Relevant bibliographies by topics / Monopartite Genome

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  2. Dissertations / Theses
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Academic literature on the topic 'Monopartite Genome'

Author: Grafiati
Published: 3 June 2025
Last updated: 31 July 2025

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Journal articles on the topic "Monopartite Genome"

1

Islam, Mohammad Nurul, Aneesa Ansari, and RH Sarker. "Tomato leaf curl Patna virus causing tomato leaf curl disease in Bangladesh." Bangladesh Journal of Botany 48, no. 1 (2019): 153–61. http://dx.doi.org/10.3329/bjb.v48i1.47434.

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Tomato leaf curl virus (ToLCV) has appeared as a potential threat to the tomato production in the world. ToLCV, a member of the family Geminiviridae may contain either bipartite or monopartite genome. The genetic nature of a monopartite ToLCV isolate characterized from the tomato leaf curl diseased samples of Jamalpur district, Bangladesh (ToLCV-JB) has been reported. The products of rolling circle amplification (RCA) were digested, cloned and sequenced. Sequence analysis revealed the features of begomovirus genome organization in the ToLCV-JB isolate, containing six open reading frames. BLAST
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2

Madhu, Pearl R* Gopal Pandi &. Sundara Baalaji Narayanan. "INSILICO DESIGN OF SMALL INTERFERENCE RNA (SIRNA) FOR PREVENTION OF VIRAL (BEGOMOVIRUS) DISEASES IN COMMERCIALLY VALUABLE PLANTS (TOMATO AND PULSES)." INTERNATIONAL JOURNAL OF RESEARCH SCIENCE & MANAGEMENT 4, no. 7 (2017): 61–66. https://doi.org/10.5281/zenodo.831442.

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Yellow vein mosaic or yellow leaf curl disease in tomato, okra and other pulses is transmitted by Bemisia tabaci (White fly), leading to loss of production and quality. Gene silencing is one of the powerful approaches to overcome viral based plant diseases. However it is of great challenge to design potential small interfering RNA (siRNA) molecules against genes responsible for the diseases. From the primary sequence information, using insilico approach, 15 siRNAs were designed for genes involved in pathogenicity like suppressor, movement and nuclear shuttle namely V2, C2 and C4 of monopartite
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3

Beren, Christian, Yanxiang Cui, Antara Chakravarty, et al. "Genome organization and interaction with capsid protein in a multipartite RNA virus." Proceedings of the National Academy of Sciences 117, no. 20 (2020): 10673–80. http://dx.doi.org/10.1073/pnas.1915078117.

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We report the asymmetric reconstruction of the single-stranded RNA (ssRNA) content in one of the three otherwise identical virions of a multipartite RNA virus, brome mosaic virus (BMV). We exploit a sample consisting exclusively of particles with the same RNA content—specifically, RNAs 3 and 4—assembled in planta by agrobacterium-mediated transient expression. We find that the interior of the particle is nearly empty, with most of the RNA genome situated at the capsid shell. However, this density is disordered in the sense that the RNA is not associated with any particular structure but rather
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4

Likhith, R. K., and Anitha Peter. "Development of Infectious Clones of Tomato Leaf Curl Karnataka Virus (ToLCKV) and Study of Pathogenicity on Tomato (Solanum Lycopersicum L.) through Agroinoculation." Journal of Advances in Biology & Biotechnology 27, no. 5 (2024): 581–94. http://dx.doi.org/10.9734/jabb/2024/v27i5821.

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Tomato leaf curl disease (ToLCD) caused by Tomato leaf curl Karnataka virus (ToLCKV) is a serious threat to tomato production. It is a Begomovirus (Geminiviridae) with monopartite single stranded DNA and transmitted by whitefly. In this study, we have amplified the whole genome of ToLCKV by rolling circle amplification (RCA) using the bacteriophage Phi 29 DNA polymerase. The infectious clones (ICs) were generated by monomerising the RCA products by partial digestion using a single restriction enzyme followed by cloning into a single digested binary vector. The resultant recombinant vector was
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5

Kass, Gideon, Gabriel Arad, Joseph Rosenbluh, et al. "Permeabilized mammalian cells as an experimental system for nuclear import of geminiviral karyophilic proteins and of synthetic peptides derived from their nuclear localization signal regions." Journal of General Virology 87, no. 9 (2006): 2709–20. http://dx.doi.org/10.1099/vir.0.82021-0.

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The plant-infecting geminiviruses deliver their genome and viral proteins into the host cell nucleus. Members of the family Geminiviridae possess either a bipartite genome composed of two ∼2.6 kb DNAs or a monopartite genome of ∼3.0 kb DNA. The bipartite genome of Bean dwarf mosaic virus (BDMV) encodes several karyophilic proteins, among them the capsid protein (CP) and BV1 (nuclear shuttle protein). A CP is also encoded by the monopartite genome of Tomato yellow leaf curl virus (TYLCV). Here, an in vitro assay system was used for direct demonstration of nuclear import of BDMV BV1 and TYLCV CP
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6

Ashraf, Muhammad Aleem, Babar Ali, Maryam Fareed, et al. "In Silico Identification of Banana High-Confidence MicroRNA Binding Sites Targeting Banana Streak GF Virus." Applied Microbiology 5, no. 1 (2025): 13. https://doi.org/10.3390/applmicrobiol5010013.

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Banana streak GF virus (BSGFV) is the extremely dangerous monopartite badnavirus (genus, Badnavirus; family, Caulimoviridae) of banana (Musa acuminata AAA Group) that imposes a serious threat to global banana production. The BSGFV causes a devastating pandemic in banana crops, transmitted by deadly insect pest mealybug vectors and replicated through an RNA intermediate. The BSGFV is a reverse-transcribing DNA virus that has a monopartite open circular double-stranded DNA (dsDNA) genome with a length of 7325 bp. RNA interference (RNAi) is a natural mechanism that has revolutionized the target g
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7

Romay, Gustavo, Francis Geraud-Pouey, Dorys Chirinos, et al. "Tomato Twisted Leaf Virus: A Novel Indigenous New World Monopartite Begomovirus Infecting Tomato in Venezuela." Viruses 11, no. 4 (2019): 327. http://dx.doi.org/10.3390/v11040327.

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Begomoviruses are one of the major groups of plant viruses with an important economic impact on crop production in tropical and subtropical regions. The global spread of its polyphagous vector, the whitefly Bemisia tabaci, has contributed to the emergence and diversification of species within this genus. In this study, we found a putative novel begomovirus infecting tomato plants in Venezuela without a cognate DNA-B component. This begomovirus was genetically characterized and compared with related species. Furthermore, its infectivity was demonstrated by agroinoculation of infectious clones i
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8

Wang, Wei-Chen, Yau-Heiu Hsu, Na-Sheng Lin, Chia-Ying Wu, Yi-Chin Lai, and Chung-Chi Hu. "A Novel Prokaryotic Promoter Identified in the Genome of Some Monopartite Begomoviruses." PLoS ONE 8, no. 7 (2013): e70037. http://dx.doi.org/10.1371/journal.pone.0070037.

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9

Du, Min, Yongzhi Wang, Cheng Chen, et al. "Molecular Characterization and Pathogenicity of a Novel Soybean-Infecting Monopartite Geminivirus in China." Viruses 14, no. 2 (2022): 341. http://dx.doi.org/10.3390/v14020341.

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Soybean is a major legume crop that plays an important role in food production, industrial production, and animal husbandry. Here, we characterize a novel soybean-infecting monopartite geminivirus identified in China. Analysis of the contigs de novo assembled from sequenced small interfering RNAs, followed by PCR, cloning, and sequencing, the complete viral genome was determined to be 2782 nucleotides. The genome contains the conserved nonanucleotide sequence, TAATATTAC and other sequence features typical of the family Geminiviridae, and encodes two and four open reading frames in the virion-s
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10

Al Rwahnih, Maher, Olufemi J. Alabi, Nathaniel M. Westrick, Deborah Golino, and Adib Rowhani. "Description of a Novel Monopartite Geminivirus and Its Defective Subviral Genome in Grapevine." Phytopathology® 107, no. 2 (2017): 240–51. http://dx.doi.org/10.1094/phyto-07-16-0282-r.

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A novel virus was detected in grapevines by Illumina sequencing during the screening of two table grape (Vitis vinifera) accessions, cultivars Black Beet and Nagano Purple, from South Korea. The monopartite circular ssDNA genome sequence was subsequently confirmed by rolling cycle amplification, cloning and Sanger sequencing. The complete viral genomic sequence from both accessions ranged from 2,903 to 2,907 nucleotides in length and contained the conserved nonanucleotide sequence TAATATT↓AC and other sequence features typical of the family Geminiviridae, including two predicted sense and four
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Dissertations / Theses on the topic "Monopartite Genome"

1

Guha, Debojit. "Functional Characterization of C4 Protien of Cotton Leaf Curl Kokhran Virus - Dabawali." Thesis, 2012. http://etd.iisc.ac.in/handle/2005/3247.

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1) Geminiviruses are a group of plant viruses which contain circular single stranded DNA molecules as their genomes and the capsid consists of two icosahedra fused together to form twinned or geminate particles. The largest genus in the family Geminiviridae is that of begomoviruses which are of two kinds; the monopartite begomoviruses which contain only one circular single stranded DNA molecule as their genome and the bipartite begomoviruses which contain two circular single stranded DNA molecules (designated DNA-A and DNA-B) as their genomes. In bipartite viruses, the two DNA molecules are en
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2

Guha, Debojit. "Functional Characterization of C4 Protien of Cotton Leaf Curl Kokhran Virus - Dabawali." Thesis, 2012. http://hdl.handle.net/2005/3247.

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1) Geminiviruses are a group of plant viruses which contain circular single stranded DNA molecules as their genomes and the capsid consists of two icosahedra fused together to form twinned or geminate particles. The largest genus in the family Geminiviridae is that of begomoviruses which are of two kinds; the monopartite begomoviruses which contain only one circular single stranded DNA molecule as their genome and the bipartite begomoviruses which contain two circular single stranded DNA molecules (designated DNA-A and DNA-B) as their genomes. In bipartite viruses, the two DNA molecules are en
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Books on the topic "Monopartite Genome"

1

Renate, Koenig, ed. Polyhedral virions with monopartite RNA genomes. Plenum Press, 1988.

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2

Koenig, Renate. Plant Viruses: Polyhedral Virions with Monopartite RNA Genomes. Springer London, Limited, 2012.

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3

Koenig, Renate. The Plant Viruses: Polyhedral Virions With Monopartite Rna Genomes. Springer, 2011.

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4

The Plant Viruses: Polyhedral Virions with Monopartite RNA Genomes. Springer, 2011.

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5

The Plant Viruses Volume 3: Polyhedral Virions with Monopartite RNA Genomes (The Viruses). Springer, 1988.

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Book chapters on the topic "Monopartite Genome"

1

Koenig, R. "Polyhedral Plant Viruses with Monopartite RNA Genomes." In The Plant Viruses. Springer US, 1988. http://dx.doi.org/10.1007/978-1-4613-0921-5_1.

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2

Ryan, M. D., M. Flint, M. L. L. Donnelly, E. Byrne, and V. Cowton. "Analysis of RNA virus-encoded proteinases." In RNA Viruses. Oxford University PressOxford, 2000. http://dx.doi.org/10.1093/oso/9780199637171.003.0004.

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Abstract An extremely common strategy of positive-strand RNA viruses is to encode some, if not all, of their proteins in the form of polyproteins. Picoma-, flavi-, and potyviruses, for example, encode all their proteins in a single, long, open reading frame (ORF). Other viruses may have monopartite genomes encoding more than one polyprotein (e.g. togaviruses). Multipartite genomes are very common in plant viruses and each of the different RNA strands may also encode a polyprotein (e.g. bymo-, como-, nepoviruses).
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