Academic literature on the topic 'Megabase'
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Journal articles on the topic "Megabase"
McCormick, Douglas. "New Tricks Tame Megabase DNA Fragments." Nature Biotechnology 4, no. 12 (December 1986): 1054. http://dx.doi.org/10.1038/nbt1286-1054.
Full textKovacic, Roger T., Luca Comal, and Arnold J. Bendich. "Protection of megabase DNA from shearing." Nucleic Acids Research 23, no. 19 (1995): 3999–4000. http://dx.doi.org/10.1093/nar/23.19.3999.
Full textBailey, Nathanael G. "Visualization of the Effect of Assay Size on the Error Profile of Tumor Mutational Burden Measurement." Genes 13, no. 3 (February 26, 2022): 432. http://dx.doi.org/10.3390/genes13030432.
Full textGunderson, K., and G. Chu. "Pulsed-field electrophoresis of megabase-sized DNA." Molecular and Cellular Biology 11, no. 6 (June 1991): 3348–54. http://dx.doi.org/10.1128/mcb.11.6.3348-3354.1991.
Full textObukhov, S. P., and M. Rubinstein. "Scaling of megabase DNA undergoing gel electrophoresis." Journal de Physique II 3, no. 10 (October 1993): 1455–59. http://dx.doi.org/10.1051/jp2:1993212.
Full textDuke, T. A. J., and J. L. Viovy. "Simulation of megabase DNA undergoing gel electrophoresis." Physical Review Letters 68, no. 4 (January 27, 1992): 542–45. http://dx.doi.org/10.1103/physrevlett.68.542.
Full textGunderson, K., and G. Chu. "Pulsed-field electrophoresis of megabase-sized DNA." Molecular and Cellular Biology 11, no. 6 (June 1991): 3348–54. http://dx.doi.org/10.1128/mcb.11.6.3348.
Full textRaoult, D. "The 1.2-Megabase Genome Sequence of Mimivirus." Science 306, no. 5700 (November 19, 2004): 1344–50. http://dx.doi.org/10.1126/science.1101485.
Full textHahn, Peter J., Leanna Giddings, John Longo, Michael J. Lane, Jane Scalzi, and John Hozier. "Double-minute chromosomes as megabase cloning vehicles." Genetic Analysis: Biomolecular Engineering 9, no. 1 (February 1992): 17–25. http://dx.doi.org/10.1016/1050-3862(92)90025-z.
Full textZhang, Hong-Bin, Xinping Zhao, Xiaoling Ding, Andrew H. Paterson, and Rod A. Wing. "Preparation of megabase-size DNA from plant nuclei." Plant Journal 7, no. 1 (January 1995): 175–84. http://dx.doi.org/10.1046/j.1365-313x.1995.07010175.x.
Full textDissertations / Theses on the topic "Megabase"
Koeble, Konrad. "Electrophoresis of megabase DNA molecules." Thesis, University of Oxford, 1991. http://ethos.bl.uk/OrderDetails.do?uin=uk.bl.ethos.302890.
Full textPlummer, Alisa C. "Transcriptional mapping within a 1.7 megabase region of human chromosome 17Q21." DigitalCommons@Robert W. Woodruff Library, Atlanta University Center, 1999. http://digitalcommons.auctr.edu/dissertations/3019.
Full textEdmonds, V. L. "Gliding flight in megabats." Thesis, University of Cambridge, 2006. http://ethos.bl.uk/OrderDetails.do?uin=uk.bl.ethos.598761.
Full textHowie, Ross Allan. "Optical studies of dense hydrogen at multi-megabar pressures." Thesis, University of Edinburgh, 2013. http://hdl.handle.net/1842/8242.
Full textLourenço, Rodrigo Tristan. "Estrutura genomica de tres megabases de DNA genomico (shotugun) de Eucalyptus : conteudo nucleotidico, sequencias repetitivas e genes." [s.n.], 2004. http://repositorio.unicamp.br/jspui/handle/REPOSIP/316753.
Full textDissertação (mestrado) - Universidade Estadual de Campinas, Instituto de Biologia
Made available in DSpace on 2018-08-03T22:25:24Z (GMT). No. of bitstreams: 1 Lourenco_RodrigoTristan_M.pdf: 1426914 bytes, checksum: a25b14ff0d793c6c37d821a81cdb379c (MD5) Previous issue date: 2004
Resumo: Com o intuito de obter uma visão da estrutura e composição do genoma de Eucalyptus, sequenciou-se aleatoriamente cerca de 10.000 fragmentos de DNA genômico de Eucalyptus grandis obtidos por meio de seqüenciamento por fragmentação randômica de DNA (shotgun) de uma biblioteca genômica, totalizando mais de 3,0 Mb válidos (phred >=20), isto é, cerca de 0,5% do genoma (640 Mpb). Depois de selecionadas quanto ao tamanho e qualidade, estas seqüências foram analisadas em termos do seu conteúdo nucleotídico, presença de regiões repetitivas e número de genes. Para análise do conteúdo de bases guanidílicas e citidílicas (GC) e do conteúdo de seqüências repetitivas utilizou-se o programa RepeatMasker, o qual indicou que as 10 mil seqüências continham, em média, 40,15% de GC. Aproximadamente 1,4% das bases pertenciam a seqüências transponíveis, distribuídas em 310 elementos repetitivos interespersados, dentre os quais 299 eram retroelementos, principalmente LTRs (¿Long Terminal Repeats¿) e apenas 11 eram transposons. Também foram identificados 986 microssatélites e 1.636 seqüências de baixa complexidade. No total, cerca de 5,8% do genoma de Eucalyptus é composto por seqüências repetitivas. Para a identificação de genes putativos presentes, utilizou-se uma estratégia alternativa baseada na comparação deste banco genômico com bancos de ESTs (¿Expressed Sequence Tags¿) de Eucalyptus utilizando o programa GenESTate, nomeando os genes identificados de acordo com o resultado do ¿BLAST¿ (¿Basic Local Alignment Search Tool¿) encontrado para as ESTs. Também comparou-se todas as seqüências genômicas com o banco de dados não-redundante de proteínas do NCBI (¿National Center for Biotechnology Information¿) com o intuito de identificar outros genes. Aproximadamente 44 seqüências similares a ESTs foram identificadas, contabilizando 2% do total de pares de bases analisado. É importante ressaltar a identificação de íntrons e éxons, além de regiões promotoras, a partir desta comparação, visto que estas estruturas não podem ser identificadas em ESTs. Cerca de 166 genes foram identificados a partir da comparação de todas as seqüências com o banco de dados de proteínas do NCBI por meio do protocolo ¿blastx-nr¿. Também foram identificados genes putativos para 16 tRNAs utilizando o programa tRNAscan-SE. Este banco de dados genômicos poderá ser utilizado no âmbito do Projeto Genolytpus para guiar o processo de ancoragem do mapa genético com o mapa físico, no desenvolvimento de novos marcadores do tipo microssatélites e na identificação de regiões promotoras
Abstract: In this work we intended to obtain an overview of the structure and composition of the Eucalyptus genome by sample sequencing 10.000 genomic DNA fragments obtained from a shotgun genomic library from E. grandis, that represents 3,0 Mbp of the E. grandis genome. The reads were filtered by their quality and length (phred value >=20; length >=150) and analyzed for their nucleotide content, repetitive patterns, repetitive elements and gene content. The program RepeatMasker was used to analyze the %GC content and repetitive patterns and elements. The results indicate that on average the Eucalyptus genome is composed of 40.15% of GC. From the total of the bases sequenced approximately 1.4% were located in transposons, distributed in 310 interespersed repetitive genetic elements, among which 299 classified as retroelements, mainly LTRs. We also identified 986 microsatellites and 1636 low complexity sequences. 5.8% of the sequenced bases were located on repetitive sequences. We used an alternative approach to identify putative genes by comparing the genomic sequences with a Eucalyptus ESTs database using the GenESTate software. We attributed putative functions using a pipeline were the éxons of each gene were put togheter and compared with protein domains data banks. This procedure avoids the misleading results obtained when comparing DNA sequences with sequences deposited in GenBank. The sequences were clustered using the CAP3 software, resulting in 766 agrupamentos contíguos and 5428 singletos, the former showing an average of 1200 bp. These 766 agrupamentos contíguos were compared with more than 5,000 E. grandis ESTs from mature leaf tissue and 6,000 E. urophylla ESTs from xylem. From the 766 agrupamentos contíguos we found 44 that showed high similarity to some ESTs. The coding portion of the sequences accounted for around 2% of the total sequences. It is important to highlight that by this approach it was possible to identify íntrons and éxons, beside core promoter regions, which can¿t be identified in the ESTs. Other 166 possible genes were identified among the genomic sequences by using blastx-nr in NCBI. We also identified putative genes responsible for 16 tRNAs using the tRNAscan-SE software. These sequences are being used in the Genolyptus Project for the development of novel randomly distributed microsatellites markers, for the identification of promoter regions and will be used to assist in the development of overgo-probes to be applied in the anchoring of the genetic map to the physical ma
Mestrado
Genetica de Microorganismos
Mestre em Genética e Biologia Molecular
Tasker, Douglas George. "Megabar isentropic compression experiments (ICE) using high explosive pulsed power (HEPP)." Thesis, Loughborough University, 2006. http://ethos.bl.uk/OrderDetails.do?uin=uk.bl.ethos.487678.
Full textAquilanti, Giuliana. "Challenges for energy dispersive X-ray absorption spectroscopy at the ESRF : microsecond time resolution and Megabar pressures." Université Joseph Fourier (Grenoble), 2002. http://www.theses.fr/2002GRE10195.
Full textThis Thesis concerns the development of two different applications of energy-dispersive Xray absorption spectroscopy at the ESRF: time-resolved (TR) studies pu shed to the microsecond time resolution and high-pressure (HP) studies at the limit of the Megabar pressures. The work has been developed in two distinct parts, and the underlying theme has been the exploitation of the capabilities of an X-ray absorption spectrometer in dispersive geometry on a third generation synchrotron source. For TR studies, the study of the triplet excited state following a laser excitation of Ph(P20sH2)44- has been chosen to push the technique to the us time resolution. In the HP part, the suitability of the energy dispersive Xray absorption spectrometer for HP studies using diamond anvils cell is stressed. Sorne technical developments carried out on beamline ID24 are discussed. Finally, the most extensive scientific part concerns a combined X-ray absorption and diffraction study of InAs under pressure
Aquilanti, Giuliana. "Challenges pour la spectroscopie d'absorption X en dispersion d'énergie à l'ESRF: résolution temporelle à la microseconde et pressions au Megabar." Phd thesis, Université de Grenoble, 2002. http://tel.archives-ouvertes.fr/tel-00828730.
Full text(9820148), Luke Moertel. "Microarray analysis of the Schistosoma japonicum transcriptome." Thesis, 2006. https://figshare.com/articles/thesis/Microarray_analysis_of_the_Schistosoma_japonicum_transcriptome/13423745.
Full textKessler, Richard Eugene. "Analysis of multi-megabyte secondary CPU cache memories." 1991. http://catalog.hathitrust.org/api/volumes/oclc/25487251.html.
Full textTypescript. Vita. eContent provider-neutral record in process. Description based on print version record. Includes bibliographical references (leaves 253-260).
Books on the topic "Megabase"
Tully, Claus J. Mensch — Maschine — Megabyte. Wiesbaden: VS Verlag für Sozialwissenschaften, 2003. http://dx.doi.org/10.1007/978-3-322-93271-6.
Full textSymons, Ross. MegaBASIC: Extended basic for the commodore 64. London: Interface, 1985.
Find full textByrne, Charles. The Moon's Near Side Megabasin and Far Side Bulge. New York, NY: Springer New York, 2013. http://dx.doi.org/10.1007/978-1-4614-6949-0.
Full textHambly, Barbara. Die Chroniken von Windrose: Der Megabyte-Magier : Fantasy-Roman. Bergisch Gladbach: Bastei-Verl. Lübbe, 1994.
Find full textWhitaker, David. CD-ROM and the migration from print: The 500 megabyte solution. London: CLSI, 1987.
Find full textFomin, A. N. Katagenez organicheskogo veshchestva i neftegazonosnostʹ mezozoĭskikh i paleozoĭskikh otlozheniĭ Zapadno-Sibirskogo megabasseĭna = Catagenesis of organic matter and petroleum potential of Mesozoic and Paleozoic deposits of the West Siberian megabasin. Novosibirsk: INGG SO RAN, 2011.
Find full textBook chapters on the topic "Megabase"
Cantor, Charles R., Larysa Pevny, and Cassandra L. Smith. "Organization and Evolution of Genomes as seen from a Megabase Perspective." In Evolutionary Tinkering in Gene Expression, 143–53. Boston, MA: Springer US, 1989. http://dx.doi.org/10.1007/978-1-4684-5664-6_14.
Full textPikaard, Craig S. "Nucleolar dominance: uniparental gene silencing on a multi-megabase scale in genetic hybrids." In Plant Gene Silencing, 43–57. Dordrecht: Springer Netherlands, 2000. http://dx.doi.org/10.1007/978-94-011-4183-3_3.
Full textKaykov, Atanas, and Paul Nurse. "Analysis of Fission Yeast Single DNA Molecules on the Megabase Scale Using DNA Combing." In Methods in Molecular Biology, 9–24. New York, NY: Springer New York, 2018. http://dx.doi.org/10.1007/978-1-4939-7546-4_2.
Full textAudit, Benjamin, Lamia Zaghloul, Antoine Baker, Alain Arneodo, Chun-Long Chen, Yves d’Aubenton-Carafa, and Claude Thermes. "Megabase Replication Domains Along the Human Genome: Relation to Chromatin Structure and Genome Organisation." In Subcellular Biochemistry, 57–80. Dordrecht: Springer Netherlands, 2012. http://dx.doi.org/10.1007/978-94-007-4525-4_3.
Full textHerrmann, Reinhold G., Regina Martin, Winfried Busch, Michael Kleine, Christian Eibl, Gerhard Wanner, and Christian Jung. "Chromosome Microdissection and Megabase Technology in Plant Genome Analysis; Plant Chromosomes and Genes at High Resolution." In Plant Molecular Biology, 511–25. Berlin, Heidelberg: Springer Berlin Heidelberg, 1994. http://dx.doi.org/10.1007/978-3-642-78852-9_47.
Full textWeik, Martin H. "megabyte." In Computer Science and Communications Dictionary, 998. Boston, MA: Springer US, 2000. http://dx.doi.org/10.1007/1-4020-0613-6_11307.
Full textWeik, Martin H. "megabyte per second." In Computer Science and Communications Dictionary, 998. Boston, MA: Springer US, 2000. http://dx.doi.org/10.1007/1-4020-0613-6_11308.
Full textGiorgetti, Luca, Tristan Piolot, and Edith Heard. "High-Resolution 3D DNA FISH Using Plasmid Probes and Computational Correction of Optical Aberrations to Study Chromatin Structure at the Sub-megabase Scale." In Methods in Molecular Biology, 37–53. New York, NY: Springer New York, 2014. http://dx.doi.org/10.1007/978-1-4939-2253-6_3.
Full textTully, Claus J. "Warum sich Soziologie mit Technik beschäftigt." In Mensch — Maschine — Megabyte, 9–28. Wiesbaden: VS Verlag für Sozialwissenschaften, 2003. http://dx.doi.org/10.1007/978-3-322-93271-6_1.
Full textTully, Claus J. "Technik — Deutungen ihrer Entwicklung." In Mensch — Maschine — Megabyte, 29–97. Wiesbaden: VS Verlag für Sozialwissenschaften, 2003. http://dx.doi.org/10.1007/978-3-322-93271-6_2.
Full textConference papers on the topic "Megabase"
Figueiredo, Marco Antonio C. de, Edans F. de O. Sandes, and Alba Cristina M. A. de Melo. "Parallel Megabase DNA Sequence Comparison with OpenCL." In 2015 IEEE 22nd International Conference on High Performance Computing (HiPC). IEEE, 2015. http://dx.doi.org/10.1109/hipc.2015.13.
Full textde O. Sandes, Edans F., Guillermo Miranda, Alba C. M. A. Melo, Xavier Martorell, and Eduard Ayguade. "Fine-grain parallel megabase sequence comparison with multiple heterogeneous GPUs." In the 19th ACM SIGPLAN symposium. New York, New York, USA: ACM Press, 2014. http://dx.doi.org/10.1145/2555243.2555280.
Full textChen, Ellson Y. "Megabase sequencing of human genome by ordered-shotgun-sequencing (OSS) strategy." In BiOS '97, Part of Photonics West, edited by Gerald E. Cohn and Steven A. Soper. SPIE, 1997. http://dx.doi.org/10.1117/12.274362.
Full textErliandri, Indri. "Abstract 3471: Replication of megabase-size alpha-satellite DNA arrays in human centromere." In Proceedings: AACR Annual Meeting 2017; April 1-5, 2017; Washington, DC. American Association for Cancer Research, 2017. http://dx.doi.org/10.1158/1538-7445.am2017-3471.
Full textBoukerche, Azzedine, Rodolfo Bezerra Batista, and Alba Cristina Magalhaes Alves de Melo. "Exact pairwise alignment of megabase genome biological sequences using a novel z-align parallel strategy." In Distributed Processing (IPDPS). IEEE, 2009. http://dx.doi.org/10.1109/ipdps.2009.5161113.
Full textLau, Billy, John Bell, Stephanie Greer, Grace Zheng, Christina Wood, and Hanlee Ji. "Abstract 3603: Megabase-scale determination of complex genetic aberrations of primary cancer genomes at individual DNA molecule resolution." In Proceedings: AACR 107th Annual Meeting 2016; April 16-20, 2016; New Orleans, LA. American Association for Cancer Research, 2016. http://dx.doi.org/10.1158/1538-7445.am2016-3603.
Full textLau, Billy, John M. Bell, Michael Schnall-Levin, Mirna Jarosz, Erik Hopmans, Christina M. Wood, Grace X. Zheng, Kristina Giorda, and Hanlee P. Ji. "Abstract 4882: Megabase-scale phased haplotypes of genetic aberrations from whole cancer genome sequencing of primary colorectal tumors." In Proceedings: AACR 106th Annual Meeting 2015; April 18-22, 2015; Philadelphia, PA. American Association for Cancer Research, 2015. http://dx.doi.org/10.1158/1538-7445.am2015-4882.
Full textGreer, Stephanie, Lincoln Nadauld, Billy Lau, Laura Miotke, Erik Hopmans, Christina M. Wood, John M. Bell, David A. Jones, and Hanlee P. Ji. "Abstract 1436: Identification of novel tumor suppressor candidates in familial cholangiocarcinoma using sequencing-based Megabase-scale haplotypes from germline and cancer genomes." In Proceedings: AACR Annual Meeting 2017; April 1-5, 2017; Washington, DC. American Association for Cancer Research, 2017. http://dx.doi.org/10.1158/1538-7445.am2017-1436.
Full textRamsey, Marc C., and Robert W. Pitz. "Megabar cavitation collapse." In 2012 IEEE 39th International Conference on Plasma Sciences (ICOPS). IEEE, 2012. http://dx.doi.org/10.1109/plasma.2012.6383511.
Full textRobbins, Jamey, and Chuck Ernst. "A 130mm 4.6 Gbyte MO Disk Compatible with the 2.6 Gbyte MO Disk." In Symposium on Optical Memory. Washington, D.C.: Optica Publishing Group, 1996. http://dx.doi.org/10.1364/isom.1996.otua.1.
Full textReports on the topic "Megabase"
Crkvenjakov, R., and R. Drmanac. Sequencing of megabase plus DNA by hybridization: Method development ENT. Final technical progress report. Office of Scientific and Technical Information (OSTI), January 1991. http://dx.doi.org/10.2172/10143707.
Full textKaragosian, Deborah S. The Megabyte Will Always Get Through. Fort Belvoir, VA: Defense Technical Information Center, May 2012. http://dx.doi.org/10.21236/ada566185.
Full textWeir, S. T., W. J. Nellis, and A. C. Mitchell. Electrical conductivity of hydrogen shocked to megabar pressures. Office of Scientific and Technical Information (OSTI), August 1993. http://dx.doi.org/10.2172/10179599.
Full textParker, Jason, and Fred Schauer. Data Analysis and Compression Techniques for Megabyte-Data PDE Experiments. Fort Belvoir, VA: Defense Technical Information Center, January 2003. http://dx.doi.org/10.21236/ada454352.
Full textRuoff, A. L. Studies of the III-V compounds in the megabar regime. Office of Scientific and Technical Information (OSTI), January 1992. http://dx.doi.org/10.2172/7111464.
Full textSlough, John. Inductively Driven, 3D Liner Compression of a Magnetized Plasma to Megabar Energy Densities. Office of Scientific and Technical Information (OSTI), February 2015. http://dx.doi.org/10.2172/1172154.
Full textLorenzana, H. E., C. S. Yoo, M. Lipp, T. III Barbee, A. K. McMahan, and C. Mailhiot. Novel high energy density materials: Synthesis by megabar hot pressing. LDRD final report. Office of Scientific and Technical Information (OSTI), April 1996. http://dx.doi.org/10.2172/231384.
Full textRuoff, A. L. Studies of the III-V compounds in the megabar regime. Technical progress report. Office of Scientific and Technical Information (OSTI), September 1992. http://dx.doi.org/10.2172/10169845.
Full textRuoff, A. L. Studies of the III-V compounds in the megabar regime. Annual technical progress report. Office of Scientific and Technical Information (OSTI), June 1994. http://dx.doi.org/10.2172/10154543.
Full textRuoff, A. L. Studies of III-V compounds in the megabar regime: Annual progress report (second year). Office of Scientific and Technical Information (OSTI), April 1989. http://dx.doi.org/10.2172/6237503.
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