://dx.doi.org/10.29024/jsim.100.

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48

Khalifa, Mahmoud, Yara Adel Altahan, and Paavana Varanasi. "MPO-ANCA Associated Vasculitis Following COVID-19 Vaccination – A Case Report." Journal of Scientific Innovation in Medicine 4, no. 2 (2021). http://dx.doi.org/10.29024/jsim.101.

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49

Khalifa, Mahmoud, Yara Adel Altahan, and Paavana Varanasi. "Anticoagulation in Patients with End-Stage Renal Disease and Non-Valvular Atrial Fibrillation – Review Article." Journal of Scientific Innovation in Medicine 4, no. 2 (2021). http://dx.doi.org/10.29024/jsim.102.

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50

Ekezie, Joy, and Tanya Rogo. "COVID Re-Infection or Something Else? A Case Report." Journal of Scientific Innovation in Medicine 4, no. 2 (2021). http://dx.doi.org/10.29024/jsim.111.

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