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Journal articles on the topic 'Microbial genetics'

Author: Grafiati

Published: 4 June 2021

Last updated: 25 July 2025

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1

Brown, P. R. "Modern microbial genetics." FEBS Letters 303, no. 1 (1992): 94–95. http://dx.doi.org/10.1016/0014-5793(92)80486-z.

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2

Gowland, Pete. "Modern microbial genetics." Trends in Biochemical Sciences 17, no. 8 (1992): 323. http://dx.doi.org/10.1016/0968-0004(92)90449-j.

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3

Skovgaard, Niels. "Modern Microbial Genetics." International Journal of Food Microbiology 84, no. 3 (2003): 345. http://dx.doi.org/10.1016/s0168-1605(02)00445-2.

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4

Akram, Muhammad, Isaac John Umaru, Abid Mahmood, et al. "Microbial Genetics: Foundations, Applications, and Future Directions in Science and Biotechnology." African Journal of Biochemistry and Molecular Biology Research 2, no. 2 (2025): 224–31. https://doi.org/10.58578/ajbmbr.v2i2.5652.

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This field is essential to comprehending not just basic biological processes but also how they are used in biotechnology, agriculture, and medicine. Microbial genetics is the study of genetic material, which includes horizontal gene transfer, DNA replication, gene expression, and mutation. Many microorganisms, in contrast to larger species, have genomes that are small and relatively basic, enabling researchers to accurately examine the regulation and function of genes. Mechanisms like transformation, transduction, and conjugation, which speed up the acquisition and spread of genetic characteri

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5

Del Duca, Sara, Alberto Vassallo, Alessio Mengoni, and Renato Fani. "Microbial Genetics and Evolution." Microorganisms 10, no. 7 (2022): 1274. http://dx.doi.org/10.3390/microorganisms10071274.

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Although proto-evolutionary ideas date back to the time of the ancient Greeks, the idea that organisms evolve was not considered a basic element of scientific knowledge until Charles Darwin published his “On the Origin of Species” in 1859 [...]

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6

Iyer, Shankar, and Sonia Muliyil. "Microbial Genetics: Stress Management." Trends in Microbiology 29, no. 1 (2021): 1–3. http://dx.doi.org/10.1016/j.tim.2020.10.015.

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7

Iyer, Shankar, and Sonia Muliyil. "Microbial Genetics: Stress Management." Trends in Genetics 37, no. 1 (2021): 1–3. http://dx.doi.org/10.1016/j.tig.2020.10.012.

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8

Camarinha-Silva, Amelia, Maria Maushammer, Robin Wellmann, Marius Vital, Siegfried Preuss, and Jörn Bennewitz. "Host Genome Influence on Gut Microbial Composition and Microbial Prediction of Complex Traits in Pigs." Genetics 206, no. 3 (2017): 1637–44. http://dx.doi.org/10.1534/genetics.117.200782.

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9

Baldo, Laura, and John H. Werren. "Evolutionary Genetics of Microbial Symbiosis." Genes 12, no. 3 (2021): 327. http://dx.doi.org/10.3390/genes12030327.

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10

Krishnamurthy, Partha. "Modern Microbial Genetics, 2nd Edition." Shock 19, no. 1 (2003): 98. http://dx.doi.org/10.1097/00024382-200301000-00020.

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11

HARTL, D. "Population genetics of microbial organisms." Current Opinion in Genetics & Development 2, no. 6 (1992): 937–42. http://dx.doi.org/10.1016/s0959-437x(05)80119-4.

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12

Chudasamaa, Krunal, Dipak vyasb, and Harsh Joshi. "Microbial Approaches to Plastic Waste Management: Enzymes, Genetics, and Biotechnological Advances." International Journal of Research Publication and Reviews 6, no. 5 (2025): 16007–17. https://doi.org/10.55248/gengpi.6.0525.1986.

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13

Day, M. J., P. F. Randerson, and A. J. Wood. "GENMAP—A microbial genetics computer simulation." Journal of Biological Education 19, no. 1 (1985): 67–70. http://dx.doi.org/10.1080/00219266.1985.9654689.

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14

John, Joseph F., and Louis B. Rice. "The Microbial Genetics of Antibiotic Cycling." Infection Control & Hospital Epidemiology 21, S1 (2000): S22—S31. http://dx.doi.org/10.1086/503170.

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AbstractCycling of currently available antibiotics to reduce resistance is an attractive concept. For cycling strategies to be successful, their implementation must have a demonstrable impact on the prevalence of resistance determinants already dispersed throughout the hospital and associated healthcare facilities. While antibiotic use in hospitals clearly constitutes a stimulus for the emergence of resistance, it is by no means the only important factor. The incorporation of resistance determinants into potentially stable genetic structures, including bacteriophages, plasmids, transposons, an

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15

Jeffries, Thomas W. "Biochemistry and genetics of microbial xylanases." Current Opinion in Biotechnology 7, no. 3 (1996): 337–42. http://dx.doi.org/10.1016/s0958-1669(96)80041-3.

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16

Foster, Kevin R., Katie Parkinson, and Christopher R. L. Thompson. "What can microbial genetics teach sociobiology?" Trends in Genetics 23, no. 2 (2007): 74–80. http://dx.doi.org/10.1016/j.tig.2006.12.003.

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17

Lin, Jie, Michael Manhart, and Ariel Amir. "Evolution of Microbial Growth Traits Under Serial Dilution." Genetics 215, no. 3 (2020): 767–77. http://dx.doi.org/10.1534/genetics.120.303149.

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Selection of mutants in a microbial population depends on multiple cellular traits. In serial-dilution evolution experiments, three key traits are the lag time when transitioning from starvation to growth, the exponential growth rate, and the yield (number of cells per unit resource). Here, we investigate how these traits evolve in laboratory evolution experiments using a minimal model of population dynamics, where the only interaction between cells is competition for a single limiting resource. We find that the fixation probability of a beneficial mutation depends on a linear combination of i

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18

Ramadas, Rohini, and Mukund Thattai. "Flipping DNA to Generate and Regulate Microbial Consortia." Genetics 184, no. 1 (2009): 285–93. http://dx.doi.org/10.1534/genetics.109.105999.

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19

van Belkum, Alex, Marc Struelens, Arjan de Visser, Henri Verbrugh, and Michel Tibayrenc. "Role of Genomic Typing in Taxonomy, Evolutionary Genetics, and Microbial Epidemiology." Clinical Microbiology Reviews 14, no. 3 (2001): 547–60. http://dx.doi.org/10.1128/cmr.14.3.547-560.2001.

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SUMMARY Currently, genetic typing of microorganisms is widely used in several major fields of microbiological research. Taxonomy, research aimed at elucidation of evolutionary dynamics or phylogenetic relationships, population genetics of microorganisms, and microbial epidemiology all rely on genetic typing data for discrimination between genotypes. Apart from being an essential component of these fundamental sciences, microbial typing clearly affects several areas of applied microbiogical research. The epidemiological investigation of outbreaks of infectious diseases and the measurement of ge

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20

Singh, Baljeet, Avnika Garg, Nandini Nayyar, and Alka Sharma. "Genetics And Periodontium: A Review." Dental Journal of Advance Studies 01, no. 02 (2013): 067–72. http://dx.doi.org/10.1055/s-0038-1671956.

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AbstractPeriodontal disease may be regarded as a range of different diseases for which certain individuals are at relatively high risk. Epidemiological and molecular studies of the oral microbial flora suggest, that although microbial factors are required for periodontal disease, they alone do not predict the presence or severity of periodontitis. So in high-risk patient groups, host factors appear to play an important role in susceptibility to periodontitis. In recent years elements of host susceptibility, such as immune response and systemic disease state, and other non-microbial environment

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21

Piggot, Patrick J. "Microbial development." Trends in Genetics 1 (January 1985): 265. http://dx.doi.org/10.1016/0168-9525(85)90098-8.

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22

Gratia, Jean-Pierre. "André Gratia: A Forerunner in Microbial and Viral Genetics." Genetics 156, no. 2 (2000): 471–76. http://dx.doi.org/10.1093/genetics/156.2.471.

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23

Davey, Mary Ellen, and George A. O'toole. "Microbial Biofilms: from Ecology to Molecular Genetics." Microbiology and Molecular Biology Reviews 64, no. 4 (2000): 847–67. http://dx.doi.org/10.1128/mmbr.64.4.847-867.2000.

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SUMMARY Biofilms are complex communities of microorganisms attached to surfaces or associated with interfaces. Despite the focus of modern microbiology research on pure culture, planktonic (free-swimming) bacteria, it is now widely recognized that most bacteria found in natural, clinical, and industrial settings persist in association with surfaces. Furthermore, these microbial communities are often composed of multiple species that interact with each other and their environment. The determination of biofilm architecture, particularly the spatial arrangement of microcolonies (clusters of cells

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24

Gilbert, Rosalind, and Diane Ouwerkerk. "The Genetics of Rumen Phage Populations." Proceedings 36, no. 1 (2020): 165. http://dx.doi.org/10.3390/proceedings2019036165.

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The microbial populations of the rumen are widely recognised as being essential for ruminant nutrition and health, utilising and breaking down fibrous plant material which would otherwise be indigestible. The dense and highly diverse viral populations which co-exist with these microbial populations are less understood, despite their potential impacts on microbial lysis and gene transfer. In recent years, studies using metagenomics, metatranscriptomics and proteomics have provided new insights into the types of viruses present in the rumen and the proteins they produce. These studies however ar

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25

Haruta, Shin, and Kyosuke Yamamoto. "Model Microbial Consortia as Tools for Understanding Complex Microbial Communities." Current Genomics 19, no. 8 (2018): 723–33. http://dx.doi.org/10.2174/1389202919666180911131206.

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26

Kassen, Rees, and Paul B. Rainey. "The Ecology and Genetics of Microbial Diversity." Annual Review of Microbiology 58, no. 1 (2004): 207–31. http://dx.doi.org/10.1146/annurev.micro.58.030603.123654.

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27

Dudaniec, Rachael Y., and Sylvie V. M. Tesson. "Applying landscape genetics to the microbial world." Molecular Ecology 25, no. 14 (2016): 3266–75. http://dx.doi.org/10.1111/mec.13691.

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28

Holloway, B. W. "The less travelled road in microbial genetics." Microbiology 144, no. 12 (1998): 3243–48. http://dx.doi.org/10.1099/00221287-144-12-3243.

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29

Li, Wei. "Linking host genetics to gut microbial variation." Nature Genetics 56, no. 2 (2024): 194. http://dx.doi.org/10.1038/s41588-024-01672-3.

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30

Bubier, Jason A., Elissa J. Chesler, and George M. Weinstock. "Host genetic control of gut microbiome composition." Mammalian Genome 32, no. 4 (2021): 263–81. http://dx.doi.org/10.1007/s00335-021-09884-2.

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AbstractThe gut microbiome plays a significant role in health and disease, and there is mounting evidence indicating that the microbial composition is regulated in part by host genetics. Heritability estimates for microbial abundance in mice and humans range from (0.05–0.45), indicating that 5–45% of inter-individual variation can be explained by genetics. Through twin studies, genetic association studies, systems genetics, and genome-wide association studies (GWAS), hundreds of specific host genetic loci have been shown to associate with the abundance of discrete gut microbes. Using genetical

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31

Xu, Zeling, Shuzhen Chen, Weiyan Wu, Yongqi Wen, and Huiluo Cao. "Type I CRISPR-Cas-mediated microbial gene editing and regulation." AIMS Microbiology 9, no. 4 (2023): 780–800. http://dx.doi.org/10.3934/microbiol.2023040.

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<abstract> <p>There are six major types of CRISPR-Cas systems that provide adaptive immunity in bacteria and archaea against invasive genetic elements. The discovery of CRISPR-Cas systems has revolutionized the field of genetics in many organisms. In the past few years, exploitations of the most abundant class 1 type I CRISPR-Cas systems have revealed their great potential and distinct advantages to achieve gene editing and regulation in diverse microorganisms in spite of their complicated structures. The widespread and diversified type I CRISPR-Cas systems are becoming increasingl

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32

Radford, Alan, and R. H. Davis. "John R. S. Fincham (1926–2005): A Life in Microbial Genetics." Genetics 171, no. 1 (2005): 1–5. http://dx.doi.org/10.1093/genetics/171.1.1.

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33

Handel, Andreas, and Matthew R. Bennett. "Surviving the Bottleneck: Transmission Mutants and the Evolution of Microbial Populations." Genetics 180, no. 4 (2008): 2193–200. http://dx.doi.org/10.1534/genetics.108.093013.

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34

Tabrett, Alexandra, and Matthew W. Horton. "The influence of host genetics on the microbiome." F1000Research 9 (February 5, 2020): 84. http://dx.doi.org/10.12688/f1000research.20835.1.

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It is well understood that genetic differences among hosts contribute to variation in pathogen susceptibility and the ability to associate with symbionts. However, it remains unclear just how influential host genes are in shaping the overall microbiome. Studies of both animal and plant microbial communities indicate that host genes impact species richness and the abundances of individual taxa. Analyses of beta diversity (that is, overall similarity), on the other hand, often conclude that hosts play a minor role in shaping microbial communities. In this review, we discuss recent attempts to id

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35

Lee, Jongan, Yong-Jun Kang, Yoo-Kyung Kim, Jae-Young Choi, Sang-Min Shin, and Moon-Cheol Shin. "Exploring the Influence of Growth-Associated Host Genetics on the Initial Gut Microbiota in Horses." Genes 14, no. 7 (2023): 1354. http://dx.doi.org/10.3390/genes14071354.

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The influences of diet and environmental factors on gut microbial profiles have been widely acknowledged; however, the specific roles of host genetics remain uncertain. To unravel host genetic effects, we raised 47 Jeju crossbred (Jeju × Thoroughbred) foals that exhibited higher genetic diversity. Foals were raised under identical environmental conditions and diets. Microbial composition revealed that Firmicutes, Bacteroidetes, and Spirochaetes were the predominant phyla. We identified 31 host–microbiome associations by utilizing 47,668 single nucleotide polymorphisms (SNPs) and 734 taxa with

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36

Holliday, Robin, and Richard B. Flavell. "John Robert Stanley Fincham. 11 August 1926 — 9 February 2005." Biographical Memoirs of Fellows of the Royal Society 52 (January 2006): 83–95. http://dx.doi.org/10.1098/rsbm.2006.0007.

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Professor John Fincham was one of the UK's leading geneticists, with a remarkably broad knowledge of the subject across all the biological kingdoms. He became an international leader through being at the forefront of microbial genetics as some of the founding principles of the relationships between gene structure, activity and enzyme functions were being uncovered. He spearheaded discoveries from the one gene–one enzyme concept, through genetic complementation, protein structure and recombination. Much of his experimental microbial research centred on the genetic and enzyme variants of glutama

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37

Thompson, Cristiane C., Luciane Chimetto, Robert A. Edwards, Jean Swings, Erko Stackebrandt, and Fabiano L. Thompson. "Microbial genomic taxonomy." BMC Genomics 14, no. 1 (2013): 913. http://dx.doi.org/10.1186/1471-2164-14-913.

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38

Logares, Ramiro. "Population genetics: the next stop for microbial ecologists?" Open Life Sciences 6, no. 6 (2011): 887–92. http://dx.doi.org/10.2478/s11535-011-0086-9.

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AbstractMicrobes play key roles in the functioning of the biosphere. Still, our knowledge about their total diversity is very limited. In particular, we lack a clear understanding of the evolutionary dynamics occurring within their populations (i.e. among members of the same biological species). Unlike animals and plants, microbes normally have huge population sizes, high reproductive rates and the potential for unrestricted dispersal. As a consequence, the knowledge of population genetics acquired from studying animals and plants cannot be applied without extensive testing to microbes. Next g

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39

Szczotka-Flynn, Loretta. "Contact Lens–Related Microbial Keratitis and Host Genetics." Eye & Contact Lens: Science & Clinical Practice 46, no. 6 (2020): 327–28. http://dx.doi.org/10.1097/icl.0000000000000735.

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40

El Kafsi, Hela, Guy Gorochov, and Martin Larsen. "Host genetics affect microbial ecosystems via host immunity." Current Opinion in Allergy and Clinical Immunology 16, no. 5 (2016): 413–20. http://dx.doi.org/10.1097/aci.0000000000000302.

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41

McClay, J. L., and E. J. C. G. van den Oord. "Microbial genetics: Split genes uncovered through science fusion." Heredity 95, no. 1 (2005): 1–2. http://dx.doi.org/10.1038/sj.hdy.6800682.

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42

Miller, Kristin I., Shane D. Ingrey, Alfonsus Alvin, Man Yuen Daniel Sze, Basil D. Roufogalis, and Brett A. Neilan. "Endophytes and the microbial genetics of traditional medicines." Microbiology Australia 31, no. 2 (2010): 60. http://dx.doi.org/10.1071/ma10060.

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Traditional medicine continues to play an essential role in the healthcare systems of many cultures. In some Asian and African countries up to 80% of the population depend on these ancient and culturally based medicinal practices for their primary healthcare needs. Plants and their derived natural products are frequently employed as traditional medicine and such plants are viewed as attractive targets for the discovery of novel therapeutic agents in natural product investigations. A variety of useful drugs has been discovered following the investigation of traditional herbs, such as morphine (

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43

Ebbole, Daniel. "Neurospora: a new (?) model system for microbial genetics." Trends in Genetics 16, no. 7 (2000): 291–92. http://dx.doi.org/10.1016/s0168-9525(00)02040-0.

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44

OALEARY, N., K. OACONNOR, and A. DOBSON. "Biochemistry, genetics and physiology of microbial styrene degradation." FEMS Microbiology Reviews 26, no. 4 (2002): 403–17. http://dx.doi.org/10.1016/s0168-6445(02)00126-2.

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45

O'Leary, Niall D., Kevin E. O'Connor, and Alan D. W. Dobson. "Biochemistry, genetics and physiology of microbial styrene degradation." FEMS Microbiology Reviews 26, no. 4 (2002): 403–17. http://dx.doi.org/10.1111/j.1574-6976.2002.tb00622.x.

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46

Rosenzweig, R. F., R. R. Sharp, D. S. Treves, and J. Adams. "Microbial evolution in a simple unstructured environment: genetic differentiation in Escherichia coli." Genetics 137, no. 4 (1994): 903–17. http://dx.doi.org/10.1093/genetics/137.4.903.

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Abstract Populations of Escherichia coli initiated with a single clone and maintained for long periods in glucose-limited continuous culture, become polymorphic. In one population, three clones were isolated and by means of reconstruction experiments were shown to be maintained in stable polymorphism, although they exhibited substantial differences in maximum specific growth rates and in glucose uptake kinetics. Analysis of these three clones revealed that their stable coexistence could be explained by differential patterns of the secretion and uptake of two alternative metabolites acetate and

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47

Martin, Scott A., and David J. Nisbet. "Effect of Direct-Fed Microbials on Rumen Microbial Fermentation." Journal of Dairy Science 75, no. 6 (1992): 1736–44. http://dx.doi.org/10.3168/jds.s0022-0302(92)77932-6.

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48

Davidsen, Tanja, Erin Beck, Anuradha Ganapathy, et al. "The comprehensive microbial resource." Nucleic Acids Research 38, suppl_1 (2009): D340—D345. http://dx.doi.org/10.1093/nar/gkp912.

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49

Cockell, Charles S. "Microbial rights?" EMBO reports 12, no. 3 (2011): 181. http://dx.doi.org/10.1038/embor.2011.13.

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50

Orlova, Ekaterina, Tom Dudding, Jonathan M. Chernus, et al. "Association of Early Childhood Caries with Bitter Taste Receptors: A Meta-Analysis of Genome-Wide Association Studies and Transcriptome-Wide Association Study." Genes 14, no. 1 (2022): 59. http://dx.doi.org/10.3390/genes14010059.

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Although genetics affects early childhood caries (ECC) risk, few studies have focused on finding its specific genetic determinants. Here, we performed genome-wide association studies (GWAS) in five cohorts of children (aged up to 5 years, total N = 2974, cohorts: Center for Oral Health Research in Appalachia cohorts one and two [COHRA1, COHRA2], Iowa Fluoride Study, Iowa Head Start, Avon Longitudinal Study of Parents and Children [ALSPAC]) aiming to identify genes with potential roles in ECC biology. We meta-analyzed the GWASs testing ~3.9 million genetic variants and found suggestive evidence

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