Academic literature on the topic 'Methionine conjugation'

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Journal articles on the topic "Methionine conjugation"

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Li, Yang, Chenshan Lian, Zhanfeng Hou, et al. "Intramolecular methionine alkylation constructs sulfonium tethered peptides for protein conjugation." Chemical Communications 56, no. 26 (2020): 3741–44. http://dx.doi.org/10.1039/d0cc00377h.

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Elledge, Susanna K., Hai L. Tran, Alec H. Christian, et al. "Systematic identification of engineered methionines and oxaziridines for efficient, stable, and site-specific antibody bioconjugation." Proceedings of the National Academy of Sciences 117, no. 11 (2020): 5733–40. http://dx.doi.org/10.1073/pnas.1920561117.

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The field of chemical modification of proteins has been dominated by random modification of lysines or more site-specific labeling of cysteines, each with attendant challenges. Recently, we have developed oxaziridine chemistry for highly selective modification of methionine called redox-activated chemical tagging (ReACT) but have not broadly tested the molecular parameters for efficient and stable protein modification. Here we systematically scanned methionines throughout one of the most popular antibody scaffolds, trastuzumab, used for antibody engineering and drug conjugation. We tested the expression, reactivities, and stabilities of 123 single engineered methionines distributed over the surface of the antibody when reacted with oxaziridine. We found uniformly high expression for these mutants and excellent reaction efficiencies with a panel of oxaziridines. Remarkably, the stability to hydrolysis of the sulfimide varied more than 10-fold depending on temperature and the site of the engineered methionine. Interestingly, the most stable and reactive sites were those that were partially buried, presumably because of their reduced access to water. There was also a 10-fold variation in stability depending on the nature of the oxaziridine, which was determined to be inversely correlated with the electrophilic nature of the sulfimide. Importantly, the stabilities of the best analogs were sufficient to support their use as antibody drug conjugates and potent in a breast cancer mouse xenograft model over a month. These studies provide key parameters for broad application of ReACT for efficient, stable, and site-specific antibody and protein bioconjugation to native or engineered methionines.
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KARMAKAR, SUBHENDU, SUDIPTA BHATTACHARYYA, and ARINDAM MUKHERJEE. "Effect of methionine and glucosamine conjugation on the anticancer activity of aromatic dinitrobenzamide mustards." Journal of Chemical Sciences 128, no. 3 (2016): 401–13. http://dx.doi.org/10.1007/s12039-015-1019-3.

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Ide, T., M. Horii, K. Kawashima, and T. Yamamoto. "Bile acid conjugation and hepatic taurine concentration in rats fed on pectin." British Journal of Nutrition 62, no. 3 (1989): 539–50. http://dx.doi.org/10.1079/bjn19890056.

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A relationship between bile acid conjugation and hepatic taurine concentration was investigated in rats fed on citrus pectin. When rats were fed on the diets containing varying amounts of pectin (10, 30, 60 and 100 g/kg dietary levels), biliary excretion of bile acids increased as the dietary levels of pectin increased. The increase was entirely due to the glycine-conjugated bile acids. The biliary excretion of taurine-conjugated bile acid was somewhat decreased as the dietary level of the fibre increased. Consequently, most of the bile acids were conjugated with glycine in rats fed on the diet containing 100 g pectin/kg. On the other hand, dietary cellulose (60 and 100 g/kg) did not affect the biliary bile acid excretions. The major proportion of bile acids in rats receiving a fibre-free diet and the diets containing cellulose were conjugated with taurine. Hepatic taurine concentrations decreased as the dietary levels of pectin, but not of cellulose, increased. Although dietary pectin (100 g/kg) also slightly decreased the taurine concentration in the kidney, those concentrations in other non-hepatic tissues examined (heart, brain and serum) were unaffected by the dietary fibre. Supplementation of the diet containing 100 g pectin/kg with methionine (10 g/kg) and taurine (10 and 50 g/kg) strikingly increased hepatic taurine concentrations. In this situation, the conjugation of bile acid with glycine was almost abolished and taurine conjugates became abundant in the bile of these animals. It is suggested that dietary pectin mediated an increase in the biliary bile acid excretion which may have depleted the hepatic pool of taurine available for bile acid conjugation and, thus, increased glycine conjugation of bile acids.
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Angelico, M., C. Gandin, A. Nistri, L. Baiocchi, and L. Capocaccia. "Oral S-adenosyl-L-methionine (SAMe) administration enhances bile salt conjugation with taurine in patients with liver cirrhosis." Scandinavian Journal of Clinical and Laboratory Investigation 54, no. 6 (1994): 459–64. http://dx.doi.org/10.3109/00365519409085470.

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Al-Badu, L. E., O. Smirnov, and L. Kalachniuk. "Dietetic ingredients of small animals suffering from obesity and their biological role." Scientific Messenger of LNU of Veterinary Medicine and Biotechnologies 20, no. 92 (2018): 3–7. http://dx.doi.org/10.32718/nvlvet9201.

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Obesity is a medical condition in which excess body fat has accumulated to the extent that it may have a negative effect on health. The daily ration of an adult cat must contain 40–45% of proteins, 20–25% of fats, 25–30% of carbohydrates. Low- fat diets are recommended to cats with overweight. Necessary amino acids are in the diet of cats with excess weight. Taurine is a sulfonic acid, which synthesizes in the body of animals and humans from the amino acid of cysteine. It plays an essential role in the digestion and assimilation of fats and lipids. The need for cats in taurine is due to their limited ability to synthesize taurine from amino acids that contain sulfur, as well as the fact that it holds bile acids. The latter is very important because cats do not produce bile acid salts associated with glycine, even in the case of taurine deficiency. Taurine has many fundamental biological roles, such as conjugation of bile acids, antioxidation, osmoregulation, membrane stabilization, and modulation of calcium signaling. It is essential for cardiovascular function, and development and function of skeletal muscle, the retina, and the central nervous system. The deficiency of taurine leads to degeneration of the retina and blindness, deafness, cardiomyopathy, disorders in the functioning of the immune and reproductive systems, suppression of neonatal growth, and the occurrence of birth defects. The recommended amount for a cat per day is 100–200 mg. L-Tryptophan is an α-amino acid that is used in the biosynthesis of proteins. Together with vitamin B6, magnesium and niacin, tryptophan is responsible for the serotonin production in the brain (a mediator that regulates the activity of nerve cells and transmits signals between them). Also, tryptophan is involved in the production of hemoglobin and affects the reproductive function of animals. The recommended amount for a cat per day is 0.3 g/1000 kcal of energy value (EV). DL-methionine is a synthetic analog of natural methionine. Methionine is an essential amino acid for animals. As the substrate for other amino acids such as cysteine and taurine, and the important antioxidant glutathione, methionine plays a critical role in the metabolism and health of many species, including humans. Methionine is a source of sulfur that forms the keratin protein. Keratin is simply necessary for the health of the hair, skin, and claws of the animal. The recommended amount for a cat per day (methionine + cystine) is 1.5 g/1000 kcal EV. Nowadays the problem of overweight in small domestic animals, in particular in cats and dogs, is becoming more widespread. In order to prevent the spread of obesity, therapeutic rations should be balanced by all indicators, such as proteins, fats, carbohydrates, amino acids, minerals, and vitamins.
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Dong, Shi-Hui, Nicole D. Frane, Quin H. Christensen, E. Peter Greenberg, Rajesh Nagarajan, and Satish K. Nair. "Molecular basis for the substrate specificity of quorum signal synthases." Proceedings of the National Academy of Sciences 114, no. 34 (2017): 9092–97. http://dx.doi.org/10.1073/pnas.1705400114.

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In severalProteobacteria, LuxI-type enzymes catalyze the biosynthesis of acyl–homoserine lactones (AHL) signals usingS-adenosyl–l-methionine and either cellular acyl carrier protein (ACP)-coupled fatty acids or CoA–aryl/acyl moieties as progenitors. Little is known about the molecular mechanism of signal biosynthesis, the basis for substrate specificity, or the rationale for donor specificity for any LuxI member. Here, we present several cocrystal structures of BjaI, a CoA-dependent LuxI homolog that represent views of enzyme complexes that exist along the reaction coordinate of signal synthesis. Complementary biophysical, structure–function, and kinetic analysis define the features that facilitate the unusual acyl conjugation withS-adenosylmethionine (SAM). We also identify the determinant that establishes specificity for the acyl donor and identify residues that are critical for acyl/aryl specificity. These results highlight how a prevalent scaffold has evolved to catalyze quorum signal synthesis and provide a framework for the design of small-molecule antagonists of quorum signaling.
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Coulombe, Philippe, Geneviève Rodier, Eric Bonneil, Pierre Thibault, and Sylvain Meloche. "N-Terminal Ubiquitination of Extracellular Signal-Regulated Kinase 3 and p21 Directs Their Degradation by the Proteasome." Molecular and Cellular Biology 24, no. 14 (2004): 6140–50. http://dx.doi.org/10.1128/mcb.24.14.6140-6150.2004.

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ABSTRACT Extracellular signal-regulated kinase 3 (ERK3) is an unstable mitogen-activated protein kinase homologue that is constitutively degraded by the ubiquitin-proteasome pathway in proliferating cells. Here we show that a lysineless mutant of ERK3 is still ubiquitinated in vivo and requires a functional ubiquitin conjugation pathway for its degradation. Addition of N-terminal sequence tags of increasing size stabilizes ERK3 by preventing its ubiquitination. Importantly, we identified a fusion peptide between the N-terminal methionine of ERK3 and the C-terminal glycine of ubiquitin in vivo by tandem mass spectrometry analysis. These findings demonstrate that ERK3 is conjugated to ubiquitin via its free NH2 terminus. We found that large N-terminal tags also stabilize the expression of the cell cycle inhibitor p21 but not that of substrates ubiquitinated on internal lysine residues. Consistent with this observation, lysineless p21 is ubiquitinated and degraded in a ubiquitin-dependent manner in intact cells. Our results suggests that N-terminal ubiquitination is a more prevalent modification than originally recognized.
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Nojoumi, Saba, Ying Ma, Sergej Schwagerus, Christian P. R. Hackenberger, and Nediljko Budisa. "In-Cell Synthesis of Bioorthogonal Alkene Tag S-Allyl-Homocysteine and Its Coupling with Reprogrammed Translation." International Journal of Molecular Sciences 20, no. 9 (2019): 2299. http://dx.doi.org/10.3390/ijms20092299.

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In this study, we report our initial results on in situ biosynthesis of S-allyl-l-homocysteine (Sahc) by simple metabolic conversion of allyl mercaptan in Escherichia coli, which served as the host organism endowed with a direct sulfhydration pathway. The intracellular synthesis we describe in this study is coupled with the direct incorporation of Sahc into proteins in response to methionine codons. Together with O-acetyl-homoserine, allyl mercaptan was added to the growth medium, followed by uptake and intracellular reaction to give Sahc. Our protocol efficiently combined the in vivo synthesis of Sahc via metabolic engineering with reprogrammed translation, without the need for a major change in the protein biosynthesis machinery. Although the system needs further optimisation to achieve greater intracellular Sahc production for complete protein labelling, we demonstrated its functional versatility for photo-induced thiol-ene coupling and the recently developed phosphonamidate conjugation reaction. Importantly, deprotection of Sahc leads to homocysteine-containing proteins—a potentially useful approach for the selective labelling of thiols with high relevance in various medical settings.
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Šarić, Mirela, Anke Vahrmann, Daniela Niebur, Verena Kluempers, Adrian B. Hehl та Henning Scholze. "Dual Acylation Accounts for the Localization of α19-Giardin in the Ventral Flagellum Pair of Giardia lamblia". Eukaryotic Cell 8, № 10 (2009): 1567–74. http://dx.doi.org/10.1128/ec.00136-09.

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ABSTRACT A Giardia-specific protein family denominated as α-giardins, represents the major protein component, besides tubulin, of the cytoskeleton of the human pathogenic parasite Giardia lamblia. One of its members, α19-giardin, carries an N-terminal sequence extension of MGCXXS, which in many proteins serves as a target for dual lipid conjugation: myristoylation at the glycine residue after removal of the methionine and palmitoylation at the cysteine residue. As the first experimental evidence of a lipid modification, we found α19-giardin to be associated with the membrane fraction of disrupted trophozoites. After heterologous coexpression of α19-giardin with giardial N-myristoyltransferase (NMT) in E scherichia coli, we found the protein in a myristoylated form. Additionally, after heterologous expression together with the palmitoyl transferase Pfa3 in Saccharomyces cerevisiae, α19-giardin associates with the membrane of the main vacuole. Immunocytochemical colocalization studies on wild-type Giardia trophozoites with tubulin provide evidence that α19-giardin exclusively localizes to the ventral pair of the giardial flagella. A mutant in which the putatively myristoylated N-terminal glycine residue was replaced by alanine lost this specific localization. Our findings suggest that the dual lipidation of α19-giardin is responsible for its specific flagellar localization.
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Dissertations / Theses on the topic "Methionine conjugation"

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Lukamto, Daniel Hartoyo. "Applications of hypervalent iodine reagents : from enantioselective copper-catalysed arylation-semipinacol cascade to methionine functionalisation for peptide macrocyclisation." Thesis, University of Cambridge, 2018. https://www.repository.cam.ac.uk/handle/1810/283560.

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The unifying theme of this thesis is the exploitation of the reactivity of aryliodonium salts as electrophile transfer reagents. In the first part of the thesis, diaryliodonium salts are employed as arylation reagents for the enantioselective copper-catalysed arylative semipinacol rearrangement (SPR) of various tertiary allylic alcohols. This cascade reaction is a rare example of asymmetrically activating SPR using carbon electrophiles. Different substrate classes - including dihydropyran, indene and dihydronaphthalene moieties - are converted to enantioenriched beta-aryl spirocyclic ketones in excellent yields and enantioselectivities, and often as a single diastereomer. These are in turn useful functional handles for transformations into other moieties, including further rearrangements via Baeyer-Villiger oxidation. In the second part of this thesis, a two-step process for the macrocyclisation of native peptides via a non-natural linkage is developed. This study exploits previous work conducted in the group on the use of aryliodonium salts as methionine-selective diazoacetate transfer reagents. The functionalised methionine is in turn used for an intramolecular rhodium-catalysed insertion into tryptophan. Eventual translation onto solid-phase enables facile access into various macrocyclic peptides.
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Books on the topic "Methionine conjugation"

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Chan, W., and Peter White, eds. Fmoc Solid Phase Peptide Synthesis. Oxford University Press, 1999. http://dx.doi.org/10.1093/oso/9780199637256.001.0001.

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In the years since the publication of Atherton and Sheppard's volume, the technique of Fmoc solid-phase peptide synthesis has matured considerably and is now the standard approach for the routine production of peptides. The basic problems outstanding at the time of publication of this earlier work have now been, for the most part, solved. As a result, innovators in the field have focussed their efforts to develop methodologies and chemistry for the synthesis of more complex structures. The focus of this new volume is much broader, and covers not only the essential procedures for the production of linear peptides but also more advanced techniques for preparing cyclic, side-chain modified, phospho- and glycopeptides. Many other methods also deserving attention have been included: convergent peptide synthesis; peptide-protein conjugation; chemoselective ligation; and chemoselective purification. The difficult preparation of cysteine and methionine-containing peptides is also covered, as well as methods for overcoming aggregation during peptide chain assembly and a survey of available automated instrumentation.
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