Relevant bibliographies by topics / Mini-barcodes

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Academic literature on the topic 'Mini-barcodes'

Author: Grafiati
Published: 3 June 2025
Last updated: 31 July 2025

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Journal articles on the topic "Mini-barcodes"

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Yeo, Darren, Amrita Srivathsan, and Rudolf Meier. "Longer is Not Always Better: Optimizing Barcode Length for Large-Scale Species Discovery and Identification." Systematic Biology 69, no. 5 (2020): 999–1015. http://dx.doi.org/10.1093/sysbio/syaa014.

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Abstract New techniques for the species-level sorting of millions of specimens are needed in order to accelerate species discovery, determine how many species live on earth, and develop efficient biomonitoring techniques. These sorting methods should be reliable, scalable, and cost-effective, as well as being largely insensitive to low-quality genomic DNA, given that this is usually all that can be obtained from museum specimens. Mini-barcodes seem to satisfy these criteria, but it is unclear how well they perform for species-level sorting when compared with full-length barcodes. This is here
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Xie, Xuena, Haoting Ye, Xuan Cai, et al. "DNA Mini-Barcodes, a Potential Weapon for Conservation and Combating Illegal Trade of Pangolin." Tropical Conservation Science 14 (January 2021): 194008292110173. http://dx.doi.org/10.1177/19400829211017361.

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Background Smuggling and illegal trade of pangolins and their scales has drastically reduced the wild population of pangolins. Accurate species identification is currently in urgent need as a powerful weapon for combating pangolin smuggling and trade and conserving the already endangered pangolin species. Aim of the study To develop an efficient method based on DNA mini-barcodes for accurate pangolin species identification and authentication of processed pangolin scales against the non-target species. Materials and methods The primers for amplifying the DNA mini-barcodes were designed based on
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Goodman, Aaron M., Lorenzo Prendini, and Lauren A. Esposito. "Systematics of the Arboreal Neotropical ‘thorellii’ Clade of Centruroides Bark Scorpions (Buthidae) and the Efficacy of Mini-Barcodes for Museum Specimens." Diversity 13, no. 9 (2021): 441. http://dx.doi.org/10.3390/d13090441.

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Fragmented and degraded DNA is pervasive among museum specimens, hindering molecular phylogenetics and species identification. Mini-barcodes, 200–300-base-pair (bp) fragments of barcoding genes, have proven effective for species-level identification of specimens from which complete barcodes cannot be obtained in many groups, but have yet to be tested in arachnids. The present study investigated the efficacy of mini-barcodes combined with longer sequences of the Cytochrome c Oxidase Subunit I (COI) gene in the systematics of the arboreal Neotropical ‘thorellii’ clade of Centruroides Marx, 1890
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Su'udi, Mukhamad, Zakiyah Ramadany, Siti Rohimah, Asyifa Yasmin Arum, Dwi Setyati, and Fuad Bahrul Ulum. "Peran Mini-Barcode Internal Transcribed Spacer 2 (ITS2) untuk Identifikasi Molekuler Spesies Anggrek." Indonesian Journal of Biotechnology and Biodiversity 7, no. 1 (2023): 34–45. http://dx.doi.org/10.47007/ijobb.v7i1.166.

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AbstractMolecular identification using short orthological DNA sequences (DNA barcoding) has been applied for the classification of orchid species which is a major step in biodiversity management, conservation, breeding, authenticating components of herbal products, and tracking the adulteration of orchid species. One of the most widely used loci for phylogenetic inference at the generic and infrageneric levels in plants was ITS located between 18S rDNA, 5.8S rDNA, and 26S rDNA. The ITS or ITS2 region has been suggested as a plant barcode in some previous studies. However, DNA barcoding using t
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Abdullah, Asadatun, Mala Nurilmala, and Kinanti Permata Sitaresmi. "DNA Mini-Barcodes as A Molecular Marker for Various Hairtail Fish Products Traceability." Jurnal Pengolahan Hasil Perikanan Indonesia 22, no. 1 (2019): 33. http://dx.doi.org/10.17844/jphpi.v22i1.25874.

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Hairtail fishery is an important fishery commodity with high economic value as export commodity. Authentication based on DNA mini-barcodes can be applied to overcome seafood fraud and to support Indonesian traceability system. This study was aimed to design species-specific primers of DNA minibarcodes and authentication of various processed hairtail fish products such as smoked, baked, fried, canned, and boiled. Analytical method applied PCR-based of cytochrome c oxidase 1 (COI) full length and<br />mini-barcodes. Mini-barcode primer specific for hairtail (Trichiurus lepturus) successful
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VAN HOUDT, J. K. J., F. C. BREMAN, M. VIRGILIO, and M. DE MEYER. "Recovering full DNA barcodes from natural history collections of Tephritid fruitflies (Tephritidae, Diptera) using mini barcodes." Molecular Ecology Resources 10, no. 3 (2010): 459–65. http://dx.doi.org/10.1111/j.1755-0998.2009.02800.x.

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Abdullah, Asadatun, Mala Nurilmala, Aulia Sekar Sari, and Agoes Mardiono Jacoeb. "MINI-COI BARCODES SEBAGAI PENANDA MOLEKULER UNTUK KETERTELUSURAN LABEL PANGAN BERBAGAI PRODUK OLAHAN IKAN SIDAT." Jurnal Pengolahan Hasil Perikanan Indonesia 21, no. 2 (2018): 377. http://dx.doi.org/10.17844/jphpi.v21i2.23507.

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Ikan Sidat merupakan komoditas hasil perikanan penting dengan nilai ekonomis tinggi. DNA barcoding telah cukup banyak digunakan sebagai metode berbasis penentuan urutan nukelotida untuk mendeteksi jenis spesies pada ikan. Proses pengolahan dengan suhu tinggi dapat menyulitkan proses identifikasi berbasis penentuan urutan nukelotida. Tujuan penelitian ini adalah untuk mengidentifikasi spesies berbagai produk olahan ikan sidat menggunakan marka molekuler <em>mini-COI barcodes.</em> Pengolahan suhu tinggi yang digunakan pada penelitian ini adalah: panggang, penggorengan dalam minyak s
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Boza, Beatriz R., Vanessa P. Cruz, Gustavo Stabile, Matheus M. Rotundo, Fausto Foresti, and Claudio Oliveira. "Mini DNA barcodes reveal the details of the foraging ecology of the largehead hairtail, Trichiurus lepturus (Scombriformes: Trichiuridae), from São Paulo, Brazil." Neotropical Ichthyology 20, no. 2 (2022): 1–11. https://doi.org/10.1590/1982-0224-2021-0166.

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Boza, Beatriz R., Cruz, Vanessa P., Stabile, Gustavo, Rotundo, Matheus M., Foresti, Fausto, Oliveira, Claudio (2022): Mini DNA barcodes reveal the details of the foraging ecology of the largehead hairtail, Trichiurus lepturus (Scombriformes: Trichiuridae), from São Paulo, Brazil. Neotropical Ichthyology (e210166) 20 (2): 1-11, DOI: 10.1590/1982-0224-2021-0166, URL: http://dx.doi.org/10.1590/1982-0224-2021-0166
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Chen, Mingyang, Xuan Han, Jiao Ma, et al. "Identification of Plastrum Testudinis used in traditional medicine with DNA mini-barcodes." Revista Brasileira de Farmacognosia 28, no. 3 (2018): 267–72. http://dx.doi.org/10.1016/j.bjp.2018.04.008.

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Abdullah, Asadatun, Ari Elisa Ratih, Shabrina Aulia, Puji Rianti, Tati Nurhayati, and Agoes Mardiono Jacoeb. "Autentikasi Produk Olahan Ikan Hiu Komersial menggunakan Teknik Species-Specific DNA Mini-barcodes." Jurnal Pengolahan Hasil Perikanan Indonesia 23, no. 2 (2020): 383–91. http://dx.doi.org/10.17844/jphpi.v23i2.32226.

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Pemanfaatan ikan hiu sebagai bahan baku produk olahan perikanan dapat menyebabkan berkurangnya populasi ikan hiu yang juga rentan akan kepunahan. Ikan hiu pada umumnya diperdagangkan dalam bentuk sirip, daging ikan yang diasinkan dan direbus, minyak ikan serta sebagai bahan subtitusi pada pakan hewan sehingga proses identifikasi menggunakan metode berbasis morfologi dan meristik sulit dilakukan. Sebagai alternatif proses autentikasi bahan baku produk olahan ikan hiu adalah menggunakan teknik DNA mini barcodes. Penelitian ini bertujuan untuk merancang dan mengaplikasikan primer DNA mini barcode
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Book chapters on the topic "Mini-barcodes"

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Hajibabaei, Mehrdad, and Charly McKenna. "DNA Mini-barcodes." In DNA Barcodes. Humana Press, 2012. http://dx.doi.org/10.1007/978-1-61779-591-6_15.

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Conference papers on the topic "Mini-barcodes"

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Karim, Mohimenul, and Rashid Abid. "Efficacy and accuracy responses of DNA mini-barcodes in species identification under a supervised machine learning approach." In 2021 IEEE Conference on Computational Intelligence in Bioinformatics and Computational Biology (CIBCB). IEEE, 2021. http://dx.doi.org/10.1109/cibcb49929.2021.9562838.

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