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Books on the topic 'Molecular taxonomy'

Author: Grafiati
Published: 4 June 2021
Last updated: 11 September 2023

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1

Besse, Pascale, ed. Molecular Plant Taxonomy. Totowa, NJ: Humana Press, 2014. http://dx.doi.org/10.1007/978-1-62703-767-9.

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Besse, Pascale, ed. Molecular Plant Taxonomy. New York, NY: Springer US, 2021. http://dx.doi.org/10.1007/978-1-0716-0997-2.

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3

Hewitt, Godfrey M., Andrew W. B. Johnston, and J. Peter W. Young, eds. Molecular Techniques in Taxonomy. Berlin, Heidelberg: Springer Berlin Heidelberg, 1991. http://dx.doi.org/10.1007/978-3-642-83962-7.

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4

NATO Advanced Study Institute on Molecular Techniques in Taxonomy (1990 Norwich, England). Molecular techniques in taxonomy. Berlin: Springer-Verlag, 1991.

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5

Sneh, Baruch, Suha Jabaji-Hare, Stephen Neate, and Gerda Dijst, eds. Rhizoctonia Species: Taxonomy, Molecular Biology, Ecology, Pathology and Disease Control. Dordrecht: Springer Netherlands, 1996. http://dx.doi.org/10.1007/978-94-017-2901-7.

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6

Dietzgen, Ralf Georg, and Ivan V. Kuzmin. Rhabdoviruses: Molecular taxonomy, evolution, genomics, ecology, host-vector interactions, cytopathology, and control. Norfolk, UK: Caister Academic Press, 2012.

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7

J, Towner K., Bergogne-Bérézin E, Fewson C. A, Federation of European Microbiological Societies., and International Workshop on Acinetobacter (2nd : 1990 : Paris, France), eds. The Biology of acinetobacter: Taxonomy, clinical importance, molecular, biology, physiology, industrial relevance. New York: Plenum Press, 1991.

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8

Hood, Derek W. The application of molecular biology techniques to the taxonomy of the pink pigmented facultative methylotrophs. [s.l.]: typescript, 1985.

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9

Ōsawa, Syōzō. Molecular phylogeny and evolution of carabid ground beetles. New York: Springer, 2003.

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10

Antunes Carvalho, Fernanda. Molecular Phylogeny, Biogeography and an e-Monograph of the Papaya Family (Caricaceae) as an Example of Taxonomy in the Electronic Age. Wiesbaden: Springer Fachmedien Wiesbaden, 2015. http://dx.doi.org/10.1007/978-3-658-10267-8.

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11

Crawford, Daniel J. Plant molecular systematics: Macromolecular approaches. New York: Wiley, 1990.

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12

Mace, Emma Sian. Molecular, taxonomic and information technology studies in the Solanaceae. Birmingham: University of Birmingham, 1998.

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13

Andriantompohavana, Rambinintsoa. Molecular phylogeny and taxonomic revision of the woolly lemurs, genus Avahi (Primates : Lemuriformes) / Rambinintsoa Andriantompohavana, ... [et al.]. Lubbock, TX: Museum of Texas Tech University, 2007.

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Andriantompohavana, Rambinintsoa. Molecular phylogeny and taxonomic revision of the woolly lemurs, genus Avahi (Primates : Lemuriformes) / Rambinintsoa Andriantompohavana, ... [et al.]. Lubbock, TX: Museum of Texas Tech University, 2007.

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15

Corti, Claudia, Pietro Lo Cascio, and Marta Biaggini, eds. Mainland and insular lacertid lizards. Florence: Firenze University Press, 2007. http://dx.doi.org/10.36253/978-88-8453-523-8.

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Lacertid lizards have long been a fruitful field of scientific enquiry with many people working on them over the past couple of hundred years. The scope of the field has steadily increased, beginning with taxonomy and anatomy and gradually spreading so that it includes such topics as phylogenetics, behaviour, ecology, and conservation. Since 1992, a series of symposia on lacertid lizards of the Mediterranean basin have taken place every three years. The present volume stems from the 2004 meeting in the Aeolian Islands. In the volume a wide range of island topics are considered, including the systematics of the species concerned, from both morphological and molecular viewpoints, interaction with other taxa, and conservation. The last topic is especially important, as island lizards across the world have often been vulnerable to extinction, after they came into contact with people and the animals they introduced. The volume also has papers on the more positive aspects of human influence, specifically the benign effects of traditional agriculture on at least some reptile species. Olive trees, cork oaks and the banks and walls of loose rocks that crisscross the Mediterranean scene all often contribute to elevated lizard populations. Nor is more basic biology neglected and there are articles on morphology, reproduction, development and thermoregulation. Finally, it is good to see one paper on non-Mediterranean species is included. For, to fully understand the lacertids of this region, it is necessary to appreciate their close relatives in Africa, Asia and the archipelagos of the northeastern Atlantic Ocean. (From Preface by E. Nicholas Arnold & Wolfgang Böhme)
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16

Bo, Fernholm, Bremer Kåre, Jörnvall Hans, and Nobelstiftelsen, eds. The hierarchy of life: Molecules and morphology in phylogenetic analysis : proceedings from Nobel Symposium 70 held at Alfred Nobel's Björkborn, Karlskoga, Sweden, August 29-September 2, 1988. Amsterdam: Excerpta Medica, 1989.

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17

Hewitt, Godfrey M. Molecular Techniques in Taxonomy ). Springer, 2011.

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18

Johnston, Andrew W. B., Godfrey M. Hewitt, and J. Peter W. Young. Molecular Techniques in Taxonomy. Springer London, Limited, 2013.

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19

Molecular Plant Taxonomy Methods in Molecular Biology. Humana Press Inc., 2014.

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20

Haq, Imran Ul. Fungal Molecular Taxonomy: A laboratory manual. EScience Press, 2018. http://dx.doi.org/10.33804/978.969.7850.00.6.

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21

Besse, Pascale. Molecular Plant Taxonomy: Methods and Protocols. Springer, 2020.

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22

Besse, Pascale. Molecular Plant Taxonomy: Methods and Protocols. Humana Press, 2016.

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23

Besse, Pascale. Molecular Plant Taxonomy: Methods and Protocols. Springer, 2021.

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24

Sneh, B., S. Jabaji-Hare, S. M. Neate, and G. Dijst. Rhizoctonia Species : Taxonomy, Molecular Biology, Ecology, Pathology and Disease Control: Taxonomy, Molecular Biology, Ecology, Pathology and Disease Control. Springer, 2010.

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25

Rhizoctonia species: Taxonomy, molecular biology, ecology, pathology, and disease control. Dordrecht: Kluwer Academic, 1996.

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26

(Editor), B. Sneh, S. Jabaji-Hare (Editor), S. M. Neate (Editor), and G. Dijst (Editor), eds. Rhizoctonia Species: Taxonomy, Molecular Biology, Ecology, Pathology and Disease Control. Springer, 1996.

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27

Sneh, B., S. Jabaji-Hare, S. M. Neate, and G. Dijst. Rhizoctonia Species: Taxonomy, Molecular Biology, Ecology, Pathology and Disease Control. Springer London, Limited, 2013.

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28

Borman, Andrew M. Fungal taxonomy and nomenclature. Edited by Christopher C. Kibbler, Richard Barton, Neil A. R. Gow, Susan Howell, Donna M. MacCallum, and Rohini J. Manuel. Oxford University Press, 2017. http://dx.doi.org/10.1093/med/9780198755388.003.0002.

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This chapter summarizes historical and modern approaches to fungal taxonomy, the current taxonomic standing of medically important fungi, and the implications for fungal nomenclature following the recent Amsterdam Declaration on Fungal Nomenclature, which prohibits dual nomenclature. Fungi comprise an entire kingdom, containing an estimated 1–10 million species. Traditionally, fungal identification was based on examination of morphological and phenotypic features, including the type of sexual spores they form, and method of formation, and structural features of their asexual spores. Thus, many fungi have been described and named independently several times based on either their sexual or asexual stages, resulting in a single genetic entity having multiple names. Recent molecular approaches to fungal identification have led to profound changes in fungal nomenclature and taxonomy. Certain phyla have now been disbanded, cryptic species have been identified via molecular approaches, and long-recognized species have been transferred to new genera based on genotypic comparisons.
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29

Towner, K. J., E. Bergogne-Bérézin, and C. A. Fewson. Biology of Acinetobacter: Taxonomy, Clinical Importance, Molecular Biology, Physiology, Industrial Relevance. Springer, 2013.

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30

Towner, K. J., E. Bergogne-Bérézin, and C. A. Fewson. Biology of Acinetobacter: Taxonomy, Clinical Importance, Molecular Biology, Physiology, Industrial Relevance. Springer, 2014.

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31

Lactic Acid Bacteria Biodiversity and Taxonomy. Wiley-Blackwell, 2013.

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32

(Editor), K. J. Towner, E. Bergogne-Bérézin (Editor), and C. A. Fewson (Editor), eds. The Biology of Acinetobacter: Taxonomy, Clinical Importance, Molecular Biology, Physiology, Industrial Relevance (F.E.M.S. Symposium Series). Springer, 1991.

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33

Molecular taxonomy and biological control: Root weevil pests (coleoptera: Otiorhynchinae) and entomopathogenic nematodes (Steinernematidae and Heterorhabditidae). Ottawa: National Library of Canada, 1994.

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34

The Macaronesian Laparocerus (Coleoptera, Curculionidae, Entiminae): Taxonomy, phylogeny, and natural history. Santa Cruz de Tenerife: Publicaciones Turquesa, 2022.

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35

Osawa, S., Z. H. Su, and Y. Imura. Molecular Phylogeny and Evolution of Carabid Ground Beetles. Springer, 2004.

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36

Osawa, S., Y. Imura, and Z. H. Su. Molecular Phylogeny and Evolution of Carabid Ground Beetles. Springer London, Limited, 2011.

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37

Osawa, S. Molecular Phylogeny and Evolution of Carabid Ground Beetles. Springer, 2012.

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38

Molecular Phylogeny and Evolution of Carabid Ground Beetles. Springer, 2011.

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39

Carvalho, Fernanda Antunes Antunes. Molecular Phylogeny, Biogeography and an e-Monograph of the Papaya Family as an Example of Taxonomy in the Electronic Age. Springer Spektrum, 2015.

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40

Carvalho, Fernanda Antunes. Molecular Phylogeny, Biogeography and an e-Monograph of the Papaya Family (Caricaceae) As an Example of Taxonomy in the Electronic Age. Springer Vieweg. in Springer Fachmedien Wiesbaden GmbH, 2015.

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41

Crawford, Daniel J. Plant molecular systematics. Wiley, 1990.

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42

Ayala, Francisco J., and Camilo J. Cela-Conde. Evolution, genetics, and systematics. Oxford University Press, 2017. http://dx.doi.org/10.1093/oso/9780198739906.003.0001.

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This chapter starts with the general principles of the theory of evolution by natural selection advanced by Darwin and the Mendelian theory of heredity. Next comes consideration of the “new-Darwinian synthesis” or “synthetic theory,” which integrates both precedents into what has become the current paradigm of the life sciences. Molecular evolution and population genetics follow, including epigenetic processes. Next, special models of selection are considered, such as sexual selection and the models that account for altruistic behavior. After the mechanisms of speciation, the main concepts of systematics are explored, which facilitate understanding of different traits. The chapter finally explores the fundamental concepts of taxonomy and the methods from phenetics to cladistics, that makes it possible to evaluate the diversity of organisms and the methods for dating the fossil record.
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43

Barker, Richard. Seven steps to sustainability based on precision medicine. Oxford University Press, 2016. http://dx.doi.org/10.1093/med/9780198737780.003.0005.

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Bioscience is producing tools that can streamline and focus the medical innovation process. Drawing on these tools we can and must make seven specific changes of mindset and practice. These are: (1) basing discovery on a molecular taxonomy of disease within a systems understanding of biology; (2) high impact academic-industry partnerships; (3) adaptive and collaborative product development and approval; (4) more creative reward and financing systems; (5) the engineering of faster adoption and better adherence; (6) real world data-driven learning; (7) bringing patients into the decision-making mainstream. Together they have the potential to transform life science translation, from a new approach to discovery, through faster, more targeted therapy development, to a better use of health data. Together these changes spell a new era of precision medicine.
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44

Brower, Andrew V. Z., and Randall T. Schuh. Biological Systematics. 3rd ed. Cornell University Press, 2021. http://dx.doi.org/10.7591/cornell/9781501752773.001.0001.

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Understanding the history and philosophy of biological systematics (phylogenetics, taxonomy and classification of living things) is key to successful practice of the discipline. In this thoroughly revised third edition, the authors provide an updated account of cladistic principles and techniques, emphasizing their empirical and epistemological clarity. The book covers the history and philosophy of systematics; the mechanics and methods of character analysis, phylogenetic inference, and evaluation of results; the practical application of systematic results to biological classification, adaptation and coevolution, biodiversity, and conservation; along with new chapters on species and molecular clocks. The book is both a textbook for students studying systematic biology and a desk reference for practicing systematists. Part explication of concepts and methods, part exploration of the underlying epistemology of systematics, the edition addresses why some methods are more empirically sound than others.
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45

Rouse, Greg, Fredrik Pleijel, and Ekin Tilic. Annelida. Oxford University Press, 2022. http://dx.doi.org/10.1093/oso/9780199692309.001.0001.

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Annelids (the segmented worms) exist in a remarkably diverse range of mostly marine but also freshwater and terrestrial habitats, varying greatly in size and form. This text provides. This text begins with an introduction to the phylum and an outline of annelid taxonomy. The book describes their collection and the methods to ensure their optimal preservation, and provides an overview of anatomy with its relevant terminology. It includes the latest molecular phylogenomic evidence and is organised based on a new, robust phylogenetic hypothesis. It looks at groups which include Clitellata (comprising more than a third of total annelid diversity), Sipuncula, and Thalassematidae (formerly Echiura). It reflects the enormous amount of research on these organisms that has burgeoned since the millennium, principally due to their use as model organisms to address wider and more general evolutionary and ecological questions.
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46

Koepfli, Klaus-Peter, Jerry W. Dragoo, and Xiaoming Wang. The evolutionary history and molecular systematics of the Musteloidea. Oxford University Press, 2018. http://dx.doi.org/10.1093/oso/9780198759805.003.0002.

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This chapter provides a review of the evolutionary and taxonomic history of the Musteloidea, which is the most species-rich superfamily of the Carnivora, containing approximately 30% of the extant species in the order. An up-to-date summary of knowledge on the evolutionary and taxonomic history and phylogenetic relationships of the Mephitidae, Ailuridae, Procyonidae and Mustelidae is provided. Multilocus DNA sequences have made a large impact on the understanding of phylogenetic relationships among the Musteloidea. Molecular data have revealed distinct families (Ailuridae and Mephitidae) within the Musteloidea and have illuminated new relationships based on tempo and patterns of evolution within the Procyonidae. Morphological data in conjunction with molecular data have been used to elucidate species boundaries within certain musteloid genera and have led to the discovery of a new species. Research studies published during the last 30 years have enriched and transformed our understanding of the evolution of musteloid biodiversity.
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47

Phylogenetic Trees Made Easy: A How-To Manual for Molecular Biologists. Sinauer Associates, 2001.

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48

Fernández, Marta Susana, Francisco Brusa, María Cristina Damborenea, Pablo Matías Dellapé, and Fabiana E. Gallardo. Introducción a la taxonomía. Editorial de la Universidad Nacional de La Plata (EDULP), 2013. http://dx.doi.org/10.35537/10915/33812.

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La Taxonomía, entendida como la teoría y práctica de la clasificación de los seres vivos, da sustento y nutre muchas otras ramas de la Biología. La práctica de esta disciplina, en su forma moderna, se remonta a mediados del siglo XVIII cuando se incorporó el concepto de Systema, para referirse al ordenamiento de los seres vivos, y la nomenclatura binominal de las especies dentro de un sistema jerárquico llevada a cabo por el botánico sueco Carlos Linneo (1753, 1758). La práctica de la Taxonomía comprende tanto la identificación, nominación y descripción de especies (microtaxonomía), como la clasificación de grupos taxonómicos mayores (macrotaxonomía). En nuestros días, esta disciplina enfrenta el desafío de incorporar nuevos métodos y técnicas de manejo y análisis de datos tanto a nivel de la micro como de la macrotaxonomía. Los métodos y técnicas de obtención de datos taxonómicos, su contrastación e interpretación están sometidos a un cambio drástico. Así, la identificación, caracterización, clasificación de las especies, y el análisis de sus relaciones filogenéticas se ven favorecidos y potenciados mediante la adopción de las tecnologías digitales y el uso de la infraestructura cibernética. Este manual propone introducir al alumno de grado de la carrera de Biología en la práctica taxonómica, comenzando por sus prácticas más sencillas y tradicionales, hasta sus prácticas más complejas e integradas; desde el uso y construcción de claves taxonómicas dicotómicas en papel, hasta el uso de claves taxonómicas interactivas disponibles en la web; y desde la construcción manual de redes y árboles filogenéticos, hasta la construcción, búsqueda e interpretaciones de árboles filogenéticos a partir de conjuntos de datos morfológicos y moleculares. La presente contribución consta de 64 ejercitaciones distribuidas en 8 capítulos, e incluye guías para el uso de software y/o bases de datos taxonómicas como material suplementario.
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49

Taberlet, Pierre, Aurélie Bonin, Lucie Zinger, and Eric Coissac. DNA metabarcoding data analysis. Oxford University Press, 2018. http://dx.doi.org/10.1093/oso/9780198767220.003.0008.

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DNA metabarcoding generates huge amounts of data containing noise introduced by molecular methods. Chapter 8 “DNA metabarcoding data analysis” discusses the analytic steps and available software to curate and evaluate DNA metabarcoding data prior to final ecological analyses. It provides command lines to perform primary analyses of Illumina sequencing data with the OBITools, ranging from read assignment to samples to the formation of molecular operational taxonomic units (MOTUs) and their assignment to a taxon through comparison against reference databases. Chapter 8 also develops several methods to further curate sequencing data from contaminants or dysfunctional PCRs by using DNA extraction, PCR, and sequencing blank controls as well as PCR/biological replicates. It also presents several classical analyses to ensure that the diversity of the sample or the study site is appropriately covered. Finally, this chapter considers what conclusions on biodiversity and ecological processes can be really drawn from metabarcoding data.
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50

Carrier, Tyler J., Adam M. Reitzel, and Andreas Heyland, eds. Section 2 Summary—Functional Morphology and Ecology of Larval Forms. Oxford University Press, 2018. http://dx.doi.org/10.1093/oso/9780198786962.003.0010.

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Larvae are intermediate life history stages between embryos and juvenile and/or reproductive stages, but this characteristic is about the only feature that unites the incredible diversity of larval forms. The majority of larval forms evolved in the sea and exhibit tremendous morphological, physiological, and molecular variation, many of which are potential adaptations to match form and function in the context of the aquatic environment. The three chapters in this section review how larvae from different taxonomic groups sort through and ingest exogenous nutrients and how environmental variation elicits morphological variation....
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