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Relevant bibliographies by topics / Monoderm

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Journal articles

Academic literature on the topic 'Monoderm'

Author: Grafiati

Published: 25 May 2024

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Journal articles on the topic "Monoderm"

1

Sheppard, Devon, Jamie-Lee Berry, Rémi Denise, Eduardo P. C. Rocha, Steve Matthews, and Vladimir Pelicic. "The major subunit of widespread competence pili exhibits a novel and conserved type IV pilin fold." Journal of Biological Chemistry 295, no. 19 (2020): 6594–604. http://dx.doi.org/10.1074/jbc.ra120.013316.

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Type IV filaments (T4F), which are helical assemblies of type IV pilins, constitute a superfamily of filamentous nanomachines virtually ubiquitous in prokaryotes that mediate a wide variety of functions. The competence (Com) pilus is a widespread T4F, mediating DNA uptake (the first step in natural transformation) in bacteria with one membrane (monoderms), an important mechanism of horizontal gene transfer. Here, we report the results of genomic, phylogenetic, and structural analyses of ComGC, the major pilin subunit of Com pili. By performing a global comparative analysis, we show that Com pi

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2

Xu, Ling, Dan Naylor, Zhaobin Dong, et al. "Drought delays development of the sorghum root microbiome and enriches for monoderm bacteria." Proceedings of the National Academy of Sciences 115, no. 18 (2018): E4284—E4293. http://dx.doi.org/10.1073/pnas.1717308115.

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Drought stress is a major obstacle to crop productivity, and the severity and frequency of drought are expected to increase in the coming century. Certain root-associated bacteria have been shown to mitigate the negative effects of drought stress on plant growth, and manipulation of the crop microbiome is an emerging strategy for overcoming drought stress in agricultural systems, yet the effect of drought on the development of the root microbiome is poorly understood. Through 16S rRNA amplicon and metatranscriptome sequencing, as well as root metabolomics, we demonstrate that drought delays th

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3

Léonard, Raphaël R., Eric Sauvage, Valérian Lupo, et al. "Was the Last Bacterial Common Ancestor a Monoderm after All?" Genes 13, no. 2 (2022): 376. http://dx.doi.org/10.3390/genes13020376.

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The very nature of the last bacterial common ancestor (LBCA), in particular the characteristics of its cell wall, is a critical issue to understand the evolution of life on earth. Although knowledge of the relationships between bacterial phyla has made progress with the advent of phylogenomics, many questions remain, including on the appearance or disappearance of the outer membrane of diderm bacteria (also called Gram-negative bacteria). The phylogenetic transition between monoderm (Gram-positive bacteria) and diderm bacteria, and the associated peptidoglycan expansion or reduction, requires

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4

Pelicic, Vladimir. "Monoderm bacteria: the new frontier for type IV pilus biology." Molecular Microbiology 112, no. 6 (2019): 1674–83. http://dx.doi.org/10.1111/mmi.14397.

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5

Gupta, Radhey S. "Protein Phylogenies and Signature Sequences: A Reappraisal of Evolutionary Relationships among Archaebacteria, Eubacteria, and Eukaryotes." Microbiology and Molecular Biology Reviews 62, no. 4 (1998): 1435–91. http://dx.doi.org/10.1128/mmbr.62.4.1435-1491.1998.

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SUMMARY The presence of shared conserved insertion or deletions (indels) in protein sequences is a special type of signature sequence that shows considerable promise for phylogenetic inference. An alternative model of microbial evolution based on the use of indels of conserved proteins and the morphological features of prokaryotic organisms is proposed. In this model, extant archaebacteria and gram-positive bacteria, which have a simple, single-layered cell wall structure, are termed monoderm prokaryotes. They are believed to be descended from the most primitive organisms. Evidence from indels

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6

Forster, Brian M., and Hélène Marquis. "Protein transport across the cell wall of monoderm Gram-positive bacteria." Molecular Microbiology 84, no. 3 (2012): 405–13. http://dx.doi.org/10.1111/j.1365-2958.2012.08040.x.

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7

Taib, Najwa, Daniela Megrian, Jerzy Witwinowski, et al. "Genome-wide analysis of the Firmicutes illuminates the diderm/monoderm transition." Nature Ecology & Evolution 4, no. 12 (2020): 1661–72. http://dx.doi.org/10.1038/s41559-020-01299-7.

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8

Luhur, Johana, Helena Chan, Benson Kachappilly, et al. "A dynamic, ring-forming MucB / RseB-like protein influences spore shape in Bacillus subtilis." PLOS Genetics 16, no. 12 (2020): e1009246. http://dx.doi.org/10.1371/journal.pgen.1009246.

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How organisms develop into specific shapes is a central question in biology. The maintenance of bacterial shape is connected to the assembly and remodelling of the cell envelope. In endospore-forming bacteria, the pre-spore compartment (the forespore) undergoes morphological changes that result in a spore of defined shape, with a complex, multi-layered cell envelope. However, the mechanisms that govern spore shape remain poorly understood. Here, using a combination of fluorescence microscopy, quantitative image analysis, molecular genetics and transmission electron microscopy, we show that Ssd

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9

Zámocký, Marcel, Stefan Hofbauer, Thomas Gabler, and Paul G. Furtmüller. "The Molecular Evolution, Structure, and Function of Coproporphyrinogen Oxidase and Protoporphyrinogen Oxidase in Prokaryotes." Biology 12, no. 12 (2023): 1527. http://dx.doi.org/10.3390/biology12121527.

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Coproporphyrinogen oxidase (CgoX) and protoporphyrinogen oxidase (PgoX) catalyze the oxidation of the flexible cyclic tetrapyrrole of porphyrinogen compounds into fully conjugated, planar macrocyclic porphyrin compounds during heme biosynthesis. These enzymes are activated via different pathways. CgoX oxidizes coproporphyrinogen III to coproporphyrin III in the coproporphyrin-dependent pathway, whereas PgoX oxidizes protoporphyrinogen IX to protoporphyrin IX in the penultimate step of the protoporphyrin-dependent pathway. The phylogenetic analysis presented herein demonstrates a clear differen

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10

Renier, Sandra, Pierre Micheau, Régine Talon, Michel Hébraud, and Mickaël Desvaux. "Subcellular Localization of Extracytoplasmic Proteins in Monoderm Bacteria: Rational Secretomics-Based Strategy for Genomic and Proteomic Analyses." PLoS ONE 7, no. 8 (2012): e42982. http://dx.doi.org/10.1371/journal.pone.0042982.

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