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Dissertations / Theses on the topic 'Morganii 16s rdna analysis'

Author: Grafiati

Published: 3 June 2025

Last updated: 31 July 2025

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1

Ziegler, Katie. "Phylogenetic Analysis of a Group of Enteric Bacteria Based on 16S rDNA Gene Sequencing." Miami University Honors Theses / OhioLINK, 2004. http://rave.ohiolink.edu/etdc/view?acc_num=muhonors1111684418.

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2

Wood, Jacqueline. "Analysis of bacterial populations from the rumen by means of 16S rDNA directed oligonucleotides." Thesis, University of Aberdeen, 1997. http://digitool.abdn.ac.uk/R?func=search-advanced-go&find_code1=WSN&request1=AAIU100186.

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The overall aim of this work was to develop molecular based techniques that would allow the identification and quantification of Prevotella spp. in samples of rumen fluid. This was achieved by developing two methods, both based on PCR amplification of 16S rDNA extracted from rumen and faecal samples. The first method involved the amplification of microbial DNA with universal primers, followed by probing with either a Bacteroides Prevotella specific oligonucleotide (Bac/Pre) or a universal oligonucleotide. Comparison with control DNA extracted from pure cultures allowed the relative abundances

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3

Al, Masalma Mouhamad. "Molecular and cultural analysis of the bacterial flora associated with brain abscesses." Thesis, Aix-Marseille 2, 2011. http://www.theses.fr/2011AIX20663/document.

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Les abcès cérébraux sont des infections potentiellement mortelles, entraînant souvent des séquelles graves. La prise en charge médicale en reste empirique en raison d’un manque de connaissance approfondie des microorganismes responsables de cette condition. Dans la plupart des laboratoires microbiologiques, le diagnostic d’abcès cérébral est basé sur la culture du pus recueilli chirurgicalement. Malheureusement, cette procédure a de nombreuses limites et ne permet l’identification que d’une petite partie de la population microbienne en cause. L’amplification par PCR et le séquençage du gène co

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4

Fishman, Ross H. "The Molecular Analysis of the Biofilm of Proximal Incipient Caries in Young Permanent Teeth." The Ohio State University, 2009. http://rave.ohiolink.edu/etdc/view?acc_num=osu1244847351.

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5

Oberreuter, Helene. "FT-IR spectroscopic identification and infraspecific diversity of coryneform bacteria in relation to 16S rDNA sequence analysis." [S.l. : s.n.], 2001. http://deposit.ddb.de/cgi-bin/dokserv?idn=962146374.

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6

Mills, John. "Bacterial Community Analysis of Meat Industry Conveyor Belts." The University of Waikato, 2007. http://hdl.handle.net/10289/2236.

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At the commencement of this study, some sensitive overseas markets were rejecting chilled vacuum-packed New Zealand lamb due to higher than expected total viable counts, and counts of Enterobacteriaceae, a family of bacteria used to indicate sanitary condition. Of the many factors that influence the bacterial composition of chilled lamb in the overseas marketplace, the meat producer can only exert significant control over: Hygiene, ensuring the bacterial viable count on the meat prior to packaging is as low as possible, and comprised of as few species as possible that are capable of anaerobic

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7

MUNDELL, J. NICOLE. "PHYLOGENETIC ANALYSIS OF KENTUCKY STRAINS OF XYLELLA FASTIDIOSA." UKnowledge, 2005. http://uknowledge.uky.edu/gradschool_theses/406.

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Phytopathogenic bacterium, Xylella fastidiosa, causes a number of economically important diseases, including Pierces disease (PD) of grape and bacterial leaf scorch (BLS) of a number of landscape trees. In Kentucky (KY), BLS affects a number of shade trees including many oak and maple species. In 2001, PD was diagnosed in grapevines in western KY. Xylella fastidiosa is also detected in many asymptomatic landscape plants and grasses. It was the goal of this research to identify hosts of X. fastidiosa around KY and use phylogenetic analysis to compare sequences of the 16S rDNA and gyrase B (gyrB

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8

Walsh, Kerry A. "Characterising the microbial community associated with a constructed wetland treating landfill leachate at Pitsea landfill site using 16S rDNA analysis." Thesis, University of East London, 2002. http://ethos.bl.uk/OrderDetails.do?uin=uk.bl.ethos.274628.

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9

Safina, Melania. "DNA barcoding of Pleuronectiformes: in silico analysis and development of markers." Master's thesis, Alma Mater Studiorum - Università di Bologna, 2016. http://amslaurea.unibo.it/12259/.

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DNA barcoding is a method used for the identification and discovery of animal species. It usually involved a 648 base pair fragment of the mitochondrial cytochrome c oxidase subunit I, known as COI. This work is focused on the study of the genetic identification in the families belonging to the order Pleuronectiformes, commonly known as flatfish, and the accuracy of the genetic marker most used for the study of their DNA barcodes. The results indicate possible existence of taxonomical mistakes because several families do not show a gap between maximum intraspecific distance - which is the maxi

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10

Roth, McKenzie L. "Analysis of Bacterial Abundance and Species Diversity in Various Soils." Ashland University Honors Theses / OhioLINK, 2012. http://rave.ohiolink.edu/etdc/view?acc_num=auhonors1355166102.

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11

Floresta, Fernanda Arruda. "Análise de região codificadora de rRNA de Lactobacillus delbrueckii UFV H2b20: Filogenia e presença de seqüência de inserção putativa." Universidade Federal de Viçosa, 2003. http://locus.ufv.br/handle/123456789/5295.

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Made available in DSpace on 2015-03-26T13:51:43Z (GMT). No. of bitstreams: 1 texto completo.pdf: 248917 bytes, checksum: 84bc05c660ca867229222e12c0fa08ec (MD5) Previous issue date: 2003-03-31<br>Fundação de Amparo a Pesquisa do Estado de Minas Gerais<br>Phylogenetic analysis of Lactobacillus UFV H2b20 based on the 16S rDNA sequence positions this isolate among the Lactobacillus delbrueckii subspecies. It confirms the classification by DNA/DNA hybridization. Comparisons of the substituted bases along the 16S rDNA sequence show that most are probably caused by 5-methylcytosine deamination that

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12

Kanasi, Eleni. "Molecular analysis of the oral microbiota of dental diseases." Doctoral thesis, Umeå : Oral Microbiology, Department of Odontology, Umeå University, 2008. http://urn.kb.se/resolve?urn=urn:nbn:se:umu:diva-1911.

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13

Zierold, Thorid. "Morphological variation and genetic diversity of Triops cancriformis (Crustacea: Notostraca) and their potential for understanding the influence of postglacial distribution and habitat fragmentation." Doctoral thesis, Technische Universitaet Bergakademie Freiberg Universitaetsbibliothek "Georgius Agricola&quot, 2009. http://nbn-resolving.de/urn:nbn:de:swb:105-7497276.

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Triops cancriformis (Crustacea: Notostraca) occurs in ephemeral habitats like rain pools or floodplain pools distributed over a large geographical range. The named habitats are disturbed by human impacts and, consequently, T. cancriformis is endangered throughout its distribution range. In the present thesis the populated habitats and threats are characterised and further morphological and genetic variations detected among and within European populations are reported. On the basis of recent investigations it is shown that T. cancriformis subspecies separation is hampered by an individual varia

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14

Boi-Wei, Lue, and 呂柏緯. "Molecular and Phylogenetic Analysis of Mitochondrial 16S rDNA of Pscherid Spiders." Thesis, 1998. http://ndltd.ncl.edu.tw/handle/01184414107556476901.

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碩士<br>國立師範大學<br>生物學研究所<br>86<br>Psechrid spiders are the largest among six cribellate families in Taiwan. They are characterized by their funnel webs of more than a meter wide and carry their eggs with chelicera. Among them, the Psechridae are born with nursery nature and grate-shaped tapetum eye structures, which are typical of the acribellate spiders. Levi (1982) hypothesized that Psechridae is close to acribellate spiders, e.g. Lycosidae, Pisauridae, Ctenidae and Oxyopidae. Furthermore, Coddington and Levi (1991) grouped them together as Lycosoidae superfamily based on their common features

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15

Kock, Martha Magdalena. "Characterization and identification of some indigenous Rhizobia using 16S rDNA sequence analysis." Diss., 1999. http://hdl.handle.net/2263/30155.

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ENGLISH : The use of different characteristics (the polyphasic approach) to describe bacterial taxa is a prerequisite for a stable classification. The taxonomy of root- and stem-nodulating rhizobia is in a state of transition. As more legumes are studied, new species and genera of rhizobia are described. It is important to study the indigenous South African rhizobia, as without them a complete rhizobial taxonomy is not possible. Furthermore, strains with superior nitrogen fixation abilities may be discovered. Indigenous strains better adapted to the harsh South African environment are possible

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16

Lu, Jingrang. "Statistical analysis of 16S rDNA gene-based intestinal bacterial communities of the chicken fed with different diets." 2003. http://purl.galileo.usg.edu/uga%5Fetd/lu%5Fjingrang%5F200312%5Fms.

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17

Oberreuter, Helene [Verfasser]. "FT-IR spectroscopic identification and infraspecific diversity of coryneform bacteria in relation to 16S rDNA sequence analysis / Helene Oberreuter." 2001. http://d-nb.info/962146374/34.

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18

Jones, Thomas E. "A descriptive analysis of the waterways in Coos Bay Oregon on the basis of general, ruminant and human Bacteroides-Prevotella 16S rDNA markers." Thesis, 2003. http://hdl.handle.net/1957/31527.

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We explain a new method of detecting non point source fecal contamination using a PCR based method called Touchdown Polymerase Chain Reaction (TD-PCR). Using genetic markers particular to general, ruminant and human Bacteroides- Prevotella genes, we identified presence in both fresh and salt water environments. Water samples from four sites were collected at approximate 2-week intervals for a year. Samples were analyzed for total coliforms, fecal coliforms, E. coli, and the presence of general, ruminant and human Bacteroides-Prevotella markers. We compared the odds of recovering each PCR marke

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19

Chia-Wen, Cheng, and 鄭嘉雯. "Using of conjugation method, enterotoxin gene detection and 16S-23S rDNA ITS sequence analysis to study the phylogenetic relationship between B. cereus and B. thuringiensis." Thesis, 2001. http://ndltd.ncl.edu.tw/handle/21559640910137020802.

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碩士<br>國立中興大學<br>食品科學系<br>89<br>In this research, plasmid pBTIAb was the marker in mating experiment, while strain BT16Te was the donor. The results showed that plasmid was conjugally transferable between B. cereus and B. thuringiensis. B. cereus is food-poisoning for it''s production of hemolysin BL(HBL) and non-hemolytic enterotoxin (NHE). This research adopted primer sets hblA1/hblA2, nheB1500S/nheB2269A, and nheC2820S/nheC3401A, as well as, from this Lab, sets of L2F/L2b, L1b/L1F and nheaF/nheaR. Via polymerase chain reaction (PCR), 79 strains of B. thuringiensis from diffe

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20

VODIČKA, Tomáš. "Molekulární identifikace a fylogeneze produkčních kmenů \kur{Chlorella} spp. používaných v řasových biotechnologiích." Master's thesis, 2010. http://www.nusl.cz/ntk/nusl-86130.

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Green algae are quite important primary producers in fresh waters. The genus Chlorella represents one of algae most frequently utilized in algal biotechnologies to produce biomass, using either autotrophic or heterotrophic cultivation systems. It is than exploited as a food supplement for humans or animals. However, particular species within the genus are morphologically indistinguishable and molecular markers should be used to characterize production strains. This work is aimed to molecularly characterize three production strains of Chlorella for patent protection purposes and to specify thei

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21

Wei, Yu-Fang, and 魏郁芳. "Construction of a Sequence Database of 16S-23S rDNA Spacer (ITS) of Nonfermentative Gram-Negative Bacilli and Identification of Acinetobacter calcoaceticus-Acinetobacter baumannii (Acb) Complex by ITS Sequence Analysis." Thesis, 2003. http://ndltd.ncl.edu.tw/handle/61532068069944098440.

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碩士<br>國立成功大學<br>醫學工程研究所<br>91<br>Members of the genus Acinetobacter and other nonfermentative gram-negative bacteria are clinically important pathogens. However, clinical laboratories still lack simple methods that allow accurate identification of these species. For example, species of the Acinetobacter calcoaceticus— Acinetobacter baumannii complex (Acb complex) that includes Acinetobacter calcoaceticus (genospecies 1), A. baumannii (genospecies 2), unnamed genospecies 3 and 13TU are difficult to be differentiated. In fact, a complete discrimination between these species is possible only by D

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22

Zierold, Thorid. "Morphological variation and genetic diversity of Triops cancriformis (Crustacea: Notostraca) and their potential for understanding the influence of postglacial distribution and habitat fragmentation." Doctoral thesis, 2006. https://tubaf.qucosa.de/id/qucosa%3A22547.

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Abstract:

Triops cancriformis (Crustacea: Notostraca) occurs in ephemeral habitats like rain pools or floodplain pools distributed over a large geographical range. The named habitats are disturbed by human impacts and, consequently, T. cancriformis is endangered throughout its distribution range. In the present thesis the populated habitats and threats are characterised and further morphological and genetic variations detected among and within European populations are reported. On the basis of recent investigations it is shown that T. cancriformis subspecies separation is hampered by an individual varia

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23

浅川, 晋. "水田土壌の主要なメタン生成古細菌群の解析". 2004. http://hdl.handle.net/2237/13126.

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